Diff of the two buildlogs: -- --- b1/build.log 2024-11-07 20:07:20.397063741 +0000 +++ b2/build.log 2024-11-08 03:53:38.135367379 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Nov 7 05:21:17 -12 2024 -I: pbuilder-time-stamp: 1731000077 +I: Current time: Fri Nov 8 10:17:47 +14 2024 +I: pbuilder-time-stamp: 1731010667 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -48,52 +48,84 @@ dpkg-source: info: applying big_endian_workaround I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/22436/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/12340/tmp/hooks/D01_modify_environment starting +debug: Running on ff4a. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 7 20:19 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/12340/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/12340/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='68a00c068d7c43d6a58a769170a99711' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='22436' - PS1='# ' - PS2='> ' + INVOCATION_ID=9870f1f18c2a407d92663139ef03d0f5 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=12340 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.wzZQsQXX/pbuilderrc_LgPz --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.wzZQsQXX/b1 --logfile b1/build.log ncbi-blast+_2.16.0+ds-6.dsc' - SUDO_GID='113' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.wzZQsQXX/pbuilderrc_bCQc --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.wzZQsQXX/b2 --logfile b2/build.log ncbi-blast+_2.16.0+ds-6.dsc' + SUDO_GID=113 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt64c 6.1.0-26-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-26-armmp-lpae #1 SMP Debian 6.1.112-1 (2024-09-30) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/22436/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/12340/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -223,7 +255,7 @@ Get: 66 http://deb.debian.org/debian trixie/main armhf libuv1-dev armhf 1.48.0-6 [170 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf time armhf 1.9-0.2 [50.9 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1+b1 [905 kB] -Fetched 42.4 MB in 3s (15.0 MB/s) +Fetched 42.4 MB in 9s (4813 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19690 files and directories currently installed.) @@ -510,7 +542,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ncbi-blast+_2.16.0+ds-6_source.changes +I: user script /srv/workspace/pbuilder/12340/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/12340/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ncbi-blast+_2.16.0+ds-6_source.changes dpkg-buildpackage: info: source package ncbi-blast+ dpkg-buildpackage: info: source version 2.16.0+ds-6 dpkg-buildpackage: info: source distribution unstable @@ -541,79 +577,79 @@ done ) ; \ ) ; \ done -/bin/sh: 2: cd: can't cd to c++/src/objects/CMakeLists.txt -/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in -/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd -/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found +/bin/sh: line 2: cd: c++/src/objects/CMakeLists.txt: Not a directory +/bin/sh: line 2: cd: c++/src/objects/Makefile.in: Not a directory +/bin/sh: line 2: cd: c++/src/objects/Makefile.sources: Not a directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 2: cd: c++/src/objects/nt_sources.cmd: Not a directory +/bin/sh: line 2: cd: c++/src/objects/nt_sources.sh: Not a directory +/bin/sh: line 6: 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override_dh_clean] Error 127 (ignored) for x in c++/src/objtools/eutils/* ; do \ (cd "$x" && ( \ @@ -624,23 +660,23 @@ done ) ; \ ) ; \ done -/bin/sh: 2: cd: can't cd to c++/src/objtools/eutils/CMakeLists.txt -/bin/sh: 2: cd: can't cd to c++/src/objtools/eutils/Makefile.in -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found +/bin/sh: line 2: cd: c++/src/objtools/eutils/CMakeLists.txt: Not a directory +/bin/sh: line 2: cd: c++/src/objtools/eutils/Makefile.in: Not a directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: 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override_dh_clean] Error 127 (ignored) cd c++/src/objtools/eutils/efetch && \ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --xsd efetch purge_sources -/bin/sh: 2: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found +/bin/sh: line 2: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory make[1]: [debian/rules:180: override_dh_clean] Error 127 (ignored) rm -rf c++/compilers/dll c++/config.log c++/Makefile rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module @@ -678,8 +714,8 @@ checking TeamCity build number... none checking VCS revision... unknown checking NCBI stable components' version... unknown -checking build system type... aarch64-unknown-linux-gnu -checking host system type... aarch64-unknown-linux-gnu +checking build system type... armv7l-unknown-linux-gnueabihf +checking host system type... armv7l-unknown-linux-gnueabihf checking for a BSD-compatible install... /usr/bin/install -c checking for gcc... gcc checking whether the C compiler works... yes @@ -691,7 +727,7 @@ checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E -checking for aarch64-unknown-linux-gnu-gcc... no +checking for armv7l-unknown-linux-gnueabihf-gcc... no checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes @@ -1221,234 +1257,234 @@ configure: ...done configure: updating cache config.cache configure: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/config.status +config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/jsonwrapp/Makefile +config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/jsonwrapp/test/Makefile +config.status: creating 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-config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/grpc_integration/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/Makefile +config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask/Makefile +config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask/Makefile config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/./Makefile config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc/common/ncbi_build_ver.h config.status: creating /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/common/ncbi_revision.h @@ -1911,2319 +1947,2204 @@ debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds' cd c++/BUILD/build && \ - make -j3 -f Makefile.flat all_projects="algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/" + make -j4 -f Makefile.flat all_projects="algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/" make[2]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -/usr/bin/make -w -j3 --jobserver-auth=3,4 -f Makefile.flat ptb_all.real MTARGET= +/usr/bin/make -w -j4 --jobserver-auth=3,4 -f Makefile.flat ptb_all.real MTARGET= make[3]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[3]: warning: -j3 forced in submake: resetting jobserver mode. -cd corelib/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -cd util/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -cd serial/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[3]: warning: -j4 forced in submake: resetting jobserver mode. +cd corelib/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +cd util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd serial/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd serial/datatool/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' /usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -w -j4 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `flag-stamps'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -cd serial/datatool/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' /usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +cd util/tables/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `flag-stamps'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `flag-stamps'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=cserial -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `flag-stamps'. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -cd util/tables/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -cd connect/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -cd algo/blast/core/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd connect/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -w -j4 --jobserver-auth=7,8 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `flag-stamps'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=cserial -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `flag-stamps'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +cd algo/blast/core/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `flag-stamps'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' /usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -w -j3 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +cd util/sequtil/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -cd util/sequtil/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +cd objtools/blast/services/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -cd objtools/blast/services/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' /usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' /usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +cd db/sqlite/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xxconnect2.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -w -j4 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.sqlitewrapp.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -cd db/sqlite/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd objmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -cd objmgr/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connssl -w -j3 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.sqlitewrapp.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connssl -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' /usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connect -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +cd objtools/logging/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -cd objtools/logging/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j4 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.logging.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -cd objtools/readers/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connect -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +cd objtools/readers/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +cd objmgr/util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -w -j3 --jobserver-auth=7,8 flag-stamps -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -cd objmgr/util/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' /usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +cd objtools/seqmasks_io/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' /usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjread -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjread -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -cd objtools/seqmasks_io/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +cd util/profile/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjreadex -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -cd util/profile/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -cd algo/blast/dbindex/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.utrtprof.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +cd algo/blast/dbindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjreadex -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -cd algo/dustmask/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.utrtprof.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -w -j4 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +cd algo/dustmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +cd algo/winmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' /usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -cd algo/winmask/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -cd objtools/alnmgr/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +cd objtools/alnmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -cd algo/blast/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +cd algo/blast/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api TMPL=xblast -w -j3 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -cd util/compress/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +/usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +cd util/compress/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api TMPL=xblast -w -j4 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -cd connect/services/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j4 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'. -cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -/usr/bin/make[4] (Makefile.xconnserv.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +cd connect/services/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make[4] (Makefile.psg_client.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.ncbi_xcache_netcache.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +/usr/bin/make[4] (Makefile.xconnserv.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -cd cgi/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +cd cgi/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.ncbi_xblobstorage_netcache.lib): Nothing to be done for `export-headers'. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/make[4] (Makefile.psg_client.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -cd html/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +/usr/bin/make[4] (Makefile.ncbi_xcache_netcache.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=xconnserv -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.ncbi_xblobstorage_netcache.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/FASTCGIPP.enabled', needed by 'requirements'. Stop. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' NOTE: skipping project "fcgi_mt" due to unmet requirements +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +cd html/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +cd objtools/align_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=xconnserv -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xcache_netcache -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -cd objtools/align_format/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=fcgi -w -j3 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xblobstorage_netcache -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/FASTCGIPP.enabled', needed by 'requirements'. Stop. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -w -j3 --jobserver-auth=7,8 flag-stamps -NOTE: skipping project "fcgi_mt" due to unmet requirements make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xcache_netcache -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=fcgi -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -cd connect/ext/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/FASTCGIPP.enabled', needed by 'requirements'. Stop. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +NOTE: skipping project "fcgi_mt" due to unmet requirements +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xblobstorage_netcache -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/make[4] (Makefile.connext.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xconnext.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +cd connect/ext/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -cd algo/blast/blastinput/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd algo/blast/blastinput/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +cd objtools/eutils/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=connext -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +/usr/bin/make[4] (Makefile.connext.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/make[4] (Makefile.eutils.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xconnext.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=connext -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -cd objtools/eutils/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -cd algo/blast/proteinkmer/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd algo/blast/proteinkmer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -/usr/bin/make[4] (Makefile.eutils.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -cd util/xregexp/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +cd util/xregexp/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +cd objtools/edit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources /usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' /usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j3 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -cd objtools/edit/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.edit.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `flag-stamps'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `flag-stamps'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -cd objtools/cleanup/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +cd objtools/cleanup/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `flag-stamps'. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make[4] (Makefile.edit.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -cd objtools/format/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'. +cd objtools/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +cd algo/blast/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -cd algo/blast/format/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -w -j3 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format TMPL=xblastformat -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format TMPL=xblastformat -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +cd algo/blast/igblast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -cd algo/blast/igblast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -cd objtools/simple/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j3 --jobserver-auth=7,8 flag-stamps +cd objtools/simple/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -/usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +/usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j3 --jobserver-auth=9,10 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j4 --jobserver-auth=9,10 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/legacy_blast.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j3 --jobserver-auth=9,10 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j4 --jobserver-auth=9,10 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/update_blastdb.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j3 --jobserver-auth=9,10 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j4 --jobserver-auth=9,10 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/get_species_taxids.sh make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -cd app/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j3 --jobserver-auth=9,10 all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j4 --jobserver-auth=9,10 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/cleanup-blastdb-volumes.py make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' /usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +cd app/dustmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j4 --jobserver-auth=7,8 flag-stamps +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -w -j3 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +cd algo/segmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -w -j3 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +cd app/segmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -w -j3 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +cd app/winmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -w -j4 --jobserver-auth=7,8 flag-stamps +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker -w -j4 --jobserver-auth=9,10 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/windowmasker_2.2.22_adapter.py +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -w -j3 --jobserver-auth=7,8 flag-stamps -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd app/dustmasker/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +cd objmgr/split/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -w -j3 --jobserver-auth=7,8 flag-stamps -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/segmask/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -cd app/segmasker/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -cd app/winmasker/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker -w -j3 --jobserver-auth=9,10 all -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/windowmasker_2.2.22_adapter.py -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd objmgr/split/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -cd objtools/align_format/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +cd objtools/align_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j3 --jobserver-auth=7,8 flag-stamps +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j3 --jobserver-auth=7,8 flag-stamps +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -cd corelib/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null +cd corelib/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -cd util/tables/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +cd util/tables/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j3 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c:137:1: warning: 's_CompoHeapIsValid' defined but not used [-Wunused-function] 137 | s_CompoHeapIsValid(BlastCompo_HeapRecord * heapArray, int i, int n) | ^~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +cd connect/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o -/bin/rm -f libtables.so .libtables.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libtables.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC raw_scoremat.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtables.so -/bin/ln -f .tables.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.tables.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -cd connect/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function] - 200 | s_DistinctAlignmentsLength(BlastCompo_Alignment * list) - | ^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function] - 185 | s_AlignmentsAreSorted(BlastCompo_Alignment * alignments) - | ^~~~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -w -j4 --jobserver-auth=7,8 all /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/.#lock-map. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.h:39, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:36: @@ -4233,6 +4154,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function] + 200 | s_DistinctAlignmentsLength(BlastCompo_Alignment * list) + | ^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function] + 185 | s_AlignmentsAreSorted(BlastCompo_Alignment * alignments) + | ^~~~~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:37: @@ -4514,7 +4443,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:622:17: note: in expansion of macro 'CORE_LOGF_X' 622 | CORE_LOGF_X(2, eLOG_Warning, | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4545,6 +4473,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:647:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 647 | CORE_LOGF_ERRNO_X(21, eLOG_Warning, errno, | ^~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:37: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c: In function 'LBSM_LookupService': @@ -4563,31 +4499,54 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:120:9: note: in expansion of macro 'CORE_LOG_X' 120 | CORE_LOG_X(1, eLOG_Error, "Invalid preceding entry in service lookup"); | ^~~~~~~~~~ -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c -o ncbi_lbsm.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c -o ncbi_lbsm_ipc.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_types.c -o ncbi_types.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core.c -o ncbi_core.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/shar/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/sharmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o +/bin/rm -f libtables.so .libtables.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libtables.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC raw_scoremat.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtables.so +/bin/ln -f .tables.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.tables.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +cd util/sequtil/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j4 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c:34: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c: In function 'CORE_SetLOGFILE_NAME_Ex': @@ -4606,38 +4565,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c:168:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 168 | CORE_LOGF_ERRNO_X(1, eLOG_Error, errno, | ^~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:77: @@ -4725,6 +4660,7 @@ | | | | | FSSLSetup {aka const struct SOCKSSL_struct * (*)(void)} | void * +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4771,27 +4707,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1121:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' 1121 | CORE_LOG_ERRNO_EXX(103, eLOG_Error, | ^~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:34: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' - 41 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG' - 63 | METACONN_LOG(34, eLOG_Error, - | ^~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4807,25 +4722,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1130:13: note: in expansion of macro 'CORE_LOGF_X' 1130 | CORE_LOGF_X(104, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' - 41 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG' - 92 | METACONN_LOG(33, connector->next ? eLOG_Error : eLOG_Critical, - | ^~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4841,6 +4737,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1138:13: note: in expansion of macro 'CORE_LOGF_X' 1138 | CORE_LOGF_X(162, eLOG_Error, | ^~~~~~~~~~~ +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5000,6 +4897,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2157:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 2157 | CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno, | ^~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5015,12 +4914,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2289:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 2289 | CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ -e/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.c -o ncbi_priv.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c -o ncbi_util.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c -o ncbi_socket.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c -o ncbi_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_': +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5082,18 +4982,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3054:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 3054 | CORE_LOGF_ERRNO_EXX(7, eLOG_Trace, | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Read_': -ebra.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o -/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blas/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -5108,11 +4998,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3238:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 3238 | CORE_LOGF_ERRNO_X(8, eLOG_Critical, errno, | ^~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Send': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5129,8 +5015,6 @@ 3615 | CORE_LOGF_ERRNO_EXX(11, eLOG_Trace, | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_WritePending': -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5147,9 +5031,6 @@ 3780 | CORE_LOGF_ERRNO_EXX(12, sock->log != eOff | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Write_': -t+-2.16.0+ds/c++/BUILD/lib/libcomposition_adjustment.so -/bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.composition_adjustment.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5196,7 +5077,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3998:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 3998 | CORE_LOGF_ERRNO_EXX(127, eLOG_Trace, | ^~~~~~~~~~~~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5212,7 +5093,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4049:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 4049 | CORE_LOGF_ERRNO_EXX(16, eLOG_Trace, | ^~~~~~~~~~~~~~~~~~~ -cd util/sequtil/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Close_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5229,8 +5109,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4130:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 4130 | CORE_LOGF_ERRNO_EXX(17, eLOG_Trace, | ^~~~~~~~~~~~~~~~~~~ -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5261,6 +5139,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4208:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 4208 | CORE_LOGF_ERRNO_EXX(19, eLOG_Trace, | ^~~~~~~~~~~~~~~~~~~ +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5322,7 +5201,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4408:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 4408 | CORE_LOGF_ERRNO_EXX(23, eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5354,6 +5232,448 @@ 4481 | CORE_LOGF_ERRNO_EXX(135, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:34: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4526:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4526 | CORE_LOGF_ERRNO_EXX(131, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' + 41 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG' + 63 | METACONN_LOG(34, eLOG_Error, + | ^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' + 41 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG' + 92 | METACONN_LOG(33, connector->next ? eLOG_Error : eLOG_Critical, + | ^~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4574:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4574 | CORE_LOGF_ERRNO_EXX(25, sock->log != eOff + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4616:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4616 | CORE_LOGF_ERRNO_EXX(26, sock->log != eOff + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Create': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4724:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 4724 | CORE_LOGF_ERRNO_X(27, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4787:9: note: in expansion of macro 'CORE_LOGF_X' + 4787 | CORE_LOGF_X(47, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4845:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4845 | CORE_LOGF_ERRNO_EXX(148, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4889:17: note: in expansion of macro 'CORE_LOGF_X' + 4889 | CORE_LOGF_X(48, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4938:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4938 | CORE_LOGF_ERRNO_EXX(50, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +e/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.c -o ncbi_priv.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c -o ncbi_util.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c -o ncbi_socket.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c -o ncbi_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4955:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 4955 | CORE_LOGF_ERRNO_X(49, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5043:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5043 | CORE_LOGF_ERRNO_EXX(132, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5065:17: note: in expansion of macro 'CORE_LOGF' + 5065 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5094:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5094 | CORE_LOGF_ERRNO_EXX(153, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5105:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5105 | CORE_LOGF_ERRNO_EXX(138, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5128:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5128 | CORE_LOGF_ERRNO_EXX(124, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5146:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5146 | CORE_LOGF_ERRNO_EXX(43, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateListening': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5220:13: note: in expansion of macro 'CORE_LOGF_X' + 5220 | CORE_LOGF_X(144, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5262:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5262 | CORE_LOGF_ERRNO_EXX(34, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5307:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5307 | CORE_LOGF_ERRNO_EXX(35, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5362:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5362 | CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5389:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5389 | CORE_LOGF_ERRNO_EXX(150, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5459:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5459 | CORE_LOGF_ERRNO_EXX(37, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5521:9: note: in expansion of macro 'CORE_LOGF_X' + 5521 | CORE_LOGF_X(115, eLOG_Note, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Accept': +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5558:9: note: in expansion of macro 'CORE_LOGF_X' + 5558 | CORE_LOGF_X(39, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5613:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5613 | CORE_LOGF_ERRNO_EXX(40, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5738:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5738 | CORE_LOGF_ERRNO_EXX(42, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:34: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'x_ReInit': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] @@ -5383,6 +5703,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5748:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5748 | CORE_LOGF_ERRNO_EXX(152, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -5441,6 +5776,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:405:9: note: in expansion of macro 'CONN_LOG' 405 | CONN_LOG(5, Open, eLOG_Error, "Failed to open connection"); | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_CreateEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5453,10 +5789,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4526:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4526 | CORE_LOGF_ERRNO_EXX(131, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5759:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5759 | CORE_LOGF_ERRNO_EXX(137, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_CreateEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5509,21 +5844,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4574:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4574 | CORE_LOGF_ERRNO_EXX(25, sock->log != eOff - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -5585,6 +5905,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro 'CONN_NOT_NULL_EX' 477 | CONN_NOT_NULL_EX(6, GetType, 0); | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CloseListening': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Description': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5592,23 +5913,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4616:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4616 | CORE_LOGF_ERRNO_EXX(26, sock->log != eOff - | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -5645,7 +5949,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:486:5: note: in expansion of macro 'CONN_NOT_NULL_EX' 486 | CONN_NOT_NULL_EX(7, Description, 0); | ^~~~~~~~~~~~~~~~ -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_GetPosition': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5656,8 +5959,22 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion ofmake[5]: warning: -j3 forced in submake: resetting jobserver mode. - macro 'DO_CORE_LOG' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5822:9: note: in expansion of macro 'CORE_LOGF_X' + 5822 | CORE_LOGF_X(44, eLOG_Note, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' @@ -5669,7 +5986,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:498:5: note: in expansion of macro 'CONN_NOT_NULL_EX' 498 | CONN_NOT_NULL_EX(30, GetPosition, 0); | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Create': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5709,25 +6025,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:511:9: note: in expansion of macro 'CONN_LOG_EX' 511 | CONN_LOG_EX(31, GetPosition, eLOG_Error, errbuf, 0); | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4724:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 4724 | CORE_LOGF_ERRNO_X(27, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_SetTimeout': -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5752,7 +6050,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:527:5: note: in expansion of macro 'CONN_NOT_NULL' 527 | CONN_NOT_NULL(8, SetTimeout); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5783,15 +6080,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4787:9: note: in expansion of macro 'CORE_LOGF_X' - 4787 | CORE_LOGF_X(47, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5848:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5848 | CORE_LOGF_ERRNO_EXX(45, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5810,14 +6107,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:567:9: note: in expansion of macro 'CONN_LOG_EX' 567 | CONN_LOG_EX(9, SetTimeout, eLOG_Error, errbuf, eIO_InvalidArg); | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:37: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_GetTimeout': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5861,6 +6150,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:583:5: note: in expansion of macro 'CONN_NOT_NULL_EX' 583 | CONN_NOT_NULL_EX(10, GetTimeout, 0); | ^~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5885,21 +6176,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4845:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4845 | CORE_LOGF_ERRNO_EXX(148, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -5925,6 +6201,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5942:17: note: in expansion of macro 'CORE_LOGF_X' + 5942 | CORE_LOGF_X(20, eLOG_Critical, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' 72 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ @@ -5973,21 +6264,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4889:17: note: in expansion of macro 'CORE_LOGF_X' - 4889 | CORE_LOGF_X(48, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' 72 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ @@ -6004,21 +6280,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4938:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4938 | CORE_LOGF_ERRNO_EXX(50, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6040,6 +6301,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5995:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5995 | CORE_LOGF_ERRNO_EXX(94, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6055,21 +6331,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:735:13: note: in expansion of macro 'CONN_LOG' 735 | CONN_LOG(17, Write, level, "Unable to write data"); | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4955:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 4955 | CORE_LOGF_ERRNO_X(49, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Write': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6095,6 +6356,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro 'CONN_NOT_NULL' 784 | CONN_NOT_NULL(18, Write); | ^~~~~~~~~~~~~ +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6119,6 +6381,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro 'CONN_NOT_NULL' 784 | CONN_NOT_NULL(18, Write); | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_SendMsg': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Pushback': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6156,6 +6419,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6042:9: note: in expansion of macro 'CORE_LOGF_X' + 6042 | CORE_LOGF_X(88, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' 72 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ @@ -6168,21 +6446,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:818:5: note: in expansion of macro 'CONN_NOT_NULL' 818 | CONN_NOT_NULL(19, Pushback); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5043:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5043 | CORE_LOGF_ERRNO_EXX(132, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Flush': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6244,16 +6507,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' - 72 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:83:39: note: in expansion of macro 'CONN_LOG_EX' - 83 | #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:853:9: note: in expansion of macro 'CONN_LOG' - 853 | CONN_LOG(21, Flush, status == eIO_Timeout ? eLOG_Trace : eLOG_Warning, - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 's_CONN_Read': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6051:9: note: in expansion of macro 'CORE_LOGF_X' + 6051 | CORE_LOGF_X(89, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6263,12 +6519,19 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5065:17: note: in expansion of macro 'CORE_LOGF' - 5065 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' + 72 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:83:39: note: in expansion of macro 'CONN_LOG_EX' + 83 | #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:853:9: note: in expansion of macro 'CONN_LOG' + 853 | CONN_LOG(21, Flush, status == eIO_Timeout ? eLOG_Trace : eLOG_Warning, + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 's_CONN_Read': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6290,10 +6553,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:877:9: note: in expansion of macro 'CONN_LOG' 877 | CONN_LOG(22, Read, eLOG_Critical, "Cannot read data"); | ^~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'x_SetupHttpProxy': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6306,9 +6565,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:554:9: note: in expansion of macro 'CORE_LOGF_X' - 554 | CORE_LOGF_X(10, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' + 72 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:919:17: note: in expansion of macro 'CONN_LOG_EX' + 919 | CONN_LOG_EX(32, Read, eLOG_Critical, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6321,11 +6583,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' - 72 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:919:17: note: in expansion of macro 'CONN_LOG_EX' - 919 | CONN_LOG_EX(32, Read, eLOG_Critical, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6108:17: note: in expansion of macro 'CORE_LOGF_X' + 6108 | CORE_LOGF_X(90, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6348,22 +6607,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:946:13: note: in expansion of macro 'CONN_LOG' 946 | CONN_LOG(23, Read, level, "Unable to read data"); | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_CreateInternal': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:745:9: note: in expansion of macro 'CORE_LOGF_X' - 745 | CORE_LOGF_X(11, eLOG_Error, - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Read': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6371,21 +6614,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5094:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5094 | CORE_LOGF_ERRNO_EXX(153, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6416,21 +6644,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:822:13: note: in expansion of macro 'CORE_LOGF_X' - 822 | CORE_LOGF_X(12, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' 72 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ @@ -6443,6 +6656,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1003:5: note: in expansion of macro 'CONN_NOT_NULL' 1003 | CONN_NOT_NULL(24, Read); | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_ReadLine': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6455,10 +6669,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5105:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5105 | CORE_LOGF_ERRNO_EXX(138, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6159:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 6159 | CORE_LOGF_ERRNO_EXX(91, eLOG_Trace, | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_ReadLine': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6494,8 +6707,7 @@ | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j3 --jobserver-auth=7,8 all - ^~~~~~~~~~~ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' 72 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ @@ -6508,21 +6720,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1056:5: note: in expansion of macro 'CONN_NOT_NULL' 1056 | CONN_NOT_NULL(25, ReadLine); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5128:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5128 | CORE_LOGF_ERRNO_EXX(124, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6548,21 +6746,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5146:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5146 | CORE_LOGF_ERRNO_EXX(43, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6587,6 +6770,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6213:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6213 | CORE_LOGF_ERRNO_X(28, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6605,7 +6803,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1120:5: note: in expansion of macro 'CONN_NOT_NULL' 1120 | CONN_NOT_NULL(26, Status); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateListening': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Close': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6613,6 +6810,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6241:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6241 | CORE_LOGF_ERRNO_X(143, eLOG_Warning, err, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6643,21 +6855,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5220:13: note: in expansion of macro 'CORE_LOGF_X' - 5220 | CORE_LOGF_X(144, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' 72 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ @@ -6670,6 +6867,23 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1166:5: note: in expansion of macro 'CONN_NOT_NULL' 1166 | CONN_NOT_NULL(27, Close); | ^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6284:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6284 | CORE_LOGF_ERRNO_X(30, eLOG_Warning, err, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_SetCallback': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6695,6 +6909,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1186:5: note: in expansion of macro 'CONN_NOT_NULL' 1186 | CONN_NOT_NULL(28, SetCallback); | ^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6731,28 +6947,30 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' - 72 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1192:9: note: in expansion of macro 'CONN_LOG_EX' - 1192 | CONN_LOG_EX(29, SetCallback, eLOG_Error, errbuf, eIO_InvalidArg); - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6303:13: note: in expansion of macro 'CORE_LOGF_X' + 6303 | CORE_LOGF_X(116, eLOG_Note, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5262:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5262 | CORE_LOGF_ERRNO_EXX(34, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' + 72 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1192:9: note: in expansion of macro 'CONN_LOG_EX' + 1192 | CONN_LOG_EX(29, SetCallback, eLOG_Error, errbuf, eIO_InvalidArg); + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_GetSOCK': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close': +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6777,6 +6995,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1218:5: note: in expansion of macro 'CONN_NOT_NULL' 1218 | CONN_NOT_NULL(36, GetSOCK); | ^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6807,498 +7027,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5307:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5307 | CORE_LOGF_ERRNO_EXX(35, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5362:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5362 | CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:137:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 137 | LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2140:9: note: in expansion of macro 'LOG_WRITE' - 2140 | LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5389:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5389 | CORE_LOGF_ERRNO_EXX(150, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2359:9: note: in expansion of macro 'CORE_LOG_X' - 2359 | CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)"); - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5459:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5459 | CORE_LOGF_ERRNO_EXX(37, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2396:9: note: in expansion of macro 'CORE_LOGF_X' - 2396 | CORE_LOGF_X(3, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5521:9: note: in expansion of macro 'CORE_LOGF_X' - 5521 | CORE_LOGF_X(115, eLOG_Note, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2419:9: note: in expansion of macro 'CORE_LOGF_X' - 2419 | CORE_LOGF_X(4, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Accept': -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5558:9: note: in expansion of macro 'CORE_LOGF_X' - 5558 | CORE_LOGF_X(39, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2471:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2471 | CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2488:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2488 | CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5613:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5613 | CORE_LOGF_ERRNO_EXX(40, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2535:9: note: in expansion of macro 'CORE_LOGF_X' - 2535 | CORE_LOGF_X(7, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' - 155 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2569:9: note: in expansion of macro 'CORE_LOG' - 2569 | CORE_LOG(eLOG_Warning, "[URL_Connect] " - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5738:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5738 | CORE_LOGF_ERRNO_EXX(42, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2573:9: note: in expansion of macro 'CORE_LOG_X' - 2573 | CORE_LOG_X(9, eLOG_Error, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5748:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5748 | CORE_LOGF_ERRNO_EXX(152, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2615:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2615 | CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5759:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5759 | CORE_LOGF_ERRNO_EXX(137, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CloseListening': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5822:9: note: in expansion of macro 'CORE_LOGF_X' - 5822 | CORE_LOGF_X(44, eLOG_Note, - | ^~~~~~~~~~~ -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5848:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5848 | CORE_LOGF_ERRNO_EXX(45, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5942:17: note: in expansion of macro 'CORE_LOGF_X' - 5942 | CORE_LOGF_X(20, eLOG_Critical, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5995:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5995 | CORE_LOGF_ERRNO_EXX(94, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_SendMsg': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6042:9: note: in expansion of macro 'CORE_LOGF_X' - 6042 | CORE_LOGF_X(88, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6051:9: note: in expansion of macro 'CORE_LOGF_X' - 6051 | CORE_LOGF_X(89, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6108:17: note: in expansion of macro 'CORE_LOGF_X' - 6108 | CORE_LOGF_X(90, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6159:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 6159 | CORE_LOGF_ERRNO_EXX(91, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6213:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6213 | CORE_LOGF_ERRNO_X(28, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6241:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6241 | CORE_LOGF_ERRNO_X(143, eLOG_Warning, err, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6284:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6284 | CORE_LOGF_ERRNO_X(30, eLOG_Warning, err, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6303:13: note: in expansion of macro 'CORE_LOGF_X' - 6303 | CORE_LOGF_X(116, eLOG_Note, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -7308,6 +7036,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6359:9: note: in expansion of macro 'CORE_LOGF_X' 6359 | CORE_LOGF_X(117, eLOG_Note, | ^~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7397,8 +7126,7 @@ | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps - ^~~~~~~~~~~ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6817:9: note: in expansion of macro 'CORE_LOGF_X' 6817 | CORE_LOGF_X(55, eLOG_Error, | ^~~~~~~~~~~ @@ -7417,6 +7145,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6825:9: note: in expansion of macro 'CORE_LOGF_X' 6825 | CORE_LOGF_X(15, eLOG_Error, | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7433,6 +7162,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6971:9: note: in expansion of macro 'CORE_LOGF_X' 6971 | CORE_LOGF_X(56, eLOG_Error, | ^~~~~~~~~~~ +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7478,7 +7208,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7027:17: note: in expansion of macro 'CORE_LOGF_X' 7027 | CORE_LOGF_X(59, eLOG_Warning, | ^~~~~~~~~~~ -make[5]: warning: -j3 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7509,6 +7238,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7046:13: note: in expansion of macro 'CORE_LOGF_X' 7046 | CORE_LOGF_X(61, eLOG_Warning, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7525,6 +7256,7 @@ 7056 | CORE_LOGF_X(62, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7540,6 +7272,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7225:9: note: in expansion of macro 'CORE_LOGF_X' 7225 | CORE_LOGF_X(63, eLOG_Error, | ^~~~~~~~~~~ +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7572,6 +7305,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7308:13: note: in expansion of macro 'CORE_LOGF_X' 7308 | CORE_LOGF_X(65, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7587,6 +7323,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7318:9: note: in expansion of macro 'CORE_LOGF_X' 7318 | CORE_LOGF_X(66, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7650,6 +7387,14 @@ 7455 | CORE_LOGF_X(67, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write': +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:37: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7661,7 +7406,8 @@ | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ + | /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps + ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7512:17: note: in expansion of macro 'CORE_LOGF_X' 7512 | CORE_LOGF_X(68, eLOG_Error, | ^~~~~~~~~~~ @@ -7691,12 +7437,21 @@ | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ + | make[5]: warning: -j4 forced in submake: resetting jobserver mode. + ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7549:9: note: in expansion of macro 'CORE_LOGF_X' 7549 | CORE_LOGF_X(70, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +ebra.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o +/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blas/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -7711,6 +7466,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7568:9: note: in expansion of macro 'CORE_LOGF_X' 7568 | CORE_LOGF_X(71, eLOG_Warning, | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'x_SetupHttpProxy': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7726,8 +7485,52 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7575:9: note: in expansion of macro 'CORE_LOGF_X' 7575 | CORE_LOGF_X(72, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:554:9: note: in expansion of macro 'CORE_LOGF_X' + 554 | CORE_LOGF_X(10, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_CreateInternal': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:745:9: note: in expansion of macro 'CORE_LOGF_X' + 745 | CORE_LOGF_X(11, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:822:13: note: in expansion of macro 'CORE_LOGF_X' + 822 | CORE_LOGF_X(12, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7745,9 +7548,13 @@ 7722 | CORE_LOGF_X(73, eLOG_Error, | ^~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork': make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +t+-2.16.0+ds/c++/BUILD/lib/libcomposition_adjustment.so +/bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.composition_adjustment.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7763,6 +7570,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7784:9: note: in expansion of macro 'CORE_LOGF_X' 7784 | CORE_LOGF_X(158, eLOG_Warning, | ^~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7778,8 +7588,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7791:9: note: in expansion of macro 'CORE_LOGF_X' 7791 | CORE_LOGF_X(159, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +cd db/sqlite/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sqlitewrapp UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7795,8 +7606,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7804:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 7804 | CORE_LOGF_ERRNO_EXX(160, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay': +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7812,6 +7624,16 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7826:9: note: in expansion of macro 'CORE_LOGF_X' 7826 | CORE_LOGF_X(156, eLOG_Warning, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:137:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 137 | LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2140:9: note: in expansion of macro 'LOG_WRITE' + 2140 | LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11, + | ^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7843,6 +7665,22 @@ 7846 | CORE_LOGF_ERRNO_EXX(75, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2359:9: note: in expansion of macro 'CORE_LOG_X' + 2359 | CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)"); + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7871,9 +7709,56 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2396:9: note: in expansion of macro 'CORE_LOGF_X' + 2396 | CORE_LOGF_X(3, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2419:9: note: in expansion of macro 'CORE_LOGF_X' + 2419 | CORE_LOGF_X(4, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8017:9: note: in expansion of macro 'CORE_LOGF_X' 8017 | CORE_LOGF_X(79, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2471:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2471 | CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7889,6 +7774,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8024:9: note: in expansion of macro 'CORE_LOGF_X' 8024 | CORE_LOGF_X(78, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2488:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2488 | CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno, + | ^~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7910,6 +7813,53 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2535:9: note: in expansion of macro 'CORE_LOGF_X' + 2535 | CORE_LOGF_X(7, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' + 155 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2569:9: note: in expansion of macro 'CORE_LOG' + 2569 | CORE_LOG(eLOG_Warning, "[URL_Connect] " + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2573:9: note: in expansion of macro 'CORE_LOG_X' + 2573 | CORE_LOG_X(9, eLOG_Error, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ @@ -7926,6 +7876,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2615:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2615 | CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -7965,6 +7930,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8114:9: note: in expansion of macro 'CORE_LOGF_X' 8114 | CORE_LOGF_X(83, eLOG_Error, | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -w -j4 --jobserver-auth=7,8 all /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7995,7 +7962,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8156:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 8156 | CORE_LOGF_ERRNO_EXX(85, eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg': +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8073,7 +8042,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8288:9: note: in expansion of macro 'CORE_LOGF_X' 8288 | CORE_LOGF_X(87, eLOG_Error, | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8105,6 +8073,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8327:9: note: in expansion of macro 'CORE_LOGF_X' 8327 | CORE_LOGF_X(98, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8120,6 +8090,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8334:9: note: in expansion of macro 'CORE_LOGF_X' 8334 | CORE_LOGF_X(97, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8136,6 +8111,7 @@ 8354 | CORE_LOGF_X(99, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast': +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8182,7 +8158,6 @@ 8399 | CORE_LOGF_ERRNO_EXX(102, eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress': -make[5]: warning: -j3 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8198,7 +8173,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8570:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 8570 | CORE_LOGF_ERRNO_EXX(74, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetupSSLInternal': +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8217,114 +8194,150 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.h:37, @@ -8335,7 +8348,33 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil.cpp -o sequtil.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducibleIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.h:37, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:34: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -8344,6 +8383,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:44: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'x_ServiceName': @@ -8377,6 +8422,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:161:17: note: in expansion of macro 'CORE_LOGF_X' 161 | CORE_LOGF_X(8, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'x_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8393,7 +8442,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:447:13: note: in expansion of macro 'CORE_LOGF_X' 447 | CORE_LOGF_X(1, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'SERV_SetImplicitServerType': +THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c -o ncbi_connection.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c -o ncbi_service.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'SERV_SetImplicitServerType': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:1241:9: warning: pointer 'svc' may be used after 'realloc' [-Wuse-after-free] 1241 | free(svc); | ^~~~~~~~~ @@ -8402,19 +8457,9 @@ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | + 2/*"=\0"*/) + strlen(typ))) { | ~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil.cpp -o sequtil.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducibleTHREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c -o ncbi_connection.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c -o ncbi_service.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -WnoIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, @@ -8422,6 +8467,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:34: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c: In function 's_SendRcpt': @@ -9492,6 +9539,15 @@ 1224 | CORE_LOG_X(29, eLOG_Warning, "Heap Walk: NULL heap"); | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Next': +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c:32: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9523,21 +9579,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1325:9: note: in expansion of macro 'CORE_LOGF_X' 1325 | CORE_LOGF_X(33, eLOG_Error, | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c:32: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ --format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_base64.c -o ncbi_base64.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c -o ncbi_lb.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c:38: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] @@ -9555,7 +9597,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c:173:13: note: in expansion of macro 'CORE_LOGF_X' 173 | CORE_LOGF_X(33, eLOG_Error, | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, +-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_base64.c -o ncbi_base64.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c -o ncbi_lb.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:39: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, @@ -10110,25 +10157,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:1213:9: note: in expansion of macro 'CORE_LOGF_X' 1213 | CORE_LOGF_X(10, eLOG_Error, | ^~~~~~~~~~~ --path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o -/bin/rm -f libsequtil.so .libsequtil.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsequtil.so -/bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sequtil.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -cd db/sqlite/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sqlitewrapp UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:51: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -10263,12 +10291,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:630:9: note: in expansion of macro 'CORE_LOGF_X' 630 | CORE_LOGF_X(3, eLOG_Trace, | ^~~~~~~~~~~ - -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10364,6 +10387,30 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2417:9: note: in expansion of macro 'CORE_LOG' 2417 | CORE_LOG(eLOG_Critical, "fFTP_UseProxy not yet implemented"); | ^~~~~~~~ +-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o +/bin/rm -f libsequtil.so .libsequtil.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsequtil.so +/bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sequtil.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' + -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +cd objtools/logging/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=logging UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c:36: @@ -10546,24 +10593,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:443:9: note: in expansion of macro 'CORE_LOGF' 443 | CORE_LOGF(eLOG_Trace, | ^~~~~~~~~ -blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_version.c -o ncbi_version.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c -o ncbi_local.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c -o ncbi_lbsmd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c -o ncbi_linkerd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declarIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:36: + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, | ^~~~~~~~~~ @@ -10953,6 +10985,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:581:9: note: in expansion of macro 'CORE_LOGF_X' 581 | CORE_LOGF_X(eLSub_Message, eLOG_Trace, | ^~~~~~~~~~~ +blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_version.c -o ncbi_version.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c -o ncbi_local.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c -o ncbi_lbsmd.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c -o ncbi_linkerd.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declarIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:39: @@ -11959,6 +12006,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1469:9: note: in expansion of macro 'CORE_LOGF_X' 1469 | CORE_LOGF_X(eNSub_Alloc, eLOG_Critical, | ^~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd util/profile/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=utrtprof UNIX_PROJ="" sources= configurables=configurables.null /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c: In function 'SERV_NAMERD_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -11990,6 +12039,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1506:9: note: in expansion of macro 'CORE_LOGF_X' 1506 | CORE_LOGF_X(eNSub_BadData, eLOG_Warning, | ^~~~~~~~~~~ +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12035,6 +12086,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1551:9: note: in expansion of macro 'CORE_LOGF_X' 1551 | CORE_LOGF_X(eNSub_Message, eLOG_Trace, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -12183,32 +12242,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:342:5: note: in expansion of macro 'CORE_LOG' 342 | CORE_LOG(eLOG_Warning, "Using default local IPv4 specs"); | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_object_add': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 135 | strncpy(output_string, string, n); - | ^ -In function 'parson_strdup', - inlined from 'x_json_object_add' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:318:28: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here - 140 | return parson_strndup(string, strlen(string)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd objtools/logging/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=logging UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_init_string': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 135 | strncpy(output_string, string, n); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:1119:18: note: length computed here - 1119 | string_len = strlen(string); - | ^~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite/sqlitewrapp.cpp -o sqlitewrapp.o +/bin/rm -f libsqlitewrapp.so .libsqlitewrapp.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libsqlitewrapp.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sqlitewrapp.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lsqlite3 -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsqlitewrapp.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libsqlitewrapp.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsqlitewrapp.so +/bin/ln -f .sqlitewrapp.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sqlitewrapp.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.h:37, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:35: @@ -12218,8 +12271,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_object_add': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 135 | strncpy(output_string, string, n); + | ^ +In function 'parson_strdup', + inlined from 'x_json_object_add' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:318:28: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here + 140 | return parson_strndup(string, strlen(string)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:36: @@ -12902,15 +12962,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:857:21: note: in expansion of macro 'CORE_LOGF' 857 | CORE_LOGF(eLOG_Warning, | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_parse_string_with_comments': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 135 | strncpy(output_string, string, n); - | ^ -In function 'parson_strdup', - inlined from 'x_json_parse_string_with_comments' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:913:27: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here - 140 | return parson_strndup(string, strlen(string)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13206,15 +13257,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:1233:17: note: in expansion of macro 'CORE_LOGF' 1233 | CORE_LOGF(eLOG_Note, | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_deep_copy': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 135 | strncpy(output_string, string, n); - | ^ -In function 'parson_strdup', - inlined from 'x_json_value_deep_copy' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:1213:32: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here - 140 | return parson_strndup(string, strlen(string)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c: In function 'SERV_LBDNS_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -13321,12 +13363,32 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:1619:5: note: in expansion of macro 'CORE_LOGF' 1619 | CORE_LOGF(data->debug ? eLOG_Note : eLOG_Trace, | ^~~~~~~~~ -ation -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c -o ncbi_namerd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c -o parson.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c -o ncbi_localip.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c -o ncbi_lbdns.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbimake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_init_string': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 135 | strncpy(output_string, string, n); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:1119:18: note: length computed here + 1119 | string_len = strlen(string); + | ^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_parse_string_with_comments': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 135 | strncpy(output_string, string, n); + | ^ +In function 'parson_strdup', + inlined from 'x_json_parse_string_with_comments' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:913:27: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here + 140 | return parson_strndup(string, strlen(string)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_deep_copy': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 135 | strncpy(output_string, string, n); + | ^ +In function 'parson_strdup', + inlined from 'x_json_value_deep_copy' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:1213:32: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here + 140 | return parson_strndup(string, strlen(string)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging/message.cpp -o message.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging/listener.cpp -o listener.o /bin/rm -f libxlogging.so .libxlogging.so.stamp @@ -13336,38 +13398,23 @@ /bin/ln -f .xlogging.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xlogging.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -cd util/profile/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=utrtprof UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite/sqlitewrapp.cpp -o sqlitewrapp.o -/bin/rm -f libsqlitewrapp.so .libsqlitewrapp.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libsqlitewrapp.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sqlitewrapp.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lsqlite3 -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsqlitewrapp.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libsqlitewrapp.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsqlitewrapp.so -/bin/ln -f .sqlitewrapp.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sqlitewrapp.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -In file included from /usr/include/c++/14/map:62, +cd html/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +ation -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c -o ncbi_namerd.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c -o parson.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c -o ncbi_localip.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c -o ncbi_lbdns.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbiIn file included from /usr/include/c++/14/map:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, @@ -13431,104 +13478,92 @@ /bin/ln -f .utrtprof.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.utrtprof.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -cd html/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. --blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o -/bin/rm -f libgene_info.so .libgene_info.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgene_info.so -/bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gene_info.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -cd corelib/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null +cd corelib/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -cd util/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null +cd util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' /usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd serial/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/node.cpp -o node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/html.cpp -o html.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/htmlhelper.cpp -o htmlhelper.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/page.cpp -o page.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/pager.cpp -o pager.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/n -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/n/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o +/bin/rm -f libgene_info.so .libgene_info.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgene_info.so +/bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gene_info.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +cd util/compress/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdata.cpp -o hookdata.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdatakey.cpp -o hookdatakey.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typeinfo.cpp -o typeinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectinfo.cpp -o objectinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectiter.cpp -o objectiter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blasmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/compress.cpp -o compress.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream.cpp -o stream.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/streambuf.cpp -o streambuf.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream_util.cpp -o stream_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/bzip2.cpp -o bzip2.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/nc -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_pipe.cpp -o ncbi_pipe.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_pipe_connector.cpp -o ncbi_pipe_connector.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_reader_writer.cpp -o ncbi_conn_reader_writer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_userhost.cpp -o ncbi_userhost.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_monkey.cpp -o ncbi_monkey.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_cxx.cpp -o ncbi_service_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip_cxx.cpp -o ncbi_localip_cxx.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_blowfish.c -o ncbi_blowfish.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_usage_report.cpp -o ncbi_usage_report.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/buildmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -lm -lpthread -o gene_info_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -cd serial/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -cbi-blast+-2.16.0+ds/c++/src/html/selection.cpp -o selection.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-securitycbi-blast+-2.16.0+ds/c++/src/html/selection.cpp -o selection.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/components.cpp -o components.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/commentdiag.cpp -o commentdiag.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/indentstream.cpp -o indentstream.o @@ -13541,18 +13576,31 @@ /bin/ln -f .xhtml.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xhtml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -cd util/compress/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, +cd cgi/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -w -j4 --jobserver-auth=7,8 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/.#lock-map. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. + -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_monkey.cpp -o ncbi_monkey.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_cxx.cpp -o ncbi_service_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip_cxx.cpp -o ncbi_localip_cxx.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_blowfish.c -o ncbi_blowfish.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_usage_report.cpp -o ncbi_usage_report.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/buildbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/lzo.cpp -o lzo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/zlib.cpp -o zlib.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/zstd.cpp -o zstd.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/tar.cpp -o tar.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive.cpp -o archive.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, @@ -13879,48 +13927,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:212:5: note: in expansion of macro 'CORE_LOGF_X' 212 | CORE_LOGF_X(47, eLOG_Error, | ^~~~~~~~~~~ -/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/connect_misc.cpp -o connect_misc.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c -o ncbi_tls.o -/bin/rm -f libxconnect.so .libxconnect.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxconnect.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -Wl,--as-needed -fPIC ncbi_lbsm.o ncbi_lbsm_ipc.o ncbi_ansi_ext.o ncbi_types.o ncbi_core.o ncbi_priv.o ncbi_util.o ncbi_buffer.o ncbi_socket.o ncbi_connector.o ncbi_connection.o ncbi_connutil.o ncbi_ipv6.o ncbi_server_info.o ncbi_host_info.o ncbi_service.o ncbi_sendmail.o ncbi_base64.o ncbi_heapmgr.o ncbi_lb.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_service_connector.o ncbi_ftp_connector.o ncbi_version.o ncbi_iprange.o ncbi_local.o ncbi_lbsmd.o ncbi_dispd.o ncbi_linkerd.o ncbi_namerd.o parson.o ncbi_localip.o ncbi_lbdns.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_monkey.o ncbi_service_cxx.o ncbi_localip_cxx.o ncbi_blowfish.o ncbi_usage_report.o connect_misc.o ncbi_gnutlmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdata.cpp -o hookdata.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdatakey.cpp -o hookdatakey.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typeinfo.cpp -o typeinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectinfo.cpp -o objectinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectiter.cpp -o objectiter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blasmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/compress.cpp -o compress.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream.cpp -o stream.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/streambuf.cpp -o streambuf.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream_util.cpp -o stream_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/bzip2.cpp -o bzip2.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncs.o ncbi_mbedtls.o ncbi_tls.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxconnect.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnect.so -/bin/ln -f .xconnect.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnect.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -cd cgi/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -w -j3 --jobserver-auth=7,8 all -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/.#lock-map. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -bi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/lzo.cpp -o lzo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/zlib.cpp -o zlib.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/zstd.cpp -o zstd.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/tar.cpp -o tar.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive.cpp -o archive.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_In file included from /usr/include/c++/14/list:65, +In file included from /usr/include/c++/14/list:65, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_stack.hpp:36, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:42, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -13973,7 +13980,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgictx.cpp -o cgictx.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbires.cpp -o ncbires.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproIn file included from /usr/include/c++/14/list:65, +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/repro/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/connect_misc.cpp -o connect_misc.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c -o ncbi_tls.o +/bin/rm -f libxconnect.so .libxconnect.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxconnect.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -Wl,--as-needed -fPIC ncbi_lbsm.o ncbi_lbsm_ipc.o ncbi_ansi_ext.o ncbi_types.o ncbi_core.o ncbi_priv.o ncbi_util.o ncbi_buffer.o ncbi_socket.o ncbi_connector.o ncbi_connection.o ncbi_connutil.o ncbi_ipv6.o ncbi_server_info.o ncbi_host_info.o ncbi_service.o ncbi_sendmail.o ncbi_base64.o ncbi_heapmgr.o ncbi_lb.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_service_connector.o ncbi_ftp_connector.o ncbi_version.o ncbi_iprange.o ncbi_local.o ncbi_lbsmd.o ncbi_dispd.o ncbi_linkerd.o ncbi_namerd.o parson.o ncbi_localip.o ncbi_lbdns.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_monkey.o ncbi_service_cxx.o ncbi_localip_cxx.o ncbi_blowfish.o ncbi_usage_report.o connect_misc.o ncbi_gnutlIn file included from /usr/include/c++/14/list:65, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_stack.hpp:36, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:42, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -13991,6 +14003,34 @@ /usr/include/c++/14/bits/stl_list.h:2002:8: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 2002 | _M_insert(iterator __position, _Args&&... __args) | ^~~~~~~~~ +s.o ncbi_mbedtls.o ncbi_tls.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxconnect.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnect.so +/bin/ln -f .xconnect.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnect.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd util/xregexp/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. t+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/continfo.cpp -o continfo.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stltypes.cpp -o stltypes.o @@ -14003,7 +14043,13 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_session.cpp -o cgi_session.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /buiIn member function 'void std::__cxx11::list<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ncbi::CTarEntryInfo; _Alloc = std::allocator]', +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /buiblast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfob.cpp -o classinfob.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/member.cpp -o member.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfo.cpp -o classinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/variant.cpp -o variant.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choice.cpp -o choice.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choiceptr.cpp -o choiceptr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-In member function 'void std::__cxx11::list<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ncbi::CTarEntryInfo; _Alloc = std::allocator]', inlined from 'std::unique_ptr > ncbi::CTar::x_ReadAndProcess(EAction)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/tar.cpp:3179:28: /usr/include/c++/14/bits/stl_list.h:1306:24: note: parameter passing for argument of type 'std::_List_iterator' changed in GCC 7.1 1306 | { this->_M_insert(end(), __x); } @@ -14025,157 +14071,24 @@ /usr/include/c++/14/bits/stl_list.h:1306:24: note: parameter passing for argument of type 'std::_List_iterator' changed in GCC 7.1 1306 | { this->_M_insert(end(), __x); } | ~~~~~~~~~~~~~~~^~~~~~~~~~~~ -MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_.cpp -o archive_.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o -/bin/rm -f libxcompress.so .libxcompress.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o lzo.o zlib.o zstd.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcompress.so -/bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcompress.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -cd connect/ext/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnext UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -w -j3 --jobserver-auth=7,8 all -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnext to make__ext_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/.#lock-map. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb.c:39: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c: In function 'CRYPT_EncodeString': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:96:9: note: in expansion of macro 'CORE_LOG_X' - 96 | CORE_LOG_X(2, eLOG_Error, "[CRYPT_Encode] Bad key"); - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c: In function 'CRYPT_DecodeString': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:120:9: note: in expansion of macro 'CORE_LOG_X' - 120 | CORE_LOG_X(4, eLOG_Error, "[CRYPT_Decode] Bad key"); - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c: In function 'NcbiDecrypt': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' - 155 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:233:9: note: in expansion of macro 'CORE_LOG' - 233 | CORE_LOG(eLOG_Trace, "[CRYPT_Decode] Bad ciphertext"); - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:238:9: note: in expansion of macro 'CORE_LOGF' - 238 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' - 155 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:253:13: note: in expansion of macro 'CORE_LOG' - 253 | CORE_LOG(eLOG_Trace, "[CRYPT_Decode] Corrupt ciphertext"); - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp: In member function 'virtual void ncbi::CDBLB_ServiceMapper::GetServerOptions(const std::string&, ncbi::IDBServiceMapper::TOptions*)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:336:33: warning: taking address of packed member of 'SLBSM_HostLoad' may result in an unaligned pointer value [-Waddress-of-packed-member] - 336 | HINFO_Status(hinfo, &load.status); - | ^~~~~~~~~~~~ -ld/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/user_agent.cpp -o user_agent.o -/bin/rm -f libxcgi.so .libxcgi.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxcgi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcgi.so -/bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcgi.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -cd util/xregexp/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -cd algo/blast/core/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -lm -lpthread -o gene_info_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +cd algo/blast/core/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfob.cpp -o classinfob.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/member.cpp -o member.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfo.cpp -o classinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/variant.cpp -o variant.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choice.cpp -o choice.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choiceptr.cpp -o choiceptr.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:484:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 484 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); @@ -14184,22 +14097,6 @@ 491 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); | ^ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_OneHit': -In file included from /usr/include/c++/14/map:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbithr_conf.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimtx.hpp:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ext/ncbi_dblb_svcmapper.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:37: -/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, std::pair > >; _KeyOfValue = std::_Select1st, std::pair > > >; _Compare = std::less >; _Alloc = std::allocator, std::pair > > >]': -/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, std::pair > >, std::_Select1st, std::pair > > >, std::less >, std::allocator, std::pair > > > >::const_iterator' changed in GCC 7.1 - 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:751:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 751 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); | ^ @@ -14216,74 +14113,42 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c:1590:10: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 1590 | ((T_MB_IdxEndSearchIndication)( | ^ -In file included from /usr/include/c++/14/map:63: -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = std::pair >; _Compare = std::less >; _Alloc = std::allocator, std::pair > > >]', - inlined from 'virtual void ncbi::CDBLB_ServiceMapper::SetPreference(const std::string&, const ncbi::TSvrRef&, double)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:448:28: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, std::pair > >, std::_Select1st, std::pair > > >, std::less >, std::allocator, std::pair > > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c -o aa_ungapped.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_diagnostics.c -o blast_diagnostics.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c -o blast_engine.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_extend.c -o blast_extend.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_filter.c -o blast_filter.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = std::pair >; _Compare = std::less >; _Alloc = std::allocator, std::pair > > >]', - inlined from 'ncbi::TSvrRef ncbi::CDBLB_ServiceMapper::x_GetServer(const std::string&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:189:52: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, std::pair > >, std::_Select1st, std::pair > > >, std::less >, std::allocator, std::pair > > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = std::pair >; _Compare = std::less >; _Alloc = std::allocator, std::pair > > >]', - inlined from 'ncbi::TSvrRef ncbi::CDBLB_ServiceMapper::x_GetServer(const std::string&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:193:50: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, std::pair > >, std::_Select1st, std::pair > > >, std::less >, std::allocator, std::pair > > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_ifconf.c -o ncbi_ifconf.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c -o ncbi_crypt.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb.c -o ncbi_dblb.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_localnet.c -o ncbi_localnet.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp -o ncbi_dblb_svcmapper.o -/bin/rm -f libxconnext.so .libxconnext.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxconnext.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -Wl,--as-needed -fPIC ncbi_ifconf.o ncbi_crypt.o ncbi_dblb.o ncbi_localnet.o ncbi_dblb_svcmapper.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnext.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxconnext.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnext.so -/bin/ln -f .xconnext.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnext.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -cd connect/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xthrserv UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_.cpp -o archive_.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o +/bin/rm -f libxcompress.so .libxcompress.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o lzo.o zlib.o zstd.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcompress.so +/bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcompress.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +cd connect/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xthrserv UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c: In function 'Blast_RedoAlignmentCore_MT': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c:3003:27: warning: unused variable 'forbidden' [-Wunused-variable] - 3003 | Blast_ForbiddenRanges forbidden = {0,}; - | ^~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c: In function 'BlastChooseProteinScanSubject': +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c: In function 'Blast_RedoAlignmentCore_MT': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c:3003:27: warning: unused variable 'forbidden' [-Wunused-variable] + 3003 | Blast_ForbiddenRanges forbidden = {0,}; + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c: In function 'BlastChooseProteinScanSubject': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c:559:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 559 | lut->scansub_callback = (void *)s_BlastAaScanSubject; | ^ @@ -14293,18 +14158,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c:567:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 567 | lut->scansub_callback = (void *)s_BlastCompressedAaScanSubject; | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c: In function 'BlastNaHashLookupTableNew': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2236:27: warning: ISO C forbids assignment between function pointer and 'void *' [-Wpedantic] - 2236 | lookup->hash_callback = FNV_hash; - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2296:49: warning: ISO C forbids passing argument 8 of 'BlastHashLookupIndexQueryExactMatches' between function pointer and 'void *' [-Wpedantic] - 2296 | lookup->hash_callback, - | ~~~~~~^~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/core/blast_nalookup.h:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:31: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/core/blast_lookup.h:181:66: note: expected 'TNaLookupHashFunction' {aka 'unsigned int (*)(unsigned char *, unsigned int)'} but argument is of type 'void *' - 181 | TNaLookupHashFunction hash_func, - | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaChooseScanSubject': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c:291:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 291 | lookup->scansub_callback = (void *)s_BlastNaScanSubject_8_4; @@ -14431,12 +14284,19 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c:3006:12: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 3006 | return (void *)s_MBScanSubject_Any; | ^ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_lookup.c -o blast_lookup.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/n/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:47:54: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c: In function 'BlastNaHashLookupTableNew': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2236:27: warning: ISO C forbids assignment between function pointer and 'void *' [-Wpedantic] + 2236 | lookup->hash_callback = FNV_hash; + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2296:49: warning: ISO C forbids passing argument 8 of 'BlastHashLookupIndexQueryExactMatches' between function pointer and 'void *' [-Wpedantic] + 2296 | lookup->hash_callback, + | ~~~~~~^~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/core/blast_nalookup.h:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:31: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/core/blast_lookup.h:181:66: note: expected 'TNaLookupHashFunction' {aka 'unsigned int (*)(unsigned char *, unsigned int)'} but argument is of type 'void *' + 181 | TNaLookupHashFunction hash_func, + | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:47:54: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] 47 | CSocketRequest(CThreadedServer& server, SOCK sock) // NCBI_FAKE_WARNING | ^ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:33: @@ -14449,7 +14309,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/threaded_server.hpp:77:44: note: declared here 77 | NCBI_DEPRECATED_CLASS NCBI_XCONNECT_EXPORT CThreadedServer | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_options.c: In function 'LookupTableOptionsValidate': +D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_lookup.c -o blast_lookup.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/n/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_options.c: In function 'LookupTableOptionsValidate': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_options.c:1330:13: warning: unused variable 'bytes_written' [-Wunused-variable] 1330 | int bytes_written = snprintf(buffer, DIM(buffer), | ^~~~~~~~~~~~~ @@ -14546,13 +14411,40 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/na_ungapped.c:2190:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 2190 | (T_MB_IdbGetResults)lookup_wrap->read_indexed_db; | ^ +ld/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/user_agent.cpp -o user_agent.o +/bin/rm -f libxcgi.so .libxcgi.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxcgi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcgi.so +/bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcgi.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +cd connect/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xxconnect2 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. cbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_message.c -o blast_message.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_options.c -o blast_options.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_psi.c -o blast_psi.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/na_ungapped.c -o na_ungapped.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_psi_priv.c -o blast_psi_priv.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_seg.c -o blast_seg.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -s/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number': +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -sblast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/aliasinfo.cpp -o aliasinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistr.cpp -o objistr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostr.cpp -o objostr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objcopy.cpp -o objcopy.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/iterator.cpp -o iterator.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/serial.cpp -o serial.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c:306:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 306 | else if (strcasecmp("mapper", program) == 0) | ^~ @@ -14571,12 +14463,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c:1638:35: note: length computed here 1638 | size_t path_len = strlen(matrix_path); | ^~~~~~~~~~~~~~~~~~~ -BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/hspfilter_collector.c -o hspfilter_collector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/hspfilter_besthit.c -o hspfilter_besthit.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/hspfilter_culling.c -o hspfilter_culling.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp -o threaded_server.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/server.cpp -o server.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/server_monitor.cpp -o server_monitor.o @@ -14588,18 +14475,112 @@ /bin/ln -f .xthrserv.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xthrserv.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -cd connect/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xxconnect2 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -blast/core/link_hsps.c -o link_hsps.o +cd connect/ext/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnext UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -w -j4 --jobserver-auth=7,8 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnext to make__ext_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/.#lock-map. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb.c:39: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c: In function 'CRYPT_EncodeString': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:96:9: note: in expansion of macro 'CORE_LOG_X' + 96 | CORE_LOG_X(2, eLOG_Error, "[CRYPT_Encode] Bad key"); + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c: In function 'CRYPT_DecodeString': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:120:9: note: in expansion of macro 'CORE_LOG_X' + 120 | CORE_LOG_X(4, eLOG_Error, "[CRYPT_Decode] Bad key"); + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c: In function 'NcbiDecrypt': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' + 155 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:233:9: note: in expansion of macro 'CORE_LOG' + 233 | CORE_LOG(eLOG_Trace, "[CRYPT_Decode] Bad ciphertext"); + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:238:9: note: in expansion of macro 'CORE_LOGF' + 238 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' + 155 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:253:13: note: in expansion of macro 'CORE_LOG' + 253 | CORE_LOG(eLOG_Trace, "[CRYPT_Decode] Corrupt ciphertext"); + | ^~~~~~~~ +BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/hspfilter_collector.c -o hspfilter_collector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/hspfilter_besthit.c -o hspfilter_besthit.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/hspfilter_culling.c -o hspfilter_culling.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/link_hsps.c -o link_hsps.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/lookup_util.c -o lookup_util.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/lookup_wrap.c -o lookup_wrap.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/matrix_freq_ratios.c -o matrix_freq_ratios.o @@ -14634,7 +14615,55 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/gencode_singleton.c -o gencode_singleton.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/index_ungapped.c -o index_ungapped.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_traceback_mt_priv.c -o blast_traceback_mt_priv.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hspstream_mt_utils.c -o blast_hspstream_mt_utils.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp: In member function 'virtual void ncbi::CDBLB_ServiceMapper::GetServerOptions(const std::string&, ncbi::IDBServiceMapper::TOptions*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:336:33: warning: taking address of packed member of 'SLBSM_HostLoad' may result in an unaligned pointer value [-Waddress-of-packed-member] + 336 | HINFO_Status(hinfo, &load.status); + | ^~~~~~~~~~~~ +In file included from /usr/include/c++/14/map:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbithr_conf.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimtx.hpp:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ext/ncbi_dblb_svcmapper.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:37: +/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, std::pair > >; _KeyOfValue = std::_Select1st, std::pair > > >; _Compare = std::less >; _Alloc = std::allocator, std::pair > > >]': +/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, std::pair > >, std::_Select1st, std::pair > > >, std::less >, std::allocator, std::pair > > > >::const_iterator' changed in GCC 7.1 + 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/map:63: +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = std::pair >; _Compare = std::less >; _Alloc = std::allocator, std::pair > > >]', + inlined from 'virtual void ncbi::CDBLB_ServiceMapper::SetPreference(const std::string&, const ncbi::TSvrRef&, double)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:448:28: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, std::pair > >, std::_Select1st, std::pair > > >, std::less >, std::allocator, std::pair > > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = std::pair >; _Compare = std::less >; _Alloc = std::allocator, std::pair > > >]', + inlined from 'ncbi::TSvrRef ncbi::CDBLB_ServiceMapper::x_GetServer(const std::string&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:189:52: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, std::pair > >, std::_Select1st, std::pair > > >, std::less >, std::allocator, std::pair > > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = std::pair >; _Compare = std::less >; _Alloc = std::allocator, std::pair > > >]', + inlined from 'ncbi::TSvrRef ncbi::CDBLB_ServiceMapper::x_GetServer(const std::string&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:193:50: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, std::pair > >, std::_Select1st, std::pair > > >, std::less >, std::allocator, std::pair > > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hspstream_mt_utils.c -o blast_hspstream_mt_utils.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/boost_erf.c -o boost_erf.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/jumper.c -o jumper.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/hspfilter_mapper.c -o hspfilter_mapper.o @@ -14646,24 +14675,37 @@ /bin/ln -f .blast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -cd connect/services/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnserv UNIX_PROJ="" sources= configurables=configurables.null +cd connect/services/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnserv UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=xconnserv -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/aliasinfo.cpp -o aliasinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistr.cpp -o objistr.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostr.cpp -o objostr.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objcopy.cpp -o objcopy.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/iterator.cpp -o iterator.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/serial.cpp -o serial.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=xconnserv -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_ifconf.c -o ncbi_ifconf.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c -o ncbi_crypt.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb.c -o ncbi_dblb.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_localnet.c -o ncbi_localnet.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp -o ncbi_dblb_svcmapper.o +/bin/rm -f libxconnext.so .libxconnext.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxconnext.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -Wl,--as-needed -fPIC ncbi_ifconf.o ncbi_crypt.o ncbi_dblb.o ncbi_localnet.o ncbi_dblb_svcmapper.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnext.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxconnext.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnext.so +/bin/ln -f .xconnext.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnext.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/delaybuf.cpp -o delaybuf.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/pack_string.cpp -o pack_string.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/exception.cpp -o exception.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objhook.cpp -o objhook.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objlist.cpp -o objlist.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objstack.cpp -o objstack.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_uv_nghttp2.cpp -o ncbi_uv_nghttp2.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http2_session.cpp -o ncbi_http2_session.o /bin/rm -f libxxconnect2.a .libxxconnect2.a.stamp @@ -14678,31 +14720,25 @@ /bin/ln -f .xxconnect2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xxconnect2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' --2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/delaybuf.cpp -o delaybuf.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/pack_string.cpp -o pack_string.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/exception.cpp -o exception.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objhook.cpp -o objhook.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objlist.cpp -o objlist.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objstack.cpp -o objstack.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_worker.cpp -o grid_worker.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/ns_client_factory.cpp -o ns_client_factory.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_worker_app.cpp -o grid_worker_app.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_client.cpp -o grid_client.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_client_app.cpp -o grid_client_app.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_commit_thread.cpp -o wn_commit_thread.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_main_loop.cpp -o wn_main_loop.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_cleanup.cpp -o wn_cleanup.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_offline_mode.cpp -o wn_offline_mode.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_control_thread.cpp -o grid_control_thread.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_globals.cpp -o grid_globals.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasn.cpp -o objostrasn.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasn.cpp -o objostrasn.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrasn.cpp -o objistrasn.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasnb.cpp -o objostrasnb.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrasnb.cpp -o objistrasnb.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrxml.cpp -o objostrxml.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrxml.cpp -o objistrxml.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_rw_impl.cpp -o grid_rw_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -ISAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_commit_thread.cpp -o wn_commit_thread.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_main_loop.cpp -o wn_main_loop.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_cleanup.cpp -o wn_cleanup.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_offline_mode.cpp -o wn_offline_mode.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_control_thread.cpp -o grid_control_thread.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_globals.cpp -o grid_globals.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_rw_impl.cpp -o grid_rw_impl.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/remote_app.cpp -o remote_app.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/srv_connections.cpp -o srv_connections.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netservice_api.cpp -o netservice_api.o @@ -14721,29 +14757,29 @@ /bin/ln -f .xser.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xser.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -cd serial/datatool/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd serial/datatool/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_submitter.cpp -o netschedule_api_submitter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_executor.cpp -o netschedule_api_executor.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_reader.cpp -o netschedule_api_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_admin.cpp -o netschedule_api_admin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp -o netschedule_api_getjob.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_keymake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/datatool.cpp -o datatool.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/type.cpp -o type.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/namespace.cpp -o namespace.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/statictype.cpp -o statictype.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/enumtype.cpp -o enumtype.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_In file included from /usr/include/c++/14/list:65, +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_submitter.cpp -o netschedule_api_submitter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_executor.cpp -o netschedule_api_executor.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_reader.cpp -o netschedule_api_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_admin.cpp -o netschedule_api_admin.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp -o netschedule_api_getjob.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_keyIn file included from /usr/include/c++/14/list:65, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_stack.hpp:36, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:42, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -14885,33 +14921,36 @@ /bin/ln -f datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -cd objects/general/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -cd objects/biblio/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd objects/medline/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +cd objects/general/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +cd objects/biblio/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +cd objects/medline/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +cd objects/pub/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh general all +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh biblio all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh general all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pub all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh medline all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m general.asn -M "" -oA \ - -oc general -or objects/general -odi -od general.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd general.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ + -oc pub -or objects/pub -odi -od pub.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ @@ -14920,23 +14959,43 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m general.asn -M "" -oA \ + -oc general -or objects/general -odi -od general.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd general.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m biblio.asn -M "objects/general/general.asn" -oA \ @@ -14946,86 +15005,91 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -cd objects/pub/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -cd objects/seqcode/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -cd objects/seq/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +cd objects/seqcode/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +cd objects/seq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd objects/seqset/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqcode all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pub all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +cd objects/scoremat/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqset all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh scoremat all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/Makefile.sources builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -w -j3 --jobserver-auth=9,10 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ - -oc pub -or objects/pub -odi -od pub.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/Makefile.sources builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -w -j4 --jobserver-auth=9,10 all +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqcode.asn -M "" -oA \ @@ -15034,48 +15098,84 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'. -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA \ + -oc seqset -or objects/seqset -odi -od seqset.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA \ + -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' /usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -w -j4 --jobserver-auth=7,8 flag-stamps +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j4 --jobserver-auth=7,8 flag-stamps make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' status=0 ; \ -MAKE="/usr/bin/make -w -j3 --jobserver-auth=12,14"; \ +MAKE="/usr/bin/make -w -j4 --jobserver-auth=12,14"; \ export MAKE; \ for x in seqalign seqblock seqfeat seqloc seqres seqtable; do \ d=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../$x ; \ @@ -15086,7 +15186,7 @@ echo "#include \"../$x/${x}___.cpp\"" > ${x}___.cpp ; \ done ; \ exit $status -/usr/bin/make -w -j3 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src +/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqalign.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA \ @@ -15095,7 +15195,7 @@ datatool: 2.23.2 make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign' -/usr/bin/make -w -j3 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src +/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqblock' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqblock.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA \ @@ -15103,10 +15203,15 @@ -ocvs -pch 'ncbi_pch.hpp' -fd seqblock.dump \ datatool: 2.23.2 -make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.make[7]: warning: -j3 forced in submake: resetting jobserver mode. -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. 16.0+ds/c++/src/objects/seqblock' -/usr/bin/make -w -j3 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqfeat MODULE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src +/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqfeat MODULE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqfeat.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn" -oA \ @@ -15115,7 +15220,7 @@ datatool: 2.23.2 make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat' -/usr/bin/make -w -j3 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src +/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqloc.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn" -oA \ @@ -15124,142 +15229,27 @@ datatool: 2.23.2 make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc' -/usr/bin/make -w -j3 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blasmake[7]: warning: -j3 forced in submake: resetting jobserver mode. -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blasmake[7]: warning: -j4 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -cd objects/seqset/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -cd objects/scoremat/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqset all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh scoremat all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA \ - -oc seqset -or objects/seqset -odi -od seqset.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA \ - -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' -/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -t+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA \ - -oc seqres -or objects/seqres -odi -od seqres.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump \ - -datatool: 2.23.2 -make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres' -/usr/bin/make -w -j3 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA \ - -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump \ - -datatool: 2.23.2 -make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable' -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seq all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqblock/seqblock.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA \ - -oc seq -or objects/seq -odi -od seq.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -/usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq TMPL=seq -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -cd objects/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +cd objects/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -cd objects/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blast all +cd objects/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastdb all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +cd objects/genomecoll/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh genome_collection all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA \ @@ -15269,15 +15259,35 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA \ + -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gencoll_client all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA \ @@ -15287,85 +15297,110 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +Waiting for /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lockmake[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -w -j4 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' /usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -cd objects/genomecoll/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh genome_collection all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +t+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src +make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA \ - -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA \ + -oc seqres -or objects/seqres -odi -od seqres.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gencoll_client all -Waiting for /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lockmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -cd objects/seqedit/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres' +/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src +make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA \ + -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump \ + +datatool: 2.23.2 +make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable' +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seq all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqblock/seqblock.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA \ + -oc seq -or objects/seq -odi -od seq.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +/usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq TMPL=seq -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +cd objects/seqedit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd objects/seqsplit/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqedit all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +cd objects/seqsplit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqsplit all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqedit all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA \ @@ -15375,8 +15410,15 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA \ @@ -15385,48 +15427,37 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +.make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' + +Acquired /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lock for PID 16724 (make_asn) make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' /usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -. -Acquired /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lock for PID 27943 (make_asn) -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA \ @@ -15436,55 +15467,53 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' /usr/bin/make[4] (Makefile.genome_collection.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' /usr/bin/make[4] (Makefile.gencoll_client.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=gencoll_client -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=gencoll_client -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -cd objects/submit/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +cd objects/submit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh submit all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -cd objects/variation/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh variation all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA \ @@ -15494,15 +15523,38 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +cd objects/variation/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh variation all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +cd objects/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id1 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA \ @@ -15512,43 +15564,15 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' -/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -cd objects/id1/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id1 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA \ @@ -15558,55 +15582,50 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' +/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +cd objects/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id2 all /usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -w -j4 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1cli -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -cd objects/id2/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id2 all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -cd objects/taxon1/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon1 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA \ @@ -15615,16 +15634,60 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1cli -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2cli -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +cd objects/taxon1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon1 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA \ @@ -15634,78 +15697,56 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' /usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' /usr/bin/make[4] (Makefile.local_taxon.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2cli -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=local_taxon -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=local_taxon -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -cd objects/blastxml/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +cd objects/blastxml/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +cd objects/blastxml2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml2 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. File blastxml.module not found. Using defaults... -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blastxml.asn -M "" -oA \ @@ -15715,38 +15756,16 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -cd objects/blastxml2/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml2 all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -cd objects/pubmed/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pubmed all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. File blastxml2.module not found. Using defaults... -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blastxml2.asn -M "" -oA \ @@ -15756,17 +15775,43 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' /usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -w -j4 --jobserver-auth=7,8 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +cd objects/pubmed/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pubmed all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ @@ -15776,43 +15821,33 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' /usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -cd objtools/eutils/efetch/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +cd objtools/eutils/efetch/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --xsd efetch all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. File efetch.module not found. Using defaults... -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=efetch MODULE_PATH=objtools/eutils/efetch MODULE_ASN=efetch.xsd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=efetch MODULE_PATH=objtools/eutils/efetch MODULE_ASN=efetch.xsd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m efetch.xsd -M "" -oA \ @@ -15822,38 +15857,39 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' /usr/bin/make[4] (Makefile.efetch.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch TMPL=efetch -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -cd objtools/eutils/egquery/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch TMPL=efetch -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +cd objtools/eutils/egquery/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd egquery all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -cd objtools/eutils/ehistory/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +cd objtools/eutils/ehistory/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd ehistory all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. File egquery.module not found. Using defaults... -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=egquery MODULE_PATH=objtools/eutils/egquery MODULE_ASN=egquery.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=egquery MODULE_PATH=objtools/eutils/egquery MODULE_ASN=egquery.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m egquery.dtd -M "" -oA \ @@ -15863,17 +15899,10 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' File ehistory.module not found. Using defaults... -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=ehistory MODULE_PATH=objtools/eutils/ehistory MODULE_ASN=ehistory.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=ehistory MODULE_PATH=objtools/eutils/ehistory MODULE_ASN=ehistory.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m ehistory.dtd -M "" -oA \ @@ -15882,45 +15911,51 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' -/usr/bin/make[4] (Makefile.egquery.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +/usr/bin/make[4] (Makefile.egquery.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.ehistory.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -w -j3 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +cd objtools/eutils/einfo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd einfo all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -w -j4 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -cd objtools/eutils/einfo/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd einfo all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. File einfo.module not found. Using defaults... -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=einfo MODULE_PATH=objtools/eutils/einfo MODULE_ASN=einfo.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=einfo MODULE_PATH=objtools/eutils/einfo MODULE_ASN=einfo.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m einfo.dtd -M "" -oA \ @@ -15930,38 +15965,33 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' /usr/bin/make[4] (Makefile.einfo.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -cd objtools/eutils/elink/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +cd objtools/eutils/elink/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd elink all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -cd objects/entrez2/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh entrez2 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. File elink.module not found. Using defaults... -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=elink MODULE_PATH=objtools/eutils/elink MODULE_ASN=elink.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=elink MODULE_PATH=objtools/eutils/elink MODULE_ASN=elink.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m elink.dtd -M "" -oA \ @@ -15971,80 +16001,39 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' /usr/bin/make[4] (Makefile.elink.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m entrez2.asn -M "" -oA \ - -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -/usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -cd objtools/eutils/epost/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +cd objects/entrez2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh entrez2 all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +cd objtools/eutils/epost/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd epost all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. File epost.module not found. Using defaults... -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=epost MODULE_PATH=objtools/eutils/epost MODULE_ASN=epost.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=epost MODULE_PATH=objtools/eutils/epost MODULE_ASN=epost.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m epost.dtd -M "" -oA \ @@ -16054,38 +16043,65 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m entrez2.asn -M "" -oA \ + -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.epost.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -cd objtools/eutils/esearch/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +cd objtools/eutils/esearch/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd esearch all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -cd objtools/eutils/espell/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd espell all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' File esearch.module not found. Using defaults... -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esearch MODULE_PATH=objtools/eutils/esearch MODULE_ASN=esearch.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esearch MODULE_PATH=objtools/eutils/esearch MODULE_ASN=esearch.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m esearch.dtd -M "" -oA \ @@ -16095,17 +16111,47 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.esearch.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +cd objtools/eutils/espell/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd espell all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. File espell.module not found. Using defaults... -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=espell MODULE_PATH=objtools/eutils/espell MODULE_ASN=espell.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=espell MODULE_PATH=objtools/eutils/espell MODULE_ASN=espell.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m espell.dtd -M "" -oA \ @@ -16115,44 +16161,38 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.esearch.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' /usr/bin/make[4] (Makefile.espell.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -cd objtools/eutils/esummary/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +cd objtools/eutils/esummary/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd esummary all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +cd objtools/eutils/uilist/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd uilist all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. File esummary.module not found. Using defaults... -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esummary MODULE_PATH=objtools/eutils/esummary MODULE_ASN=esummary.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esummary MODULE_PATH=objtools/eutils/esummary MODULE_ASN=esummary.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m esummary.dtd -M "" -oA \ @@ -16162,38 +16202,17 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -/usr/bin/make[4] (Makefile.esummary.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -cd objtools/eutils/uilist/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd uilist all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -cd objects/gbseq/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gbseq all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. File uilist.module not found. Using defaults... -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=uilist MODULE_PATH=objtools/eutils/uilist MODULE_ASN=uilist.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=uilist MODULE_PATH=objtools/eutils/uilist MODULE_ASN=uilist.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m uilist.dtd -M "" -oA \ @@ -16203,23 +16222,43 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.esummary.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.uilist.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +cd objects/gbseq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gbseq all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m gbseq.asn -M "" -oA \ @@ -16229,36 +16268,32 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -w -j3 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -cd objects/medlars/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +cd objects/medlars/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh medlars all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ @@ -16268,47 +16303,38 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' /usr/bin/make[4] (Makefile.medlars.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars TMPL=medlars -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars TMPL=medlars -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -cd objects/mla/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +cd objects/mla/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -cd objects/taxon3/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh mla all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +cd objects/taxon3/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon3 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA \ - -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars/medlars.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed/pubmed.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars/medlars.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed/pubmed.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA \ @@ -16317,70 +16343,75 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA \ + -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' /usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j3 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +cd objects/valid/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh valid all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -cd objects/valid/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh valid all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mlacli -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j3 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m valid.asn -M "" -oA \ @@ -16390,61 +16421,77 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mlacli -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -w -j3 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -cd objects/general/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -w -j4 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +cd objects/general/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -cd objects/seqcode/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +cd objects/seqcode/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -w -j3 --jobserver-auth=7,8 all +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +cd objects/blastxml/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -cd objects/blastxml/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j4 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +cd objects/blastxml2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o @@ -16455,17 +16502,17 @@ /bin/ln -f .seqcode.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqcode.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -cd objects/blastxml2/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objtools/eutils/egquery/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=egquery UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml/blastxml__.cpp -o blastxml__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o @@ -16476,38 +16523,17 @@ /bin/ln -f .blastxml.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastxml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -cd objtools/eutils/egquery/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=egquery UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery__.cpp -o egquery__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery___.cpp -o egquery___.o -/bin/rm -f libegquery.so .libegquery.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libegquery.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC egquery__.o egquery___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libegquery.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libegquery.so -/bin/ln -f .egquery.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.egquery.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -cd objtools/eutils/ehistory/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ehistory UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/eutils/ehistory/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ehistory UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2/blastxml2__.cpp -o blastxml2__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o @@ -16518,17 +16544,38 @@ /bin/ln -f .blastxml2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastxml2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -cd objtools/eutils/einfo/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=einfo UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/eutils/einfo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=einfo UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery__.cpp -o egquery__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery___.cpp -o egquery___.o +/bin/rm -f libegquery.so .libegquery.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libegquery.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC egquery__.o egquery___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libegquery.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libegquery.so +/bin/ln -f .egquery.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.egquery.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +cd objtools/eutils/elink/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=elink UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory/ehistory__.cpp -o ehistory__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory/ehistory___.cpp -o ehistory___.o @@ -16539,39 +16586,17 @@ /bin/ln -f .ehistory.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ehistory.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -cd objtools/eutils/elink/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=elink UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general__.cpp -o general__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general___.cpp -o general___.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/uoconv.cpp -o uoconv.o -/bin/rm -f libgeneral.so .libgeneral.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libgeneral.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC general__.o general___.o uoconv.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libgeneral.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgeneral.so -/bin/ln -f .general.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.general.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -cd objects/entrez2/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null +cd objects/entrez2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo/einfo__.cpp -o einfo__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo/einfo___.cpp -o einfo___.o @@ -16582,17 +16607,39 @@ /bin/ln -f .einfo.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.einfo.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -cd objtools/eutils/epost/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=epost UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/eutils/epost/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=epost UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general__.cpp -o general__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general___.cpp -o general___.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/uoconv.cpp -o uoconv.o +/bin/rm -f libgeneral.so .libgeneral.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libgeneral.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC general__.o general___.o uoconv.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libgeneral.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgeneral.so +/bin/ln -f .general.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.general.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +cd objtools/eutils/esearch/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=esearch UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost/epost__.cpp -o epost__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost/epost___.cpp -o epost___.o @@ -16603,17 +16650,17 @@ /bin/ln -f .epost.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.epost.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -cd objtools/eutils/esearch/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=esearch UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objtools/eutils/espell/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=espell UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2__.cpp -o entrez2__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2___.cpp -o entrez2___.o @@ -16624,17 +16671,15 @@ /bin/ln -f .entrez2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.entrez2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -cd objtools/eutils/espell/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=espell UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objtools/eutils/esummary/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=esummary UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink/elink__.cpp -o elink__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink/elink___.cpp -o elink___.o @@ -16644,18 +16689,20 @@ /bin/ln -f libelink.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libelink.so /bin/ln -f .elink.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.elink.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -w -j4 --jobserver-auth=7,8 all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -cd objtools/eutils/esummary/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=esummary UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objtools/eutils/uilist/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=uilist UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch/esearch__.cpp -o esearch__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch/esearch___.cpp -o esearch___.o @@ -16666,17 +16713,17 @@ /bin/ln -f .esearch.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.esearch.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -cd objtools/eutils/uilist/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=uilist UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objects/gbseq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell/espell__.cpp -o espell__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell/espell___.cpp -o espell___.o @@ -16687,38 +16734,17 @@ /bin/ln -f .espell.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.espell.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -cd objects/gbseq/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary/esummary__.cpp -o esummary__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary/esummary___.cpp -o esummary___.o -/bin/rm -f libesummary.so .libesummary.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libesummary.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC esummary__.o esummary___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesummary.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libesummary.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libesummary.so -/bin/ln -f .esummary.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.esummary.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -cd objects/valid/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=valid UNIX_PROJ="" sources= configurables=configurables.null +cd objects/valid/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=valid UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist/uilist__.cpp -o uilist__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist/uilist___.cpp -o uilist___.o @@ -16729,17 +16755,59 @@ /bin/ln -f .uilist.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.uilist.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -cd objects/biblio/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null +cd objects/biblio/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary/esummary__.cpp -o esummary__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary/esummary___.cpp -o esummary___.o +/bin/rm -f libesummary.so .libesummary.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libesummary.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC esummary__.o esummary___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesummary.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libesummary.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libesummary.so +/bin/ln -f .esummary.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.esummary.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +cd objects/entrez2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o +/bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libentrez2cli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC entrez2_client.o entrez2_client_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lentrez2 -lxconnect -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2cli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libentrez2cli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libentrez2cli.so +/bin/ln -f .entrez2cli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.entrez2cli.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +cd objtools/eutils/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=eutils UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid/valid__.cpp -o valid__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid/valid___.cpp -o valid___.o @@ -16750,17 +16818,6 @@ /bin/ln -f .valid.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.valid.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -cd objects/entrez2/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o @@ -16771,17 +16828,10 @@ /bin/ln -f .gbseq.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gbseq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -cd objtools/eutils/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=eutils UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp: In member function 'virtual ncbi::CRef ncbi::CEFetch_Request::FetchIdList(int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp:133:12: warning: catching polymorphic type 'class ncbi::CSerialException' by value [-Wcatch-value=] + 133 | catch (CSerialException) { + | ^~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio__.cpp -o biblio__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio___.cpp -o biblio___.o @@ -16793,49 +16843,45 @@ /bin/ln -f .biblio.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.biblio.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -cd objects/medline/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null +cd objects/medline/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null +cd objects/medlars/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp: In member function 'virtual ncbi::CRef ncbi::CEFetch_Request::FetchIdList(int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp:133:12: warning: catching polymorphic type 'class ncbi::CSerialException' by value [-Wcatch-value=] - 133 | catch (CSerialException) { - | ^~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o -/bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libentrez2cli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC entrez2_client.o entrez2_client_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lentrez2 -lxconnect -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2cli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libentrez2cli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libentrez2cli.so -/bin/ln -f .entrez2cli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.entrez2cli.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -cd objects/medlars/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars TMPL=medlars -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars TMPL=medlars -w -j4 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/eutils.cpp -o eutils.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp -o efetch.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/einfo.cpp -o einfo.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/esearch.cpp -o esearch.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/egquery.cpp -o egquery.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars/medlars__.cpp -o medlars__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars/medlars___.cpp -o medlars___.o +/bin/rm -f libmedlars.so .libmedlars.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libmedlars.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC medlars__.o medlars___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lbiblio -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libmedlars.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libmedlars.so +/bin/ln -f .medlars.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.medlars.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline__.cpp -o medline__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline___.cpp -o medline___.o /bin/rm -f libmedline.so .libmedline.so.stamp @@ -16845,38 +16891,40 @@ /bin/ln -f .medline.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.medline.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -cd objects/pub/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null +cd objects/pub/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null +cd objects/pubmed/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars/medlars__.cpp -o medlars__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars/medlars___.cpp -o medlars___.o -/bin/rm -f libmedlars.so .libmedlars.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libmedlars.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC medlars__.o medlars___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lbiblio -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libmedlars.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libmedlars.so -/bin/ln -f .medlars.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.medlars.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -cd objects/pubmed/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -w -j4 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/epost.cpp -o epost.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/elink.cpp -o elink.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/esummary.cpp -o esummary.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/espell.cpp -o espell.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/ehistory.cpp -o ehistory.o +/bin/rm -f libeutils.so .libeutils.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libeutils.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC eutils.o efetch.o einfo.o esearch.o egquery.o epost.o elink.o esummary.o espell.o ehistory.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -leinfo -lesearch -legquery -lepost -lelink -lesummary -lespell -luilist -lehistory -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeutils.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libeutils.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libeutils.so +/bin/ln -f .eutils.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.eutils.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed/pubmed__.cpp -o pubmed__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed/pubmed___.cpp -o pubmed___.o @@ -16887,17 +16935,17 @@ /bin/ln -f .pubmed.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.pubmed.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -cd objtools/eutils/efetch/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=efetch UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/eutils/efetch/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=efetch UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch TMPL=efetch -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch TMPL=efetch -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub__.cpp -o pub__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub___.cpp -o pub___.o @@ -16908,40 +16956,28 @@ /bin/ln -f .pub.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.pub.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -cd objects/seq/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null +cd objects/seq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null +cd objects/mla/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq TMPL=seq -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/epost.cpp -o epost.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/elink.cpp -o elink.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/esummary.cpp -o esummary.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/espell.cpp -o espell.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/ehistory.cpp -o ehistory.o -/bin/rm -f libeutils.so .libeutils.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libeutils.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC eutils.o efetch.o einfo.o esearch.o egquery.o epost.o elink.o esummary.o espell.o ehistory.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -leinfo -lesearch -legquery -lepost -lelink -lesummary -lespell -luilist -lehistory -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeutils.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libeutils.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libeutils.so -/bin/ln -f .eutils.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.eutils.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -cd objects/mla/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -w -j4 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq TMPL=seq -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/seqalign__.cpp:3, from seqalign__.cpp:1: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Dense_seg.cpp: In member function 'ncbi::objects::CDense_seg_Base::TDim ncbi::objects::CDense_seg::CheckNumRows() const': @@ -16988,6 +17024,16 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Seq_align.cpp:1893:52: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CDense_seg_Base::TNumseg' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] 1893 | for (CDense_seg::TNumseg i = 0; i < ds.GetLens().size(); | ~~^~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42, + from seqfeat__.cpp:1: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'ncbi::CTempString ncbi::objects::s_AaName(int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:124:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare] + 124 | if (idx > 0 && idx < ArraySize(sc_TrnaList)) { + | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'void ncbi::objects::s_SetTrnaProduct(CTrna_ext&, const std::string&, std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:186:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare] + 186 | for (int i = 0; i < ArraySize(sc_TrnaList); ++i) { + | ~~^~~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla__.cpp -o mla__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla___.cpp -o mla___.o @@ -16998,22 +17044,22 @@ /bin/ln -f .mla.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.mla.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -cd objects/mla/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mlacli UNIX_PROJ="" sources= configurables=configurables.null +cd objects/mla/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mlacli UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mlacli -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch__.cpp:282: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In function 'std::string eutils::{anonymous}::utf8_to_string(const std::string&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:157:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] 157 | catch (CStringException) { | ^~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mlacli -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToUpper(StringT&) [with StringT = std::__cxx11::basic_string]': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:173:14: required from here 173 | s_ToUpper(fore_name); @@ -17034,22 +17080,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' 77 | static const auto& s_Facet = get_ctype_facet(locale()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42, - from seqfeat__.cpp:1: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'ncbi::CTempString ncbi::objects::s_AaName(int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:124:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare] - 124 | if (idx > 0 && idx < ArraySize(sc_TrnaList)) { - | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'void ncbi::objects::s_SetTrnaProduct(CTrna_ext&, const std::string&, std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:186:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare] - 186 | for (int i = 0; i < ArraySize(sc_TrnaList); ++i) { - | ~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:48: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/SubSource.cpp: In function 'ncbi::objects::CCountries::EStateCleanup ncbi::objects::s_DoUSAStateCleanup(std::string&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/SubSource.cpp:4598:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] 4598 | if ( j == match) continue; | ~~^~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq__.cpp -o seq__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqalign__.cpp -o seqalign__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqblock__.cpp -o seqblock__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqfeat__.cpp -o seqfeat__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqloc__.cpp -o seqloc__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbimake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla_client.cpp -o mla_client.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o /bin/rm -f libmlacli.so .libmlacli.so.stamp @@ -17059,13 +17101,7 @@ /bin/ln -f .mlacli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.mlacli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq__.cpp -o seq__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqalign__.cpp -o seqalign__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqblock__.cpp -o seqblock__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqfeat__.cpp -o seqfeat__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqloc__.cpp -o seqloc__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbiIn file included from /usr/include/c++/14/map:62, +In file included from /usr/include/c++/14/map:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, @@ -17175,7 +17211,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_tree.cpp:2965:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] 2965 | catch (CStringException) { | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstStd(ncbi::CRef&) const': +IFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_tree.cpp -o seq_id_tree.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_F/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstStd(ncbi::CRef&) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp:1506:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] 1506 | if ( row_n == p_row ) { | ~~~~~~^~~~~~~~ @@ -17191,12 +17232,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp:2801:30: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'std::__cxx11::list::size_type' {aka 'unsigned int'} [-Wsign-compare] 2801 | while (seg >= 0 && seg < m_Segs.size()) { | ~~~~^~~~~~~~~~~~~~~ -IFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_tree.cpp -o seq_id_tree.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o +ILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/so_map.cpp -o so_map.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_loc_from_string.cpp -o seq_loc_from_string.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o @@ -17207,28 +17243,39 @@ /bin/ln -f .seq.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -cd objects/seqset/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null -cd objects/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +cd objects/seqset/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null +cd objects/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null +cd objects/genomecoll/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -w -j3 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -w -j4 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -w -j4 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb/blastdb__.cpp -o blastdb__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb/blastdb___.cpp -o blastdb___.o @@ -17239,17 +17286,17 @@ /bin/ln -f .blastdb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -cd objects/genomecoll/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objects/variation/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset__.cpp -o seqset__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset___.cpp -o seqset___.o @@ -17261,17 +17308,21 @@ /bin/ln -f .seqset.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqset.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -cd objects/variation/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objects/taxon1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/cache.cpp: In member function 'void ncbi::objects::CDomainStorage::AddField(int, int, const std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/cache.cpp:787:24: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 787 | if( m_types.size() <= field_no ) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/genome_collection__.cpp -o genome_collection__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o @@ -17282,91 +17333,44 @@ /bin/ln -f .genome_collection.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.genome_collection.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -cd objects/id1/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation/variation__.cpp -o variation__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation/variation___.cpp -o variation___.o -/bin/rm -f libvariation.so .libvariation.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libvariation.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC variation__.o variation___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseq -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libvariation.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libvariation.so -/bin/ln -f .variation.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.variation.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -cd objects/taxon1/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1__.cpp -o id1__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1___.cpp -o id1___.o -/bin/rm -f libid1.so .libid1.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libid1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC id1__.o id1___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid1.so -/bin/ln -f .id1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id1.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -cd objects/taxon3/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null +cd objects/taxon3/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/cache.cpp: In member function 'void ncbi::objects::CDomainStorage::AddField(int, int, const std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/cache.cpp:787:24: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 787 | if( m_types.size() <= field_no ) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/taxon1.cpp -o taxon1.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/cache.cpp -o cache.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/utils.cpp -o utils.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reprodumake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3___.cpp -o taxon3___.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o -/bin/rm -f libtaxon3.so .libtaxon3.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libtaxon3.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC taxon3__.o taxon3___.o taxon3.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libtaxon3.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtaxon3.so -/bin/ln -f .taxon3.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon3.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -cd objects/scoremat/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reprodumake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation/variation__.cpp -o variation__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation/variation___.cpp -o variation___.o +/bin/rm -f libvariation.so .libvariation.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libvariation.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC variation__.o variation___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseq -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libvariation.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libvariation.so +/bin/ln -f .variation.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.variation.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +cd objects/scoremat/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. cible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o /bin/rm -f libtaxon1.so .libtaxon1.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libtaxon1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -lm -lpthread @@ -17375,17 +17379,17 @@ /bin/ln -f .taxon1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -cd objects/seqedit/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null +cd objects/seqedit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o @@ -17396,38 +17400,39 @@ /bin/ln -f .scoremat.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.scoremat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -cd objects/seqsplit/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null +cd objects/seqsplit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3___.cpp -o taxon3___.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o +/bin/rm -f libtaxon3.so .libtaxon3.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libtaxon3.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC taxon3__.o taxon3___.o taxon3.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libtaxon3.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtaxon3.so +/bin/ln -f .taxon3.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon3.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +cd objects/submit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o -/bin/rm -f libseqedit.so .libseqedit.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libseqedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqedit__.o seqedit___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libseqedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqedit.so -/bin/ln -f .seqedit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqedit.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -cd objects/submit/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit/submit__.cpp -o submit__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit/submit___.cpp -o submit___.o @@ -17438,17 +17443,59 @@ /bin/ln -f .submit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.submit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -cd objects/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null +cd objects/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o +/bin/rm -f libseqedit.so .libseqedit.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libseqedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqedit__.o seqedit___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libseqedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqedit.so +/bin/ln -f .seqedit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqedit.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +cd objects/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1__.cpp -o id1__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1___.cpp -o id1___.o +/bin/rm -f libid1.so .libid1.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libid1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC id1__.o id1___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid1.so +/bin/ln -f .id1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id1.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +cd objtools/readers/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjread -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o @@ -17459,24 +17506,30 @@ /bin/ln -f .seqsplit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqsplit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -cd objtools/readers/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjread -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/reader_message.cpp -o reader_message.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/reader_listener.cpp -o reader_listener.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/reader_message_handler.cpp -o reader_message_handler.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/read_util.cpp -o read_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/format_guess_ex.cpp -o format_guess_ex.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef ncbi::AgpRead(CNcbiIstream&, EAgpRead_IdRule, bool, std::vector >*)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILEmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_annot_info.cpp -o seq_annot_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/table_field.cpp -o table_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++//build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef ncbi::AgpRead(CNcbiIstream&, EAgpRead_IdRule, bool, std::vector >*)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp:58:12: warning: 'void ncbi::AgpRead(CNcbiIstream&, std::vector >&, EAgpRead_IdRule, bool, std::vector >*)' is deprecated [-Wdeprecated-declarations] 58 | AgpRead(is, entries, component_id_rule, set_gap_data, component_types); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -17491,7 +17544,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here 52 | void AgpRead(CNcbiIstream& is, | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpErrEx::GetCount(ncbi::CAgpErr::EErrCode) const': +_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/seqid_validate.cpp -o seqid_validate.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/acc_pattern.cpp -o acc_pattern.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp -o agp_read.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp -o agp_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-f/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpErrEx::GetCount(ncbi::CAgpErr::EErrCode) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp:1708:14: warning: comparison between 'enum ncbi::CAgpErr::EErrCode' and 'enum ncbi::CAgpErrEx::' [-Wenum-compare] 1708 | if (code < CODE_Last) { | ~~~~~^~~~~~~~~~~ @@ -17499,13 +17558,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp:585:28: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] 585 | catch(CException e){ | ^ -_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/seqid_validate.cpp -o seqid_validate.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/acc_pattern.cpp -o acc_pattern.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp -o agp_read.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp -o agp_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-fmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blast__.cpp -o blast__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blast___.cpp -o blast___.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/names.cpp -o names.o @@ -17516,43 +17569,32 @@ /bin/ln -f .xnetblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xnetblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -cd objects/id2/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null +cd objects/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. ormat-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/cigar.cpp -o cigar.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta.cpp -o fasta.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formats.cpp -o aln_formats.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/alnread.cpp -o alnread.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_errors.cpp -o aln_errors.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/remake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2/id2__.cpp -o id2__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2/id2___.cpp -o id2___.o -/bin/rm -f libid2.so .libid2.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libid2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC id2__.o id2___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqsplit -lseq -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libid2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid2.so -/bin/ln -f .id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id2.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reBUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_selector.cpp -o annot_selector.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_descr_ci.cpp -o seq_descr_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/feat_ci.cpp -o feat_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I//build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp: In function 'void ncbi::objects::AlnUtil::CheckId(const std::string&, const std::vector&, int, int, bool)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp:56:28: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 56 | if ((orderedIds.size() > idCount) && + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp: In member function 'bool ncbi::objects::CAlnFormatGuesser::xSampleIsClustal(TSample&, ncbi::objects::CPeekAheadStream&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp:137:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] 137 | if (lineCount < sample.size()) { @@ -17575,10 +17617,27 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp:295:22: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 295 | return (dataSize == (endOffset - startOffset + 1)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp: In function 'void ncbi::objects::AlnUtil::CheckId(const std::string&, const std::vector&, int, int, bool)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp:56:28: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 56 | if ((orderedIds.size() > idCount) && - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2/id2__.cpp -o id2__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2/id2___.cpp -o id2___.o +/bin/rm -f libid2.so .libid2.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libid2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC id2__.o id2___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqsplit -lseq -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libid2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid2.so +/bin/ln -f .id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id2.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'void ncbi::CAlnReader::x_VerifyAlignmentInfo(const ncbi::objects::SAlignmentFile&, TReadFlags)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:409:29: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 409 | for (int i=0; i< numDeflines; ++i) { @@ -17599,317 +17658,56 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp:233:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] 233 | if (index >= mSeqIds.size()) { | ~~~~~~^~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o -/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp -ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_unit_test_util.a -/bin/ln -f .blast_unit_test_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_unit_test_util.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -producible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_error_reporter.cpp -o aln_error_reporter.o +build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/graph_ci.cpp -o graph_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_object.cpp -o annot_object.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_object_index.cpp -o annot_object_index.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_ci.cpp -o annot_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_info.cpp -o tse_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_info_object.cpp -o tse_info_object.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_error_reporter.cpp -o aln_error_reporter.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp -o aln_formatguess.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp -o aln_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp -o aln_scanner.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_fastagap.cpp -o aln_scanner_fastagap.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Wmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o -/bin/rm -f libseqalign_util.a .libseqalign_util.a.stamp -ar cr libseqalign_util.a seqalign_cmp.o seqalign_set_convert.o -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqalign_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libseqalign_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqalign_util.a -/bin/ln -f .seqalign_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqalign_util.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp: In member function 'void ncbi::objects::CAlnScannerClustal::sProcessClustalDataLine(const std::vector >&, int, int, int, bool, int&)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -W/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp: In member function 'void ncbi::objects::CAlnScannerClustal::sProcessClustalDataLine(const std::vector >&, int, int, int, bool, int&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp:296:27: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 296 | if (currentLineLength != blockLineLength) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:129:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 129 | if (dataLineCount < mSequenceCount) { // in first block - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:210:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 210 | if (mSequenceCount != mSeqIds.size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -error=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp -o aln_scanner_clustal.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_nexus.cpp -o aln_scanner_nexus.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp -o aln_scanner_phylip.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp -o aln_scanner_sequin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp -o aln_scanner_multalign.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp: In member function 'virtual void ncbi::objects::CAlnScannerSequin::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:75:33: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 75 | if (lineInBlock != mSeqIds.size()) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:156:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 156 | if (lineInBlock >= mSeqIds.size()) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:186:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] - 186 | for (auto i = 0; i < seqData.size(); ++i) { - | ~~^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp: In static member function 'static bool ncbi::objects::CAlnScannerSequin::xExtractSequinSequenceData(const std::string&, std::string&, std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:259:42: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] - 259 | for (auto curBlock = 3; curBlock < tokens.size() - 1; ++curBlock) { - | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:264:42: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] - 264 | for (auto curBlock = 1; curBlock < tokens.size(); ++curBlock) { - | ~~~~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp: In member function 'virtual void ncbi::objects::CAlnScannerMultAlign::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:125:37: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 125 | if (lineInBlock != expectedNumSequences) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:135:48: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 135 | if (!inFirstBlock && lineInBlock == expectedNumSequences) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp: In function 'ncbi::CRef ncbi::ExtractPssmAncillaryData(const objects::CPssmWithParameters&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp:802:66: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 802 | true)); - | ^ -path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/getfeature.cpp -o getfeature.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/track_data.cpp -o track_data.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/reader_data.cpp -o reader_data.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/microarray_reader.cpp -o microarray_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o -/bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp -ar cr libblast_app_util.a blast_app_util.o -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_app_util.a -/bin/ln -f .blast_app_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_app_util.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd objects/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch__.cpp -o efetch__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch___.cpp -o efetch___.o -/bin/rm -f libefetch.so .libefetch.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libefetch.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC efetch__.o efetch___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libefetch.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libefetch.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libefetch.so -/bin/ln -f .efetch.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.efetch.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -cd objmgr/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blastclient.cpp -o blastclient.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o -/bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxnetblastcli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blastclient.o blastclient_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxnetblast -lxconnect -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxnetblastcli.so -/bin/ln -f .xnetblastcli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xnetblastcli.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=psg_client UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp: In member function 'bool ncbi::objects::CFeatureTableReader_Imp::x_AddQualifierToCdregion(ncbi::CRef, ncbi::objects::CSeqFeatData&, EQual, const std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp:1279:22: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 1279 | } catch( CStringException ) { - | ^~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_annot_info.cpp -o seq_annot_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/table_field.cpp -o table_field.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/In file included from /usr/include/c++/14/algorithm:61, +In file included from /usr/include/c++/14/bits/stl_algo.h:61, + from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/wiggle_reader.cpp:35: -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': -/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbicntr.hpp:40, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiobj.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/impl/tse_info_object.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/impl/seq_entry_info.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/impl/tse_info.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/impl/data_source.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_info.cpp:35: +/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::objects::CSeq_id_Handle; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, + | ^~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': +/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1770 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -In file included from /usr/include/c++/14/bits/stl_algo.h:61: -/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::objects::SValueInfo; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, - | ^~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1876 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, - inlined from 'void ncbi::objects::CWiggleReader::xPreprocessValues(ncbi::objects::SWiggleStat&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/wiggle_reader.cpp:302:13: -/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1905 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1906 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1907 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, - inlined from 'void ncbi::objects::CWiggleReader::xPreprocessValues(ncbi::objects::SWiggleStat&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/wiggle_reader.cpp:302:13: -/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1822 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/phrap.cpp -o phrap.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/reader_base.cpp -o reader_base.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp -o readfeat.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/rIn file included from /usr/include/c++/14/map:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/pubseq_gateway/client/psg_client.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp:32: -/usr/include/c++/14/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = ncbi::CPSG_BlobId; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess; _Alloc = std::allocator >]': -/usr/include/c++/14/bits/stl_tree.h:2206:5: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess, std::allocator > >::const_iterator' changed in GCC 7.1 - 2206 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const ncbi::CPSG_BlobId&, int}; _Key = ncbi::CPSG_BlobId; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess; _Alloc = std::allocator >]': -/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess, std::allocator > >::const_iterator' changed in GCC 7.1 - 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/map:63: -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {const ncbi::CPSG_BlobId&, int}; _Key = ncbi::CPSG_BlobId; _Tp = unsigned int; _Compare = ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess; _Alloc = std::allocator >]', - inlined from 'std::pair, std::_Select1st >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {const ncbi::CPSG_BlobId&, int}; _Key = ncbi::CPSG_BlobId; _Tp = unsigned int; _Compare = ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/stl_map.h:601:22, - inlined from 'void ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*) [with TDataId = ncbi::CPSG_BlobId]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp:546:46: -/usr/include/c++/14/bits/stl_map.h:640:45: note: parameter passing for argument of type 'std::map::Report(const char*, unsigned int, const char*)::SLess, std::allocator > >::const_iterator' {aka 'std::_Rb_tree, std::_Select1st >, ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess, std::allocator > >::const_iterator'} changed in GCC 7.1 - 640 | return _M_t._M_emplace_hint_unique(__pos, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ - 641 | std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client.cpp -o psg_client.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp -o psg_client_transport.o -/bin/rm -f libpsg_client.so .libpsg_client.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libpsg_client.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC psg_client.o psg_client_transport.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnserv -lxxconnect2 -luv -lnghttp2 -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libpsg_client.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libpsg_client.so -/bin/ln -f .psg_client.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.psg_client.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -cd objtools/blast/services/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_selector.cpp -o annot_selector.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_descr_ci.cpp -o seq_descr_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/feat_ci.cpp -o feat_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/eproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff3_location_merger.cpp -o gff3_location_merger.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gtf_location_merger.cpp -o gtf_location_merger.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff_base_columns.cpp -o gff_base_columns.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o -/bin/rm -f libblast_services.so .libblast_services.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libblast_services.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_services.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_services.so -/bin/ln -f .blast_services.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_services.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xGetStartsOnPlusStrand(ncbi::TSeqPos, const std::vector >&, bool, std::vector&) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:832:21: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare] - 832 | for (auto i=0; i >&, ncbi::objects::ENa_strand, ncbi::objects::ENa_strand, ncbi::TSeqPos, ncbi::TSeqPos, const ncbi::objects::CGff2Record&, ncbi::objects::CSeq_align_Base::C_Segs::TDenseg&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:921:21: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare] - 921 | for (auto i=0; i)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:1006:21: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare] - 1006 | for (auto i=0; i >' changed in GCC 7.1 +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:129:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 129 | if (dataLineCount < mSequenceCount) { // in first block + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:210:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 210 | if (mSequenceCount != mSeqIds.size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algo.h:61, from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, @@ -17975,7 +17773,12 @@ /usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1822 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; bool _TrivialValueTypes = false]', +error=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp -o aln_scanner_clustal.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_nexus.cpp -o aln_scanner_nexus.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp -o aln_scanner_phylip.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp -o aln_scanner_sequin.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp -o aln_scanner_multalign.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; bool _TrivialValueTypes = false]', inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; _Tp = ncbi::objects::CSeq_id_Handle]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, inlined from 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::objects::CSeq_id_Handle; _Alloc = std::allocator]' at /usr/include/c++/14/bits/vector.tcc:984:34, @@ -17993,55 +17796,51 @@ /usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 137 | { return std::__do_uninit_copy(__first, __last, __result); } | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/bits/stl_algo.h:61, - from /usr/include/c++/14/algorithm:61, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbicntr.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiobj.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/impl/tse_info_object.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/impl/seq_entry_info.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/impl/tse_info.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/impl/data_source.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_info.cpp:35: -/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::objects::CSeq_id_Handle; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, - | ^~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': -/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, - | ^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1770 | __insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp: In member function 'void ncbi::objects::CPslData::Initialize(const ncbi::objects::CReaderBase::TReaderLine&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp:144:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 144 | if (mBlockCount != mBlockSizes.size()) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp:150:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 150 | if (mBlockCount != mBlockStartsQ.size()) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp:156:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 156 | if (mBlockCount != mBlockStartsT.size()) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/vcf_reader.cpp -o vcf_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_reader.cpp -o psl_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp -o psl_data.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEB/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp: In member function 'virtual bool ncbi::objects::CBedReader::xDetermineLikelyColumnCount(ncbi::objects::CLinePreBuffer&, ncbi::objects::ILineErrorListener*)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp:484:35: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 484 | if (blockSizes.size() != blockCount) { - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp:505:36: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 505 | if (blockStarts.size() != blockCount) { - | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o +/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp +ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_unit_test_util.a +/bin/ln -f .blast_unit_test_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_unit_test_util.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp: In member function 'virtual void ncbi::objects::CAlnScannerMultAlign::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:125:37: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 125 | if (lineInBlock != expectedNumSequences) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:135:48: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 135 | if (!inFirstBlock && lineInBlock == expectedNumSequences) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp: In member function 'virtual void ncbi::objects::CAlnScannerSequin::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:75:33: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 75 | if (lineInBlock != mSeqIds.size()) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:156:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 156 | if (lineInBlock >= mSeqIds.size()) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:186:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] + 186 | for (auto i = 0; i < seqData.size(); ++i) { + | ~~^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp: In static member function 'static bool ncbi::objects::CAlnScannerSequin::xExtractSequinSequenceData(const std::string&, std::string&, std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:259:42: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] + 259 | for (auto curBlock = 3; curBlock < tokens.size() - 1; ++curBlock) { + | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:264:42: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] + 264 | for (auto curBlock = 1; curBlock < tokens.size(); ++curBlock) { + | ~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1876 | __introsort_loop(_RandomAccessIterator __first, @@ -18070,6 +17869,33 @@ /usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1822 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +URCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_source.cpp -o data_source.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/priority.cpp -o priority.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOUmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o +/bin/rm -f libseqalign_util.a .libseqalign_util.a.stamp +ar cr libseqalign_util.a seqalign_cmp.o seqalign_set_convert.o +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqalign_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libseqalign_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqalign_util.a +/bin/ln -f .seqalign_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqalign_util.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, @@ -18085,7 +17911,13 @@ 2089 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~ /usr/include/c++/14/bits/stl_algobase.h:2089:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val]', +path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/getfeature.cpp -o getfeature.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/track_data.cpp -o track_data.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/reader_data.cpp -o reader_data.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/microarray_reader.cpp -o microarray_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val]', inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator >; _Tp = ncbi::objects::CSeq_id_Handle]' at /usr/include/c++/14/bits/stl_algo.h:3849:28, inlined from 'bool ncbi::objects::CBioseq_Info::RemoveId(const ncbi::objects::CSeq_id_Handle&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_info.cpp:449:31: /usr/include/c++/14/bits/stl_algobase.h:2142:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 @@ -18101,18 +17933,7 @@ | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2143 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -URCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_source.cpp -o data_source.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/priority.cpp -o priority.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOUUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql.cpp -o bed_autosql.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql_standard.cpp -o bed_autosql_standard.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql_custom.cpp -o bed_autosql_custom.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_column_data.cpp -o bed_column_data.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_modIn file included from /usr/include/c++/14/algorithm:61, +In file included from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:38, @@ -18155,32 +17976,10 @@ 195 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/vector.tcc:195:5: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp: In function 'void ncbi::objects::s_GetPrimerInfo(const CSourceModParser::SMod*, const CSourceModParser::SMod*, std::vector, std::__cxx11::basic_string > >&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:877:20: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare] - 877 | for (int i=0; i&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:912:25: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] - 912 | for (auto i=0; i, ncbi::objects::CSeqFeatData&, EQual, const std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp:1279:22: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 1279 | } catch( CStringException ) { + | ^~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1876 | __introsort_loop(_RandomAccessIterator __first, @@ -18189,6 +17988,10 @@ /usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp: In function 'ncbi::CRef ncbi::ExtractPssmAncillaryData(const objects::CPssmWithParameters&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp:802:66: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 802 | true)); + | ^ In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, inlined from 'void ncbi::objects::CDataSource::GetTSESetWithBioseqAnnots(const ncbi::objects::CBioseq_Info&, const TTSE_Lock&, TTSE_LockMatchSet&, const ncbi::objects::SAnnotSelector*, ncbi::objects::CDataLoader::TProcessedNAs*, bool)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_source.cpp:1209:9: @@ -18260,13 +18063,102 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope.cpp -o scope.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/heap_scope.cpp -o heap_scope.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_S_parser.cpp -o source_mod_parser.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_converter.cpp -o agp_converter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/struct_cmt_reader.cpp -o struct_cmt_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_reader.cpp -o mod_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=6In file included from /usr/include/c++/14/bits/stl_algo.h:61, +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_Smake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o +/bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp +ar cr libblast_app_util.a blast_app_util.o +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_app_util.a +/bin/ln -f .blast_app_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_app_util.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +cd objects/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +In file included from /usr/include/c++/14/algorithm:61, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/wiggle_reader.cpp:35: +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': +/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, + | ^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1770 | __insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +In file included from /usr/include/c++/14/bits/stl_algo.h:61: +/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::objects::SValueInfo; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, + | ^~~~~~~~~~~~~ +_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/phrap.cpp -o phrap.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/reader_base.cpp -o reader_base.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp -o readfeat.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/r/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1876 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, + inlined from 'void ncbi::objects::CWiggleReader::xPreprocessValues(ncbi::objects::SWiggleStat&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/wiggle_reader.cpp:302:13: +/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1905 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1906 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1907 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, + inlined from 'void ncbi::objects::CWiggleReader::xPreprocessValues(ncbi::objects::SWiggleStat&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/wiggle_reader.cpp:302:13: +/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1822 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blastclient.cpp -o blastclient.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o +/bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxnetblastcli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blastclient.o blastclient_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxnetblast -lxconnect -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxnetblastcli.so +/bin/ln -f .xnetblastcli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xnetblastcli.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=psg_client UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +In file included from /usr/include/c++/14/bits/stl_algo.h:61, from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, @@ -18360,14 +18252,93 @@ 195 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/vector.tcc:195:5: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 -4 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_error.cpp -o mod_error.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/descr_mod_apply.cpp -o descr_mod_apply.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/feature_mod_apply.cpp -o feature_mod_apply.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_to_enum.cpp -o mod_to_enum.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/message_listener.cpp -o message_listener.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/line_error.cpp -o line_error.o -/bin/rm -f libxobjread.so .libxobjread.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxobjread.so -Wl,-rpathIn function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', +OURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_impl.cpp -o scope_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_info.cpp -o scope_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_handle.cpp -o tse_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map.cpp -o seq_map.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map_ci.cpp -o seq_map_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC In file included from /usr/include/c++/14/map:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/pubseq_gateway/client/psg_client.hpp:33, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp:32: +/usr/include/c++/14/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = ncbi::CPSG_BlobId; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess; _Alloc = std::allocator >]': +/usr/include/c++/14/bits/stl_tree.h:2206:5: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess, std::allocator > >::const_iterator' changed in GCC 7.1 + 2206 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const ncbi::CPSG_BlobId&, int}; _Key = ncbi::CPSG_BlobId; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess; _Alloc = std::allocator >]': +/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess, std::allocator > >::const_iterator' changed in GCC 7.1 + 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/map:63: +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {const ncbi::CPSG_BlobId&, int}; _Key = ncbi::CPSG_BlobId; _Tp = unsigned int; _Compare = ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess; _Alloc = std::allocator >]', + inlined from 'std::pair, std::_Select1st >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {const ncbi::CPSG_BlobId&, int}; _Key = ncbi::CPSG_BlobId; _Tp = unsigned int; _Compare = ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/stl_map.h:601:22, + inlined from 'void ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*) [with TDataId = ncbi::CPSG_BlobId]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp:546:46: +/usr/include/c++/14/bits/stl_map.h:640:45: note: parameter passing for argument of type 'std::map::Report(const char*, unsigned int, const char*)::SLess, std::allocator > >::const_iterator' {aka 'std::_Rb_tree, std::_Select1st >, ncbi::SPSG_StatsData::SData::Report(const char*, unsigned int, const char*)::SLess, std::allocator > >::const_iterator'} changed in GCC 7.1 + 640 | return _M_t._M_emplace_hint_unique(__pos, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ + 641 | std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +eproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff3_location_merger.cpp -o gff3_location_merger.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gtf_location_merger.cpp -o gtf_location_merger.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff_base_columns.cpp -o gff_base_columns.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xGetStartsOnPlusStrand(ncbi::TSeqPos, const std::vector >&, bool, std::vector&) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:832:21: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare] + 832 | for (auto i=0; i >&, ncbi::objects::ENa_strand, ncbi::objects::ENa_strand, ncbi::TSeqPos, ncbi::TSeqPos, const ncbi::objects::CGff2Record&, ncbi::objects::CSeq_align_Base::C_Segs::TDenseg&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:921:21: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare] + 921 | for (auto i=0; i)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:1006:21: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare] + 1006 | for (auto i=0; i*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, inlined from 'void ncbi::objects::CScope_Impl::x_GetTSESetWithBioseqAnnots(TTSE_LockMatchSet&, ncbi::objects::CBioseq_ScopeInfo&, const ncbi::objects::SAnnotSelector*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_impl.cpp:2580:9: /usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 @@ -18418,31 +18389,79 @@ /usr/include/c++/14/bits/stl_vector.h:1568:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1568 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_message.o reader_listener.o reader_message_handler.o read_util.o format_guess_ex.o seqid_validate.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o cigar.o fasta.o aln_formats.o alnread.o aln_errors.o aln_error_reporter.o aln_formatguess.o aln_util.o aln_reader.o aln_scanner.o aln_scanner_fastagap.o aln_scanner_clustal.o aln_scanner_nexus.o aln_scanner_phylip.o aln_scanner_sequin.o aln_scanner_multalign.o fasta_aln_builder.o fasta_reader_utils.o getfeature.o track_data.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_reader.o gtf_reader.o gff3_location_merger.o gtf_location_merger.o gff_base_columns.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o psl_reader.o psl_data.o bed_reader.o bed_autosql.o bed_autosql_standard.o bed_autosql_custom.o bed_column_data.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o struct_cmt_reader.o mod_reader.o mod_error.o descr_mod_apply.o feature_mod_apply.o mod_to_enum.o message_listener.o line_error.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lsubmit -lseqset -lseq -lseqcode -lsequtil -lgeneral -lxutil -lxlogging -lpub -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxobjread.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxobjread.so -/bin/ln -f .xobjread.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjread.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -OURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_impl.cpp -o scope_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_info.cpp -o scope_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_handle.cpp -o tse_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map.cpp -o seq_map.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map_ci.cpp -o seq_map_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_annot_ci.cpp -o seq_annot_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_table_ci.cpp -o seq_table_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/align_ci.cpp -o align_ci.o +I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/vcf_reader.cpp -o vcf_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_reader.cpp -o psl_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp -o psl_data.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEB/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp: In member function 'void ncbi::objects::CPslData::Initialize(const ncbi::objects::CReaderBase::TReaderLine&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp:144:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 144 | if (mBlockCount != mBlockSizes.size()) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp:150:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 150 | if (mBlockCount != mBlockStartsQ.size()) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp:156:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 156 | if (mBlockCount != mBlockStartsT.size()) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +ector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/align_ci.cpp -o align_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_loader.cpp -o data_loader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/handle_range.cpp -o handle_range.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/objmgr_exception.cpp -o objmgr_exception.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/handle_range_map.cpp -o handle_range_map.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/object_manager.cpp -o object_manager.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+dIn file included from /usr/include/c++/14/bits/stl_algo.h:61, +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+d/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp: In member function 'virtual bool ncbi::objects::CBedReader::xDetermineLikelyColumnCount(ncbi::objects::CLinePreBuffer&, ncbi::objects::ILineErrorListener*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp:484:35: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 484 | if (blockSizes.size() != blockCount) { + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp:505:36: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 505 | if (blockStarts.size() != blockCount) { + | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +UG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql.cpp -o bed_autosql.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql_standard.cpp -o bed_autosql_standard.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql_custom.cpp -o bed_autosql_custom.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_column_data.cpp -o bed_column_data.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp: In function 'void ncbi::objects::s_GetPrimerInfo(const CSourceModParser::SMod*, const CSourceModParser::SMod*, std::vector, std::__cxx11::basic_string > >&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:877:20: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare] + 877 | for (int i=0; i&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:912:25: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] + 912 | for (auto i=0; i >' changed in GCC 7.1 -s=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_vector.cpp -o seq_vector.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_vector_ci.cpp -o seq_vector_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_split_info.cpp -o tse_split_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_chunk_info.cpp -o tse_chunk_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-mapIn file included from /usr/include/c++/14/memory:69, +In file included from /usr/include/c++/14/memory:69, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_stack.hpp:37, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:42, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -18630,7 +18643,13 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::__cxx11::list >; _Compare = std::less; _Alloc = std::allocator > > >]', +=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_collector.cpp -o annot_collector.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o +/usr/biIn member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::__cxx11::list >; _Compare = std::less; _Alloc = std::allocator > > >]', inlined from 'ncbi::objects::CSeq_loc_Mapper::CSeq_loc_Mapper(ncbi::objects::CBioseq_Handle, ESeqMapDirection, ncbi::objects::CSeq_loc_Mapper_Options)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_loc_mapper.cpp:272:64: /usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree > >, std::_Select1st > > >, std::less, std::allocator > > > >::const_iterator' changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, @@ -18666,13 +18685,25 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_collector.cpp -o annot_collector.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o -/usr/biIn file included from /usr/include/c++/14/map:62, +4 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_error.cpp -o mod_error.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/descr_mod_apply.cpp -o descr_mod_apply.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/feature_mod_apply.cpp -o feature_mod_apply.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_to_enum.cpp -o mod_to_enum.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/message_listener.cpp -o message_listener.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/line_error.cpp -o line_error.o +/bin/rm -f libxobjread.so .libxobjread.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxobjread.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_message.o reader_listener.o reader_message_handler.o read_util.o format_guess_ex.o seqid_validate.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o cigar.o fasta.o aln_formats.o alnread.o aln_errors.o aln_error_reporter.o aln_formatguess.o aln_util.o aln_reader.o aln_scanner.o aln_scanner_fastagap.o aln_scanner_clustal.o aln_scanner_nexus.o aln_scanner_phylip.o aln_scanner_sequin.o aln_scanner_multalign.o fasta_aln_builder.o fasta_reader_utils.o getfeature.o track_data.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_reader.o gtf_reader.o gff3_location_merger.o gtf_location_merger.o gff_base_columns.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o psl_reader.o psl_data.o bed_reader.o bed_autosql.o bed_autosql_standard.o bed_autosql_custom.o bed_column_data.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o struct_cmt_reader.o mod_reader.o mod_error.o descr_mod_apply.o feature_mod_apply.o mod_to_enum.o message_listener.o line_error.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lsubmit -lseqset -lseq -lseqcode -lsequtil -lgeneral -lxutil -lxlogging -lpub -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxobjread.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxobjread.so +/bin/ln -f .xobjread.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjread.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +n/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_feat_handle.cpp -o seq_feat_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_graph_handle.cpp -o seq_graph_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-patIn file included from /usr/include/c++/14/map:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, @@ -18707,12 +18738,7 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -n/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_feat_handle.cpp -o seq_feat_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_graph_handle.cpp -o seq_graph_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-patIn file included from /usr/include/c++/14/map:62, +In file included from /usr/include/c++/14/map:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, @@ -18754,44 +18780,50 @@ /bin/ln -f .xobjmgr.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null -cd objmgr/util/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null +cd objmgr/util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd algo/dustmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -cd algo/dustmask/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -w -j3 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp: In function 'void ncbi::objects::GetProteinWeights(const CBioseq_Handle&, TWeights&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp:363:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] - 363 | } catch (CObjmgrUtilException) { - | ^~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp: In function 'ncbi::CRef ncbi::objects::sequence::SourceToProduct(const ncbi::objects::CSeq_feat&, const ncbi::objects::CSeq_loc&, TS2PFlags, ncbi::objects::CScope*, int*)': +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j4 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: In static member function 'static char* ncbi::CSeqDBAtlas::Alloc(size_t, bool)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:256:16: warning: catching polymorphic type 'class std::bad_alloc' by value [-Wcatch-value=] + 256 | catch(std::bad_alloc) { + | ^~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp: In function 'ncbi::CRef ncbi::objects::sequence::SourceToProduct(const ncbi::objects::CSeq_feat&, const ncbi::objects::CSeq_loc&, TS2PFlags, ncbi::objects::CScope*, int*)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:814:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 814 | } catch (CObjmgrUtilException) { | ^~~~~~~~~~~~~~~~~~~~ @@ -18806,18 +18838,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:4763:22: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 4763 | } catch (CObjmgrUtilException) { | ^~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask/symdust.cpp -o symdust.o -/bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxalgodustmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC symdust.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxalgodustmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgodustmask.so -/bin/ln -f .xalgodustmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgodustmask.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp: In instantiation of 'void ncbi::objects::x_Translate(const Container&, std::string&, int, const CGenetic_code*, bool, bool, bool, bool, bool*) [with Container = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string]': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:4103:16: required from here 4103 | x_Translate(seq, prot, 0, code, @@ -18836,14 +18856,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:3647:43: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] 3647 | const size_t usable_size = seq.size() > frame ? seq.size() - frame : 0; | ~~~~~~~~~~~^~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask/symdust.cpp -o symdust.o +/bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxalgodustmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC symdust.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxalgodustmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgodustmask.so +/bin/ln -f .xalgodustmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgodustmask.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /usr/include/c++/14/bits/stl_algo.h:61, from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, @@ -18868,17 +18900,23 @@ 1770 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: In static member function 'static char* ncbi::CSeqDBAtlas::Alloc(size_t, bool)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:256:16: warning: catching polymorphic type 'class std::bad_alloc' by value [-Wcatch-value=] - 256 | catch(std::bad_alloc) { - | ^~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUGIn file included from /usr/include/c++/14/algorithm:60: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp: In function 'void ncbi::objects::GetProteinWeights(const CBioseq_Handle&, TWeights&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp:363:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] + 363 | } catch (CObjmgrUtilException) { + | ^~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadBinaryGiList(const std::string&, std::vector&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:830:26: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] + 830 | if (((endp - beginp) < 2U) + | ~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadMemoryPigList(const char*, const char*, std::vector&, bool*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1021:32: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] + 1021 | if (((bendp - bbeginp) < 2U) + | ~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadMemoryTaxIdList(const char*, const char*, CSeqDBGiList::STaxIdsOids&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1094:52: warning: comparison of integer expressions of different signedness: 'Int4' {aka 'int'} and 'unsigned int' [-Wsign-compare] + 1094 | if (((bendp - bbeginp) < 2) || (bbeginp[0] != 0xFFFFFFFF) + | ~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /usr/include/c++/14/algorithm:60: /usr/include/c++/14/bits/stl_algobase.h: In function '_ForwardIterator std::__remove_if(_ForwardIterator, _ForwardIterator, _Predicate) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred]': /usr/include/c++/14/bits/stl_algobase.h:2161:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 2161 | __remove_if(_ForwardIterator __first, _ForwardIterator __last, @@ -18897,47 +18935,6 @@ | ^~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1235:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 /usr/include/c++/14/bits/stl_algo.h:1235:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -In file included from /usr/include/c++/14/bits/stl_algo.h:61, - from /usr/include/c++/14/algorithm:61, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/objistr.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:33: -/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::objects::feature::{anonymous}::SFeatRangeInfo; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, - | ^~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, - | ^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1770 | __insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::objects::feature::{anonymous}::SFeatRangeInfo; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, - | ^~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, - | ^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1770 | __insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp: In function 'std::string ncbi::objects::{anonymous}::sx_ErrorSeqIds(ncbi::objects::CReaderRequestResult&, const std::vector&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:1155:37: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare] - 1155 | if (++total > kMaxErrorSeqIds) continue; - | ~~~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:1162:23: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare] - 1162 | if (total > kMaxErrorSeqIds) { - | ~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1876 | __introsort_loop(_RandomAccessIterator __first, @@ -18946,14 +18943,6 @@ /usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1876 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function '_FIter std::remove_if(_FIter, _FIter, _Predicate) [with _FIter = __gnu_cxx::__normal_iterator >; _Predicate = ncbi::PathFinder]', inlined from 'void ncbi::s_RemoveAliasComponents(CBlastDbFinder&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb.cpp:1422:37, inlined from 'std::vector ncbi::FindBlastDBs(const std::string&, const std::string&, bool, bool, bool)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb.cpp:1458:32: @@ -18982,14 +18971,6 @@ /usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1822 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1876 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h: In function 'void std::__merge_adaptive(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Pointer, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/14/bits/stl_algo.h:2359:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 2359 | __merge_adaptive(_BidirectionalIterator __first, @@ -19001,553 +18982,7 @@ /usr/include/c++/14/bits/stl_tempbuf.h:263:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 263 | _Temporary_buffer<_ForwardIterator, _Tp>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadBinaryGiList(const std::string&, std::vector&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:830:26: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] - 830 | if (((endp - beginp) < 2U) - | ~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadMemoryPigList(const char*, const char*, std::vector&, bool*)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1021:32: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] - 1021 | if (((bendp - bbeginp) < 2U) - | ~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadMemoryTaxIdList(const char*, const char*, CSeqDBGiList::STaxIdsOids&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1094:52: warning: comparison of integer expressions of different signedness: 'Int4' {aka 'int'} and 'unsigned int' [-Wsign-compare] - 1094 | if (((bendp - bbeginp) < 2) || (bbeginp[0] != 0xFFFFFFFF) - | ~~~~~~~~~~~^~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, - | ^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 1770 | __insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -In file included from /usr/include/c++/14/algorithm:60: -/usr/include/c++/14/bits/stl_algobase.h: In function '_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Tp = pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val]': -/usr/include/c++/14/bits/stl_algobase.h:1488:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 1488 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, - | ^~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algobase.h:1488:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function '_ForwardIterator std::__upper_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Tp = pair >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 1980 | __upper_bound(_ForwardIterator __first, _ForwardIterator __last, - | ^~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__merge_without_buffer(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:2435:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2435 | __merge_without_buffer(_BidirectionalIterator __first, - | ^~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2435:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:2435:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:2460:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2460 | = std::__lower_bound(__middle, __last, *__first_cut, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2461 | __gnu_cxx::__ops::__iter_comp_val(__comp)); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2469:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2469 | = std::__upper_bound(__first, __middle, *__second_cut, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2470 | __gnu_cxx::__ops::__val_comp_iter(__comp)); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function '_FIter std::_V2::rotate(_FIter, _FIter, _FIter) [with _FIter = __gnu_cxx::__normal_iterator >*, std::vector > > >]', - inlined from 'void std::__merge_without_buffer(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:2475:15: -/usr/include/c++/14/bits/stl_algo.h:1357:27: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 1357 | return std::__rotate(__first, __middle, __last, - | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1358 | std::__iterator_category(__first)); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__merge_without_buffer(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:2476:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2476 | std::__merge_without_buffer(__first, __first_cut, __new_middle, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2477 | __len11, __len22, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2478:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2478 | std::__merge_without_buffer(__new_middle, __second_cut, __last, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2479 | __len1 - __len11, __len2 - __len22, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__inplace_stable_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:2743:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2743 | __inplace_stable_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2743:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:2748:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2748 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2752:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2752 | std::__inplace_stable_sort(__first, __middle, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2753:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2753 | std::__inplace_stable_sort(__middle, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2754:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2754 | std::__merge_without_buffer(__first, __middle, __last, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2755 | __middle - __first, - | ~~~~~~~~~~~~~~~~~~~ - 2756 | __last - __middle, - | ~~~~~~~~~~~~~~~~~~ - 2757 | __comp); - | ~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__merge_adaptive_resize(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Pointer, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:2382:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2382 | __merge_adaptive_resize(_BidirectionalIterator __first, - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2382:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:2382:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:2390:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2390 | std::__merge_adaptive(__first, __middle, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2391 | __len1, __len2, __buffer, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2403:37: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2403 | = std::__lower_bound(__middle, __last, *__first_cut, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2404 | __gnu_cxx::__ops::__iter_comp_val(__comp)); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2412:37: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2412 | = std::__upper_bound(__first, __middle, *__second_cut, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2413 | __gnu_cxx::__ops::__val_comp_iter(__comp)); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function '_FIter std::_V2::rotate(_FIter, _FIter, _FIter) [with _FIter = __gnu_cxx::__normal_iterator >*, std::vector > > >]', - inlined from '_BidirectionalIterator1 std::__rotate_adaptive(_BidirectionalIterator1, _BidirectionalIterator1, _BidirectionalIterator1, _Distance, _Distance, _BidirectionalIterator2, _Distance) [with _BidirectionalIterator1 = __gnu_cxx::__normal_iterator >*, vector > > >; _BidirectionalIterator2 = pair >*; _Distance = int]' at /usr/include/c++/14/bits/stl_algo.h:2352:20, - inlined from 'void std::__merge_adaptive_resize(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Pointer, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:2418:30: -/usr/include/c++/14/bits/stl_algo.h:1357:27: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 1357 | return std::__rotate(__first, __middle, __last, - | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1358 | std::__iterator_category(__first)); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__merge_adaptive_resize(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Pointer, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:2421:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2421 | std::__merge_adaptive_resize(__first, __first_cut, __new_middle, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2422 | __len11, __len22, - | ~~~~~~~~~~~~~~~~~ - 2423 | __buffer, __buffer_size, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2424:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2424 | std::__merge_adaptive_resize(__new_middle, __second_cut, __last, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2425 | _Distance(__len1 - __len11), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2426 | _Distance(__len2 - __len22), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2427 | __buffer, __buffer_size, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function '_OutputIterator std::__move_merge(_InputIterator, _InputIterator, _InputIterator, _InputIterator, _OutputIterator, _Compare) [with _InputIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _OutputIterator = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:2607:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2607 | __move_merge(_InputIterator __first1, _InputIterator __last1, - | ^~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2607:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:2607:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:2607:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function '_OutputIterator std::__move_merge(_InputIterator, _InputIterator, _InputIterator, _InputIterator, _OutputIterator, _Compare) [with _InputIterator = pair >*; _OutputIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:2607:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::objects::feature::{anonymous}::PLessByEnd]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, - inlined from 'ncbi::objects::feature::{anonymous}::TRangeArray& ncbi::objects::feature::{anonymous}::CFeatTreeParentTypeIndex::GetIndex(ncbi::objects::feature::{anonymous}::TCanonicalIdsMap&, const ncbi::objects::feature::{anonymous}::TInfoArray&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:1876:17, - inlined from 'ncbi::objects::feature::{anonymous}::TRangeArray& ncbi::objects::feature::CFeatTreeIndex::GetIndex(ncbi::objects::CSeqFeatData::ESubtype, bool, const ncbi::objects::feature::{anonymous}::TInfoArray&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:1904:31: -/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1905 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1906 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1907 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::objects::feature::{anonymous}::PLessByEnd]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, - inlined from 'ncbi::objects::feature::{anonymous}::TRangeArray& ncbi::objects::feature::{anonymous}::CFeatTreeParentTypeIndex::GetIndex(ncbi::objects::feature::{anonymous}::TCanonicalIdsMap&, const ncbi::objects::feature::{anonymous}::TInfoArray&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:1876:17, - inlined from 'ncbi::objects::feature::{anonymous}::TRangeArray& ncbi::objects::feature::CFeatTreeIndex::GetIndex(ncbi::objects::CSeqFeatData::ESubtype, bool, const ncbi::objects::feature::{anonymous}::TInfoArray&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:1904:31: -/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1822 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__merge_sort_with_buffer(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:2674:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2674 | __merge_sort_with_buffer(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2674:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -In function 'void std::__chunk_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Distance, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::__merge_sort_with_buffer(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:2685:34: -/usr/include/c++/14/bits/stl_algo.h:2664:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2664 | std::__insertion_sort(__first, __first + __chunk_size, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2667:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2667 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2667:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -In function 'void std::__merge_sort_loop(_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _Distance, _Compare) [with _RandomAccessIterator1 = __gnu_cxx::__normal_iterator >*, vector > > >; _RandomAccessIterator2 = pair >*; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::__merge_sort_with_buffer(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:2689:26: -/usr/include/c++/14/bits/stl_algo.h:2642:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2642 | __result = std::__move_merge(__first, __first + __step_size, - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2643 | __first + __step_size, - | ~~~~~~~~~~~~~~~~~~~~~~ - 2644 | __first + __two_step, - | ~~~~~~~~~~~~~~~~~~~~~ - 2645 | __result, __comp); - | ~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2642:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:2650:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2650 | std::__move_merge(__first, __first + __step_size, - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2651 | __first + __step_size, __last, __result, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2650:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -In function 'void std::__merge_sort_loop(_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _Distance, _Compare) [with _RandomAccessIterator1 = pair >*; _RandomAccessIterator2 = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::__merge_sort_with_buffer(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:2692:26: -/usr/include/c++/14/bits/stl_algo.h:2642:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2642 | __result = std::__move_merge(__first, __first + __step_size, - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2643 | __first + __step_size, - | ~~~~~~~~~~~~~~~~~~~~~~ - 2644 | __first + __two_step, - | ~~~~~~~~~~~~~~~~~~~~~ - 2645 | __result, __comp); - | ~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2650:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2650 | std::__move_merge(__first, __first + __step_size, - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2651 | __first + __step_size, __last, __result, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2650:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__stable_sort_adaptive(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:2700:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2700 | __stable_sort_adaptive(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2700:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:2700:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:2705:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2705 | std::__merge_sort_with_buffer(__first, __middle, __buffer, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2706:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2706 | std::__merge_sort_with_buffer(__middle, __last, __buffer, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2708:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2708 | std::__merge_adaptive(__first, __middle, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2709 | __middle - __first, __last - __middle, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2710 | __buffer, __comp); - | ~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__stable_sort_adaptive_resize(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Distance, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Pointer = pair >*; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:2716:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2716 | __stable_sort_adaptive_resize(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2716:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:2725:45: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2725 | std::__stable_sort_adaptive_resize(__first, __middle, __buffer, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2726 | __buffer_size, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2727:45: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2727 | std::__stable_sort_adaptive_resize(__middle, __last, __buffer, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2728 | __buffer_size, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2729:39: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2729 | std::__merge_adaptive_resize(__first, __middle, __last, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2730 | _Distance(__middle - __first), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2731 | _Distance(__last - __middle), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2732 | __buffer, __buffer_size, - | ~~~~~~~~~~~~~~~~~~~~~~~~ - 2733 | __comp); - | ~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:2736:36: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 2736 | std::__stable_sort_adaptive(__first, __middle, __last, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2737 | __buffer, __comp); - | ~~~~~~~~~~~~~~~~~ -In function 'void std::__stable_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::stable_sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >*, vector > > >; _Compare = ncbi::objects::sequence::COverlapPairLess]' at /usr/include/c++/14/bits/stl_algo.h:5029:36, - inlined from 'void ncbi::objects::sequence::GetOverlappingFeatures(const ncbi::objects::CSeq_loc&, ncbi::objects::CSeqFeatData_Base::E_Choice, ncbi::objects::CSeqFeatData::ESubtype, EOverlapType, TFeatScores&, ncbi::objects::CScope&, TBestFeatOpts, CGetOverlappingFeaturesPlugin*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:1203:21: -/usr/include/c++/14/bits/stl_algo.h:4948:15: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 4948 | _TmpBuf __buf(__first, (__last - __first + 1) / 2); - | ^~~~~ -/usr/include/c++/14/bits/stl_algo.h:4951:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 4951 | std::__stable_sort_adaptive(__first, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ - 4952 | __first + _DistanceType(__buf.size()), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 4953 | __last, __buf.begin(), __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:4955:35: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 4955 | std::__inplace_stable_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:4957:43: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 - 4957 | std::__stable_sort_adaptive_resize(__first, __last, __buf.begin(), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 4958 | _DistanceType(__buf.size()), __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::objects::feature::{anonymous}::PLessByStart]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, - inlined from 'void ncbi::objects::feature::s_CollectBestOverlaps(CFeatTree::TFeatArray&, {anonymous}::TBestArray&, const STypeLink&, {anonymous}::TRangeArray&, CFeatTree*, {anonymous}::TCanonicalIdsMap&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:2531:9: -/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1905 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1906 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1907 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::objects::feature::{anonymous}::PLessByStart]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, - inlined from 'void ncbi::objects::feature::s_CollectBestOverlaps(CFeatTree::TFeatArray&, {anonymous}::TBestArray&, const STypeLink&, {anonymous}::TRangeArray&, CFeatTree*, {anonymous}::TCanonicalIdsMap&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:2531:9: -/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1822 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/bits/stl_algo.h:61, - from /usr/include/c++/14/algorithm:61, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbithr_conf.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimtx.hpp:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbireg.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/metareg.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33: -/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::CSeqDBGiList::STiOid; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, - | ^~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::CSeqDBGiList::SGiOid; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, - | ^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1770 | __insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1876 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1876 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/14/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1812 | __final_insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1822 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/algorithm:60: -In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*; _Up = ncbi::objects::feature::CFeatTree::CFeatInfo*; bool _IsMove = false]', - inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = ncbi::objects::feature::CFeatTree::CFeatInfo**; _OI = ncbi::objects::feature::CFeatTree::CFeatInfo**]' at /usr/include/c++/14/bits/stl_algobase.h:521:30, - inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = ncbi::objects::feature::CFeatTree::CFeatInfo**; _OI = ncbi::objects::feature::CFeatTree::CFeatInfo**]' at /usr/include/c++/14/bits/stl_algobase.h:548:42, - inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator >; _OI = ncbi::objects::feature::CFeatTree::CFeatInfo**]' at /usr/include/c++/14/bits/stl_algobase.h:555:31, - inlined from '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator >; _OI = ncbi::objects::feature::CFeatTree::CFeatInfo**]' at /usr/include/c++/14/bits/stl_algobase.h:651:7, - inlined from 'static _ForwardIterator std::__uninitialized_copy::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::feature::CFeatTree::CFeatInfo**]' at /usr/include/c++/14/bits/stl_uninitialized.h:147:27, - inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::feature::CFeatTree::CFeatInfo**]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, - inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::feature::CFeatTree::CFeatInfo**; _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, - inlined from 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*; _Alloc = std::allocator]' at /usr/include/c++/14/bits/vector.tcc:1022:38, - inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:1488:19, - inlined from 'void ncbi::objects::feature::CFeatTree::x_AssignGenes()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:2911:25: -/usr/include/c++/14/bits/stl_algobase.h:452:30: warning: 'void* __builtin_memmove(void*, const void*, unsigned int)' writing between 5 and 2147483644 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] - 452 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/arm-linux-gnueabihf/c++/14/bits/c++allocator.h:33, - from /usr/include/c++/14/bits/allocator.h:46, - from /usr/include/c++/14/string:43, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:216: -In member function '_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*]', - inlined from 'static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*]' at /usr/include/c++/14/bits/alloc_traits.h:509:28, - inlined from 'std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:380:33, - inlined from 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*; _Alloc = std::allocator]' at /usr/include/c++/14/bits/vector.tcc:1013:40, - inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:1488:19, - inlined from 'void ncbi::objects::feature::CFeatTree::x_AssignGenes()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:2911:25: -/usr/include/c++/14/bits/new_allocator.h:151:55: note: at offset [-2147483648, -1] into destination object of size [4, 2147483644] allocated by 'operator new' - 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); - | ^ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, - inlined from 'static void ncbi::CSeqDBIdSet::x_SortAndUnique(std::vector&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1920:9: -/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1905 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1906 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1907 | __comp); - | ~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1908:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1908 | std::__final_insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/wgsmaster.cpp -o wgsmaster.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, - inlined from 'void ncbi::CSeqDBNegativeList::InsureOrder()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1625:18: -/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1905 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1906 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1907 | __comp); - | ~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1908:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1908 | std::__final_insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, - inlined from 'void ncbi::CSeqDBNegativeList::InsureOrder()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1626:18: -/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1905 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1906 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1907 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, - inlined from 'void ncbi::CSeqDBNegativeList::InsureOrder()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1626:18: -/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1822 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, - inlined from 'ncbi::CIntersectionGiList::CIntersectionGiList(ncbi::CSeqDBNegativeList&, std::vector&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1849:9: -/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1905 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1906 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1907 | __comp); - | ~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1908:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1908 | std::__final_insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1876 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1876 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::CSeqDB_SortGiLessThan]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, - inlined from 'void ncbi::s_InsureOrder(TVector&) [with TCompare = CSeqDB_SortGiLessThan; TVector = std::vector]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:604:13, - inlined from 'void ncbi::CSeqDBGiList::InsureOrder(ESortOrder)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:637:49: -/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1905 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1906 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1907 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::CSeqDB_SortGiLessThan]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, - inlined from 'void ncbi::s_InsureOrder(TVector&) [with TCompare = CSeqDB_SortGiLessThan; TVector = std::vector]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:604:13, - inlined from 'void ncbi::CSeqDBGiList::InsureOrder(ESortOrder)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:637:49: -/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1822 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::CSeqDB_SortTiLessThan]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, - inlined from 'void ncbi::s_InsureOrder(TVector&) [with TCompare = CSeqDB_SortTiLessThan; TVector = std::vector]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:604:13, - inlined from 'void ncbi::CSeqDBGiList::InsureOrder(ESortOrder)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:638:49: -/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1905 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1906 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1907 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::CSeqDB_SortTiLessThan]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, - inlined from 'void ncbi::s_InsureOrder(TVector&) [with TCompare = CSeqDB_SortTiLessThan; TVector = std::vector]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:604:13, - inlined from 'void ncbi::CSeqDBGiList::InsureOrder(ESortOrder)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:638:49: -/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1822 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, - inlined from 'ncbi::CIntersectionGiList::CIntersectionGiList(ncbi::CSeqDBGiList&, std::vector&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1815:9: -/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1905 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1906 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1907 | __comp); - | ~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1908:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1908 | std::__final_insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp -o weight.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp -o sequence.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp -o feature.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/indexer.cpp -o indexer.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/n/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'int ncbi::CSeqDBVol::GetAmbigPartialSeq(int, char**, int, ncbi::ESeqDBAllocType, ncbi::CSeqDB::TSequenceRanges*, ncbi::CSeqDB::TSequenceRanges*) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'int ncbi::CSeqDBVol::GetAmbigPartialSeq(int, char**, int, ncbi::ESeqDBAllocType, ncbi::CSeqDB::TSequenceRanges*, ncbi::CSeqDB::TSequenceRanges*) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:1542:50: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] 1542 | if ((*partial_ranges)[num_ranges - 1].second > base_length) { /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'int ncbi::CSeqDBVol::x_GetSequence(int, const char**) const': @@ -19558,60 +18993,40 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:2998:11: warning: variable 'map_end' set but not used [-Wunused-but-set-variable] 2998 | TIndx map_end = 0; | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp: In constructor 'ncbi::objects::CBlob_id::CBlob_id(ncbi::CTempString)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp:51:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 51 | catch (CStringException) { - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp:2436:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] - 2436 | if (offset > 0 && offset < m_MainTitle.length()) { - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ - -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/wgsmaster.cpp -o wgsmaster.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT - -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o -/us/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp: In function 'bool ncbi::objects::sequence::BadSeqLocSortOrder(const ncbi::objects::CBioseq_Handle&, const ncbi::objects::CSeq_loc&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:612:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] - 612 | } catch (CException) { - | ^~~~~~~~~~ +/us/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp: In constructor 'ncbi::objects::CBlob_id::CBlob_id(ncbi::CTempString)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp:51:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 51 | catch (CStringException) { + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const std::string&, std::vector >&, std::vector >&, std::vector&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:972:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable] + 972 | int found_short(-1); + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp: In function 'std::string ncbi::objects::{anonymous}::sx_ErrorSeqIds(ncbi::objects::CReaderRequestResult&, const std::vector&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:1155:37: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare] + 1155 | if (++total > kMaxErrorSeqIds) continue; + | ~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:1162:23: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare] + 1162 | if (total > kMaxErrorSeqIds) { + | ~~~~~~^~~~~~~~~~~~~~~~~ D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/seqref.cpp -o seqref.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp -o blob_id.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp -o reader_id1_base.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp -o reader_id2_base.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const std::string&, std::vector >&, std::vector >&, std::vector&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:972:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable] - 972 | int found_short(-1); - | ^~~~~~~~~~~ -In file included from /usr/include/c++/14/map:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/iterator.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:35: -/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CSeq_id_Handle; _Val = std::pair, ncbi::CRange > >; _KeyOfValue = std::_Select1st, ncbi::CRange > > >; _Compare = std::less; _Alloc = std::allocator, ncbi::CRange > > >]': -/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, ncbi::CRange > >, std::_Select1st, ncbi::CRange > > >, std::less, std::allocator, ncbi::CRange > > > >::const_iterator' changed in GCC 7.1 - 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CSeq_id_Handle; _Val = std::pair >, std::__cxx11::list > > >; _KeyOfValue = std::_Select1st >, std::__cxx11::list > > > >; _Compare = std::less; _Alloc = std::allocator >, std::__cxx11::list > > > >]': -/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree >, std::__cxx11::list > > >, std::_Select1st >, std::__cxx11::list > > > >, std::less, std::allocator >, std::__cxx11::list > > > > >::const_iterator' changed in GCC 7.1 -In file included from /usr/include/c++/14/map:63: -/usr/include/c++/14/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::pair >, std::__cxx11::list > >; _Compare = std::less; _Alloc = std::allocator >, std::__cxx11::list > > > >]': -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::__cxx11::list > > >, std::_Select1st >, std::__cxx11::list > > > >, std::less, std::allocator >, std::__cxx11::list > > > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/map:62, +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-In file included from /usr/include/c++/14/map:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, @@ -19724,24 +19139,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::pair, ncbi::CRange >; _Compare = std::less; _Alloc = std::allocator, ncbi::CRange > > >]', - inlined from 'void ncbi::objects::sequence::s_SeqLocToTotalRangeInfoMap(const ncbi::objects::CSeq_loc&, TTotalRangeInfoMap&, TSynMap&, ncbi::objects::CScope*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:1293:21: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, ncbi::CRange > >, std::_Select1st, ncbi::CRange > > >, std::less, std::allocator, ncbi::CRange > > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::pair, ncbi::CRange >; _Compare = std::less; _Alloc = std::allocator, ncbi::CRange > > >]', - inlined from 'void ncbi::objects::sequence::s_SeqLocToTotalRangeInfoMap(const ncbi::objects::CSeq_loc&, TTotalRangeInfoMap&, TSynMap&, ncbi::objects::CScope*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:1296:21: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, ncbi::CRange > >, std::_Select1st, ncbi::CRange > > >, std::less, std::allocator, ncbi::CRange > > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = ncbi::CRef >::CInfo, ncbi::CObjectCounterLocker>; _Compare = std::less; _Alloc = std::allocator >::CInfo, ncbi::CObjectCounterLocker> > >]', inlined from 'ncbi::objects::GBL::CInfoCache::TInfoLock ncbi::objects::GBL::CInfoCache::GetLoadLock(ncbi::objects::GBL::CInfoRequestor&, const key_type&, ncbi::objects::GBL::EDoNotWait) [with KeyType = ncbi::objects::CSeq_id_Handle; DataType = std::__cxx11::basic_string]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/data_loaders/genbank/impl/info_cache.hpp:634:40: /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >::CInfo, ncbi::CObjectCounterLocker> >, std::_Select1st >::CInfo, ncbi::CObjectCounterLocker> > >, std::less, std::allocator >::CInfo, ncbi::CObjectCounterLocker> > > >::const_iterator' changed in GCC 7.1 @@ -19760,24 +19157,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::pair >, std::__cxx11::list > >; _Compare = std::less; _Alloc = std::allocator >, std::__cxx11::list > > > >]', - inlined from 'void ncbi::objects::sequence::s_SeqLocToRangeInfoMapByStrand(const ncbi::objects::CSeq_loc&, TRangeInfoMapByStrand&, TSynMap&, ncbi::objects::CScope*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:1335:21: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::__cxx11::list > > >, std::_Select1st >, std::__cxx11::list > > > >, std::less, std::allocator >, std::__cxx11::list > > > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::pair >, std::__cxx11::list > >; _Compare = std::less; _Alloc = std::allocator >, std::__cxx11::list > > > >]', - inlined from 'void ncbi::objects::sequence::s_SeqLocToRangeInfoMapByStrand(const ncbi::objects::CSeq_loc&, TRangeInfoMapByStrand&, TSynMap&, ncbi::objects::CScope*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:1338:21: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::__cxx11::list > > >, std::_Select1st >, std::__cxx11::list > > > >, std::less, std::allocator >, std::__cxx11::list > > > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CSeq_id_Handle; _Val = std::pair::CInfo, ncbi::CObjectCounterLocker> >; _KeyOfValue = std::_Select1st::CInfo, ncbi::CObjectCounterLocker> > >; _Compare = std::less; _Alloc = std::allocator::CInfo, ncbi::CObjectCounterLocker> > >]': /usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree::CInfo, ncbi::CObjectCounterLocker> >, std::_Select1st::CInfo, ncbi::CObjectCounterLocker> > >, std::less, std::allocator::CInfo, ncbi::CObjectCounterLocker> > > >::const_iterator' changed in GCC 7.1 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: @@ -19894,24 +19273,6 @@ /usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree::CInfo, ncbi::CObjectCounterLocker> >, std::_Select1st::CInfo, ncbi::CObjectCounterLocker> > >, std::less, std::allocator::CInfo, ncbi::CObjectCounterLocker> > > >::const_iterator' changed in GCC 7.1 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/map:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbicntr.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiobj.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiargs.hpp:84, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiapp_api.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_param.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp:32: -/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CSeq_id_Handle; _Val = std::pair > >; _KeyOfValue = std::_Select1st > > >; _Compare = std::less; _Alloc = std::allocator > > >]': -/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree > >, std::_Select1st > > >, std::less, std::allocator > > > >::const_iterator' changed in GCC 7.1 - 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CBlob_id; _Tp = ncbi::CRef::CInfo, ncbi::CObjectCounterLocker>; _Compare = std::less; _Alloc = std::allocator::CInfo, ncbi::CObjectCounterLocker> > >]', inlined from 'bool ncbi::objects::GBL::CInfoCache::SetLoaded(ncbi::objects::GBL::CInfoRequestor&, const key_type&, const data_type&, ncbi::objects::GBL::EExpirationType) [with KeyType = ncbi::objects::CBlob_id; DataType = int]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/data_loaders/genbank/impl/info_cache.hpp:651:40: /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree::CInfo, ncbi::CObjectCounterLocker> >, std::_Select1st::CInfo, ncbi::CObjectCounterLocker> > >, std::less, std::allocator::CInfo, ncbi::CObjectCounterLocker> > > >::const_iterator' changed in GCC 7.1 @@ -19961,13 +19322,31 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp -o seqdbgilistset.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp -o seqdbexpert.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp -o seqdbblob.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIMcbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp -o create_defline.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/In file included from /usr/include/c++/14/map:63: +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIMIn file included from /usr/include/c++/14/map:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbicntr.hpp:40, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiobj.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiargs.hpp:84, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiapp_api.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_param.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp:32: +/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CSeq_id_Handle; _Val = std::pair > >; _KeyOfValue = std::_Select1st > > >; _Compare = std::less; _Alloc = std::allocator > > >]': +/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree > >, std::_Select1st > > >, std::less, std::allocator > > > >::const_iterator' changed in GCC 7.1 + 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp -o weight.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp -o sequence.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp -o feature.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/indexer.cpp -o indexer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/nIn file included from /usr/include/c++/14/map:63: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::pair >; _Compare = std::less; _Alloc = std::allocator > > >]', inlined from 'void ncbi::objects::CId2ReaderBase::x_ProcessGetSeqIdSeqId(ncbi::objects::CReaderRequestResult&, ncbi::objects::SId2LoadedSet&, const ncbi::objects::CID2_Reply&, const ncbi::objects::CSeq_id_Handle&, const ncbi::objects::CID2_Request_Get_Seq_id&, const ncbi::objects::CID2_Reply_Get_Seq_id*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp:2673:40: /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree > >, std::_Select1st > > >, std::less, std::allocator > > > >::const_iterator' changed in GCC 7.1 @@ -19986,71 +19365,75 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1824:61: required from here - 1824 | if (!in_html_tag && *str_iter == '<' && s_IsTagStart(str_iter, str.end())) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1752:57: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare] - 1752 | for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1114:13: warning: 'bool ncbi::objects::s_IsValidAccession(const std::string&)' defined but not used [-Wunused-function] - 1114 | static bool s_IsValidAccession(const string& acc) - | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb_lmdb.cpp: In member function 'void ncbi::CSeqDBLMDB::GetOidsForTaxIds(const std::set&, std::vector&, std::vector&) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb_lmdb.cpp:655:33: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] 655 | for (int i=0; i < oids_set.size(); i++) { | ~~^~~~~~~~~~~~~~~~~ -security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp:2436:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] + 2436 | if (offset > 0 && offset < m_MainTitle.length()) { + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ +E_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp -o seqdbcol.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp -o seqdbgimask.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp -o seqdbobj.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb_lmdb.cpp -o seqdb_lmdb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdblmdbset.cpp -o seqdblmdbset.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqidlist_reader.cpp -o seqidlist_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reprodsecurity -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o /bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp -ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o /bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp +ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lid2 -lseqsplit -lid1 -lseqset -lseq -lgeneral -lxser -lxconnect -lxcompress -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lid2 -lseqsplit -lid1 -lseqset -lseq -lgeneral -lxser -lxconnect -lxcompress -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread ) -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader.a -/bin/ln -f .ncbi_xreader-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader-static.dep /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libncbi_xreader.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader.so /bin/ln -f .ncbi_xreader.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader.a +/bin/ln -f .ncbi_xreader-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader-static.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -cd algo/segmask/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null +cd algo/segmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp: In function 'bool ncbi::objects::sequence::BadSeqLocSortOrder(const ncbi::objects::CBioseq_Handle&, const ncbi::objects::CSeq_loc&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:612:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] + 612 | } catch (CException) { + | ^~~~~~~~~~ make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -E_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp -o seqdbcol.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp -o seqdbgimask.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp -o seqdbobj.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb_lmdb.cpp -o seqdb_lmdb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdblmdbset.cpp -o seqdblmdbset.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqidlist_reader.cpp -o seqidlist_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/tax4blastsqlite.cpp -o tax4blastsqlite.o -/bin/rm -f libseqdb.so .libseqdb.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libseqdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o seqdb_lmdb.o seqdblmdbset.o seqidlist_reader.o tax4blastsqlite.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlitewrapp -lsqlite3 -llmdb -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libseqdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqdb.so -/bin/ln -f .seqdb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqdb.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -cd objmgr/split/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +In file included from /usr/include/c++/14/map:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/iterator.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:35: +/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CSeq_id_Handle; _Val = std::pair, ncbi::CRange > >; _KeyOfValue = std::_Select1st, ncbi::CRange > > >; _Compare = std::less; _Alloc = std::allocator, ncbi::CRange > > >]': +/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, ncbi::CRange > >, std::_Select1st, ncbi::CRange > > >, std::less, std::allocator, ncbi::CRange > > > >::const_iterator' changed in GCC 7.1 + 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CSeq_id_Handle; _Val = std::pair >, std::__cxx11::list > > >; _KeyOfValue = std::_Select1st >, std::__cxx11::list > > > >; _Compare = std::less; _Alloc = std::allocator >, std::__cxx11::list > > > >]': +/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree >, std::__cxx11::list > > >, std::_Select1st >, std::__cxx11::list > > > >, std::less, std::allocator >, std::__cxx11::list > > > > >::const_iterator' changed in GCC 7.1 +In file included from /usr/include/c++/14/map:63: +/usr/include/c++/14/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::pair >, std::__cxx11::list > >; _Compare = std::less; _Alloc = std::allocator >, std::__cxx11::list > > > >]': +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::__cxx11::list > > >, std::_Select1st >, std::__cxx11::list > > > >, std::less, std::allocator >, std::__cxx11::list > > > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask/segmask.cpp -o segmask.o /bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp @@ -20060,33 +19443,127 @@ /bin/ln -f .xalgosegmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgosegmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objmgr/split/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::pair, ncbi::CRange >; _Compare = std::less; _Alloc = std::allocator, ncbi::CRange > > >]', + inlined from 'void ncbi::objects::sequence::s_SeqLocToTotalRangeInfoMap(const ncbi::objects::CSeq_loc&, TTotalRangeInfoMap&, TSynMap&, ncbi::objects::CScope*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:1293:21: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, ncbi::CRange > >, std::_Select1st, ncbi::CRange > > >, std::less, std::allocator, ncbi::CRange > > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::pair, ncbi::CRange >; _Compare = std::less; _Alloc = std::allocator, ncbi::CRange > > >]', + inlined from 'void ncbi::objects::sequence::s_SeqLocToTotalRangeInfoMap(const ncbi::objects::CSeq_loc&, TTotalRangeInfoMap&, TSynMap&, ncbi::objects::CScope*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:1296:21: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, ncbi::CRange > >, std::_Select1st, ncbi::CRange > > >, std::less, std::allocator, ncbi::CRange > > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::pair >, std::__cxx11::list > >; _Compare = std::less; _Alloc = std::allocator >, std::__cxx11::list > > > >]', + inlined from 'void ncbi::objects::sequence::s_SeqLocToRangeInfoMapByStrand(const ncbi::objects::CSeq_loc&, TRangeInfoMapByStrand&, TSynMap&, ncbi::objects::CScope*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:1335:21: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::__cxx11::list > > >, std::_Select1st >, std::__cxx11::list > > > >, std::less, std::allocator >, std::__cxx11::list > > > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::pair >, std::__cxx11::list > >; _Compare = std::less; _Alloc = std::allocator >, std::__cxx11::list > > > >]', + inlined from 'void ncbi::objects::sequence::s_SeqLocToRangeInfoMapByStrand(const ncbi::objects::CSeq_loc&, TRangeInfoMapByStrand&, TSynMap&, ncbi::objects::CScope*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:1338:21: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::__cxx11::list > > >, std::_Select1st >, std::__cxx11::list > > > >, std::less, std::allocator >, std::__cxx11::list > > > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter.cpp -o blob_splitter.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_params.cpp -o blob_splitter_params.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/split_blob.cpp -o split_blob.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_impl.cpp -o blob_splitter_impl.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_parser.cpp -o blob_splitter_parser.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp -o objutil.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature_edit.cpp -o feature_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef.cpp -o autodef.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_feature_clause_base.cpp -o autodef_feature_clause_base.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_source_desc.cpp -o autodef_source_desc.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_available_modifier.cpp -o autodef_available_modifier.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE6/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp: In member function 'bool ncbi::objects::CAutoDefModifierCombo::AddQual(bool, int, bool)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp:1033:10: warning: unused variable 'added' [-Wunused-variable] - 1033 | bool added = false, rval = false; - | ^~~~~ +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_In file included from /usr/include/c++/14/bits/stl_algo.h:61, + from /usr/include/c++/14/algorithm:61, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbithr_conf.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimtx.hpp:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbireg.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/metareg.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33: +/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::CSeqDBGiList::STiOid; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, + | ^~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::CSeqDBGiList::SGiOid; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, + | ^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1770 | __insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1876 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1876 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/14/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1812 | __final_insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1822 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/map:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -20111,6 +19588,19 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, + inlined from 'static void ncbi::CSeqDBIdSet::x_SortAndUnique(std::vector&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1920:9: +/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1905 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1906 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1907 | __comp); + | ~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1908:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1908 | std::__final_insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CPlaceId; _Tp = ncbi::objects::CPlace_SplitInfo; _Compare = std::less; _Alloc = std::allocator >]', inlined from 'void ncbi::objects::CBlobSplitterImpl::CopySkeleton(ncbi::objects::CBioseq_set&, const ncbi::objects::CBioseq_set&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_parser.cpp:393:39: /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 @@ -20120,67 +19610,62 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blast_services_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_services_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp: In function 'ncbi::objects::SCacheInfo::TParams* ncbi::objects::GetDriverParams(SCacheInfo::TParams*)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1538:19: warning: possibly dangling reference to a temporary [-Wdangling-reference] - 1538 | const string& driver_name = - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1539:39: note: the temporary was destroyed at the end of the full expression 'ncbi::objects::SPluginParams::SetDefaultValue(params, std::__cxx11::basic_string(((const char*)"driver"), std::allocator()), ((const char*)"bdb"))' - 1539 | SPluginParams::SetDefaultValue(params, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ - 1540 | NCBI_GBLOADER_READER_CACHE_PARAM_DRIVER, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1541 | "bdb"); - | ~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/annot_piece.cpp: In member function 'std::multiset::iterator ncbi::objects::SIdAnnotPieces::Erase(std::multiset::iterator)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/annot_piece.cpp:221:35: note: parameter passing for argument of type 'std::multiset::iterator' {aka 'std::_Rb_tree, std::less, std::allocator >::const_iterator'} changed in GCC 7.1 + 221 | SIdAnnotPieces::TPieces::iterator SIdAnnotPieces::Erase(TPieces::iterator it) + | ^~~~~~~~~~~~~~ REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_maker.cpp -o blob_splitter_maker.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/id_range.cpp -o id_range.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/object_splitinfo.cpp -o object_splitinfo.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/asn_sizer.cpp -o asn_sizer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/annot_piece.cpp -o annot_piece.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/chunk_info.cpp -o chunk_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=644_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp -o autodef_mod_combo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_source_group.cpp -o autodef_source_group.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_feature_clause.cpp -o autodef_feature_clause.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o -/bin/rm -f libxobjutil.so .libxobjutil.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxobjutil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC weight.o sequence.o feature.o indexer.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o seq_trimmer.o bioseqgaps_ci.o objutil.o feature_edit.o autodef.o autodef_feature_clause_base.o autodef_source_desc.o autodef_available_modifier.o autodef_mod_combo.o autodef_source_group.o autodef_feature_clause.o autodef_options.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lseqset -lseq -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxobjutil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxobjutil.so -/bin/ln -f .xobjutil.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjutil.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/annot_piece.cpp: In member function 'std::multiset::iterator ncbi::objects::SIdAnnotPieces::Erase(std::multiset::iterator)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/annot_piece.cpp:221:35: note: parameter passing for argument of type 'std::multiset::iterator' {aka 'std::_Rb_tree, std::less, std::allocator >::const_iterator'} changed in GCC 7.1 - 221 | SIdAnnotPieces::TPieces::iterator SIdAnnotPieces::Erase(TPieces::iterator it) - | ^~~~~~~~~~~~~~ +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, + inlined from 'void ncbi::CSeqDBNegativeList::InsureOrder()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1625:18: +/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1905 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1906 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1907 | __comp); + | ~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1908:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1908 | std::__final_insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, + inlined from 'void ncbi::CSeqDBNegativeList::InsureOrder()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1626:18: +/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1905 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1906 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1907 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, + inlined from 'void ncbi::CSeqDBNegativeList::InsureOrder()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1626:18: +/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1822 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, + inlined from 'ncbi::CIntersectionGiList::CIntersectionGiList(ncbi::CSeqDBNegativeList&, std::vector&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1849:9: +/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1905 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1906 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1907 | __comp); + | ~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1908:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1908 | std::__final_insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_stack.hpp:37, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:42, @@ -20203,15 +19688,94 @@ /usr/include/c++/14/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = ncbi::objects::CBioseq_SplitInfo*]': /usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type 'std::move_iterator' changed in GCC 7.1 /usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type 'std::move_iterator' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1876 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1876 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = ncbi::objects::CSeq_hist_SplitInfo*]': /usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type 'std::move_iterator' changed in GCC 7.1 /usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type 'std::move_iterator' changed in GCC 7.1 +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::CSeqDB_SortGiLessThan]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, + inlined from 'void ncbi::s_InsureOrder(TVector&) [with TCompare = CSeqDB_SortGiLessThan; TVector = std::vector]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:604:13, + inlined from 'void ncbi::CSeqDBGiList::InsureOrder(ESortOrder)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:637:49: +/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1905 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1906 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1907 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::CSeqDB_SortGiLessThan]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, + inlined from 'void ncbi::s_InsureOrder(TVector&) [with TCompare = CSeqDB_SortGiLessThan; TVector = std::vector]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:604:13, + inlined from 'void ncbi::CSeqDBGiList::InsureOrder(ESortOrder)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:637:49: +/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1822 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::CSeqDB_SortTiLessThan]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, + inlined from 'void ncbi::s_InsureOrder(TVector&) [with TCompare = CSeqDB_SortTiLessThan; TVector = std::vector]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:604:13, + inlined from 'void ncbi::CSeqDBGiList::InsureOrder(ESortOrder)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:638:49: +/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1905 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1906 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1907 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::CSeqDB_SortTiLessThan]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, + inlined from 'void ncbi::s_InsureOrder(TVector&) [with TCompare = CSeqDB_SortTiLessThan; TVector = std::vector]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:604:13, + inlined from 'void ncbi::CSeqDBGiList::InsureOrder(ESortOrder)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:638:49: +/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1822 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_data_SplitInfo*]': /usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CBioseq_SplitInfo*]': +cbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp -o create_defline.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build//usr/include/c++/14/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CBioseq_SplitInfo*]': /usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, + inlined from 'ncbi::CIntersectionGiList::CIntersectionGiList(ncbi::CSeqDBGiList&, std::vector&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1815:9: +/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1905 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1906 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1907 | __comp); + | ~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1908:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1908 | std::__final_insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_descr_SplitInfo*]': /usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 @@ -20330,6 +19894,140 @@ /usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 137 | { return std::__do_uninit_copy(__first, __last, __result); } | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/bits/stl_algo.h:61, + from /usr/include/c++/14/algorithm:61, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/objistr.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:33: +/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::objects::feature::{anonymous}::SFeatRangeInfo; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, + | ^~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, + | ^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1770 | __insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::objects::feature::{anonymous}::SFeatRangeInfo; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, + | ^~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, + | ^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1770 | __insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1876 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1876 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, + | ^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 1770 | __insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +In file included from /usr/include/c++/14/algorithm:60: +/usr/include/c++/14/bits/stl_algobase.h: In function '_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Tp = pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val]': +/usr/include/c++/14/bits/stl_algobase.h:1488:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 1488 | __lower_bound(_ForwardIterator __first, _ForwardIterator __last, + | ^~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algobase.h:1488:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1824:61: required from here + 1824 | if (!in_html_tag && *str_iter == '<' && s_IsTagStart(str_iter, str.end())) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1752:57: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare] + 1752 | for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function '_ForwardIterator std::__upper_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Tp = pair >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 1980 | __upper_bound(_ForwardIterator __first, _ForwardIterator __last, + | ^~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__merge_without_buffer(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:2435:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2435 | __merge_without_buffer(_BidirectionalIterator __first, + | ^~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2435:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:2435:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:2460:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2460 | = std::__lower_bound(__middle, __last, *__first_cut, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2461 | __gnu_cxx::__ops::__iter_comp_val(__comp)); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2469:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2469 | = std::__upper_bound(__first, __middle, *__second_cut, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2470 | __gnu_cxx::__ops::__val_comp_iter(__comp)); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function '_FIter std::_V2::rotate(_FIter, _FIter, _FIter) [with _FIter = __gnu_cxx::__normal_iterator >*, std::vector > > >]', + inlined from 'void std::__merge_without_buffer(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:2475:15: +/usr/include/c++/14/bits/stl_algo.h:1357:27: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 1357 | return std::__rotate(__first, __middle, __last, + | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1358 | std::__iterator_category(__first)); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__merge_without_buffer(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:2476:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2476 | std::__merge_without_buffer(__first, __first_cut, __new_middle, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2477 | __len11, __len22, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2478:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2478 | std::__merge_without_buffer(__new_middle, __second_cut, __last, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2479 | __len1 - __len11, __len2 - __len22, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__inplace_stable_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:2743:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2743 | __inplace_stable_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2743:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:2748:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2748 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2752:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2752 | std::__inplace_stable_sort(__first, __middle, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2753:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2753 | std::__inplace_stable_sort(__middle, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2754:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2754 | std::__merge_without_buffer(__first, __middle, __last, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2755 | __middle - __first, + | ~~~~~~~~~~~~~~~~~~~ + 2756 | __last - __middle, + | ~~~~~~~~~~~~~~~~~~ + 2757 | __comp); + | ~~~~~~~ -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/size.cpp -o size.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o /bin/rm -f libid2_split.so .libid2_split.so.stamp @@ -20338,24 +20036,302 @@ /bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid2_split.so /bin/ln -f .id2_split.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id2_split.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__merge_adaptive_resize(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Pointer, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:2382:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2382 | __merge_adaptive_resize(_BidirectionalIterator __first, + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2382:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:2382:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:2390:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2390 | std::__merge_adaptive(__first, __middle, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2391 | __len1, __len2, __buffer, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2403:37: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2403 | = std::__lower_bound(__middle, __last, *__first_cut, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2404 | __gnu_cxx::__ops::__iter_comp_val(__comp)); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2412:37: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2412 | = std::__upper_bound(__first, __middle, *__second_cut, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2413 | __gnu_cxx::__ops::__val_comp_iter(__comp)); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function '_FIter std::_V2::rotate(_FIter, _FIter, _FIter) [with _FIter = __gnu_cxx::__normal_iterator >*, std::vector > > >]', + inlined from '_BidirectionalIterator1 std::__rotate_adaptive(_BidirectionalIterator1, _BidirectionalIterator1, _BidirectionalIterator1, _Distance, _Distance, _BidirectionalIterator2, _Distance) [with _BidirectionalIterator1 = __gnu_cxx::__normal_iterator >*, vector > > >; _BidirectionalIterator2 = pair >*; _Distance = int]' at /usr/include/c++/14/bits/stl_algo.h:2352:20, + inlined from 'void std::__merge_adaptive_resize(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Pointer, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:2418:30: +/usr/include/c++/14/bits/stl_algo.h:1357:27: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 1357 | return std::__rotate(__first, __middle, __last, + | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1358 | std::__iterator_category(__first)); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__merge_adaptive_resize(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Pointer, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:2421:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2421 | std::__merge_adaptive_resize(__first, __first_cut, __new_middle, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2422 | __len11, __len22, + | ~~~~~~~~~~~~~~~~~ + 2423 | __buffer, __buffer_size, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2424:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2424 | std::__merge_adaptive_resize(__new_middle, __second_cut, __last, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2425 | _Distance(__len1 - __len11), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2426 | _Distance(__len2 - __len22), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2427 | __buffer, __buffer_size, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/include/c++/14/bits/stl_algo.h: In function '_OutputIterator std::__move_merge(_InputIterator, _InputIterator, _InputIterator, _InputIterator, _OutputIterator, _Compare) [with _InputIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _OutputIterator = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:2607:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2607 | __move_merge(_InputIterator __first1, _InputIterator __last1, + | ^~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2607:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:2607:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:2607:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function '_OutputIterator std::__move_merge(_InputIterator, _InputIterator, _InputIterator, _InputIterator, _OutputIterator, _Compare) [with _InputIterator = pair >*; _OutputIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:2607:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1114:13: warning: 'bool ncbi::objects::s_IsValidAccession(const std::string&)' defined but not used [-Wunused-function] + 1114 | static bool s_IsValidAccession(const string& acc) + | ^~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__merge_sort_with_buffer(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:2674:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2674 | __merge_sort_with_buffer(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2674:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +In function 'void std::__chunk_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Distance, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::__merge_sort_with_buffer(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:2685:34: +/usr/include/c++/14/bits/stl_algo.h:2664:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2664 | std::__insertion_sort(__first, __first + __chunk_size, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2667:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2667 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2667:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +In function 'void std::__merge_sort_loop(_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _Distance, _Compare) [with _RandomAccessIterator1 = __gnu_cxx::__normal_iterator >*, vector > > >; _RandomAccessIterator2 = pair >*; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::__merge_sort_with_buffer(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:2689:26: +/usr/include/c++/14/bits/stl_algo.h:2642:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2642 | __result = std::__move_merge(__first, __first + __step_size, + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2643 | __first + __step_size, + | ~~~~~~~~~~~~~~~~~~~~~~ + 2644 | __first + __two_step, + | ~~~~~~~~~~~~~~~~~~~~~ + 2645 | __result, __comp); + | ~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2642:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:2650:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2650 | std::__move_merge(__first, __first + __step_size, + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2651 | __first + __step_size, __last, __result, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2650:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +In function 'void std::__merge_sort_loop(_RandomAccessIterator1, _RandomAccessIterator1, _RandomAccessIterator2, _Distance, _Compare) [with _RandomAccessIterator1 = pair >*; _RandomAccessIterator2 = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::__merge_sort_with_buffer(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:2692:26: +/usr/include/c++/14/bits/stl_algo.h:2642:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2642 | __result = std::__move_merge(__first, __first + __step_size, + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2643 | __first + __step_size, + | ~~~~~~~~~~~~~~~~~~~~~~ + 2644 | __first + __two_step, + | ~~~~~~~~~~~~~~~~~~~~~ + 2645 | __result, __comp); + | ~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2650:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2650 | std::__move_merge(__first, __first + __step_size, + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2651 | __first + __step_size, __last, __result, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2650:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__stable_sort_adaptive(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Pointer = pair >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:2700:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2700 | __stable_sort_adaptive(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2700:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:2700:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:2705:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2705 | std::__merge_sort_with_buffer(__first, __middle, __buffer, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2706:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2706 | std::__merge_sort_with_buffer(__middle, __last, __buffer, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2708:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2708 | std::__merge_adaptive(__first, __middle, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2709 | __middle - __first, __last - __middle, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2710 | __buffer, __comp); + | ~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__stable_sort_adaptive_resize(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Distance, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Pointer = pair >*; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:2716:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2716 | __stable_sort_adaptive_resize(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2716:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:2725:45: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2725 | std::__stable_sort_adaptive_resize(__first, __middle, __buffer, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2726 | __buffer_size, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2727:45: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2727 | std::__stable_sort_adaptive_resize(__middle, __last, __buffer, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2728 | __buffer_size, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2729:39: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2729 | std::__merge_adaptive_resize(__first, __middle, __last, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2730 | _Distance(__middle - __first), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2731 | _Distance(__last - __middle), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2732 | __buffer, __buffer_size, + | ~~~~~~~~~~~~~~~~~~~~~~~~ + 2733 | __comp); + | ~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:2736:36: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 2736 | std::__stable_sort_adaptive(__first, __middle, __last, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2737 | __buffer, __comp); + | ~~~~~~~~~~~~~~~~~ +In function 'void std::__stable_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::stable_sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >*, vector > > >; _Compare = ncbi::objects::sequence::COverlapPairLess]' at /usr/include/c++/14/bits/stl_algo.h:5029:36, + inlined from 'void ncbi::objects::sequence::GetOverlappingFeatures(const ncbi::objects::CSeq_loc&, ncbi::objects::CSeqFeatData_Base::E_Choice, ncbi::objects::CSeqFeatData::ESubtype, EOverlapType, TFeatScores&, ncbi::objects::CScope&, TBestFeatOpts, CGetOverlappingFeaturesPlugin*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:1203:21: +/usr/include/c++/14/bits/stl_algo.h:4948:15: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 4948 | _TmpBuf __buf(__first, (__last - __first + 1) / 2); + | ^~~~~ +/usr/include/c++/14/bits/stl_algo.h:4951:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 4951 | std::__stable_sort_adaptive(__first, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ + 4952 | __first + _DistanceType(__buf.size()), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 4953 | __last, __buf.begin(), __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:4955:35: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 4955 | std::__inplace_stable_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:4957:43: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector > > >' changed in GCC 7.1 + 4957 | std::__stable_sort_adaptive_resize(__first, __last, __buf.begin(), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 4958 | _DistanceType(__buf.size()), __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::objects::feature::{anonymous}::PLessByEnd]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, + inlined from 'ncbi::objects::feature::{anonymous}::TRangeArray& ncbi::objects::feature::{anonymous}::CFeatTreeParentTypeIndex::GetIndex(ncbi::objects::feature::{anonymous}::TCanonicalIdsMap&, const ncbi::objects::feature::{anonymous}::TInfoArray&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:1876:17, + inlined from 'ncbi::objects::feature::{anonymous}::TRangeArray& ncbi::objects::feature::CFeatTreeIndex::GetIndex(ncbi::objects::CSeqFeatData::ESubtype, bool, const ncbi::objects::feature::{anonymous}::TInfoArray&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:1904:31: +/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1905 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1906 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1907 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::objects::feature::{anonymous}::PLessByEnd]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, + inlined from 'ncbi::objects::feature::{anonymous}::TRangeArray& ncbi::objects::feature::{anonymous}::CFeatTreeParentTypeIndex::GetIndex(ncbi::objects::feature::{anonymous}::TCanonicalIdsMap&, const ncbi::objects::feature::{anonymous}::TInfoArray&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:1876:17, + inlined from 'ncbi::objects::feature::{anonymous}::TRangeArray& ncbi::objects::feature::CFeatTreeIndex::GetIndex(ncbi::objects::CSeqFeatData::ESubtype, bool, const ncbi::objects::feature::{anonymous}::TInfoArray&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:1904:31: +/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1822 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp: In function 'ncbi::objects::SCacheInfo::TParams* ncbi::objects::GetDriverParams(SCacheInfo::TParams*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1538:19: warning: possibly dangling reference to a temporary [-Wdangling-reference] + 1538 | const string& driver_name = + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1539:39: note: the temporary was destroyed at the end of the full expression 'ncbi::objects::SPluginParams::SetDefaultValue(params, std::__cxx11::basic_string(((const char*)"driver"), std::allocator()), ((const char*)"bdb"))' + 1539 | SPluginParams::SetDefaultValue(params, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ + 1540 | NCBI_GBLOADER_READER_CACHE_PARAM_DRIVER, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1541 | "bdb"); + | ~~~~~~ +ucible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/tax4blastsqlite.cpp -o tax4blastsqlite.o +/bin/rm -f libseqdb.so .libseqdb.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libseqdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o seqdb_lmdb.o seqdblmdbset.o seqidlist_reader.o tax4blastsqlite.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlitewrapp -lsqlite3 -llmdb -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libseqdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqdb.so +/bin/ln -f .seqdb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqdb.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::objects::feature::{anonymous}::PLessByStart]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, + inlined from 'void ncbi::objects::feature::s_CollectBestOverlaps(CFeatTree::TFeatArray&, {anonymous}::TBestArray&, const STypeLink&, {anonymous}::TRangeArray&, CFeatTree*, {anonymous}::TCanonicalIdsMap&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:2531:9: +/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1905 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1906 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1907 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::objects::feature::{anonymous}::PLessByStart]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, + inlined from 'void ncbi::objects::feature::s_CollectBestOverlaps(CFeatTree::TFeatArray&, {anonymous}::TBestArray&, const STypeLink&, {anonymous}::TRangeArray&, CFeatTree*, {anonymous}::TCanonicalIdsMap&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:2531:9: +/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1822 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/algorithm:60: +In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*; _Up = ncbi::objects::feature::CFeatTree::CFeatInfo*; bool _IsMove = false]', + inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = ncbi::objects::feature::CFeatTree::CFeatInfo**; _OI = ncbi::objects::feature::CFeatTree::CFeatInfo**]' at /usr/include/c++/14/bits/stl_algobase.h:521:30, + inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = ncbi::objects::feature::CFeatTree::CFeatInfo**; _OI = ncbi::objects::feature::CFeatTree::CFeatInfo**]' at /usr/include/c++/14/bits/stl_algobase.h:548:42, + inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator >; _OI = ncbi::objects::feature::CFeatTree::CFeatInfo**]' at /usr/include/c++/14/bits/stl_algobase.h:555:31, + inlined from '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator >; _OI = ncbi::objects::feature::CFeatTree::CFeatInfo**]' at /usr/include/c++/14/bits/stl_algobase.h:651:7, + inlined from 'static _ForwardIterator std::__uninitialized_copy::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::feature::CFeatTree::CFeatInfo**]' at /usr/include/c++/14/bits/stl_uninitialized.h:147:27, + inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::feature::CFeatTree::CFeatInfo**]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, + inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::feature::CFeatTree::CFeatInfo**; _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, + inlined from 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*; _Alloc = std::allocator]' at /usr/include/c++/14/bits/vector.tcc:1022:38, + inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:1488:19, + inlined from 'void ncbi::objects::feature::CFeatTree::x_AssignGenes()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:2911:25: +/usr/include/c++/14/bits/stl_algobase.h:452:30: warning: 'void* __builtin_memmove(void*, const void*, unsigned int)' writing between 5 and 2147483644 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] + 452 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/arm-linux-gnueabihf/c++/14/bits/c++allocator.h:33, + from /usr/include/c++/14/bits/allocator.h:46, + from /usr/include/c++/14/string:43, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:216: +In member function '_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*]', + inlined from 'static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*]' at /usr/include/c++/14/bits/alloc_traits.h:509:28, + inlined from 'std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:380:33, + inlined from 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*; _Alloc = std::allocator]' at /usr/include/c++/14/bits/vector.tcc:1013:40, + inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = ncbi::objects::feature::CFeatTree::CFeatInfo*; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:1488:19, + inlined from 'void ncbi::objects::feature::CFeatTree::x_AssignGenes()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp:2911:25: +/usr/include/c++/14/bits/new_allocator.h:151:55: note: at offset [-2147483648, -1] into destination object of size [4, 2147483644] allocated by 'operator new' + 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); + | ^ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o /bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp -ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o /bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp +ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_cache.a @@ -20365,59 +20341,32 @@ /bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:49:74: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 49 | CSeqFormatterConfig config /* = CSeqFormatterConfig() */) - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:270:72: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 270 | void CSeqFormatter::DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config) - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ +cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp -o objutil.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature_edit.cpp -o feature_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef.cpp -o autodef.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_feature_clause_base.cpp -o autodef_feature_clause_base.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_source_desc.cpp -o autodef_source_desc.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_available_modifier.cpp -o autodef_available_modifier.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE6/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp: In member function 'bool ncbi::objects::CAutoDefModifierCombo::AddQual(bool, int, bool)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp:1033:10: warning: unused variable 'added' [-Wunused-variable] + 1033 | bool added = false, rval = false; + | ^~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o /bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp -ar cr libncbi_xreader_id1.a reader_id1.o /bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp +ar cr libncbi_xreader_id1.a reader_id1.o /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid1 -lseq -lgeneral -lxser -lxconnect -lxutil -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid1 -lseq -lgeneral -lxser -lxconnect -lxutil -lxncbi -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id1.a @@ -20427,90 +20376,17 @@ /bin/ln -f .ncbi_xreader_id1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -In file included from /usr/include/c++/14/map:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/invalid_data_exception.hpp:31, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:34: -/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]': -/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o -/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp -ar cr libncbi_xreader_id2.a reader_id2.o -/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ) -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.a -/bin/ln -f .ncbi_xreader_id2-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.so -/bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -cd objtools/edit/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=edit UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -In file included from /usr/include/c++/14/map:63: -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'void ncbi::CBlastDBExtractor::x_SetGi2AccMap()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:267:22: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'std::string ncbi::CBlastDBExtractor::ExtractAccession()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:332:36: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'void ncbi::CBlastDBExtractor::x_SetGi2SeqIdMap()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:292:25: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'void ncbi::CBlastDBExtractor::x_SetGi2SeqIdMap()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:295:25: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /usr/include/c++/14/map:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -20526,15 +20402,6 @@ /usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'std::string ncbi::CBlastDBExtractor::ExtractSeqId()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:348:41: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/map:63: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = long long int; _Tp = int; _Compare = std::less; _Alloc = std::allocator >]', inlined from 'virtual ncbi::TTaxId ncbi::objects::CLocalBlastDbAdapter::GetTaxId(const ncbi::objects::CSeq_id_Handle&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp:62:49: @@ -20545,189 +20412,45 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'void ncbi::CBlastDBExtractor::x_SetGi2TitleMap()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:320:24: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'std::string ncbi::CBlastDBExtractor::ExtractTitle()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:375:41: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]': -/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 - 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = int; _Compare = std::less; _Alloc = std::allocator >]', - inlined from 'ncbi::TTaxId ncbi::CBlastDBExtractor::x_ExtractTaxId()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:752:41: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp: In member function 'void ncbi::objects::edit::CPromote::x_PromoteCdregion(ncbi::objects::CSeq_feat&, TRnaMap*) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:224:51: warning: 'static void ncbi::objects::CCdregion_translate::TranslateCdregion(std::string&, const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, bool, bool, bool*, ETranslationLengthProblemOptions)' is deprecated [-Wdeprecated-declarations] - 224 | CCdregion_translate::TranslateCdregion(data, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ - 225 | feat, - | ~~~~~ - 226 | x_Scope(), - | ~~~~~~~~~~ - 227 | include_stop, - | ~~~~~~~~~~~~~ - 228 | remove_trailingX); - | ~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:52: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:966:17: note: declared here - 966 | static void TranslateCdregion(string& prot, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::ConvertRawToDeltaByNs(ncbi::objects::CSeq_inst&, size_t, int, size_t, int, bool, int, int, int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1850:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 1850 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { - | ~~~~~~^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1852:74: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 1852 | } else if (n_len >= min_known && (max_known < 0 || n_len <= max_known)) { - | ~~~~~~^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1875:63: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 1875 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { - | ~~~~~~^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1877:66: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 1877 | } else if (n_len >= min_known && (max_known < 0 || n_len <= max_known)) { - | ~~~~~~^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::UpdateSeqLength(ncbi::CAutoInitRef&, ncbi::objects::CBioseq_Handle&, ncbi::objects::CSeqMap_CI&, ncbi::objects::CSeq_inst_Base::TLength&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqSubMap' not handled in switch [-Wswitch] - 2458 | switch (seqmap_ci.GetType()) { - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqRef' not handled in switch [-Wswitch] -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqEnd' not handled in switch [-Wswitch] -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqChunk' not handled in switch [-Wswitch] -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqLiteral' not handled in switch [-Wswitch] -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'bool ncbi::objects::edit::s_FindSegment(const ncbi::objects::CDense_seg&, ncbi::objects::CDense_seg_Base::TDim, ncbi::TSeqPos, ncbi::objects::CDense_seg_Base::TNumseg&, ncbi::TSeqPos&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2881:21: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] - 2881 | if (pos >= start && pos < start + len) { - | ~~~~^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2881:39: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] - 2881 | if (pos >= start && pos < start + len) { - | ~~~~^~~~~~~~~~~~~ -In file included from /usr/include/c++/14/map:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:32: -/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CBioseq_Handle; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]': -/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/map:63: -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CBioseq_Handle; _Tp = ncbi::CConstRef; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'void ncbi::objects::edit::CPromote::x_CopyCdregionToRNA(const ncbi::objects::CSeq_feat&, ncbi::objects::CBioseq_Handle&, TRnaMap*) const' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:318:49: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CBioseq_Handle; _Tp = ncbi::CConstRef; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'void ncbi::objects::edit::CPromote::x_PromoteFeatures(ncbi::objects::CSeq_annot&) const' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:163:36: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp -o blastdb_formatter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o -/bin/rm -f libblastdb_format.so .libblastdb_format.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libblastdb_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lxobjmgr -lseq -lxser -lsequtil -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblastdb_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblastdb_format.so -/bin/ln -f .blastdb_format.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastdb_format.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o +/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp +/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp +ar cr libncbi_xreader_id2.a reader_id2.o +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ) +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.a +/bin/ln -f .ncbi_xreader_id2-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.so +/bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o -/bin/rm -f libncbi_xloader_blastdb.so .libncbi_xloader_blastdb.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_blastdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC bdbloader.o cached_sequence.o local_blastdb_adapter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjmgr -lseqset -lseq -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xloader_blastdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_blastdb.so -/bin/ln -f .ncbi_xloader_blastdb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_blastdb.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gene_utils.cpp -o gene_utils.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp -o seq_entry_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp -o promote.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/autodef_with_tax.cpp -o autodef_with_tax.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/field_handler.cpp -o field_handler.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbiIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +4_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp -o autodef_mod_combo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_source_group.cpp -o autodef_source_group.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_feature_clause.cpp -o autodef_feature_clause.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o +/bin/rm -f libxobjutil.so .libxobjutil.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxobjutil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC weight.o sequence.o feature.o indexer.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o seq_trimmer.o bioseqgaps_ci.o objutil.o feature_edit.o autodef.o autodef_feature_clause_base.o autodef_source_desc.o autodef_available_modifier.o autodef_mod_combo.o autodef_source_group.o autodef_feature_clause.o autodef_options.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lseqset -lseq -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxobjutil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxobjutil.so +/bin/ln -f .xobjutil.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjutil.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /usr/include/c++/14/bits/stl_algo.h:61, from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, @@ -20743,11 +20466,18 @@ /usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1770 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j4 --jobserver-auth=7,8 all /usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1876 | __introsort_loop(_RandomAccessIterator __first, @@ -20756,145 +20486,29 @@ /usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestNoFormatSpecifier::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:54:41: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 54 | BOOST_REQUIRE_THROW(CSeqFormatter f(format_spec, db, std::cout), - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/test_boost.hpp:123:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL_EX' - 123 | S; \ - | ^ -/usr/include/boost/test/tools/old/interface.hpp:120:45: note: in expansion of macro 'BOOST_CHECK_THROW_IMPL' - 120 | #define BOOST_REQUIRE_THROW( S, E ) BOOST_CHECK_THROW_IMPL( S, E, true, "", REQUIRE ) - | ^~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_Empty::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:122:57: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 122 | #define NcbiEmptyString NCBI_NS_NCBI::CNcbiEmptyString::Get() - | ^~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/test_boost.hpp:123:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL_EX' - 123 | S; \ - | ^ -/usr/include/boost/test/tools/old/interface.hpp:120:45: note: in expansion of macro 'BOOST_CHECK_THROW_IMPL' - 120 | #define BOOST_REQUIRE_THROW( S, E ) BOOST_CHECK_THROW_IMPL( S, E, true, "", REQUIRE ) - | ^~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:123:19: note: in expansion of macro 'NcbiEmptyString' - 123 | #define kEmptyStr NcbiEmptyString - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:61:41: note: in expansion of macro 'kEmptyStr' - 61 | BOOST_REQUIRE_THROW(CSeqFormatter f(kEmptyStr, db, std::cout), - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_InvalidAlgoId::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:68:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 68 | CSeqFormatterConfig config; - | ^~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:70:40: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 70 | BOOST_REQUIRE_THROW(CSeqFormatter f("%m", db, std::cout, config), - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/test_boost.hpp:123:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL_EX' - 123 | S; \ - | ^ -/usr/include/boost/test/tools/old/interface.hpp:120:45: note: in expansion of macro 'BOOST_CHECK_THROW_IMPL' - 120 | #define BOOST_REQUIRE_THROW( S, E ) BOOST_CHECK_THROW_IMPL( S, E, true, "", REQUIRE ) - | ^~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestValidFormatSpecifiers::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:77:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 77 | CSeqFormatterConfig config; - | ^~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:93:24: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 93 | CSeqFormatter f(*itr, db, std::cout, config); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:97:20: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 97 | CSeqFormatter f("%m", db, std::cout, config); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiOidLength::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:108:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 108 | CSeqFormatter f(format_spec, db, out); - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqId::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:150:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 150 | CSeqFormatter f(format_spec, db, out); - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqIdLong::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:191:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 191 | CSeqFormatter f(format_spec, db, out); - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestAccessionPIGTaxidTitle::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:223:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 223 | CSeqFormatter f(format_spec, db, out); - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiGivenPIG::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:254:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 254 | CSeqFormatter f(format_spec, db, out); - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSequenceDataLength::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:279:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 279 | CSeqFormatter f(format_spec, db, out); - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedFasta::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:309:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 309 | CSeqFormatterConfig config; - | ^~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:314:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 314 | CSeqFormatter f(format_spec, db, out, config); - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedSequenceData::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:353:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 353 | CSeqFormatterConfig config; - | ^~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:356:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 356 | CSeqFormatter f(format_spec, db, out, config); - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o +/bin/rm -f libncbi_xloader_blastdb.so .libncbi_xloader_blastdb.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_blastdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC bdbloader.o cached_sequence.o local_blastdb_adapter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjmgr -lseqset -lseq -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xloader_blastdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_blastdb.so +/bin/ln -f .ncbi_xloader_blastdb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_blastdb.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +cd objtools/seqmasks_io/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, inlined from 'void ncbi::CBinaryListBuilder::Write(ncbi::CNcbiOstream&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb.cpp:244:9: @@ -20921,45 +20535,13 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp -o writedb_volume.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp -o writedb_files.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp -o writedb_isam.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp -o seq_formatter_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seq_writer_unit_test.o seq_formatter_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastdb_format -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o blastdb_format_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_format_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In constructor 'ncbi::objects::edit::CSeqIdGuesser::CSeqIdGuesser(ncbi::objects::CSeq_entry_Handle)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:92:48: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] - 92 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); - | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/serialbase.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/general/Dbtag_.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/general/Dbtag.hpp:44, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:31: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here - 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, - | ^~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In static member function 'static std::vector > ncbi::objects::edit::CSeqIdGuesser::GetIdStrings(ncbi::objects::CBioseq_Handle)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:171:44: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] - 171 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); - | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here - 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, - | ^~~~ -In file included from /usr/include/c++/14/algorithm:61, +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp -o mask_fasta_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFIn file included from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbictype.hpp:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistre.hpp:39, @@ -21028,24 +20610,6 @@ /usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1822 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o gene_info_reader -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_reader -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. In file included from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, @@ -21103,60 +20667,71 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp -o writedb_general.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp -o mask_info_registry.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/apply_object.cpp -o apply_object.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/string_constraint.cpp -o string_constraint.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp -o seqid_guesser.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/dblink_field.cpp -o dblink_field.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/struc_comm_field.cpp -o struc_comm_field.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_desc_field.cpp -o text_desc_field.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_demo -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_demo -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=tax4blast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/tax4blast.cpp -o tax4blast.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tax4blast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lsqlitewrapp -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lsqlite3 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tax4blast -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tax4blast -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'void CSeqDBPerfApp::x_UpdateMemoryUsage(int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:114:23: warning: 'bool ncbi::GetMemoryUsage(size_t*, size_t*, size_t*)' is deprecated [-Wdeprecated-declarations] - 114 | if (GetMemoryUsage(&mu.total, &mu.resident, &mu.shared)) { - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:511:13: note: declared here - 511 | extern bool GetMemoryUsage(size_t* total, size_t* resident, size_t* shared); - | ^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'int CSeqDBPerfApp::x_ScanDatabase()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:154:31: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 154 | for (ssize_t i = 0; i < oids2iterate.size(); i++) { - | ~~^~~~~~~~~~~~~~~~~~~~~ +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/Y_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o +/bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libseqmasks_io.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libseqmasks_io.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqmasks_io.so +/bin/ln -f .seqmasks_io.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqmasks_io.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +cd algo/blast/dbindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 52 | objects::CFastaReader::fAllSeqIds; + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/fasta.hpp:93:9: note: declared here + 93 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 52 | objects::CFastaReader::fAllSeqIds; + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/fasta.hpp:93:9: note: declared here + 93 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(TSeqData&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:47: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] + 658 | string idstr = objects::sequence::GetTitle( bsh ); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:290:8: note: declared here + 290 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable] + 306 | unsigned long tmp; + | ^~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blast_services_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_services_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +cd algo/winmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /usr/include/c++/14/map:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -21173,19 +20748,6 @@ /usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp: In function 'bool ncbi::objects::edit::AdjustForCDSPartials(const ncbi::objects::CSeq_feat&, ncbi::objects::CSeq_entry_Handle)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:457:57: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] - 457 | any_change |= AdjustProteinMolInfoToMatchCDS((*it)->SetMolinfo(), cds); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here - 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:463:39: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] - 463 | AdjustProteinMolInfoToMatchCDS(new_molinfo_desc->SetMolinfo(), cds); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here - 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp: In member function 'void ncbi::CWriteDB_LMDB::x_CommitTransaction()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp:295:55: warning: 'unsigned int ncbi::GetCpuCount()' is deprecated [-Wdeprecated-declarations] 295 | unsigned int num_threads = GetCpuCount(); @@ -21195,24 +20757,36 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:479:14: note: declared here 479 | unsigned int GetCpuCount(void) | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_perf -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_perf -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -cd objtools/seqmasks_io/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_score_mean.cpp -o seq_masker_score_mean.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp: In member function 'double ncbi::CSeqMasker::MergeAvg(std::__cxx11::list::iterator, const std::__cxx11::list::iterator&, Uint4) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:412:8: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 + 412 | double CSeqMasker::MergeAvg( TMList::iterator mi, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp: In member function 'void ncbi::CSeqMasker::Merge(TMList&, std::__cxx11::list::iterator, TMList&, std::__cxx11::list::iterator&) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:426:6: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 + 426 | void CSeqMasker::Merge( TMList & m, TMList::iterator mi, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp: In member function 'ncbi::CSeqMasker::TMaskList* ncbi::CSeqMasker::DoMask(const ncbi::objects::CSeqVector&, ncbi::TSeqPos, ncbi::TSeqPos) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:313:32: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 + 313 | lavg = MergeAvg( k, tmp, unit_size ); + | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:319:32: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 + 319 | ravg = MergeAvg( ii, j, unit_size ); + | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:336:42: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 + 336 | k->avg = MergeAvg( k, --j, unit_size ); + | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:362:34: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 + 362 | k->avg = MergeAvg( k, --j, unit_size ); + | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:394:34: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 + 394 | k->avg = MergeAvg( k, j, unit_size ); + | ~~~~~~~~^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/map:63: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = long long int; _Compare = std::less; _Alloc = std::allocator >]', inlined from 'bool ncbi::CBuildDatabase::AddIds(const std::vector >&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:1375:41: @@ -21245,165 +20819,17 @@ /bin/ln -f .writedb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.writedb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -cd algo/blast/dbindex/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp -o mask_fasta_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gb_block_field.cpp -o gb_block_field.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp -o link_cds_mrna.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp -o cds_fix.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/loc_edit.cpp -o loc_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/mail_report.cpp -o mail_report.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feattable_edit.cpp -o feattable_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFI/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 52 | objects::CFastaReader::fAllSeqIds; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/fasta.hpp:93:9: note: declared here - 93 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 52 | objects::CFastaReader::fAllSeqIds; - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/fasta.hpp:93:9: note: declared here - 93 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable] - 306 | unsigned long tmp; - | ^~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp: In member function 'bool ncbi::objects::edit::CFindITSParser::IsLengthTooLarge(const std::string&, int, int, const std::vector&, const std::vector&, const std::vector&, int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp:259:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 259 | for (int j = i + 1; j < spans.size(); j++) - | ~~^~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/bits/stl_algobase.h:71, - from /usr/include/c++/14/algorithm:60, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/serialbase.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/general/Object_id_.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/general/Object_id.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feattable_edit.cpp:35: -/usr/include/c++/14/bits/predefined_ops.h: In function 'constexpr bool __gnu_cxx::__ops::_Iter_comp_iter<_Compare>::operator()(_Iterator1, _Iterator2) [with _Iterator1 = __gnu_cxx::__normal_iterator >; _Iterator2 = __gnu_cxx::__normal_iterator >; _Compare = bool (*)(const ncbi::objects::CSeq_id_Handle&, ncbi::objects::CSeq_id_Handle)]': -/usr/include/c++/14/bits/predefined_ops.h:157:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 157 | operator()(_Iterator1 __it1, _Iterator2 __it2) - | ^~~~~~~~ -/usr/include/c++/14/bits/predefined_ops.h:157:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -Y_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o -/bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libseqmasks_io.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libseqmasks_io.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqmasks_io.so -/bin/ln -f .seqmasks_io.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqmasks_io.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -cd objtools/alnmgr/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/alnmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -In file included from /usr/include/c++/14/algorithm:61: -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, - | ^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1770 | __insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -In file included from /usr/include/c++/14/bits/stl_algo.h:61: -/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::objects::CSeq_id_Handle; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, - | ^~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_heap.h:340:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 340 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, - | ^~~~~~~~~~~ -/usr/include/c++/14/bits/stl_heap.h:340:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1876 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::__partial_sort(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1868:25, - inlined from 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1884:27: -/usr/include/c++/14/bits/stl_algo.h:1593:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1593 | std::__make_heap(__first, __middle, __comp); - | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from '_RandomAccessIterator std::__unguarded_partition_pivot(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1855:34, - inlined from 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1889:38: -/usr/include/c++/14/bits/stl_algo.h:90:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 90 | if (__comp(__b, __c)) - | ~~~~~~^~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:92:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 92 | else if (__comp(__a, __c)) - | ~~~~~~^~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:97:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 97 | else if (__comp(__a, __c)) - | ~~~~~~^~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:99:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 99 | else if (__comp(__b, __c)) - | ~~~~~~^~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bool (*)(const ncbi::objects::CSeq_id_Handle&, ncbi::objects::CSeq_id_Handle)]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, - inlined from 'void ncbi::objects::edit::CFeatTableEdit::GenerateLocusTags()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feattable_edit.cpp:1377:14: -/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1905 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1906 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1907 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bool (*)(const ncbi::objects::CSeq_id_Handle&, ncbi::objects::CSeq_id_Handle)]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, - inlined from 'void ncbi::objects::edit::CFeatTableEdit::GenerateLocusTags()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feattable_edit.cpp:1377:14: -/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1822 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(TSeqData&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:47: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] - 658 | string idstr = objects::sequence::GetTitle( bsh ); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:290:8: note: declared here - 290 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); - | ^~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' /usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o /usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o @@ -21411,65 +20837,41 @@ /usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o /usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o /bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -lm -lpthread +/usr/bin/g++ -std=gnu++17 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clashfactory.o dbindex_search.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -lm -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgoblastdbindex.so /bin/ln -f .xalgoblastdbindex.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgoblastdbindex.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp: In function 'ncbi::SIZE_TYPE ncbi::objects::edit::FindWithOptions(const std::string&, const std::string&, ncbi::SIZE_TYPE, bool, bool)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp:47:25: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] - 47 | pos = NStr::Find(str, pattern, pos, NPOS, NStr::eFirst, str_case); - | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/edit/parse_text_options.hpp:34, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp:33: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here - 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, - | ^~~~ -LE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gaps_edit.cpp -o gaps_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/source_edit.cpp -o source_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp -o rna_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/remote_updater.cpp -o remote_updater.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/eutils_updater.cpp -o eutils_updater.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp -o parse_text_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protecIn file included from /usr/include/c++/14/map:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/eutils/api/eutils.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/edit/eutils_updater.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/eutils_updater.cpp:35: -/usr/include/c++/14/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]': -/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/map:63: -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = ncbi::CConstRef; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'virtual ncbi::CRef ncbi::objects::edit::CEUtilsUpdaterWithCache::GetPubmedEntry(ncbi::TEntrezId, ncbi::objects::edit::EPubmedError*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/eutils_updater.cpp:591:25: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/bumake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o @@ -21481,12 +20883,7 @@ from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbicntr.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiobj.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiargs.hpp:84, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiapp_api.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_param.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp:33: + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader.cpp:34: /usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::objects::CSeq_id_Handle; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, @@ -21500,24 +20897,92 @@ 1770 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1812 | __final_insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1876 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::objects::{anonymous}::SBetterId]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, + inlined from 'virtual ncbi::objects::CDataLoader::TTSE_LockSet ncbi::objects::CPSGDataLoader::GetExternalAnnotRecordsNA(const ncbi::objects::CBioseq_Info&, const ncbi::objects::SAnnotSelector*, ncbi::objects::CDataLoader::TProcessedNAs*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader.cpp:294:9: +/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1905 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1906 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1907 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::objects::{anonymous}::SBetterId]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, + inlined from 'virtual ncbi::objects::CDataLoader::TTSE_LockSet ncbi::objects::CPSGDataLoader::GetExternalAnnotRecordsNA(const ncbi::objects::CBioseq_Info&, const ncbi::objects::SAnnotSelector*, ncbi::objects::CDataLoader::TProcessedNAs*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader.cpp:294:9: /usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1822 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ESegmentTrimFlag)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:1475:35: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CAlnMap::TNumrow' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 1475 | for (TNumrow row = 0; row < selected_rows.size(); row++) { + | ~~~~^~~~~~~~~~~~~~~~~~~~~~ +ild/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=6In file included from /usr/include/c++/14/vector:72, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:44, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/winmask/seq_masker_util.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_counts_converter.cpp:37: +/usr/include/c++/14/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/14/bits/vector.tcc:700:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 + 700 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/vector:66: +In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'void ncbi::CSeqMaskerOstat::SetMaxCount(Uint4)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:152:25, + inlined from 'int ncbi::CWinMaskCountsConverter::operator()()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_counts_converter.cpp:132:27: +/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1037 | _M_fill_insert(end(), __new_size - size(), __x); + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::objects::CAlnMap::TSegTypeFlags ncbi::objects::CAlnMap::x_SetRawSegType(TNumrow, TNumseg) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:152:45: warning: 'l_anchor_index' may be used uninitialized [-Wmaybe-uninitialized] + 152 | anchor_start = m_Starts[anchor_index]; + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:129:19: note: 'l_anchor_index' was declared here + 129 | TNumseg l_anchor_index, r_anchor_index, anchor_index; + | ^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp:130:39: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] + 130 | string id_str = sequence::GetTitle( bsh ); + | ~~~~~~~~~~~~~~~~~~^~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp:37: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:290:8: note: declared here + 290 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); + | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algo.h:61, from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbicntr.hpp:40, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiobj.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiargs.hpp:84, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiapp_api.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_param.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp:33: /usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::objects::CSeq_id_Handle; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, @@ -21531,34 +20996,30 @@ 1770 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1876 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::objects::{anonymous}::SBetterId]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, - inlined from 'virtual ncbi::objects::CDataLoader::TTSE_LockSet ncbi::objects::CPSGDataLoader::GetExternalAnnotRecordsNA(const ncbi::objects::CBioseq_Info&, const ncbi::objects::SAnnotSelector*, ncbi::objects::CDataLoader::TProcessedNAs*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader.cpp:294:9: -/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1905 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1906 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1907 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ncbi::objects::{anonymous}::SBetterId]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, - inlined from 'virtual ncbi::objects::CDataLoader::TTSE_LockSet ncbi::objects::CPSGDataLoader::GetExternalAnnotRecordsNA(const ncbi::objects::CBioseq_Info&, const ncbi::objects::SAnnotSelector*, ncbi::objects::CDataLoader::TProcessedNAs*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader.cpp:294:9: +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1812 | __final_insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1822 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/vector:72, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:36: +/usr/include/c++/14/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/14/bits/vector.tcc:700:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 + 700 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/vector:66: +In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'void ncbi::CSeqMaskerOstat::SetMaxCount(Uint4)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:152:25, + inlined from 'void ncbi::CWinMaskCountsGenerator::operator()()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:323:23: +/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1037 | _M_fill_insert(end(), __new_size - size(), __x); + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_stack.hpp:37, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:42, @@ -21581,10 +21042,6 @@ /usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 137 | { return std::__do_uninit_copy(__first, __last, __result); } | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ESegmentTrimFlag)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:1475:35: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CAlnMap::TNumrow' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 1475 | for (TNumrow row = 0; row < selected_rows.size(); row++) { - | ~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1876 | __introsort_loop(_RandomAccessIterator __first, @@ -21635,6 +21092,63 @@ /usr/include/c++/14/bits/stl_algo.h:1908:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1908 | std::__final_insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/map:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:34: +/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CSeq_id_Handle; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]': +/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/map:63: +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::shared_ptr; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'std::shared_ptr ncbi::objects::CPSGBioseqCache::Add(const ncbi::CPSG_BioseqInfo&, ncbi::objects::CSeq_id_Handle)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:217:22: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::shared_ptr; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'std::shared_ptr ncbi::objects::CPSGBioseqCache::Add(const ncbi::CPSG_BioseqInfo&, ncbi::objects::CSeq_id_Handle)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:220:18: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CSeq_id_Handle; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]': +/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +4 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_config.cpp -o win_mask_config.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o +/bin/rm -f libxalgowinmask.so .libxalgowinmask.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxalgowinmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqmasks_io -lxobjread -lxobjutil -lxobjmgr -lseq -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxalgowinmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgowinmask.so +/bin/ln -f .xalgowinmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgowinmask.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function 'static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef&, const ncbi::CRef&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:76:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 76 | match1->m_ChainScore == match2->m_ChainScore && @@ -21657,101 +21171,250 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 199 | strand2 != eNa_strand_minus)) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::objects::CAlnMap::TSegTypeFlags ncbi::objects::CAlnMap::x_SetRawSegType(TNumrow, TNumseg) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:152:45: warning: 'l_anchor_index' may be used uninitialized [-Wmaybe-uninitialized] - 152 | anchor_start = m_Starts[anchor_index]; - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:129:19: note: 'l_anchor_index' was declared here - 129 | TNumseg l_anchor_index, r_anchor_index, anchor_index; - | ^~~~~~~~~~~~~~ -tor-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/publication_edit.cpp -o publication_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gap_trim.cpp -o gap_trim.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/external_annots.cpp -o external_annots.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feature_propagate.cpp -o feature_propagate.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_object_description.cpp -o text_object_description.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_edit.cpp -o seq_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ff/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_object_description.cpp:336:15: warning: 'std::string ncbi::objects::edit::GetTextObjectDescription(const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, const std::string&)' defined but not used [-Wunused-function] - 336 | static string GetTextObjectDescription(const CSeq_feat& seq_feat, CScope& scope, const string& product) - | ^~~~~~~~~~~~~~~~~~~~~~~~ --path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alndiag.cpp -o alndiag.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp -o alnmatch.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()': +In file included from /usr/include/c++/14/memory:69, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_stack.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:42: +/usr/include/c++/14/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*]': +/usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; bool _TrivialValueTypes = false]', + inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, + inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; _Tp = ncbi::objects::CSeq_id_Handle]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, + inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = ncbi::objects::CSeq_id_Handle; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:606:31, + inlined from 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = vector; _Args = {const vector >&}]' at /usr/include/c++/14/bits/stl_construct.h:119:7, + inlined from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator*, vector > >; _ForwardIterator = vector*]' at /usr/include/c++/14/bits/stl_uninitialized.h:120:21, + inlined from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _ForwardIterator = std::vector*; bool _TrivialValueTypes = false]' at /usr/include/c++/14/bits/stl_uninitialized.h:137:32, + inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator*, vector > >; _ForwardIterator = vector*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, + inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator*, vector > >; _ForwardIterator = vector*; _Tp = vector]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, + inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = std::vector; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/stl_vector.h:606:31, + inlined from 'constexpr std::_Head_base<_Idx, _Head, false>::_Head_base(const _Head&) [with unsigned int _Idx = 2; _Head = std::vector >]' at /usr/include/c++/14/tuple:202:9, + inlined from 'constexpr std::_Tuple_impl<_Idx, _Head, _Tail ...>::_Tuple_impl(_UHead&&, _UTail&& ...) [with _UHead = const std::vector >&; _UTail = {std::reference_wrapper > >, std::reference_wrapper > >}; = void; unsigned int _Idx = 2; _Head = std::vector >; _Tail = {std::reference_wrapper > >, std::reference_wrapper > >}]' at /usr/include/c++/14/tuple:317:38, + inlined from 'constexpr std::_Tuple_impl<_Idx, _Head, _Tail ...>::_Tuple_impl(_UHead&&, _UTail&& ...) [with _UHead = ncbi::objects::CDataSource*&; _UTail = {const std::vector >, std::allocator > > >&, std::reference_wrapper > >, std::reference_wrapper > >}; = void; unsigned int _Idx = 1; _Head = ncbi::objects::CDataSource*; _Tail = {std::vector >, std::allocator > > >, std::reference_wrapper > >, std::reference_wrapper > >}]' at /usr/include/c++/14/tuple:317:38, + inlined from 'constexpr std::_Tuple_impl<_Idx, _Head, _Tail ...>::_Tuple_impl(_UHead&&, _UTail&& ...) [with _UHead = ncbi::objects::CPSGDataLoader_Impl*; _UTail = {ncbi::objects::CDataSource*&, const std::vector >, std::allocator > > >&, std::reference_wrapper > >, std::reference_wrapper > >}; = void; unsigned int _Idx = 0; _Head = ncbi::objects::CPSGDataLoader_Impl*; _Tail = {ncbi::objects::CDataSource*, std::vector >, std::allocator > > >, std::reference_wrapper > >, std::reference_wrapper > >}]' at /usr/include/c++/14/tuple:317:38, + inlined from 'constexpr std::tuple< >::tuple(_UElements&& ...) [with _UElements = {ncbi::objects::CPSGDataLoader_Impl*, ncbi::objects::CDataSource*&, const std::vector >, std::allocator > > >&, std::reference_wrapper > >, std::reference_wrapper > >}; bool _Valid = true; typename std::enable_if<_TCC<_Valid>::__is_implicitly_constructible<_UElements ...>(), bool>::type = true; _Elements = {ncbi::objects::CPSGDataLoader_Impl*, ncbi::objects::CDataSource*, std::vector >, std::allocator > > >, std::reference_wrapper > >, std::reference_wrapper > >}]' at /usr/include/c++/14/tuple:1489:54, + inlined from 'std::_Bind<_Functor(_Bound_args ...)>::_Bind(_Functor&&, _Args&& ...) [with _Args = {ncbi::objects::CPSGDataLoader_Impl*, ncbi::objects::CDataSource*&, const std::vector >, std::allocator > > >&, std::reference_wrapper > >, std::reference_wrapper > >}; _Functor = void (ncbi::objects::CPSGDataLoader_Impl::*)(ncbi::objects::CDataSource*, const std::vector >&, std::vector&, std::vector&); _Bound_args = {ncbi::objects::CPSGDataLoader_Impl*, ncbi::objects::CDataSource*, std::vector >, std::allocator > > >, std::reference_wrapper > >, std::reference_wrapper > >}]' at /usr/include/c++/14/functional:585:26, + inlined from 'typename std::_Bind_helper::value, _Func, _BoundArgs ...>::type std::bind(_Func&&, _BoundArgs&& ...) [with _Func = void (ncbi::objects::CPSGDataLoader_Impl::*)(ncbi::objects::CDataSource*, const vector >&, vector&, vector&); _BoundArgs = {ncbi::objects::CPSGDataLoader_Impl*, ncbi::objects::CDataSource*&, const vector >, allocator > > >&, reference_wrapper > >, reference_wrapper > >}]' at /usr/include/c++/14/functional:892:43, + inlined from 'void ncbi::objects::CPSGDataLoader_Impl::GetCDDAnnots(ncbi::objects::CDataSource*, const TSeqIdSets&, TLoaded&, TCDD_Locks&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:2307:23: +/usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 137 | { return std::__do_uninit_copy(__first, __last, __result); } + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; bool _TrivialValueTypes = false]', + inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, + inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; _Tp = ncbi::objects::CSeq_id_Handle]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, + inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = ncbi::objects::CSeq_id_Handle; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:606:31, + inlined from 'ncbi::objects::SPsgAnnotInfo::SPsgAnnotInfo(const std::string&, const TIds&, const TInfos&, int)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:283:20: +/usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 137 | { return std::__do_uninit_copy(__first, __last, __result); } + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:691:40: warning: 'second_row_fits' may be used uninitialized [-Wmaybe-uninitialized] 691 | second_row_fits != eIgnoreMatch) { | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:155:20: note: 'second_row_fits' was declared here 155 | TSecondRowFits second_row_fits; | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 311 | if (plus && prev_start_plus_len < start || - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -ile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/pub_fix.cpp -o pub_fix.o -/bin/rm -f libxobjedit.so .libxobjedit.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxobjedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_utils.o seq_entry_edit.o promote.o autodef_with_tax.o field_handler.o apply_object.o string_constraint.o seqid_guesser.o dblink_field.o struc_comm_field.o text_desc_field.o gb_block_field.o link_cds_mrna.o cds_fix.o loc_edit.o mail_report.o feattable_edit.o gaps_edit.o source_edit.o rna_edit.o remote_updater.o eutils_updater.o parse_text_options.o publication_edit.o gap_trim.o external_annots.o feature_propagate.o text_object_description.o seq_edit.o pub_fix.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjutil -ltaxon3 -lvalid -lxlogging -leutils -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxobjedit.so -/bin/ln -f .xobjedit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjedit.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:49:74: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 49 | CSeqFormatterConfig config /* = CSeqFormatterConfig() */) + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:270:72: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 270 | void CSeqFormatter::DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config) + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alndiag.cpp -o alndiag.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp -o alnmatch.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::set; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'void ncbi::objects::CPSGDataLoader_Impl::GetBlobsOnce(ncbi::objects::CDataSource*, TLoadedSeqIds&, TTSE_LockSets&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:2275:32: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::set; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'void ncbi::objects::CPSGDataLoader_Impl::GetBlobsOnce(ncbi::objects::CDataSource*, TLoadedSeqIds&, TTSE_LockSets&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:2293:31: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/map:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:34: -/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CSeq_id_Handle; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]': -/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/invalid_data_exception.hpp:31, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:34: +/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]': +/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; bool _TrivialValueTypes = false]', + inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, + inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; _Tp = ncbi::objects::CSeq_id_Handle]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, + inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = ncbi::objects::CSeq_id_Handle; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:606:31, + inlined from 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = std::vector; _Args = {const std::vector >&}; _Tp = std::_List_node >]' at /usr/include/c++/14/bits/new_allocator.h:191:4, + inlined from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = std::vector; _Args = {const std::vector >&}; _Tp = std::_List_node >]' at /usr/include/c++/14/bits/alloc_traits.h:569:17, + inlined from 'std::__cxx11::list<_Tp, _Alloc>::_Node* std::__cxx11::list<_Tp, _Alloc>::_M_create_node(_Args&& ...) [with _Args = {const std::vector >&}; _Tp = std::vector; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/stl_list.h:713:33, + inlined from 'void std::__cxx11::list<_Tp, _Alloc>::_M_insert(iterator, _Args&& ...) [with _Args = {const std::vector >&}; _Tp = std::vector; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/stl_list.h:2004:32, + inlined from 'void std::__cxx11::list<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::vector; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/stl_list.h:1306:24, + inlined from 'void ncbi::objects::CPSG_PrefetchCDD_Task::AddRequest(const ncbi::objects::CDataLoader::TIds&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:911:24, + inlined from 'ncbi::objects::CDataLoader::TTSE_LockSet ncbi::objects::CPSGDataLoader_Impl::GetRecordsOnce(ncbi::objects::CDataSource*, const ncbi::objects::CSeq_id_Handle&, ncbi::objects::CDataLoader::EChoice)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:1550:50: +/usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 137 | { return std::__do_uninit_copy(__first, __last, __result); } + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/map:63: -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::shared_ptr; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'std::shared_ptr ncbi::objects::CPSGBioseqCache::Add(const ncbi::CPSG_BioseqInfo&, ncbi::objects::CSeq_id_Handle)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:217:22: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'void ncbi::CBlastDBExtractor::x_SetGi2AccMap()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:267:22: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 | std::tuple(__k), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::shared_ptr; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'std::shared_ptr ncbi::objects::CPSGBioseqCache::Add(const ncbi::CPSG_BioseqInfo&, ncbi::objects::CSeq_id_Handle)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:220:18: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'std::string ncbi::CBlastDBExtractor::ExtractAccession()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:332:36: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 | std::tuple(__k), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CSeq_id_Handle; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]': -/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'void ncbi::CBlastDBExtractor::x_SetGi2SeqIdMap()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:292:25: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'void ncbi::CBlastDBExtractor::x_SetGi2SeqIdMap()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:295:25: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'std::string ncbi::CBlastDBExtractor::ExtractSeqId()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:348:41: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'void ncbi::CBlastDBExtractor::x_SetGi2TitleMap()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:320:24: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::__cxx11::basic_string; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'std::string ncbi::CBlastDBExtractor::ExtractTitle()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:375:41: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]': +/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LIn file included from /usr/include/c++/14/map:62, +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = int; _Compare = std::less; _Alloc = std::allocator >]', + inlined from 'ncbi::TTaxId ncbi::CBlastDBExtractor::x_ExtractTaxId()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:752:41: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; bool _TrivialValueTypes = false]', + inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, + inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; _Tp = ncbi::objects::CSeq_id_Handle]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, + inlined from 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::objects::CSeq_id_Handle; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:1624:35, + inlined from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = ncbi::objects::CSeq_id_Handle; _Alloc = std::allocator]' at /usr/include/c++/14/bits/vector.tcc:238:44, + inlined from 'virtual ncbi::CThreadPool_Task::EStatus ncbi::objects::CPSG_PrefetchCDD_Task::Execute()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:938:31: +/usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 137 | { return std::__do_uninit_copy(__first, __last, __result); } + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp -o blastdb_formatter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o +/bin/rm -f libblastdb_format.so .libblastdb_format.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libblastdb_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lxobjmgr -lseq -lxser -lsequtil -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libblastdb_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblastdb_format.so +/bin/ln -f .blastdb_format.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastdb_format.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 311 | if (plus && prev_start_plus_len < start || + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/map:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, @@ -21794,44 +21457,13 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/memory:69, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_stack.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:42: -/usr/include/c++/14/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*]': -/usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; bool _TrivialValueTypes = false]', - inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, - inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; _Tp = ncbi::objects::CSeq_id_Handle]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, - inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = ncbi::objects::CSeq_id_Handle; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:606:31, - inlined from 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = vector; _Args = {const vector >&}]' at /usr/include/c++/14/bits/stl_construct.h:119:7, - inlined from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator*, vector > >; _ForwardIterator = vector*]' at /usr/include/c++/14/bits/stl_uninitialized.h:120:21, - inlined from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _ForwardIterator = std::vector*; bool _TrivialValueTypes = false]' at /usr/include/c++/14/bits/stl_uninitialized.h:137:32, - inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator*, vector > >; _ForwardIterator = vector*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, - inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator*, vector > >; _ForwardIterator = vector*; _Tp = vector]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, - inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = std::vector; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/stl_vector.h:606:31, - inlined from 'constexpr std::_Head_base<_Idx, _Head, false>::_Head_base(const _Head&) [with unsigned int _Idx = 2; _Head = std::vector >]' at /usr/include/c++/14/tuple:202:9, - inlined from 'constexpr std::_Tuple_impl<_Idx, _Head, _Tail ...>::_Tuple_impl(_UHead&&, _UTail&& ...) [with _UHead = const std::vector >&; _UTail = {std::reference_wrapper > >, std::reference_wrapper > >}; = void; unsigned int _Idx = 2; _Head = std::vector >; _Tail = {std::reference_wrapper > >, std::reference_wrapper > >}]' at /usr/include/c++/14/tuple:317:38, - inlined from 'constexpr std::_Tuple_impl<_Idx, _Head, _Tail ...>::_Tuple_impl(_UHead&&, _UTail&& ...) [with _UHead = ncbi::objects::CDataSource*&; _UTail = {const std::vector >, std::allocator > > >&, std::reference_wrapper > >, std::reference_wrapper > >}; = void; unsigned int _Idx = 1; _Head = ncbi::objects::CDataSource*; _Tail = {std::vector >, std::allocator > > >, std::reference_wrapper > >, std::reference_wrapper > >}]' at /usr/include/c++/14/tuple:317:38, - inlined from 'constexpr std::_Tuple_impl<_Idx, _Head, _Tail ...>::_Tuple_impl(_UHead&&, _UTail&& ...) [with _UHead = ncbi::objects::CPSGDataLoader_Impl*; _UTail = {ncbi::objects::CDataSource*&, const std::vector >, std::allocator > > >&, std::reference_wrapper > >, std::reference_wrapper > >}; = void; unsigned int _Idx = 0; _Head = ncbi::objects::CPSGDataLoader_Impl*; _Tail = {ncbi::objects::CDataSource*, std::vector >, std::allocator > > >, std::reference_wrapper > >, std::reference_wrapper > >}]' at /usr/include/c++/14/tuple:317:38, - inlined from 'constexpr std::tuple< >::tuple(_UElements&& ...) [with _UElements = {ncbi::objects::CPSGDataLoader_Impl*, ncbi::objects::CDataSource*&, const std::vector >, std::allocator > > >&, std::reference_wrapper > >, std::reference_wrapper > >}; bool _Valid = true; typename std::enable_if<_TCC<_Valid>::__is_implicitly_constructible<_UElements ...>(), bool>::type = true; _Elements = {ncbi::objects::CPSGDataLoader_Impl*, ncbi::objects::CDataSource*, std::vector >, std::allocator > > >, std::reference_wrapper > >, std::reference_wrapper > >}]' at /usr/include/c++/14/tuple:1489:54, - inlined from 'std::_Bind<_Functor(_Bound_args ...)>::_Bind(_Functor&&, _Args&& ...) [with _Args = {ncbi::objects::CPSGDataLoader_Impl*, ncbi::objects::CDataSource*&, const std::vector >, std::allocator > > >&, std::reference_wrapper > >, std::reference_wrapper > >}; _Functor = void (ncbi::objects::CPSGDataLoader_Impl::*)(ncbi::objects::CDataSource*, const std::vector >&, std::vector&, std::vector&); _Bound_args = {ncbi::objects::CPSGDataLoader_Impl*, ncbi::objects::CDataSource*, std::vector >, std::allocator > > >, std::reference_wrapper > >, std::reference_wrapper > >}]' at /usr/include/c++/14/functional:585:26, - inlined from 'typename std::_Bind_helper::value, _Func, _BoundArgs ...>::type std::bind(_Func&&, _BoundArgs&& ...) [with _Func = void (ncbi::objects::CPSGDataLoader_Impl::*)(ncbi::objects::CDataSource*, const vector >&, vector&, vector&); _BoundArgs = {ncbi::objects::CPSGDataLoader_Impl*, ncbi::objects::CDataSource*&, const vector >, allocator > > >&, reference_wrapper > >, reference_wrapper > >}]' at /usr/include/c++/14/functional:892:43, - inlined from 'void ncbi::objects::CPSGDataLoader_Impl::GetCDDAnnots(ncbi::objects::CDataSource*, const TSeqIdSets&, TLoaded&, TCDD_Locks&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:2307:23: -/usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 137 | { return std::__do_uninit_copy(__first, __last, __result); } - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; bool _TrivialValueTypes = false]', - inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, - inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; _Tp = ncbi::objects::CSeq_id_Handle]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, - inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = ncbi::objects::CSeq_id_Handle; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:606:31, - inlined from 'ncbi::objects::SPsgAnnotInfo::SPsgAnnotInfo(const std::string&, const TIds&, const TInfos&, int)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:283:20: -/usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 137 | { return std::__do_uninit_copy(__first, __last, __result); } - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = ncbi::objects::CCachedSeqDataForRemote; _Compare = std::less; _Alloc = std::allocator >]', +D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LIn member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = ncbi::objects::CCachedSeqDataForRemote; _Compare = std::less; _Alloc = std::allocator >]', inlined from 'virtual ncbi::CRef ncbi::objects::CRemoteBlastDbAdapter::GetSequence(int, int, int)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp:198:58: /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, @@ -21840,10 +21472,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, EAlgorithm)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 136 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = ncbi::objects::CCachedSeqDataForRemote; _Compare = std::less; _Alloc = std::allocator >]', inlined from 'virtual ncbi::objects::IBlastDbAdapter::TSeqIdList ncbi::objects::CRemoteBlastDbAdapter::GetSeqIDs(int)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp:74:23: /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 @@ -21853,10 +21481,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, EAlgorithm)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 300 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = ncbi::objects::CCachedSeqDataForRemote; _Compare = std::less; _Alloc = std::allocator >]', inlined from 'void ncbi::objects::CRemoteBlastDbAdapter::x_FetchDataByBatch(const std::vector&, const std::vector >&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp:157:66: /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 @@ -21911,42 +21535,43 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::set; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'void ncbi::objects::CPSGDataLoader_Impl::GetBlobsOnce(ncbi::objects::CDataSource*, TLoadedSeqIds&, TTSE_LockSets&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:2275:32: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CSeq_id_Handle; _Tp = std::set; _Compare = std::less; _Alloc = std::allocator > >]', - inlined from 'void ncbi::objects::CPSGDataLoader_Impl::GetBlobsOnce(ncbi::objects::CDataSource*, TLoadedSeqIds&, TTSE_LockSets&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:2293:31: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; bool _TrivialValueTypes = false]', - inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, - inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; _Tp = ncbi::objects::CSeq_id_Handle]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, - inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = ncbi::objects::CSeq_id_Handle; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:606:31, - inlined from 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = std::vector; _Args = {const std::vector >&}; _Tp = std::_List_node >]' at /usr/include/c++/14/bits/new_allocator.h:191:4, - inlined from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = std::vector; _Args = {const std::vector >&}; _Tp = std::_List_node >]' at /usr/include/c++/14/bits/alloc_traits.h:569:17, - inlined from 'std::__cxx11::list<_Tp, _Alloc>::_Node* std::__cxx11::list<_Tp, _Alloc>::_M_create_node(_Args&& ...) [with _Args = {const std::vector >&}; _Tp = std::vector; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/stl_list.h:713:33, - inlined from 'void std::__cxx11::list<_Tp, _Alloc>::_M_insert(iterator, _Args&& ...) [with _Args = {const std::vector >&}; _Tp = std::vector; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/stl_list.h:2004:32, - inlined from 'void std::__cxx11::list<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::vector; _Alloc = std::allocator >]' at /usr/include/c++/14/bits/stl_list.h:1306:24, - inlined from 'void ncbi::objects::CPSG_PrefetchCDD_Task::AddRequest(const ncbi::objects::CDataLoader::TIds&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:911:24, - inlined from 'ncbi::objects::CDataLoader::TTSE_LockSet ncbi::objects::CPSGDataLoader_Impl::GetRecordsOnce(ncbi::objects::CDataSource*, const ncbi::objects::CSeq_id_Handle&, ncbi::objects::CDataLoader::EChoice)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:1550:50: -/usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 137 | { return std::__do_uninit_copy(__first, __last, __result); } - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::string&, const ncbi::IAlnExplorer::TSignedRange&, bool) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: 'ncbi::COpenRange::position_type' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 702 | if (translate && aln_range.GetLength() >= trim_from + trim_to) { - | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp -o gbnative.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader.cpp -o psg_loader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp -o psg_loader_impl.o +/bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp +/bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp +ar cr libncbi_xloader_genbank.a gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopen/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, EAlgorithm)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 136 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, EAlgorithm)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 300 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +mp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lpsg_client -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnserv -lxcompress -lxser -lxthrserv -lxxconnect2 -lsequtil -lxconnect -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread ) +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_genbank.a +/bin/ln -f .ncbi_xloader_genbank-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_genbank-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xloader_genbank.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_genbank.so +/bin/ln -f .ncbi_xloader_genbank.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_genbank.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o @@ -21957,26 +21582,21 @@ /bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -cd objtools/cleanup/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; bool _TrivialValueTypes = false]', - inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, - inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::objects::CSeq_id_Handle*; _Tp = ncbi::objects::CSeq_id_Handle]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, - inlined from 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::objects::CSeq_id_Handle; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:1624:35, - inlined from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = ncbi::objects::CSeq_id_Handle; _Alloc = std::allocator]' at /usr/include/c++/14/bits/vector.tcc:238:44, - inlined from 'virtual ncbi::CThreadPool_Task::EStatus ncbi::objects::CPSG_PrefetchCDD_Task::Execute()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp:938:31: -/usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 137 | { return std::__do_uninit_copy(__first, __last, __result); } - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +cd objtools/simple/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::string&, const ncbi::IAlnExplorer::TSignedRange&, bool) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: 'ncbi::COpenRange::position_type' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 702 | if (translate && aln_range.GetLength() >= trim_from + trim_to) { + | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/alnmgr/sparse_aln.hpp:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:34: In member function 'ncbi::CAlignRangeCollExtender::position_type ncbi::CAlignRangeCollExtender::GetSecondFrom() const [with TColl = ncbi::CAlignRangeCollectionList >]', @@ -21999,101 +21619,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:228:46: note: 'ext' declared here 228 | CAlignRangeCollExtender ext(*m_Aln->GetPairwiseAlns()[row]); | ^~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp -o gbnative.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader.cpp -o psg_loader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp -o psg_loader_impl.o -/bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp -/bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp -ar cr libncbi_xloader_genbank.a gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lpsg_client -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnserv -lxcompress -lxser -lxthrserv -lxxconnect2 -lsequtil -lxconnect -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread ) -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_genbank.a -/bin/ln -f .ncbi_xloader_genbank-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_genbank-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xloader_genbank.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_genbank.so -/bin/ln -f .ncbi_xloader_genbank.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_genbank.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::x_HasShortIntron(const ncbi::objects::CSeq_loc&, size_t)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp:2875:68: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 2875 | if (abs((long int)this_start - (long int)prev_end) < min_len) { - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ -ARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_ci.cpp -o sparse_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alntext.cpp -o alntext.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/score_builder_base.cpp -o score_builder_base.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_container.cpp -o aln_container.o -/bin/rm -f libxalnmgr.so .libxalnmgr.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxalnmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o aln_container.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjutil -lxobjmgr -lseqset -lseq -lxser -ltables -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxalnmgr.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalnmgr.so -/bin/ln -f .xalnmgr.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalnmgr.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -cd objtools/simple/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp -o autogenerated_extended_cleanup.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp -o cleanup.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_utils.cpp -o cleanup_utils.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/gene_qual_normalization.cpp -o gene_qual_normalization.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o mkindex_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makembindex -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makembindex -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=seqdb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp: In static member function 'static bool ncbi::objects::CCleanup::s_AddNumToUserField(ncbi::objects::CUser_field&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:398:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] - 398 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetStrs().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:404:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 404 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetInts().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:410:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 410 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetReals().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:416:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector*>::size_type' {aka 'unsigned int'} [-Wsign-compare] - 416 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetOss().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple/simple_om.cpp -o simple_om.o /bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp @@ -22103,35 +21628,60 @@ /bin/ln -f .xobjsimple.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjsimple.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=seqdb_tax4blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o mkindex_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makembindex +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makembindex +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_tax4blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp -o seqdb_lmdb_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_lmdb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_lmdb_unit_test +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +ARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_ci.cpp -o sparse_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alntext.cpp -o alntext.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/score_builder_base.cpp -o score_builder_base.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_container.cpp -o aln_container.o +/bin/rm -f libxalnmgr.so .libxalnmgr.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxalnmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o aln_container.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjutil -lxobjmgr -lseqset -lseq -lxser -ltables -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxalnmgr.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalnmgr.so +/bin/ln -f .xalnmgr.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalnmgr.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_tax4blast_unit_test.cpp -o seqdb_tax4blast_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_tax4blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lsqlitewrapp -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_tax4blast_unit_test @@ -22139,24 +21689,36 @@ /bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_tax4blast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -cd app/dustmasker/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/dustmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. - -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp -o cleanup_user_object.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_author.cpp -o cleanup_author.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_pub.cpp -o cleanup_pub.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp -o capitalization_string.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/fix_feature_id.cpp -o fix_feature_id.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-secumake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp -o seqdb_lmdb_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_lmdb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_lmdb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +cd app/winmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker/main.cpp -o main.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o dust_mask_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgodustmask -lseqmasks_io -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lseqdb -lblastdb -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o dustmasker @@ -22164,17 +21726,37 @@ /bin/ln -f dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/dustmasker make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=writedb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/main.cpp -o main.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgowinmask -lxalgodustmask -lblast -lcomposition_adjustment -lseqmasks_io -lseqdb -lblastdb -ltables -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o windowmasker +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/windowmasker +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /usr/include/c++/14/bits/stl_algo.h:61, from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, @@ -22215,6 +21797,188 @@ 1770 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestNoFormatSpecifier::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:54:41: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 54 | BOOST_REQUIRE_THROW(CSeqFormatter f(format_spec, db, std::cout), + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/test_boost.hpp:123:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL_EX' + 123 | S; \ + | ^ +/usr/include/boost/test/tools/old/interface.hpp:120:45: note: in expansion of macro 'BOOST_CHECK_THROW_IMPL' + 120 | #define BOOST_REQUIRE_THROW( S, E ) BOOST_CHECK_THROW_IMPL( S, E, true, "", REQUIRE ) + | ^~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_Empty::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:122:57: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 122 | #define NcbiEmptyString NCBI_NS_NCBI::CNcbiEmptyString::Get() + | ^~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/test_boost.hpp:123:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL_EX' + 123 | S; \ + | ^ +/usr/include/boost/test/tools/old/interface.hpp:120:45: note: in expansion of macro 'BOOST_CHECK_THROW_IMPL' + 120 | #define BOOST_REQUIRE_THROW( S, E ) BOOST_CHECK_THROW_IMPL( S, E, true, "", REQUIRE ) + | ^~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:123:19: note: in expansion of macro 'NcbiEmptyString' + 123 | #define kEmptyStr NcbiEmptyString + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:61:41: note: in expansion of macro 'kEmptyStr' + 61 | BOOST_REQUIRE_THROW(CSeqFormatter f(kEmptyStr, db, std::cout), + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_InvalidAlgoId::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:68:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 68 | CSeqFormatterConfig config; + | ^~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:70:40: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 70 | BOOST_REQUIRE_THROW(CSeqFormatter f("%m", db, std::cout, config), + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/test_boost.hpp:123:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL_EX' + 123 | S; \ + | ^ +/usr/include/boost/test/tools/old/interface.hpp:120:45: note: in expansion of macro 'BOOST_CHECK_THROW_IMPL' + 120 | #define BOOST_REQUIRE_THROW( S, E ) BOOST_CHECK_THROW_IMPL( S, E, true, "", REQUIRE ) + | ^~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestValidFormatSpecifiers::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:77:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 77 | CSeqFormatterConfig config; + | ^~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:93:24: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 93 | CSeqFormatter f(*itr, db, std::cout, config); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:97:20: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 97 | CSeqFormatter f("%m", db, std::cout, config); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiOidLength::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:108:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 108 | CSeqFormatter f(format_spec, db, out); + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqId::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:150:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 150 | CSeqFormatter f(format_spec, db, out); + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqIdLong::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:191:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 191 | CSeqFormatter f(format_spec, db, out); + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestAccessionPIGTaxidTitle::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:223:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 223 | CSeqFormatter f(format_spec, db, out); + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiGivenPIG::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:254:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 254 | CSeqFormatter f(format_spec, db, out); + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSequenceDataLength::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:279:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 279 | CSeqFormatter f(format_spec, db, out); + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedFasta::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:309:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 309 | CSeqFormatterConfig config; + | ^~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:314:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 314 | CSeqFormatter f(format_spec, db, out, config); + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedSequenceData::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:353:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 353 | CSeqFormatterConfig config; + | ^~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:356:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 356 | CSeqFormatter f(format_spec, db, out, config); + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o gene_info_reader +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_reader +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /usr/include/c++/14/map:63: /usr/include/c++/14/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = std::set; _Compare = std::less; _Alloc = std::allocator > >]': /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 @@ -22224,24 +21988,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp -o writedb_lmdb_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie writedb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o writedb_lmdb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/writedb_lmdb_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. /usr/include/c++/14/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]': /usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: @@ -22286,6 +22032,24 @@ /usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1822 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_demo +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_demo +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tax4blast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, inlined from 'void seqdb::TwoGiListsOneVolume::test_method()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:1726:9: @@ -22326,6 +22090,112 @@ /usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1822 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp -o seq_formatter_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seq_writer_unit_test.o seq_formatter_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastdb_format -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o blastdb_format_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_format_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/tax4blast.cpp -o tax4blast.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tax4blast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lsqlitewrapp -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lsqlite3 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tax4blast +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tax4blast +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=writedb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'void CSeqDBPerfApp::x_UpdateMemoryUsage(int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:114:23: warning: 'bool ncbi::GetMemoryUsage(size_t*, size_t*, size_t*)' is deprecated [-Wdeprecated-declarations] + 114 | if (GetMemoryUsage(&mu.total, &mu.resident, &mu.shared)) { + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:511:13: note: declared here + 511 | extern bool GetMemoryUsage(size_t* total, size_t* resident, size_t* shared); + | ^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'int CSeqDBPerfApp::x_ScanDatabase()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:154:31: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 154 | for (ssize_t i = 0; i < oids2iterate.size(); i++) { + | ~~^~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_perf +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_perf +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp -o writedb_lmdb_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie writedb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o writedb_lmdb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/writedb_lmdb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +cd algo/blast/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api TMPL=xblast -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch__.cpp -o efetch__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch___.cpp -o efetch___.o +/bin/rm -f libefetch.so .libefetch.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libefetch.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC efetch__.o efetch___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libefetch.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libefetch.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libefetch.so +/bin/ln -f .efetch.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.efetch.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +cd objtools/align_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = int; _Compare = std::less; _Alloc = std::allocator >]', inlined from 'void seqdb::GetTaxIDs_gi_to_taxid::test_method()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:1760:5: /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 @@ -22425,193 +22295,86 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -rity -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_message.cpp -o cleanup_message.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/influenza_set.cpp -o influenza_set.o -/bin/rm -f libxcleanup.so .libxcleanup.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxcleanup.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o gene_qual_normalization.o cleanup_user_object.o cleanup_author.o cleanup_pub.o newcleanupp.o capitalization_string.o fix_feature_id.o cleanup_message.o influenza_set.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxobjutil -lvalid -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre2-8 -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcleanup.so -/bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcleanup.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -cd algo/winmask/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_score_mean.cpp -o seq_masker_score_mean.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp: In member function 'double ncbi::CSeqMasker::MergeAvg(std::__cxx11::list::iterator, const std::__cxx11::list::iterator&, Uint4) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:412:8: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 - 412 | double CSeqMasker::MergeAvg( TMList::iterator mi, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp: In member function 'void ncbi::CSeqMasker::Merge(TMList&, std::__cxx11::list::iterator, TMList&, std::__cxx11::list::iterator&) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:426:6: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 - 426 | void CSeqMasker::Merge( TMList & m, TMList::iterator mi, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp: In member function 'ncbi::CSeqMasker::TMaskList* ncbi::CSeqMasker::DoMask(const ncbi::objects::CSeqVector&, ncbi::TSeqPos, ncbi::TSeqPos) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:313:32: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 - 313 | lavg = MergeAvg( k, tmp, unit_size ); - | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:319:32: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 - 319 | ravg = MergeAvg( ii, j, unit_size ); - | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:336:42: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 - 336 | k->avg = MergeAvg( k, --j, unit_size ); - | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:362:34: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 - 362 | k->avg = MergeAvg( k, --j, unit_size ); - | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp:394:34: note: parameter passing for argument of type 'std::__cxx11::list::iterator' changed in GCC 7.1 - 394 | k->avg = MergeAvg( k, j, unit_size ); - | ~~~~~~~~^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -cd objtools/align_format/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/align_format_util.cpp: In static member function 'static void ncbi::align_format::CAlignFormatUtil::AddSpace(ncbi::CNcbiOstream&, size_t)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/align_format_util.cpp: In static member function 'static void ncbi::align_format::CAlignFormatUtil::AddSpace(ncbi::CNcbiOstream&, size_t)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/align_format_util.cpp:810:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 810 | for(auto i=0; i::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/14/bits/vector.tcc:700:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 - 700 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:100:35: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] + 100 | return m_Opts->GetFilterString(); /* NCBI_FAKE_WARNING */ + | ~~~~~~~~~~~~~~~~~~~~~~~^~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here + 178 | NCBI_DEPRECATED char* GetFilterString() const; + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'void ncbi::blast::CBlastOptionsHandle::SetFilterString(const char*, bool)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:106:28: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] + 106 | m_Opts->SetFilterString(f, clear); /* NCBI_FAKE_WARNING */ + | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here + 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); + | ^~~~~~~~~~~~~~~ +E_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_seqalign.cpp -o blast_seqalign.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp -o blast_options_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_nucl_options.cpp -o blast_nucl_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/disc_nucl_options.cpp -o disc_nucl_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_prot_options.cpp -o blast_prot_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_options.cpp -o psiblast_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_rps_options.cpp -o blast_rps_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blastx_options.cpp -o blastx_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/tblastx_options.cpp -o tblastx_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/tblastn_options.cpp -o tblastn_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/rpstblastn_options.cpp -o rpstblastn_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducibmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/format_flags.cpp -o format_flags.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/align_format_util.cpp -o align_format_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/showdefline.cpp -o showdefline.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/showalign.cpp -o showalign.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/tabular.cpp -o tabular.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SIn file included from /usr/include/c++/14/vector:66: -In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'void ncbi::CSeqMaskerOstat::SetMaxCount(Uint4)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:152:25, - inlined from 'int ncbi::CWinMaskCountsConverter::operator()()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_counts_converter.cpp:132:27: -/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1037 | _M_fill_insert(end(), __new_size - size(), __x); - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -ild/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=6/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp: In function 'const std::string& ncbi::objects::s_AaName(int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp:2135:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare] - 2135 | if ( idx > 0 && idx < ArraySize(s_TrnaList) ) { - | ~~~~^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/vector:72, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:36: -/usr/include/c++/14/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/14/bits/vector.tcc:700:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 - 700 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/vector:66: -In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'void ncbi::CSeqMaskerOstat::SetMaxCount(Uint4)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:152:25, - inlined from 'void ncbi::CWinMaskCountsGenerator::operator()()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:323:23: -/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1037 | _M_fill_insert(end(), __new_size - size(), __x); - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp: In member function 'void ncbi::align_format::CVecscreen::x_MergeSeqalign(ncbi::objects::CSeq_align_set&)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_S/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp: In member function 'void ncbi::align_format::CVecscreen::x_MergeSeqalign(ncbi::objects::CSeq_align_set&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp:448:35: warning: unused variable 'da' [-Wunused-variable] 448 | const CSeq_align& da = *x_OrigAlignsById[*di]; | ^~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp:130:39: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] - 130 | string id_str = sequence::GetTitle( bsh ); - | ~~~~~~~~~~~~~~~~~~^~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp:37: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:290:8: note: declared here - 290 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); - | ^~~~~~~~ -le-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/dbsource_item.cpp -o dbsource_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/defline_item.cpp -o defline_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp -o feature_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genome_item.cpp -o genome_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ctrl_items.cpp -o ctrl_items.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFIn file included from /usr/include/c++/14/bits/stl_algo.h:61, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CLocalBlast::Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp:207:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 207 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); + | ^ +le-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/phiblast_nucl_options.cpp -o phiblast_nucl_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/phiblast_prot_options.cpp -o phiblast_prot_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/pssm_engine.cpp -o pssm_engine.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp -o local_blast.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp -o remote_blast.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp -o seqinfosrc_seqvec.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wf/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp: In member function 'bool ncbi::blast::CRemoteBlast::LoadFromArchive()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:1660:19: warning: ignoring return value of 'bool std::vector<_Tp, _Alloc>::empty() const [with _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]', declared with attribute 'nodiscard' [-Wunused-result] + 1660 | m_Errs.empty(); + | ~~~~~~~~~~~~^~ +In file included from /usr/include/c++/14/vector:66, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:44, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbitime.hpp:65, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:35: +/usr/include/c++/14/bits/stl_vector.h:1090:7: note: declared here + 1090 | empty() const _GLIBCXX_NOEXCEPT + | ^~~~~ +In file included from /usr/include/c++/14/bits/stl_algo.h:61, from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, @@ -22675,7 +22438,12 @@ /usr/include/c++/14/bits/stl_algo.h:1908:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1908 | std::__final_insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', +ormat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp -o seqinfosrc_seqdb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp -o seqinfosrc_bioseq.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqsrc_multiseq.cpp -o seqsrc_multiseq.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqsrc_seqdb.cpp -o seqsrc_seqdb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/bl2seq.cpp -o In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, inlined from 'void ncbi::align_format::s_GetFilteredRedundantGis(ncbi::CRef, int, std::vector&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/seqalignfilter.cpp:186:6, inlined from 'void ncbi::align_format::CSeqAlignFilter::FilterBySeqDB(const ncbi::objects::CSeq_align_set&, ncbi::CRef, ncbi::objects::CSeq_align_set&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/seqalignfilter.cpp:213:42: @@ -22689,216 +22457,23 @@ /usr/include/c++/14/bits/stl_algo.h:1908:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1908 | std::__final_insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -4 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_config.cpp -o win_mask_config.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o -/bin/rm -f libxalgowinmask.so .libxalgowinmask.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxalgowinmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqmasks_io -lxobjread -lxobjutil -lxobjmgr -lseq -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxalgowinmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgowinmask.so -/bin/ln -f .xalgowinmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgowinmask.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -cd algo/blast/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api TMPL=xblast -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp: In member function 'void ncbi::objects::CPrimaryItem::x_GetStrForPrimary(ncbi::objects::CBioseqContext&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp:300:63: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] - 300 | if ( ctx.IsRefSeq() && last_stop > -1 && (this_start > (last_stop + 1)) ) { - | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp:301:28: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 301 | if (this_start < (15 + last_stop) ) { - | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ -OURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/taxFormat.cpp -o taxFormat.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o -/bin/rm -f libalign_format.so .libalign_format.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libalign_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -ltaxon1 -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libalign_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libalign_format.so -/bin/ln -f .align_format.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.align_format.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -cd app/winmasker/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_aux.cpp -o blast_aux.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_cxx.cpp -o blast_options_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_local_priv.cpp -o blast_options_local_priv.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_builder.cpp -o blast_options_builder.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_setup_cxx.cpp -o blast_setup_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/locus_item.cpp -o locus_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp -o primary_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/reference_item.cpp -o reference_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/segment_item.cpp -o segment_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/sequence_item.cpp -o sequence_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp -o source_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp:346:21: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CBioSource_Base::TGenome' {aka 'int'} and 'const unsigned int' [-Wsign-compare] - 346 | if ( genome >= s_organelle_prefix_size ) { - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:100:35: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] - 100 | return m_Opts->GetFilterString(); /* NCBI_FAKE_WARNING */ - | ~~~~~~~~~~~~~~~~~~~~~~~^~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here - 178 | NCBI_DEPRECATED char* GetFilterString() const; - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'void ncbi::blast::CBlastOptionsHandle::SetFilterString(const char*, bool)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:106:28: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] - 106 | m_Opts->SetFilterString(f, clear); /* NCBI_FAKE_WARNING */ - | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here - 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); - | ^~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/main.cpp -o main.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgowinmask -lxalgodustmask -lblast -lcomposition_adjustment -lseqmasks_io -lseqdb -lblastdb -ltables -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o windowmasker -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/windowmasker -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -cd objtools/align_format/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -E_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_seqalign.cpp -o blast_seqalign.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp -o blast_options_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_nucl_options.cpp -o blast_nucl_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/disc_nucl_options.cpp -o disc_nucl_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_prot_options.cpp -o blast_prot_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_options.cpp -o psiblast_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/qualifiers.cpp: In member function 'virtual void ncbi::objects::CFlatSeqIdQVal::Format(ncbi::objects::TFlatQuals&, const ncbi::CTempString&, ncbi::objects::CBioseqContext&, ncbi::objects::IFlatQVal::TFlags) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/qualifiers.cpp:1105:10: warning: unused variable 'bHtml' [-Wunused-variable] - 1105 | bool bHtml = ctx.Config().DoHTML(); - | ^~~~~ -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/version_item.cpp -o version_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/wgs_item.cpp -o wgs_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/tsa_item.cpp -o tsa_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/flat_seqloc.cpp -o flat_seqloc.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/qualifiers.cpp -o qualifiers.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/context.cpp -o context.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-stmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpk -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_rps_options.cpp -o blast_rps_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blastx_options.cpp -o blastx_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/tblastx_options.cpp -o tblastx_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/tblastn_options.cpp -o tblastn_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/rpstblastn_options.cpp -o rpstblastn_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducib/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp: In lambda function: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:3098:30: warning: possibly dangling reference to a temporary [-Wdangling-reference] - 3098 | const CSeq_feat& original_feat = sfx.GetMappedFeat().GetOriginalFeature(); // it->GetOriginalFeature(); - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:3098:84: note: the temporary was destroyed at the end of the full expression 'ncbi::objects::CFeatureIndex::GetMappedFeat() const().ncbi::objects::CMappedFeat::GetOriginalFeature()' - 3098 | const CSeq_feat& original_feat = sfx.GetMappedFeat().GetOriginalFeature(); // it->GetOriginalFeature(); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp: At global scope: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:969:13: warning: 'bool ncbi::objects::s_NsAreGaps(const CBioseq_Handle&, CBioseqContext&)' defined but not used [-Wunused-function] - 969 | static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx) - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp: In member function 'bool ncbi::blast::CRemoteBlast::LoadFromArchive()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:1660:19: warning: ignoring return value of 'bool std::vector<_Tp, _Alloc>::empty() const [with _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]', declared with attribute 'nodiscard' [-Wunused-result] - 1660 | m_Errs.empty(); - | ~~~~~~~~~~~~^~ -In file included from /usr/include/c++/14/vector:66, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:44, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbitime.hpp:65, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:35: -/usr/include/c++/14/bits/stl_vector.h:1090:7: note: declared here - 1090 | empty() const _GLIBCXX_NOEXCEPT - | ^~~~~ -p -o tabularinof_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o align_format_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/align_format_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CLocalBlast::Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp:207:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 207 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); - | ^ -le-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/phiblast_nucl_options.cpp -o phiblast_nucl_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/phiblast_prot_options.cpp -o phiblast_prot_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/pssm_engine.cpp -o pssm_engine.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp -o local_blast.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp -o remote_blast.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp -o seqinfosrc_seqvec.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wfrong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp -o gather_items.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/embl_gather.cpp -o embl_gather.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genbank_gather.cpp -o genbank_gather.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/flat_file_generator.cpp -o flat_file_generator.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/item_formatter.cpp -o item_formatter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/embl_formatter.cpp -o embl_formatter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ff/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CRemoteBlast::GetResultSet()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CRemoteBlast::GetResultSet()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:2238:99: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 2238 | (new CBlastAncillaryData(lambdas, Ks, Hs, effective_search_space, m_Task == "psiblast")); | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genbank_formatter.cpp:285:15: warning: 'std::string ncbi::objects::s_get_anchor_html(const std::string&, ncbi::TGi)' defined but not used [-Wunused-function] - 285 | static string s_get_anchor_html(const string & sAnchorName, TGi iGi ) - | ^~~~~~~~~~~~~~~~~ -ormat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp -o seqinfosrc_seqdb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp -o seqinfosrc_bioseq.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqsrc_multiseq.cpp -o seqsrc_multiseq.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqsrc_seqdb.cpp -o seqsrc_seqdb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC 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-Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-stron/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ReadAsciiMsa(ncbi::CNcbiIstream&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:125:20: warning: 'void ncbi::CAlnReader::Read(bool, bool, ncbi::objects::ILineErrorListener*)' is deprecated [-Wdeprecated-declarations] 125 | reader.Read(false, true); | ~~~~~~~~~~~^~~~~~~~~~~~~ @@ -22910,13 +22485,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:376:22: warning: comparison of integer expressions of different signedness: 'int' and 'Uint4' {aka 'unsigned int'} [-Wsign-compare] 376 | while (k < m_Msa->dimensions->query_length && | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_iteration.cpp -o psiblast_iteration.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psi_pssm_input.cpp -o psi_pssm_input.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-stronIn file included from /usr/include/c++/14/list:66, +In file included from /usr/include/c++/14/list:66, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_stack.hpp:36, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:42, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -22961,28 +22530,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_aux_priv.cpp:459:31: note: parameter passing for argument of type 'std::__cxx11::list::const_iterator' changed in GCC 7.1 459 | freq_ratios.insert(itr, diff, 0.0); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ -st+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gap_item.cpp -o gap_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genome_project_item.cpp -o genome_project_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/sam_formatter.cpp -o sam_formatter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/cigar_formatter.cpp -o cigar_formatter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_iter.cpp -o gather_iter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/html_anchor_item.cpp -o html_anchor_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_Fg -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o +g -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast_advprot_options.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blastp_kmer_options.cpp -o blastp_kmer_options.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/version.cpp -o version.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/ILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/inst_info_map.cpp -o inst_info_map.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gene_finder.cpp -o gene_finder.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o -/bin/rm -f libxformat.so .libxformat.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o flat_file_html.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxalnmgr -lxobjutil -ltaxon3 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxformat.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxformat.so -/bin/ln -f .xformat.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xformat.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -rps_aux.cpp -o rps_aux.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o @@ -22992,13 +22545,121 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp:117:1: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 117 | CBlastAncillaryData::CBlastAncillaryData(pair lambda, | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +cd objtools/edit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=edit UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp: In member function 'void ncbi::objects::edit::CPromote::x_PromoteCdregion(ncbi::objects::CSeq_feat&, TRnaMap*) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:224:51: warning: 'static void ncbi::objects::CCdregion_translate::TranslateCdregion(std::string&, const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, bool, bool, bool*, ETranslationLengthProblemOptions)' is deprecated [-Wdeprecated-declarations] + 224 | CCdregion_translate::TranslateCdregion(data, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ + 225 | feat, + | ~~~~~ + 226 | x_Scope(), + | ~~~~~~~~~~ + 227 | include_stop, + | ~~~~~~~~~~~~~ + 228 | remove_trailingX); + | ~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:52: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:966:17: note: declared here + 966 | static void TranslateCdregion(string& prot, + | ^~~~~~~~~~~~~~~~~ =2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_search.cpp -o local_search.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_search.cpp -o remote_search.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/query_data.cpp -o query_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/objmgr_query_data.cpp -o objmgr_query_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-proIn file included from /usr/include/c++/14/bits/stl_algo.h:61, +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-proIn file included from /usr/include/c++/14/map:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:32: +/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = ncbi::objects::CBioseq_Handle; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]': +/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/map:63: +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CBioseq_Handle; _Tp = ncbi::CConstRef; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'void ncbi::objects::edit::CPromote::x_CopyCdregionToRNA(const ncbi::objects::CSeq_feat&, ncbi::objects::CBioseq_Handle&, TRnaMap*) const' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:318:49: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = ncbi::objects::CBioseq_Handle; _Tp = ncbi::CConstRef; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'void ncbi::objects::edit::CPromote::x_PromoteFeatures(ncbi::objects::CSeq_annot&) const' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:163:36: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o writedb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/writedb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gene_utils.cpp -o gene_utils.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp -o seq_entry_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp -o promote.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/autodef_with_tax.cpp -o autodef_with_tax.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/field_handler.cpp -o field_handler.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::ConvertRawToDeltaByNs(ncbi::objects::CSeq_inst&, size_t, int, size_t, int, bool, int, int, int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1850:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 1850 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { + | ~~~~~~^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1852:74: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 1852 | } else if (n_len >= min_known && (max_known < 0 || n_len <= max_known)) { + | ~~~~~~^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1875:63: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 1875 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { + | ~~~~~~^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1877:66: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 1877 | } else if (n_len >= min_known && (max_known < 0 || n_len <= max_known)) { + | ~~~~~~^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::UpdateSeqLength(ncbi::CAutoInitRef&, ncbi::objects::CBioseq_Handle&, ncbi::objects::CSeqMap_CI&, ncbi::objects::CSeq_inst_Base::TLength&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqSubMap' not handled in switch [-Wswitch] + 2458 | switch (seqmap_ci.GetType()) { + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqRef' not handled in switch [-Wswitch] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqEnd' not handled in switch [-Wswitch] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqChunk' not handled in switch [-Wswitch] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqLiteral' not handled in switch [-Wswitch] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'bool ncbi::objects::edit::s_FindSegment(const ncbi::objects::CDense_seg&, ncbi::objects::CDense_seg_Base::TDim, ncbi::TSeqPos, ncbi::objects::CDense_seg_Base::TNumseg&, ncbi::TSeqPos&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2881:21: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] + 2881 | if (pos >= start && pos < start + len) { + | ~~~~^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2881:39: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] + 2881 | if (pos >= start && pos < start + len) { + | ~~~~^~~~~~~~~~~~~ +In file included from /usr/include/c++/14/bits/stl_algo.h:61, from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, @@ -23023,6 +22684,20 @@ /usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +OURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/taxFormat.cpp -o taxFormat.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o +/bin/rm -f libalign_format.so .libalign_format.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libalign_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -ltaxon1 -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libalign_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libalign_format.so +/bin/ln -f .align_format.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.align_format.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +cd objtools/align_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/14/bits/stl_algo.h:4771:18, inlined from 'void ncbi::blast::GetFilteredRedundantGis(const IBlastSeqInfoSrc&, int, std::vector&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp:110:6: @@ -23043,12 +22718,50 @@ /usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1822 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. tector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In constructor 'ncbi::objects::edit::CSeqIdGuesser::CSeqIdGuesser(ncbi::objects::CSeq_entry_Handle)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:92:48: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] + 92 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); + | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/serialbase.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/general/Dbtag_.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/general/Dbtag.hpp:44, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:31: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here + 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, + | ^~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In static member function 'static std::vector > ncbi::objects::edit::CSeqIdGuesser::GetIdStrings(ncbi::objects::CBioseq_Handle)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:171:44: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] + 171 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); + | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here + 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, + | ^~~~ +-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/apply_object.cpp -o apply_object.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/string_constraint.cpp -o string_constraint.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp -o seqid_guesser.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/dblink_field.cpp -o dblink_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/struc_comm_field.cpp -o struc_comm_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_desc_field.cpp -o text_desc_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cppath/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_blk.cpp -o split_query_blk.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/winmask_filter.cpp -o winmask_filter.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/subj_ranges_set.cpp -o subj_ranges_set.o @@ -23119,6 +22832,19 @@ /usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, long long int>*, std::vector, long long int> > >' changed in GCC 7.1 1822 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp: In function 'bool ncbi::objects::edit::AdjustForCDSPartials(const ncbi::objects::CSeq_feat&, ncbi::objects::CSeq_entry_Handle)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:457:57: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] + 457 | any_change |= AdjustProteinMolInfoToMatchCDS((*it)->SetMolinfo(), cds); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here + 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:463:39: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] + 463 | AdjustProteinMolInfoToMatchCDS(new_molinfo_desc->SetMolinfo(), cds); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here + 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/vector:72, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:44, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -23147,11 +22873,13 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp -o magicblast.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_node.cpp -o blast_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=./build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp: In member function 'int ncbi::blast::CMagicBlast::x_Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp:148:65: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 148 | tmp_pair, 0)); - | ^ -In file included from /usr/include/c++/14/map:62, +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=.E_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gb_block_field.cpp -o gb_block_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp -o link_cds_mrna.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp -o cds_fix.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/loc_edit.cpp -o loc_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/mail_report.cpp -o mail_report.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feattable_edit.cpp -o feattable_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFIIn file included from /usr/include/c++/14/map:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, @@ -23169,6 +22897,106 @@ /usr/include/c++/14/bits/stl_tree.h:2206:5: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 2206 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp: In member function 'int ncbi::blast::CMagicBlast::x_Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp:148:65: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 148 | tmp_pair, 0)); + | ^ +p -o tabularinof_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o align_format_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/align_format_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp: In member function 'bool ncbi::objects::edit::CFindITSParser::IsLengthTooLarge(const std::string&, int, int, const std::vector&, const std::vector&, const std::vector&, int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp:259:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 259 | for (int j = i + 1; j < spans.size(); j++) + | ~~^~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/bits/stl_algobase.h:71, + from /usr/include/c++/14/algorithm:60, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/serialbase.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/general/Object_id_.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/general/Object_id.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feattable_edit.cpp:35: +/usr/include/c++/14/bits/predefined_ops.h: In function 'constexpr bool __gnu_cxx::__ops::_Iter_comp_iter<_Compare>::operator()(_Iterator1, _Iterator2) [with _Iterator1 = __gnu_cxx::__normal_iterator >; _Iterator2 = __gnu_cxx::__normal_iterator >; _Compare = bool (*)(const ncbi::objects::CSeq_id_Handle&, ncbi::objects::CSeq_id_Handle)]': +/usr/include/c++/14/bits/predefined_ops.h:157:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 157 | operator()(_Iterator1 __it1, _Iterator2 __it2) + | ^~~~~~~~ +/usr/include/c++/14/bits/predefined_ops.h:157:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +In file included from /usr/include/c++/14/algorithm:61: +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, + | ^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1770 | __insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +In file included from /usr/include/c++/14/bits/stl_algo.h:61: +/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = ncbi::objects::CSeq_id_Handle; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, + | ^~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_heap.h:340:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 340 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, + | ^~~~~~~~~~~ +/usr/include/c++/14/bits/stl_heap.h:340:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1876 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::__partial_sort(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1868:25, + inlined from 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1884:27: +/usr/include/c++/14/bits/stl_algo.h:1593:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1593 | std::__make_heap(__first, __middle, __comp); + | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from '_RandomAccessIterator std::__unguarded_partition_pivot(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1855:34, + inlined from 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1889:38: +/usr/include/c++/14/bits/stl_algo.h:90:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 90 | if (__comp(__b, __c)) + | ~~~~~~^~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:92:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 92 | else if (__comp(__a, __c)) + | ~~~~~~^~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:97:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 97 | else if (__comp(__a, __c)) + | ~~~~~~^~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:99:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 99 | else if (__comp(__b, __c)) + | ~~~~~~^~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': +/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bool (*)(const ncbi::objects::CSeq_id_Handle&, ncbi::objects::CSeq_id_Handle)]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, + inlined from 'void ncbi::objects::edit::CFeatTableEdit::GenerateLocusTags()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feattable_edit.cpp:1377:14: +/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1905 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1906 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1907 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bool (*)(const ncbi::objects::CSeq_id_Handle&, ncbi::objects::CSeq_id_Handle)]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, + inlined from 'void ncbi::objects::edit::CFeatTableEdit::GenerateLocusTags()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feattable_edit.cpp:1377:14: +/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1822 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_usage_report.cpp -o blast_usage_report.o /bin/rm -f libxblast.so .libxblast.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libxblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o blast_node.o blast_usage_report.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread @@ -23177,28 +23005,124 @@ /bin/ln -f .xblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -cd algo/blast/blastinput/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/proteinkmer/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=proteinkmer UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/blastinput/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/proteinkmer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=proteinkmer UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j3 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp: In function 'ncbi::SIZE_TYPE ncbi::objects::edit::FindWithOptions(const std::string&, const std::string&, ncbi::SIZE_TYPE, bool, bool)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp:47:25: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] + 47 | pos = NStr::Find(str, pattern, pos, NPOS, NStr::eFirst, str_case); + | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/edit/parse_text_options.hpp:34, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp:33: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here + 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, + | ^~~~ +LE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gaps_edit.cpp -o gaps_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/source_edit.cpp -o source_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp -o rna_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/remote_updater.cpp -o remote_updater.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/eutils_updater.cpp -o eutils_updater.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp -o parse_text_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protec/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp: In function 'void ncbi::neighbor_query(const std::vector >&, const uint64_t*, std::vector >&, blast::CMinHashFile&, int, int, double, TBlastKmerPrelimScoreVector&, BlastKmerStats&, int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:806:38: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] + 806 | if (last_oid == *i) + | ~~~~~~~~~^~~~~ +In file included from /usr/include/c++/14/map:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbicntr.hpp:40, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiobj.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiargs.hpp:84, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiapp_api.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiapp.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34: +/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]': +/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 + 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/map:63: +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]', + inlined from 'void ncbi::neighbor_query(const std::vector >&, const uint64_t*, std::vector >&, blast::CMinHashFile&, int, int, double, TBlastKmerPrelimScoreVector&, BlastKmerStats&, int)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:837:50: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]', + inlined from 'void ncbi::neighbor_query(const std::vector >&, const uint64_t*, std::vector >&, blast::CMinHashFile&, int, int, double, TBlastKmerPrelimScoreVector&, BlastKmerStats&, int)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:838:27: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmer.cpp -o blastkmer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerindex.cpp -o blastkmerindex.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp -o blastkmeroptions.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp -o blastkmerresults.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp -o blastkmerutils.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp: In member function 'void ncbi::blast::CMinHashFile::GetMinHits(int, int&, std::vector&) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp:77:25: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 77 | if (hits.size() < numHashes) + | ~~~~~~~~~~~~^~~~~~~~~~~ +In file included from /usr/include/c++/14/map:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/eutils/api/eutils.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/edit/eutils_updater.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/eutils_updater.cpp:35: +/usr/include/c++/14/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]': +/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/map:63: +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long int; _Tp = ncbi::CConstRef; _Compare = std::less; _Alloc = std::allocator > >]', + inlined from 'virtual ncbi::CRef ncbi::objects::edit::CEUtilsUpdaterWithCache::GetPubmedEntry(ncbi::TEntrezId, ncbi::objects::edit::EPubmedError*)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/eutils_updater.cpp:591:25: +/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp: In function 'ncbi::CRef s_MakeEmptyResults(ncbi::CRef, const ncbi::blast::CBlastOptions&, ncbi::CRef, ncbi::blast::TSearchMessages&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp:132:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 132 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); + | ^ In file included from /usr/include/c++/14/vector:72, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:44, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -23278,68 +23202,13 @@ /usr/include/c++/14/bits/stl_vector.h:1568:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1568 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmer.cpp -o blastkmer.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerindex.cpp -o blastkmerindex.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp -o blastkmeroptions.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp -o blastkmerresults.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp -o blastkmerutils.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_input.cpp -o blast_input.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_fasta_input.cpp -o blast_fasta_input.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_scope_src.cpp -o blast_scope_src.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_args.cpp -o blast_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/cmdline_flags.cpp -o cmdline_flags.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURC/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp: In function 'void ncbi::neighbor_query(const std::vector >&, const uint64_t*, std::vector >&, blast::CMinHashFile&, int, int, double, TBlastKmerPrelimScoreVector&, BlastKmerStats&, int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:806:38: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] - 806 | if (last_oid == *i) - | ~~~~~~~~~^~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp: In member function 'void ncbi::blast::CMinHashFile::GetMinHits(int, int&, std::vector&) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp:77:25: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 77 | if (hits.size() < numHashes) - | ~~~~~~~~~~~~^~~~~~~~~~~ -In file included from /usr/include/c++/14/map:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbicntr.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiobj.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiargs.hpp:84, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiapp_api.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiapp.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34: -/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]': -/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 - 2454 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/map:63: -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]', - inlined from 'void ncbi::neighbor_query(const std::vector >&, const uint64_t*, std::vector >&, blast::CMinHashFile&, int, int, double, TBlastKmerPrelimScoreVector&, BlastKmerStats&, int)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:837:50: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]', - inlined from 'void ncbi::neighbor_query(const std::vector >&, const uint64_t*, std::vector >&, blast::CMinHashFile&, int, int, double, TBlastKmerPrelimScoreVector&, BlastKmerStats&, int)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:838:27: -/usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp: In function 'ncbi::CRef s_MakeEmptyResults(ncbi::CRef, const ncbi::blast::CBlastOptions&, ncbi::CRef, ncbi::blast::TSearchMessages&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp:132:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 132 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); - | ^ -LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp -o mhfile.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCLARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp -o mhfile.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/pearson.cpp -o pearson.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o /bin/rm -f libproteinkmer.so .libproteinkmer.so.stamp @@ -23349,90 +23218,62 @@ /bin/ln -f .proteinkmer.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.proteinkmer.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -cd algo/blast/format/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/igblast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +cd algo/blast/igblast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j3 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format TMPL=xblastformat -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -E -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_input_aux.cpp -o blast_input_aux.o +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j4 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_object_description.cpp:336:15: warning: 'std::string ncbi::objects::edit::GetTextObjectDescription(const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, const std::string&)' defined but not used [-Wunused-function] + 336 | static string GetTextObjectDescription(const CSeq_feat& seq_feat, CScope& scope, const string& product) + | ^~~~~~~~~~~~~~~~~~~~~~~~ +tor-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/publication_edit.cpp -o publication_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gap_trim.cpp -o gap_trim.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/external_annots.cpp -o external_annots.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feature_propagate.cpp -o feature_propagate.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_object_description.cpp -o text_object_description.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_edit.cpp -o seq_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_input_aux.cpp -o blast_input_aux.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blastp_args.cpp -o blastp_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blastn_args.cpp -o blastn_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/rmblastn_args.cpp -o rmblastn_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blastx_args.cpp -o blastx_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/tblastn_args.cpp -o tblastn_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -p/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml_format.cpp: In function 'void ncbi::s_SeqAlignSetToXMLHits(std::__cxx11::list >&, const objects::CSeq_align_set&, objects::CScope*, const CBlastFormattingMatrix*, const TMaskedQueryRegions*, bool, int, int, CNcbiOstream*)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:501:102: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations] - 501 | unique_ptr xml_one_hit_os (new CObjectOStreamXml (one_hit_os,false)); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbicntr.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiobj.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/object_manager.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:34: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/objostrxml.hpp:66:26: note: declared here - 66 | NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut)); - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:1209:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' - 1209 | # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED - | ^~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml_format.cpp: In function 'bool ncbi::s_SerializeAndSplitBy(const CSerialObject&, const char*, std::string&, std::string&, bool, bool)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:785:98: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations] - 785 | unique_ptr xml_one_iter_os(new CObjectOStreamXml (one_iter_ss_os,false)); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/objostrxml.hpp:66:26: note: declared here - 66 | NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut)); - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:1209:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' - 1209 | # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED - | ^~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastfmtutil.cpp -o blastfmtutil.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml_format.cpp -o blastxml_format.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml2_format.cpp -o blastxml2_format.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp -o blast_format.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/data4xmlformat.cpp -o data4xmlformat.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILEIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/data4xml2format.cpp:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xml2format.hpp:140:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] - 140 | m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */ - | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xml2format.hpp:42: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here - 178 | NCBI_DEPRECATED char* GetFilterString() const; - | ^~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/data4xmlformat.cpp:37: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:155:38: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] - 155 | m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */ - | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:42: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here - 178 | NCBI_DEPRECATED char* GetFilterString() const; - | ^~~~~~~~~~~~~~~ +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/pub_fix.cpp -o pub_fix.o +/bin/rm -f libxobjedit.so .libxobjedit.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxobjedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_utils.o seq_entry_edit.o promote.o autodef_with_tax.o field_handler.o apply_object.o string_constraint.o seqid_guesser.o dblink_field.o struc_comm_field.o text_desc_field.o gb_block_field.o link_cds_mrna.o cds_fix.o loc_edit.o mail_report.o feattable_edit.o gaps_edit.o source_edit.o rna_edit.o remote_updater.o eutils_updater.o parse_text_options.o publication_edit.o gap_trim.o external_annots.o feature_propagate.o text_object_description.o seq_edit.o pub_fix.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjutil -ltaxon3 -lvalid -lxlogging -leutils -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxobjedit.so +/bin/ln -f .xobjedit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjedit.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o /bin/rm -f libigblast.so .libigblast.so.stamp @@ -23442,81 +23283,51 @@ /bin/ln -f .igblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.igblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o proteinkmer_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/proteinkmer_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp:49: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:155:38: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] - 155 | m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */ - | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/blast_format.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here - 178 | NCBI_DEPRECATED char* GetFilterString() const; - | ^~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp:51: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xml2format.hpp:140:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] - 140 | m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */ - | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here - 178 | NCBI_DEPRECATED char* GetFilterString() const; - | ^~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. thread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/tblastx_args.cpp -o tblastx_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/psiblast_args.cpp -o psiblast_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/rpsblast_args.cpp -o rpsblast_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/rpstblastn_args.cpp -o rpstblastn_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/igblastn_args.cpp -o igblastn_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build//build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp: In constructor 'ncbi::blast::CIgBlastpAppArgs::CIgBlastpAppArgs()': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build//build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp: In member function 'void CompressedAascan::CompressedScanHitsFound::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:759:10: warning: unused variable 'query_length' [-Wunused-variable] + 759 | Int4 query_length = query_blk->length; + | ^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:760:10: warning: unused variable 'subject_length' [-Wunused-variable] + 760 | Int4 subject_length = subject_blk->length; + | ^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp: In constructor 'ncbi::blast::CIgBlastpAppArgs::CIgBlastpAppArgs()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp:67:16: warning: unused variable 'kFilterByDefault' [-Wunused-variable] 67 | const bool kFilterByDefault = false; | ^~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/14/memory:69, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_stack.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/sseqloc.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/blast_format.hpp:40: -/usr/include/c++/14/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*]': -/usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*; bool _TrivialValueTypes = false]', - inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, - inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, - inlined from 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:1624:35, - inlined from 'void std::vector<_Tp, _Alloc>::_M_assign_aux(_ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator]' at /usr/include/c++/14/bits/vector.tcc:331:40, - inlined from 'void std::vector<_Tp, _Alloc>::assign(_InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:829:17, - inlined from 'ncbi::CBlastFormat::CBlastFormat(const ncbi::blast::CBlastOptions&, const std::vector&, ncbi::blast::CFormattingArgs::EOutputFormat, bool, ncbi::CNcbiOstream&, int, int, ncbi::objects::CScope&, bool, bool, bool, const std::string&, bool, const std::string&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp:258:20: -/usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 137 | { return std::__do_uninit_copy(__first, __last, __result); } - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*; bool _TrivialValueTypes = false]', - inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, - inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, - inlined from 'void std::vector<_Tp, _Alloc>::_M_assign_aux(_ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator]' at /usr/include/c++/14/bits/vector.tcc:352:35, - inlined from 'void std::vector<_Tp, _Alloc>::assign(_InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:829:17, - inlined from 'ncbi::CBlastFormat::CBlastFormat(const ncbi::blast::CBlastOptions&, const std::vector&, ncbi::blast::CFormattingArgs::EOutputFormat, bool, ncbi::CNcbiOstream&, int, int, ncbi::objects::CScope&, bool, bool, bool, const std::string&, bool, const std::string&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp:258:20: -/usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 137 | { return std::__do_uninit_copy(__first, __last, __result); } - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp: In member function 'virtual void ncbi::blast::CMapperMTArgs::ExtractAlgorithmOptions(const ncbi::CArgs&, ncbi::blast::CBlastOptions&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp:205:59: warning: 'unsigned int ncbi::GetCpuCount()' is deprecated [-Wdeprecated-declarations] 205 | const int kMaxValue = static_cast(GetCpuCount()); @@ -23531,81 +23342,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:479:14: note: declared here 479 | unsigned int GetCpuCount(void) | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o proteinkmer_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/proteinkmer_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o -/bin/rm -f libblastinput.so .libblastinput.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libblastinput.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlitewrapp -lscoremat -lsqlite3 -llmdb -lpthread -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblastinput.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblastinput.so -/bin/ln -f .blastinput.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastinput.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdiag_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastdiag_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdiag_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp: In member function 'virtual void* CBlastAsyncFormatThread::Main()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp:122:49: warning: comparison of integer expressions of different signedness: 'std::map >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 122 | if (m_ResultsMap.size() != currNum) - | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/data4xml2format.cpp -o data4xml2format.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/build_archive.cpp -o build_archive.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/vecscreen_run.cpp -o vecscreen_run.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/sam.cpp -o sam.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp -o blast_async_format.o -/bin/rm -f libxblastformat.so .libxblastformat.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxblastformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blastfmtutil.o blastxml_format.o blastxml2_format.o blast_format.o data4xmlformat.o data4xml2format.o build_archive.o vecscreen_run.o sam.o blast_async_format.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxformat -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lalign_format -lblastxml -lblastxml2 -lxhtml -lxcgi -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxblastformat.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxblastformat.so -/bin/ln -f .xblastformat.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xblastformat.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp: In member function 'void CompressedAascan::CompressedScanHitsFound::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:759:10: warning: unused variable 'query_length' [-Wunused-variable] - 759 | Int4 query_length = query_blk->length; - | ^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:760:10: warning: unused variable 'subject_length' [-Wunused-variable] - 760 | Int4 subject_length = subject_blk->length; - | ^~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie aalookup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o aalookup_unit_test @@ -23613,35 +23367,17 @@ /bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/aalookup_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdiag_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastdiag_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdiag_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie aascan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o aascan_unit_test @@ -23649,17 +23385,17 @@ /bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/aascan_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:452:29: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] 452 | options->SetFilterString("L"); /* NCBI_FAKE_WARNING */ @@ -23670,24 +23406,29 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); | ^~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastengine_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastengine_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastengine_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o +/bin/rm -f libblastinput.so .libblastinput.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libblastinput.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlitewrapp -lscoremat -lsqlite3 -llmdb -lpthread -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libblastinput.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblastinput.so +/bin/ln -f .blastinput.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastinput.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastextend_unit_test @@ -23695,17 +23436,35 @@ /bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastextend_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastengine_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastengine_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastengine_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::RemoteOptionsTest::test_method()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:73:47: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] @@ -23801,35 +23560,35 @@ /bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blasthits_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastfilter_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastfilter_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastfilter_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxconnect -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o gapinfo_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gapinfo_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastoptions_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastoptions_unit_test @@ -23837,35 +23596,23 @@ /bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastoptions_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxconnect -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o gapinfo_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gapinfo_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastfilter_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastfilter_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastfilter_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o gencode_singleton_unit_test @@ -23873,35 +23620,29 @@ /bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gencode_singleton_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie delta_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o delta_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/delta_unit_test +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastsetup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastsetup_unit_test @@ -23909,17 +23650,17 @@ /bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastsetup_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie hspfilter_besthit_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o hspfilter_besthit_unit_test @@ -23927,17 +23668,17 @@ /bin/ln -f hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspfilter_besthit_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o hspfilter_culling_unit_test @@ -23945,17 +23686,17 @@ /bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspfilter_culling_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp -o hspstream_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp -o hspstream_test_util.o @@ -23964,89 +23705,89 @@ /bin/ln -f hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspstream_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie linkhsp_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o linkhsp_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/linkhsp_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie msa2pssm_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o msa2pssm_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/msa2pssm_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie magicblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o magicblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/magicblast_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie linkhsp_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o linkhsp_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/linkhsp_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie msa2pssm_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o msa2pssm_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/msa2pssm_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie ntlookup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o ntlookup_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/ntlookup_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie ntlookup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o ntlookup_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/ntlookup_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o phiblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/phiblast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o ntscan_unit_test @@ -24054,35 +23795,35 @@ /bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/ntscan_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o phiblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/phiblast_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o prelimsearch_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/prelimsearch_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie optionshandle_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o optionshandle_unit_test @@ -24090,35 +23831,17 @@ /bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/optionshandle_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o prelimsearch_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/prelimsearch_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psiblast_iteration_unit_test @@ -24126,17 +23849,17 @@ /bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_iteration_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psibl2seq_unit_test @@ -24144,17 +23867,17 @@ /bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psibl2seq_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=queryinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /usr/include/c++/14/vector:72, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:44, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -24165,15 +23888,16 @@ from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/expr.hpp:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/test_boost.hpp:44, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:38: -/usr/include/c++/14/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = PSICdMsaCellData; _Alloc = std::allocator]': -/usr/include/c++/14/bits/vector.tcc:700:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34: +/usr/include/c++/14/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/14/bits/vector.tcc:700:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 700 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/vector:66: -In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = PSICdMsaCellData; _Alloc = std::allocator]', - inlined from 'CPssmInputWithSingleCD::CPssmInputWithSingleCD()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:1250:21: -/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'ncbi::CNcbiMatrix::CNcbiMatrix(size_t, size_t, T) [with T = double]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/util/math/matrix.hpp:293:18, + inlined from 'void PssmEngineFreqRatios::AllZerosFreqRatios::test_method()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:85:63: +/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1037 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/vector:72, @@ -24186,16 +23910,15 @@ from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/expr.hpp:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/test_boost.hpp:44, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34: -/usr/include/c++/14/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/14/bits/vector.tcc:700:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:38: +/usr/include/c++/14/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = PSICdMsaCellData; _Alloc = std::allocator]': +/usr/include/c++/14/bits/vector.tcc:700:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 700 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/vector:66: -In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'ncbi::CNcbiMatrix::CNcbiMatrix(size_t, size_t, T) [with T = double]' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/util/math/matrix.hpp:293:18, - inlined from 'void PssmEngineFreqRatios::AllZerosFreqRatios::test_method()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:85:63: -/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = PSICdMsaCellData; _Alloc = std::allocator]', + inlined from 'CPssmInputWithSingleCD::CPssmInputWithSingleCD()' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:1250:21: +/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1037 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -24205,109 +23928,73 @@ /bin/ln -f pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/pssmenginefreqratios_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psiblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=queryinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o pssmcreate_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/pssmcreate_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o queryinfo_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/queryinfo_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rmblast_blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o querydata_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/querydata_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rmblast_traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o queryinfo_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/queryinfo_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=rmblast_blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o redoalignment_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/redoalignment_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o pssmcreate_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/pssmcreate_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=rmblast_traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp -o rmblast_blasthits_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rmblast_blasthits_unit_test @@ -24315,17 +24002,17 @@ /bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_blasthits_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp -o rmblast_traceback_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rmblast_traceback_unit_test @@ -24333,17 +24020,17 @@ /bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_traceback_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rps_unit_test @@ -24351,53 +24038,53 @@ /bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rps_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie remote_blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o remote_blast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/remote_blast_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o scoreblk_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/scoreblk_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o scoreblk_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/scoreblk_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie remote_blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o remote_blast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/remote_blast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o seqinfosrc_unit_test @@ -24405,17 +24092,17 @@ /bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqinfosrc_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o search_strategy_unit_test @@ -24423,17 +24110,17 @@ /bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/search_strategy_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp -o seqsrc_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp -o seqsrc_mock.o @@ -24444,17 +24131,17 @@ /bin/ln -f seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqsrc_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie setupfactory_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o setupfactory_unit_test @@ -24462,17 +24149,17 @@ /bin/ln -f setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/setupfactory_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=stat_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp -o stat_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie stat_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o stat_unit_test @@ -24480,17 +24167,17 @@ /bin/ln -f stat_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/stat_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp -o subj_ranges_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie subj_ranges_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o subj_ranges_unit_test @@ -24498,35 +24185,35 @@ /bin/ln -f subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/subj_ranges_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o split_query_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/split_query_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tracebacksearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o tracebacksearch_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tracebacksearch_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o traceback_unit_test @@ -24534,71 +24221,511 @@ /bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/traceback_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie version_reference_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o version_reference_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/version_reference_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/segmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o split_query_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/split_query_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd objtools/cleanup/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=convert2blastmask /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie convert2blastmask.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o convert2blastmask +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f convert2blastmask /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f convert2blastmask /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/convert2blastmask +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie uniform_search_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o uniform_search_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/uniform_search_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::x_HasShortIntron(const ncbi::objects::CSeq_loc&, size_t)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp:2875:68: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 2875 | if (abs((long int)this_start - (long int)prev_end) < min_len) { + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker/segmasker.cpp -o segmasker.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie segmasker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o segmasker +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/segmasker +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp -o autogenerated_extended_cleanup.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp -o cleanup.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_utils.cpp -o cleanup_utils.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/gene_qual_normalization.cpp -o gene_qual_normalization.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp: In static member function 'static bool ncbi::objects::CCleanup::s_AddNumToUserField(ncbi::objects::CUser_field&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:398:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] + 398 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetStrs().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:404:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 404 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetInts().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:410:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 410 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetReals().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:416:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector*>::size_type' {aka 'unsigned int'} [-Wsign-compare] + 416 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetOss().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp -o cleanup_user_object.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_author.cpp -o cleanup_author.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_pub.cpp -o cleanup_pub.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp -o capitalization_string.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/fix_feature_id.cpp -o fix_feature_id.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_message.cpp -o cleanup_message.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/influenza_set.cpp -o influenza_set.o +/bin/rm -f libxcleanup.so .libxcleanup.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxcleanup.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o gene_qual_normalization.o cleanup_user_object.o cleanup_author.o cleanup_pub.o newcleanupp.o capitalization_string.o fix_feature_id.o cleanup_message.o influenza_set.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxobjutil -lvalid -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre2-8 +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcleanup.so +/bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcleanup.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +cd objtools/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/accession_item.cpp -o accession_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/basecount_item.cpp -o basecount_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/comment_item.cpp -o comment_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/contig_item.cpp -o contig_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/date_item.cpp -o date_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducib/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp: In function 'const std::string& ncbi::objects::s_AaName(int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp:2135:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare] + 2135 | if ( idx > 0 && idx < ArraySize(s_TrnaList) ) { + | ~~~~^~~~~~~~~~~~~~~~~~~~~~~ +le-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/dbsource_item.cpp -o dbsource_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/defline_item.cpp -o defline_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp -o feature_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genome_item.cpp -o genome_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ctrl_items.cpp -o ctrl_items.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OF/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp: In member function 'void ncbi::objects::CPrimaryItem::x_GetStrForPrimary(ncbi::objects::CBioseqContext&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp:300:63: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] + 300 | if ( ctx.IsRefSeq() && last_stop > -1 && (this_start > (last_stop + 1)) ) { + | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp:301:28: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 301 | if (this_start < (15 + last_stop) ) { + | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ +FSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/locus_item.cpp -o locus_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp -o primary_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/reference_item.cpp -o reference_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/segment_item.cpp -o segment_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/sequence_item.cpp -o sequence_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp -o source_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp:346:21: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CBioSource_Base::TGenome' {aka 'int'} and 'const unsigned int' [-Wsign-compare] + 346 | if ( genome >= s_organelle_prefix_size ) { + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/version_item.cpp -o version_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/wgs_item.cpp -o wgs_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/tsa_item.cpp -o tsa_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/flat_seqloc.cpp -o flat_seqloc.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/qualifiers.cpp -o qualifiers.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/context.cpp -o context.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-st/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/qualifiers.cpp: In member function 'virtual void ncbi::objects::CFlatSeqIdQVal::Format(ncbi::objects::TFlatQuals&, const ncbi::CTempString&, ncbi::objects::CBioseqContext&, ncbi::objects::IFlatQVal::TFlags) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/qualifiers.cpp:1105:10: warning: unused variable 'bHtml' [-Wunused-variable] + 1105 | bool bHtml = ctx.Config().DoHTML(); + | ^~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp: In lambda function: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:3098:30: warning: possibly dangling reference to a temporary [-Wdangling-reference] + 3098 | const CSeq_feat& original_feat = sfx.GetMappedFeat().GetOriginalFeature(); // it->GetOriginalFeature(); + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:3098:84: note: the temporary was destroyed at the end of the full expression 'ncbi::objects::CFeatureIndex::GetMappedFeat() const().ncbi::objects::CMappedFeat::GetOriginalFeature()' + 3098 | const CSeq_feat& original_feat = sfx.GetMappedFeat().GetOriginalFeature(); // it->GetOriginalFeature(); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp: At global scope: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:969:13: warning: 'bool ncbi::objects::s_NsAreGaps(const CBioseq_Handle&, CBioseqContext&)' defined but not used [-Wunused-function] + 969 | static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx) + | ^~~~~~~~~~~ +rong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp -o gather_items.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/embl_gather.cpp -o embl_gather.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genbank_gather.cpp -o genbank_gather.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/flat_file_generator.cpp -o flat_file_generator.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/item_formatter.cpp -o item_formatter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/embl_formatter.cpp -o embl_formatter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genbank_formatter.cpp -o genbank_formatter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/format_item_ostream.cpp -o format_item_ostream.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/item_ostream.cpp -o item_ostream.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ostream_text_ostream.cpp -o ostream_text_ostream.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/origin_item.cpp -o origin_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genbank_formatter.cpp:285:15: warning: 'std::string ncbi::objects::s_get_anchor_html(const std::string&, ncbi::TGi)' defined but not used [-Wunused-function] + 285 | static string s_get_anchor_html(const string & sAnchorName, TGi iGi ) + | ^~~~~~~~~~~~~~~~~ +/c++/src/objtools/format/ftable_gather.cpp -o ftable_gather.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ftable_formatter.cpp -o ftable_formatter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/flat_file_config.cpp -o flat_file_config.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/flat_file_html.cpp -o flat_file_html.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/alignment_item.cpp -o alignment_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gap_item.cpp -o gap_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genome_project_item.cpp -o genome_project_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/sam_formatter.cpp -o sam_formatter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/cigar_formatter.cpp -o cigar_formatter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_iter.cpp -o gather_iter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/html_anchor_item.cpp -o html_anchor_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/inst_info_map.cpp -o inst_info_map.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gene_finder.cpp -o gene_finder.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o +/bin/rm -f libxformat.so .libxformat.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o flat_file_html.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxalnmgr -lxobjutil -ltaxon3 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxformat.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxformat.so +/bin/ln -f .xformat.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xformat.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +cd algo/blast/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format TMPL=xblastformat -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml_format.cpp: In function 'void ncbi::s_SeqAlignSetToXMLHits(std::__cxx11::list >&, const objects::CSeq_align_set&, objects::CScope*, const CBlastFormattingMatrix*, const TMaskedQueryRegions*, bool, int, int, CNcbiOstream*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:501:102: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations] + 501 | unique_ptr xml_one_hit_os (new CObjectOStreamXml (one_hit_os,false)); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbicntr.hpp:40, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiobj.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/object_manager.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:34: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/objostrxml.hpp:66:26: note: declared here + 66 | NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut)); + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:1209:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' + 1209 | # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED + | ^~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml_format.cpp: In function 'bool ncbi::s_SerializeAndSplitBy(const CSerialObject&, const char*, std::string&, std::string&, bool, bool)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:785:98: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations] + 785 | unique_ptr xml_one_iter_os(new CObjectOStreamXml (one_iter_ss_os,false)); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/objostrxml.hpp:66:26: note: declared here + 66 | NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut)); + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:1209:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' + 1209 | # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED + | ^~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp:49: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:155:38: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] + 155 | m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */ + | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/blast_format.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here + 178 | NCBI_DEPRECATED char* GetFilterString() const; + | ^~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp:51: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xml2format.hpp:140:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] + 140 | m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */ + | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here + 178 | NCBI_DEPRECATED char* GetFilterString() const; + | ^~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastfmtutil.cpp -o blastfmtutil.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml_format.cpp -o blastxml_format.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastxml2_format.cpp -o blastxml2_format.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp -o blast_format.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/data4xmlformat.cpp -o data4xmlformat.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILEIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/data4xmlformat.cpp:37: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:155:38: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] + 155 | m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */ + | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:42: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here + 178 | NCBI_DEPRECATED char* GetFilterString() const; + | ^~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/data4xml2format.cpp:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xml2format.hpp:140:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] + 140 | m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */ + | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xml2format.hpp:42: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here + 178 | NCBI_DEPRECATED char* GetFilterString() const; + | ^~~~~~~~~~~~~~~ +In file included from /usr/include/c++/14/memory:69, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_stack.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/sseqloc.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/blast_format.hpp:40: +/usr/include/c++/14/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*]': +/usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/14/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*; bool _TrivialValueTypes = false]', + inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, + inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, + inlined from 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:1624:35, + inlined from 'void std::vector<_Tp, _Alloc>::_M_assign_aux(_ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator]' at /usr/include/c++/14/bits/vector.tcc:331:40, + inlined from 'void std::vector<_Tp, _Alloc>::assign(_InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:829:17, + inlined from 'ncbi::CBlastFormat::CBlastFormat(const ncbi::blast::CBlastOptions&, const std::vector&, ncbi::blast::CFormattingArgs::EOutputFormat, bool, ncbi::CNcbiOstream&, int, int, ncbi::objects::CScope&, bool, bool, bool, const std::string&, bool, const std::string&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp:258:20: +/usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 137 | { return std::__do_uninit_copy(__first, __last, __result); } + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*; bool _TrivialValueTypes = false]', + inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*]' at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, + inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = ncbi::align_format::CAlignFormatUtil::SDbInfo*; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo]' at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, + inlined from 'void std::vector<_Tp, _Alloc>::_M_assign_aux(_ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator]' at /usr/include/c++/14/bits/vector.tcc:352:35, + inlined from 'void std::vector<_Tp, _Alloc>::assign(_InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:829:17, + inlined from 'ncbi::CBlastFormat::CBlastFormat(const ncbi::blast::CBlastOptions&, const std::vector&, ncbi::blast::CFormattingArgs::EOutputFormat, bool, ncbi::CNcbiOstream&, int, int, ncbi::objects::CScope&, bool, bool, bool, const std::string&, bool, const std::string&)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp:258:20: +/usr/include/c++/14/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 137 | { return std::__do_uninit_copy(__first, __last, __result); } + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp: In member function 'virtual void* CBlastAsyncFormatThread::Main()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp:122:49: warning: comparison of integer expressions of different signedness: 'std::map >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 122 | if (m_ResultsMap.size() != currNum) + | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/data4xml2format.cpp -o data4xml2format.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/build_archive.cpp -o build_archive.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/vecscreen_run.cpp -o vecscreen_run.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/sam.cpp -o sam.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp -o blast_async_format.o +/bin/rm -f libxblastformat.so .libxblastformat.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxblastformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blastfmtutil.o blastxml_format.o blastxml2_format.o blast_format.o data4xmlformat.o data4xml2format.o build_archive.o vecscreen_run.o sam.o blast_async_format.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxformat -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lalign_format -lblastxml -lblastxml2 -lxhtml -lxcgi -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxblastformat.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxblastformat.so +/bin/ln -f .xblastformat.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xblastformat.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tracebacksearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o tracebacksearch_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tracebacksearch_unit_test +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j4 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j4 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp: In member function 'void blastinput::RangeInvalid_FromGreaterThanTo::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:1977:50: warning: ignoring return value of 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = ncbi::blast::SSeqLoc; _Alloc = std::allocator; reference = ncbi::blast::SSeqLoc&]', declared with attribute 'nodiscard' [-Wunused-result] + 1977 | try { source->GetNextSeqLocBatch(scope).front(); } + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ +In file included from /usr/include/c++/14/vector:66, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:44, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbicntr.hpp:40, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiobj.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/object_manager.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:34: +/usr/include/c++/14/bits/stl_vector.h:1211:7: note: declared here + 1211 | front() _GLIBCXX_NOEXCEPT + | ^~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp: In member function 'void blastinput::RangeInvalid_FromGreaterThanSequenceLength::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:1997:50: warning: ignoring return value of 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = ncbi::blast::SSeqLoc; _Alloc = std::allocator; reference = ncbi::blast::SSeqLoc&]', declared with attribute 'nodiscard' [-Wunused-result] + 1997 | try { source->GetNextSeqLocBatch(scope).front(); } + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ +/usr/include/c++/14/bits/stl_vector.h:1211:7: note: declared here + 1211 | front() _GLIBCXX_NOEXCEPT + | ^~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie delta_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o delta_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/delta_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie magicblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o magicblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/magicblast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psiblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie uniform_search_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o uniform_search_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/uniform_search_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o redoalignment_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/redoalignment_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie version_reference_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o version_reference_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/version_reference_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp -o seqalignfilter_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp -o blastfmtutil_unit_test.o @@ -24611,17 +24738,52 @@ /bin/ln -f bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/bdbloader_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. + -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp -o blast_format_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o blast_format_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blast_format_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_format_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie bl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o bl2seq_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/bl2seq_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp: In member function 'virtual int CBlastnApp::Run()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp:148:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long long unsigned int'} and 'Int8' {aka 'long long int'} [-Wsign-compare] 148 | if (total_length < max_db_size) { @@ -24629,6 +24791,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp:159:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long long unsigned int'} and 'Int8' {aka 'long long int'} [-Wsign-compare] 159 | if (total_length > max_db_size) { | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp: In member function 'virtual int CBlastpApp::Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:148:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long long unsigned int'} and 'Int8' {aka 'long long int'} [-Wsign-compare] + 148 | if (total_length < max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:159:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long long unsigned int'} and 'Int8' {aka 'long long int'} [-Wsign-compare] + 159 | if (total_length > max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blast_formatter /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_formatter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blast_formatter @@ -24636,41 +24805,36 @@ /bin/ln -f blast_formatter /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_formatter make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. - -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp -o blast_format_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o blast_format_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blast_format_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_format_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastinput_unit_test.o blast_scope_src_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lentrez2cli -lentrez2 -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastinput_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastinput_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp: In member function 'virtual int CBlastpApp::Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:148:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long long unsigned int'} and 'Int8' {aka 'long long int'} [-Wsign-compare] - 148 | if (total_length < max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:159:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long long unsigned int'} and 'Int8' {aka 'long long int'} [-Wsign-compare] - 159 | if (total_length > max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_node.cpp -o blastn_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp -o blastn_app.o @@ -24679,17 +24843,17 @@ /bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastn make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_app.cpp: In member function 'virtual int CBlastxApp::Run()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_app.cpp:150:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long long unsigned int'} and 'Int8' {aka 'long long int'} [-Wsign-compare] 150 | if (total_length < max_db_size) { @@ -24705,17 +24869,17 @@ /bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastp make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_node.cpp -o blastx_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_app.cpp -o blastx_app.o @@ -24724,17 +24888,17 @@ /bin/ln -f blastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastx make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie deltablast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o deltablast @@ -24742,35 +24906,17 @@ /bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/deltablast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o psiblast -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_node.cpp -o rpsblast_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o @@ -24779,36 +24925,35 @@ /bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpsblast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_node.cpp -o rpstblastn_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rpstblastn_node.o rpstblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o rpstblastn -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpstblastn +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o psiblast +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp: In member function 'virtual int CTblastnApp::Run()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:143:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long long unsigned int'} and 'Int8' {aka 'long long int'} [-Wsign-compare] 143 | if (total_length < max_db_size) { @@ -24817,42 +24962,42 @@ 154 | if (total_length > max_db_size) { | ~~~~~~~~~~~~~^~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seedtop -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seedtop +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_node.cpp -o rpstblastn_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rpstblastn_node.o rpstblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o rpstblastn +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpstblastn make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_node.cpp -o tblastn_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastn_node.o tblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastn -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastn +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seedtop +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seedtop make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastdb_convert LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdb_convert LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastx_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastx @@ -24860,35 +25005,36 @@ /bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastx make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastdb_path LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdb_path LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_aliastool.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_aliastool -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_aliastool -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd app/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_node.cpp -o tblastn_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastn_node.o tblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastn +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastn +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_path /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_path.cpp -o blastdb_path.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_path.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_path @@ -24896,17 +25042,17 @@ /bin/ln -f blastdb_path /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_path make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd app/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_convert.cpp -o blastdb_convert.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_convert.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_convert @@ -24914,17 +25060,35 @@ /bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_convert make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd app/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_aliastool.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_aliastool +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_aliastool +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcmd.cpp: In member function 'virtual int CBlastDBCmdApp::Run()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcmd.cpp:1211:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1211 | if (!output_prefix.empty() && (output_prefix.back() != CFile::GetPathSeparator())) @@ -24939,17 +25103,17 @@ /bin/ln -f blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdbcheck make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd app/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeclusterdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcp.cpp -o blastdbcp.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdbcp.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lwritedb -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxconnext -lxser -lxcgi -lxhtml -lxconnect -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdbcp @@ -24957,17 +25121,21 @@ /bin/ln -f blastdbcp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdbcp make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd app/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. +make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j4 --jobserver-auth=7,8 all +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp: In member function 'void CMakeClusterDBApp::x_BuildDatabase()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp:565:10: warning: unused variable 'success' [-Wunused-variable] + 565 | bool success = m_DB->EndBuild(); + | ^~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdbcmd.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdbcmd @@ -24975,39 +25143,6 @@ /bin/ln -f blastdbcmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdbcmd make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd app/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=makeclusterdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=convert2blastmask /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie convert2blastmask.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o convert2blastmask -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f convert2blastmask /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f convert2blastmask /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/convert2blastmask -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd app/blastdb/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp: In member function 'void CMakeClusterDBApp::x_BuildDatabase()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp:565:10: warning: unused variable 'success' [-Wunused-variable] - 565 | bool success = m_DB->EndBuild(); - | ^~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp: In member function 'void CMakeProfileDBApp::x_InitRPSDbInfo(CRPS_DbInfo&, Int4, Int4)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp:768:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 768 | if (!rpsDbInfo.aux_file.is_open()) @@ -25027,35 +25162,6 @@ /bin/ln -f makeblastdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeblastdb make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd app/segmasker/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp -o makeclusterdb.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie makeclusterdb.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makeclusterdb -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeclusterdb -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. In file included from /usr/include/c++/14/list:66, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_stack.hpp:36, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:42, @@ -25079,6 +25185,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp:1831:44: note: parameter passing for argument of type 'std::__cxx11::list::const_iterator' changed in GCC 7.1 1831 | modify_freqs.insert(p_itr, (BLASTAA_SIZE-alphabet_size), 0); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp -o makeclusterdb.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie makeclusterdb.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makeclusterdb +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeclusterdb +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' In constructor 'ncbi::AutoArray::AutoArray(size_t) [with X = unsigned char; Del = ncbi::ArrayDeleter]', inlined from 'void CMakeProfileDBApp::x_RPSUpdateStatistics(CRPS_DbInfo&, ncbi::objects::CPssmWithParameters&, Int4)' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp:888:37: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:537:17: warning: argument 1 range [2147483648, 4294967295] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] @@ -25105,83 +25218,6 @@ /bin/ln -f makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeprofiledb make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp: In member function 'void blastinput::RangeInvalid_FromGreaterThanTo::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:1977:50: warning: ignoring return value of 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = ncbi::blast::SSeqLoc; _Alloc = std::allocator; reference = ncbi::blast::SSeqLoc&]', declared with attribute 'nodiscard' [-Wunused-result] - 1977 | try { source->GetNextSeqLocBatch(scope).front(); } - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ -In file included from /usr/include/c++/14/vector:66, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:44, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbicntr.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiobj.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/object_manager.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:34: -/usr/include/c++/14/bits/stl_vector.h:1211:7: note: declared here - 1211 | front() _GLIBCXX_NOEXCEPT - | ^~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp: In member function 'void blastinput::RangeInvalid_FromGreaterThanSequenceLength::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:1997:50: warning: ignoring return value of 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = ncbi::blast::SSeqLoc; _Alloc = std::allocator; reference = ncbi::blast::SSeqLoc&]', declared with attribute 'nodiscard' [-Wunused-result] - 1997 | try { source->GetNextSeqLocBatch(scope).front(); } - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ -/usr/include/c++/14/bits/stl_vector.h:1211:7: note: declared here - 1211 | front() _GLIBCXX_NOEXCEPT - | ^~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker/segmasker.cpp -o segmasker.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie segmasker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o segmasker -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/segmasker -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j3 --jobserver-auth=5,6 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j3 --jobserver-auth=7,8 all -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie bl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o bl2seq_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/bl2seq_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastinput_unit_test.o blast_scope_src_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lentrez2cli -lentrez2 -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastinput_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastinput_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[3]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' make[2]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' make[1]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds' @@ -25193,97 +25229,97 @@ debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds' dh_auto_test - cd c\+\+ && /usr/bin/make -j3 check "TESTSUITEFLAGS=-j3 --verbose" VERBOSE=1 + cd c\+\+ && /usr/bin/make -j4 check "TESTSUITEFLAGS=-j4 --verbose" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++' if test -s ""; then \ - cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build && /usr/bin/make -w -j3 --jobserver-auth=3,4 check_p RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build && /usr/bin/make -w -j4 --jobserver-auth=3,4 check_p RUN_CHECK=Y; \ else \ - cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build && /usr/bin/make -w -j3 --jobserver-auth=3,4 check_r RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build && /usr/bin/make -w -j4 --jobserver-auth=3,4 check_r RUN_CHECK=Y; \ fi make[3]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[3]: warning: -j3 forced in submake: resetting jobserver mode. +make[3]: warning: -j4 forced in submake: resetting jobserver mode. ====================================================================== make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[4]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C corelib -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +make[4]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C corelib -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "jaeger"' Warning: non-existent sub-project "jaeger" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make -C util -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C util -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C regexp -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C regexp -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. NOTE: Skipping project regexp due to unmet requirements: LocalPCRE make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/regexp TMPL=regexp -w -j3 --jobserver-auth=13,14 mark-as-disabled -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/regexp TMPL=regexp -w -j4 --jobserver-auth=13,14 mark-as-disabled +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' -/usr/bin/make -C xregexp -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C xregexp -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -/usr/bin/make -C compress -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C compress -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C bzip2 -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C bzip2 -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. NOTE: Skipping project bzip2 due to unmet requirements: LocalBZ2 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/bzip2 TMPL=bzip2 -w -j3 --jobserver-auth=15,16 mark-as-disabled -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/bzip2 TMPL=bzip2 -w -j4 --jobserver-auth=15,16 mark-as-disabled +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' -/usr/bin/make -C zlib -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C zlib -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. NOTE: Skipping project zlib due to unmet requirements: LocalZ make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/zlib TMPL=zlib -w -j3 --jobserver-auth=15,16 mark-as-disabled -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/zlib TMPL=zlib -w -j4 --jobserver-auth=15,16 mark-as-disabled +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' -/usr/bin/make -C api -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C api -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress' @@ -25291,20 +25327,20 @@ Warning: non-existent sub-project "diff" /bin/echo 'Warning: non-existent sub-project "image"' Warning: non-existent sub-project "image" -/usr/bin/make -C tables -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C tables -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -/usr/bin/make -C sequtil -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C sequtil -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/make -C bitset -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C bitset -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "demo"' @@ -25312,31 +25348,31 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/bitset' /bin/echo 'Warning: non-existent sub-project "qparse"' Warning: non-existent sub-project "qparse" -/usr/bin/make -C lmdb -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C lmdb -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. NOTE: Skipping project lmdb due to unmet requirements: LocalLMDB make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/LocalLMDB.enabled', needed by 'requirements'. Stop. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' NOTE: skipping project "lmdb" due to unmet requirements make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' -/usr/bin/make -C lmdbxx -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C lmdbxx -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdbxx' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdbxx' SKIP -- util/lmdbxx/lmdbxx_sample make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdbxx' @@ -25344,91 +25380,91 @@ Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" -/usr/bin/make -C profile -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C profile -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -/usr/bin/make -C connect -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C connect -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C services -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C services -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make -C ext -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C ext -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -C cgi -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C cgi -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make -C html -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C html -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -/usr/bin/make -C build-system -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C build-system -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C helpers -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C helpers -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/helpers' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/helpers' SKIP -- build-system/helpers/run_with_lock make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/helpers' -/usr/bin/make -C project_tree_builder -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C project_tree_builder -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder' SKIP -- build-system/project_tree_builder/project_tree_builder -/usr/bin/make -C msbuild -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C msbuild -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. NOTE: Skipping project msbuild due to unmet requirements: MSWin make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -w -j3 --jobserver-auth=15,16 mark-as-disabled -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -w -j4 --jobserver-auth=15,16 mark-as-disabled +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system' -/usr/bin/make -C serial -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C serial -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C datatool -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C datatool -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' TEST -- serial/datatool/datatool make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' @@ -25436,18 +25472,18 @@ Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "soap"' Warning: non-existent sub-project "soap" -/usr/bin/make -C grpc_integration -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C grpc_integration -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/grpc_integration' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/make -C db -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C db -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C sqlite -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C sqlite -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' /bin/echo 'Warning: non-existent sub-project "bdb"' @@ -25455,362 +25491,362 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db' /bin/echo 'Warning: non-existent sub-project "dbapi"' Warning: non-existent sub-project "dbapi" -/usr/bin/make -C objects -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C objects -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C general -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C general -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -/usr/bin/make -C biblio -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C biblio -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -/usr/bin/make -C medline -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C medline -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -/usr/bin/make -C pub -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C pub -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -/usr/bin/make -C seqcode -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seqcode -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -/usr/bin/make -C seq -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seq -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -/usr/bin/make -C seqset -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seqset -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -/usr/bin/make -C submit -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C submit -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -/usr/bin/make -C seqedit -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seqedit -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/make -C seqsplit -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seqsplit -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -/usr/bin/make -C id1 -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C id1 -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/make -C id2 -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C id2 -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make -C entrez2 -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C entrez2 -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -C pubmed -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C pubmed -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -/usr/bin/make -C medlars -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C medlars -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -/usr/bin/make -C mla -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C mla -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -C proj -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C proj -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/proj' -/usr/bin/make -C scoremat -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C scoremat -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -/usr/bin/make -C blast -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blast -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make -C blastdb -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blastdb -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -/usr/bin/make -C blastxml -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blastxml -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -/usr/bin/make -C blastxml2 -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blastxml2 -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/make -C mmdb -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C mmdb -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mmdb' -/usr/bin/make -C cn3d -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C cn3d -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/cn3d' -/usr/bin/make -C cdd -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C cdd -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/cdd' -/usr/bin/make -C ncbimime -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C ncbimime -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/ncbimime' -/usr/bin/make -C pcsubstance -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C pcsubstance -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pcsubstance' -/usr/bin/make -C pcassay -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C pcassay -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pcassay' -/usr/bin/make -C pcassay2 -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C pcassay2 -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pcassay2' -/usr/bin/make -C gbseq -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C gbseq -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -/usr/bin/make -C insdseq -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C insdseq -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/insdseq' -/usr/bin/make -C tinyseq -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C tinyseq -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/tinyseq' -/usr/bin/make -C biotree -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C biotree -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biotree' -/usr/bin/make -C entrezgene -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C entrezgene -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrezgene' -/usr/bin/make -C omssa -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C omssa -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/omssa' -/usr/bin/make -C remap -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C remap -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/remap' -/usr/bin/make -C seqtest -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seqtest -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqtest' -/usr/bin/make -C taxon1 -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C taxon1 -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -/usr/bin/make -C taxon3 -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C taxon3 -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -/usr/bin/make -C gbproj -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C gbproj -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbproj' -/usr/bin/make -C trackmgr -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C trackmgr -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/trackmgr' -/usr/bin/make -C valerr -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C valerr -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valerr' -/usr/bin/make -C valid -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C valid -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -/usr/bin/make -C access -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C access -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/access' -/usr/bin/make -C docsum -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C docsum -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/docsum' -/usr/bin/make -C featdef -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C featdef -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/featdef' -/usr/bin/make -C genomecoll -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C genomecoll -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C gc_cli -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C gc_cli -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll/gc_cli' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll/gc_cli' TEST -- objects/genomecoll/gc_cli/gc_cli make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll/gc_cli' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make -C homologene -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C homologene -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/homologene' -/usr/bin/make -C mim -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C mim -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mim' -/usr/bin/make -C objprt -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C objprt -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/objprt' -/usr/bin/make -C variation -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C variation -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -/usr/bin/make -C macro -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C macro -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/macro' -/usr/bin/make -C genesbyloc -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C genesbyloc -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genesbyloc' -/usr/bin/make -C coords -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C coords -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/coords' -/usr/bin/make -C varrep -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C varrep -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/varrep' -/usr/bin/make -C variation_libs -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C variation_libs -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C dbsnp -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C dbsnp -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C search_by_rsid -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C search_by_rsid -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp/search_by_rsid' -/usr/bin/make -C tooltip_service -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C tooltip_service -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp/tooltip_service' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs' -/usr/bin/make -C dbsnp -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C dbsnp -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C primary_track -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C primary_track -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/dbsnp' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/dbsnp/primary_track' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/dbsnp' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -/usr/bin/make -C objmgr -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C objmgr -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" -/usr/bin/make -C util -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C util -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -/usr/bin/make -C split -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C split -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -/usr/bin/make -C objtools -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C objtools -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C logging -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C logging -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' /bin/echo 'Warning: non-existent sub-project "unit_test_util"' Warning: non-existent sub-project "unit_test_util" -/usr/bin/make -C readers -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C readers -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "app"' Warning: non-existent sub-project "app" /bin/echo 'Warning: non-existent sub-project "test"' @@ -25818,91 +25854,91 @@ /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -/usr/bin/make -C blast -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blast -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C seqdb_reader -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C seqdb_reader -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C demo -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' TEST -- objtools/blast/seqdb_reader/demo/tax4blast make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -C test -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C test -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' TEST -- objtools/blast/seqdb_reader/test/seqdb_perf make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/make -C seqdb_writer -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C seqdb_writer -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C unit_test -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' TEST -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' TEST -- objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -/usr/bin/make -C gene_info_reader -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C gene_info_reader -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C demo -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -/usr/bin/make -C unit_test -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C unit_test -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' TEST -- objtools/blast/gene_info_reader/unit_test/gene_info_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' /bin/echo 'Warning: non-existent sub-project "gene_info_writer"' Warning: non-existent sub-project "gene_info_writer" -/usr/bin/make -C services -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C services -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C unit_test -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' SKIP -- objtools/blast/services/unit_test/blast_services_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -/usr/bin/make -C blastdb_format -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C blastdb_format -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C unit_test -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' TEST -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' @@ -25910,19 +25946,19 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C pubseq_gateway -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C pubseq_gateway -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "cassandra"' Warning: non-existent sub-project "cassandra" -/usr/bin/make -C client -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C client -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C test -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client/test' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client/test' TEST -- objtools/pubseq_gateway/client/test/test_psg_client_impl make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client/test' @@ -25934,34 +25970,34 @@ /bin/echo 'Warning: non-existent sub-project "ipg"' Warning: non-existent sub-project "ipg" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway' -/usr/bin/make -C data_loaders -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C data_loaders -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C genbank -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C genbank -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C cache -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C cache -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' /bin/echo 'Warning: non-existent sub-project "pubseq"' Warning: non-existent sub-project "pubseq" -/usr/bin/make -C id2 -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C id2 -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/make -C id1 -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C id1 -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' /bin/echo 'Warning: non-existent sub-project "pubseq2"' Warning: non-existent sub-project "pubseq2" -/usr/bin/make -C gicache -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C gicache -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/gicache' /bin/echo 'Warning: non-existent sub-project "test"' @@ -25969,9 +26005,9 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C blastdb -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C blastdb -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' @@ -25982,14 +26018,14 @@ /bin/echo 'Warning: non-existent sub-project "cdd"' Warning: non-existent sub-project "cdd" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders' -/usr/bin/make -C simple -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C simple -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -/usr/bin/make -C alnmgr -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C alnmgr -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" /bin/echo 'Warning: non-existent sub-project "unit_test"' @@ -26001,71 +26037,71 @@ Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "manip"' Warning: non-existent sub-project "manip" -/usr/bin/make -C eutils -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C eutils -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C egquery -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C egquery -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -/usr/bin/make -C elink -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C elink -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -/usr/bin/make -C epost -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C epost -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -/usr/bin/make -C esearch -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C esearch -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -/usr/bin/make -C espell -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C espell -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -/usr/bin/make -C esummary -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C esummary -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' /bin/echo 'Warning: non-existent sub-project "linkout"' Warning: non-existent sub-project "linkout" -/usr/bin/make -C einfo -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C einfo -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -/usr/bin/make -C uilist -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C uilist -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -/usr/bin/make -C ehistory -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C ehistory -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -/usr/bin/make -C efetch -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C efetch -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -/usr/bin/make -C api -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C api -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -/usr/bin/make -C edit -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C edit -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" /bin/echo 'Warning: non-existent sub-project "pubmed_fetch"' @@ -26075,15 +26111,15 @@ /bin/echo 'Warning: non-existent sub-project "test_remote_updater"' Warning: non-existent sub-project "test_remote_updater" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -/usr/bin/make -C cleanup -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C cleanup -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make -C format -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C format -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' @@ -26095,20 +26131,20 @@ Warning: non-existent sub-project "asniotest" /bin/echo 'Warning: non-existent sub-project "align"' Warning: non-existent sub-project "align" -/usr/bin/make -C seqmasks_io -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seqmasks_io -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -/usr/bin/make -C align_format -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C align_format -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C unit_test -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' TEST -- objtools/align_format/unit_test/align_format_unit_test make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' @@ -26128,172 +26164,172 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' /bin/echo 'Warning: non-existent sub-project "ctools"' Warning: non-existent sub-project "ctools" -/usr/bin/make -C sra -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C sra -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. NOTE: Skipping project sra due to unmet requirements: VDB make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C readers -w -j3 --jobserver-auth=11,12 mark-as-disabled_r || exit 5 +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C readers -w -j4 --jobserver-auth=11,12 mark-as-disabled_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C sra -w -j3 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C sra -w -j4 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra TMPL=sraread -w -j3 --jobserver-auth=15,16 mark-as-disabled -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra TMPL=sraread -w -j4 --jobserver-auth=15,16 mark-as-disabled +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra TMPL=srareadx -w -j3 --jobserver-auth=15,16 mark-as-disabled -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra TMPL=srareadx -w -j4 --jobserver-auth=15,16 mark-as-disabled +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -/usr/bin/make -C bam -w -j3 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 +/usr/bin/make -C bam -w -j4 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/bam' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/bam' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/bam' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/bam' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/bam TMPL=bamread -w -j3 --jobserver-auth=15,16 mark-as-disabled -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/bam TMPL=bamread -w -j4 --jobserver-auth=15,16 mark-as-disabled +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/bam' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/bam' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/bam' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers' -/usr/bin/make -C data_loaders -w -j3 --jobserver-auth=11,12 mark-as-disabled_r || exit 5 +/usr/bin/make -C data_loaders -w -j4 --jobserver-auth=11,12 mark-as-disabled_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C sra -w -j3 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C sra -w -j4 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/VDB.enabled', needed by 'requirements'. Stop. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra' NOTE: skipping project "ncbi_xloader_sra" due to unmet requirements make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra' -/usr/bin/make -C test -w -j3 --jobserver-auth=15,16 mark-as-disabled_r || exit 5 +/usr/bin/make -C test -w -j4 --jobserver-auth=15,16 mark-as-disabled_r || exit 5 make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Nothing to be done for 'mark-as-disabled_r'. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra/test' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra' -/usr/bin/make -C bam -w -j3 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 +/usr/bin/make -C bam -w -j4 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/VDB.enabled', needed by 'requirements'. Stop. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam' NOTE: skipping project "ncbi_xloader_bam" due to unmet requirements make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam' -/usr/bin/make -C test -w -j3 --jobserver-auth=15,16 mark-as-disabled_r || exit 5 +/usr/bin/make -C test -w -j4 --jobserver-auth=15,16 mark-as-disabled_r || exit 5 make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Nothing to be done for 'mark-as-disabled_r'. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam/test' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam' -/usr/bin/make -C csra -w -j3 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 +/usr/bin/make -C csra -w -j4 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/VDB.enabled', needed by 'requirements'. Stop. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' NOTE: skipping project "ncbi_xloader_csra" due to unmet requirements make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -/usr/bin/make -C test -w -j3 --jobserver-auth=15,16 mark-as-disabled_r || exit 5 +/usr/bin/make -C test -w -j4 --jobserver-auth=15,16 mark-as-disabled_r || exit 5 make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Nothing to be done for 'mark-as-disabled_r'. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra/test' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -/usr/bin/make -C wgs -w -j3 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 +/usr/bin/make -C wgs -w -j4 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/VDB.enabled', needed by 'requirements'. Stop. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' NOTE: skipping project "ncbi_xloader_wgs" due to unmet requirements make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -/usr/bin/make -C vdbgraph -w -j3 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 +/usr/bin/make -C vdbgraph -w -j4 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/VDB.enabled', needed by 'requirements'. Stop. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph' NOTE: skipping project "ncbi_xloader_vdbgraph" due to unmet requirements make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph' -/usr/bin/make -C test -w -j3 --jobserver-auth=15,16 mark-as-disabled_r || exit 5 +/usr/bin/make -C test -w -j4 --jobserver-auth=15,16 mark-as-disabled_r || exit 5 make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Nothing to be done for 'mark-as-disabled_r'. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph/test' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph' -/usr/bin/make -C snp -w -j3 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 +/usr/bin/make -C snp -w -j4 --jobserver-auth=13,14 mark-as-disabled_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/snp' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/snp' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/snp' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/VDB.enabled', needed by 'requirements'. Stop. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/snp' NOTE: skipping project "ncbi_xloader_snp" due to unmet requirements make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/snp' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/snp' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" @@ -26303,78 +26339,78 @@ Warning: non-existent sub-project "app" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra' -/usr/bin/make -C algo -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C algo -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C dustmask -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C dustmask -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -/usr/bin/make -C winmask -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C winmask -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' /bin/echo 'Warning: non-existent sub-project "sequence"' Warning: non-existent sub-project "sequence" -/usr/bin/make -C blast -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blast -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C composition_adjustment -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C composition_adjustment -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -/usr/bin/make -C core -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C core -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -/usr/bin/make -C dbindex -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C dbindex -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C makeindex -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C makeindex -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' SKIP -- algo/blast/dbindex/makeindex/makeindex make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' /bin/echo 'Warning: non-existent sub-project "dbindex_search"' Warning: non-existent sub-project "dbindex_search" -/usr/bin/make -C api -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C api -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make -C proteinkmer -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C proteinkmer -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C unit_test -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' TEST -- algo/blast/proteinkmer/unit_test/proteinkmer_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -/usr/bin/make -C format -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C format -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -/usr/bin/make -C blastinput -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C blastinput -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C unit_test -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' TEST -- algo/blast/blastinput/unit_test/blastinput_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' @@ -26383,272 +26419,272 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' /bin/echo 'Warning: non-existent sub-project "blast_sra_input"' Warning: non-existent sub-project "blast_sra_input" -/usr/bin/make -C igblast -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C igblast -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' /bin/echo 'Warning: non-existent sub-project "gumbel_params"' Warning: non-existent sub-project "gumbel_params" -/usr/bin/make -C vdb -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C vdb -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. NOTE: Skipping project vdb due to unmet requirements: VDB make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb TMPL=vdb2blast -w -j3 --jobserver-auth=15,16 mark-as-disabled -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb TMPL=vdb2blast -w -j4 --jobserver-auth=15,16 mark-as-disabled +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -/usr/bin/make -C unit_tests -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C unit_tests -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C blast_format -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C blast_format -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' TEST -- algo/blast/unit_tests/blast_format/blast_format_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -/usr/bin/make -C blastdb -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C blastdb -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' TEST -- algo/blast/unit_tests/blastdb/bdbloader_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -/usr/bin/make -C seqdb_reader -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C seqdb_reader -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_tax4blast_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -C api -w -j3 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C api -w -j4 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blast_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/aalookup_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/seqsrc_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/delta_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/ntlookup_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/seqinfosrc_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/setupfactory_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/search_strategy_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/redoalignment_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/queryinfo_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/querydata_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/pssmenginefreqratios_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blastsetup_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blastextend_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blastdiag_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/pssmcreate_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/psiblast_iteration_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/hspfilter_besthit_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/hspfilter_culling_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/optionshandle_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/msa2pssm_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/tracebacksearch_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/traceback_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/psibl2seq_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/psiblast_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/prelimsearch_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/phiblast_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/split_query_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/scoreblk_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/hspstream_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/rps_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/gapinfo_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blasthits_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/linkhsp_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blastengine_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/subj_ranges_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/version_reference_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/ntscan_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/aascan_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/remote_blast_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/uniform_search_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blastfilter_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blastoptions_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/gencode_singleton_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/bl2seq_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/stat_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/magicblast_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/rmblast_blasthits_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j3 forced in submake: resetting jobserver mode. +make[9]: warning: -j4 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/rmblast_traceback_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' -/usr/bin/make -C segmask -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C segmask -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' /bin/echo 'Warning: non-existent sub-project "align"' @@ -26674,21 +26710,21 @@ /bin/echo 'Warning: non-existent sub-project "id_mapper"' Warning: non-existent sub-project "id_mapper" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo' -/usr/bin/make -C misc -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C misc -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C third_party -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C third_party -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/third_party' -/usr/bin/make -C third_party_static -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C third_party_static -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. NOTE: Skipping project third_party_static due to unmet requirements: -DLL make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/third_party_static' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'mark-as-disabled_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/third_party_static' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/third_party_static' @@ -26710,14 +26746,14 @@ Warning: non-existent sub-project "hgvs" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" -/usr/bin/make -C jsonwrapp -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C jsonwrapp -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -w -j3 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j4 forced in submake: resetting jobserver mode. +/usr/bin/make -C test -w -j4 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/jsonwrapp' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/jsonwrapp/test' -make[8]: warning: -j3 forced in submake: resetting jobserver mode. +make[8]: warning: -j4 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/jsonwrapp/test' TEST -- misc/jsonwrapp/test/test_jsonwrapp make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/jsonwrapp/test' @@ -26735,9 +26771,9 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc' /bin/echo 'Warning: non-existent sub-project "gui"' Warning: non-existent sub-project "gui" -/usr/bin/make -C app -w -j3 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C app -w -j4 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -make[5]: warning: -j3 forced in submake: resetting jobserver mode. +make[5]: warning: -j4 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "asn2asn"' Warning: non-existent sub-project "asn2asn" /bin/echo 'Warning: non-existent sub-project "asn2fasta"' @@ -26752,51 +26788,51 @@ Warning: non-existent sub-project "asn_cleanup" /bin/echo 'Warning: non-existent sub-project "id1_fetch"' Warning: non-existent sub-project "id1_fetch" -/usr/bin/make -C blast -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blast -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/blastp make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/blastn make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/blastx make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/tblastn make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/tblastx make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/psiblast make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/rpsblast make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/rpstblastn make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/blast_formatter make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/deltablast make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/seedtop make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' @@ -26816,81 +26852,81 @@ Warning: non-existent sub-project "netstorage" /bin/echo 'Warning: non-existent sub-project "igblast"' Warning: non-existent sub-project "igblast" -/usr/bin/make -C winmasker -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C winmasker -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' SKIP -- app/winmasker/winmasker make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/make -C dustmasker -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C dustmasker -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' SKIP -- app/dustmasker/dustmasker make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -/usr/bin/make -C segmasker -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C segmasker -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' SKIP -- app/segmasker/segmasker make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -/usr/bin/make -C blastdb -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blastdb -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdbcmd make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/makeblastdb make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdb_aliastool make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdbcheck make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/convert2blastmask make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdbcp make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/makeprofiledb make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdb_convert make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdb_path make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/makeclusterdb make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -C blastvdb -w -j3 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blastvdb -w -j4 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app' -make[6]: warning: -j3 forced in submake: resetting jobserver mode. +make[6]: warning: -j4 forced in submake: resetting jobserver mode. NOTE: Skipping project blastvdb due to unmet requirements: VDB make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[7]: warning: -j3 forced in submake: resetting jobserver mode. +make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'mark-as-disabled_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' @@ -26992,8 +27028,8 @@ Testing, please wait... -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/check.sh: 331: ulimit: error setting limit (Operation not permitted) -OK -- [serial/datatool] datatool.sh (real 0.68, user 0.42, sys 0.18) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/check.sh: line 331: ulimit: core file size: cannot modify limit: Operation not permitted +OK -- [serial/datatool] datatool.sh (real 3.03, user 0.91, sys 0.43) SKP -- [serial/datatool] datatool_xml.sh ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM_BY_SEQ @@ -27012,17 +27048,17 @@ DIS -- [objtools/blast/seqdb_reader/test] get_blastdb_metadata DIS -- [objtools/blast/seqdb_writer/unit_test] writedb_unit_test DIS -- [objtools/blast/seqdb_writer/unit_test] writedb_lmdb_unit_test -OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.06, user 0.03, sys 0.01) +OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.34, user 0.07, sys 0.04) DIS -- [objtools/blast/blastdb_format/unit_test] blastdb_format_unit_test ABS -- [objtools/pubseq_gateway/client/test] test_psg_client_impl DIS -- [objtools/align_format/unit_test] align_format_unit_test -OK -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 18.55, user 8.69, sys 5.07) +OK -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 45.23, user 19.24, sys 8.72) DIS -- [algo/blast/blastinput/unit_test] blastinput_unit_test DIS -- [algo/blast/unit_tests/blast_format] blast_format_unit_test DIS -- [algo/blast/unit_tests/blastdb] bdbloader_unit_test DIS -- [algo/blast/unit_tests/seqdb_reader] seqdb_unit_test DIS -- [algo/blast/unit_tests/seqdb_reader] seqdb_lmdb_unit_test -OK -- [algo/blast/unit_tests/seqdb_reader] seqdb_tax4blast_unit_test (real 0.11, user 0.07, sys 0.02) +OK -- [algo/blast/unit_tests/seqdb_reader] seqdb_tax4blast_unit_test (real 0.56, user 0.14, sys 0.06) DIS -- [algo/blast/unit_tests/api] blast_unit_test DIS -- [algo/blast/unit_tests/api] aalookup_unit_test DIS -- [algo/blast/unit_tests/api] seqsrc_unit_test @@ -27037,7 +27073,7 @@ DIS -- [algo/blast/unit_tests/api] pssmenginefreqratios_unit_test DIS -- [algo/blast/unit_tests/api] blastsetup_unit_test DIS -- [algo/blast/unit_tests/api] blastextend_unit_test -OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.10, user 0.07, sys 0.03) +OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.50, user 0.13, sys 0.06) DIS -- [algo/blast/unit_tests/api] pssmcreate_unit_test DIS -- [algo/blast/unit_tests/api] psiblast_iteration_unit_test DIS -- [algo/blast/unit_tests/api] hspfilter_besthit_unit_test @@ -27061,7 +27097,7 @@ DIS -- [algo/blast/unit_tests/api] subj_ranges_unit_test DIS -- [algo/blast/unit_tests/api] version_reference_unit_test DIS -- [algo/blast/unit_tests/api] ntscan_unit_test -TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 200.22, user 0.23, sys 0.13) +TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 201.46, user 0.53, sys 0.18) DIS -- [algo/blast/unit_tests/api] remote_blast_unit_test DIS -- [algo/blast/unit_tests/api] uniform_search_unit_test DIS -- [algo/blast/unit_tests/api] blastfilter_unit_test @@ -27086,120 +27122,127 @@ make[2]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++' c++/BUILD/build/check.sh concat_err cat c++/BUILD/build/check.sh.out_err -TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 200.22, user 0.23, sys 0.13) +TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 201.46, user 0.53, sys 0.18) ====================================================================== aascan_unit_test ====================================================================== -30589/000/0000/PB 4856777D72D1AC01 0001/0001 2024-11-07T19:53:36.634807 virt64c UNK_CLIENT UNK_SESSION aascan_unit_test start /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test -30589/000/0000/PB 4856777D72D1AC01 0002/0002 2024-11-07T19:53:36.635440 virt64c UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_app_username=pbuilder1&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.16.0%2Bds/c%2B%2B/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test&ncbi_app_build_date=Aug++7+2024+01:45:09&ncbi_app_package_name=blast&ncbi_app_package_version=2.16.0&ncbi_app_package_date=Aug++7+2024+01:45:09&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 +17737/000/0000/PB AF28454972D81DD1 0001/0001 2024-11-08T03:13:33.332051 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test start /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test +17737/000/0000/PB AF28454972D81DD1 0002/0002 2024-11-08T03:13:33.332880 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_app_username=pbuilder2&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.16.0%2Bds/c%2B%2B/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test&ncbi_app_build_date=Aug++7+2024+01:45:09&ncbi_app_package_name=blast&ncbi_app_package_version=2.16.0&ncbi_app_package_date=Aug++7+2024+01:45:09&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 Running 7 test cases... -30589/000/0001/RB 4856777D72D1AC01 0003/0003 2024-11-07T19:53:36.642622 virt64c UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanOffsetTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 -30589/000/0001/R 4856777D72D1AC01 0004/0004 2024-11-07T19:53:36.647201 virt64c UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=4856777D72D1AC010000000000010001 -30589/000/0001/R 4856777D72D1AC01 0005/0005 2024-11-07T19:53:36.647325 virt64c UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 -30589/000/0001/R 4856777D72D1AC01 0006/0006 2024-11-07T19:53:36.651805 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=2 -30589/000/0001/R 4856777D72D1AC01 0007/0007 2024-11-07T19:53:36.652331 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#1000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -30589/000/0001/R 4856777D72D1AC01 0008/0008 2024-11-07T19:53:36.652429 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -30589/000/0001/R 4856777D72D1AC01 0009/0009 2024-11-07T19:53:36.652495 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -30589/000/0001/R 4856777D72D1AC01 0010/0010 2024-11-07T19:53:36.652558 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -30589/000/0001/R 4856777D72D1AC01 0011/0011 2024-11-07T19:53:36.652721 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -30589/000/0001/R 4856777D72D1AC01 0012/0012 2024-11-07T19:53:36.653244 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=3 -30589/000/0001/R 4856777D72D1AC01 0013/0013 2024-11-07T19:53:36.654199 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=4 -30589/000/0001/R 4856777D72D1AC01 0014/0014 2024-11-07T19:53:36.654545 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#2000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -30589/000/0001/R 4856777D72D1AC01 0015/0015 2024-11-07T19:53:36.654615 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -30589/000/0001/R 4856777D72D1AC01 0016/0016 2024-11-07T19:53:36.654706 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -30589/000/0001/R 4856777D72D1AC01 0017/0017 2024-11-07T19:53:36.654766 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -30589/000/0001/R 4856777D72D1AC01 0018/0018 2024-11-07T19:53:36.654815 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -30589/000/0001/R 4856777D72D1AC01 0019/0019 2024-11-07T19:53:36.654978 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=5 -30589/000/0001/R 4856777D72D1AC01 0020/0020 2024-11-07T19:53:37.656178 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=6 -30589/000/0001/R 4856777D72D1AC01 0021/0021 2024-11-07T19:53:37.656931 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#3000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -30589/000/0001/R 4856777D72D1AC01 0022/0022 2024-11-07T19:53:37.657018 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -30589/000/0001/R 4856777D72D1AC01 0023/0023 2024-11-07T19:53:37.657088 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -30589/000/0001/R 4856777D72D1AC01 0024/0024 2024-11-07T19:53:37.657161 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -30589/000/0001/R 4856777D72D1AC01 0025/0025 2024-11-07T19:53:37.657225 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -30589/000/0001/R 4856777D72D1AC01 0026/0026 2024-11-07T19:53:37.657474 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=7 -30589/000/0001/R 4856777D72D1AC01 0027/0027 2024-11-07T19:53:40.159636 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=8 -30589/000/0001/R 4856777D72D1AC01 0028/0028 2024-11-07T19:53:40.160098 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#4000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -30589/000/0001/R 4856777D72D1AC01 0029/0029 2024-11-07T19:53:40.160177 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -30589/000/0001/R 4856777D72D1AC01 0030/0030 2024-11-07T19:53:40.160279 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -30589/000/0001/R 4856777D72D1AC01 0031/0031 2024-11-07T19:53:40.160344 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -30589/000/0001/R 4856777D72D1AC01 0032/0032 2024-11-07T19:53:40.160398 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -30589/000/0001/R 4856777D72D1AC01 0033/0033 2024-11-07T19:53:40.160637 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=9 -30589/000/0001/R 4856777D72D1AC01 0034/0034 2024-11-07T19:53:44.911872 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=10 -30589/000/0001/R 4856777D72D1AC01 0035/0035 2024-11-07T19:53:44.912396 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#5000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -30589/000/0001/R 4856777D72D1AC01 0036/0036 2024-11-07T19:53:44.912481 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -30589/000/0001/R 4856777D72D1AC01 0037/0037 2024-11-07T19:53:44.912548 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -30589/000/0001/R 4856777D72D1AC01 0038/0038 2024-11-07T19:53:44.912619 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -30589/000/0001/R 4856777D72D1AC01 0039/0039 2024-11-07T19:53:44.912687 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -30589/000/0001/R 4856777D72D1AC01 0040/0040 2024-11-07T19:53:44.917366 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=11 -30589/000/0001/R 4856777D72D1AC01 0041/0041 2024-11-07T19:53:53.043543 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=12 -30589/000/0001/R 4856777D72D1AC01 0042/0042 2024-11-07T19:53:53.044022 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#6000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -30589/000/0001/R 4856777D72D1AC01 0043/0043 2024-11-07T19:53:53.044099 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -30589/000/0001/R 4856777D72D1AC01 0044/0044 2024-11-07T19:53:53.044154 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -30589/000/0001/R 4856777D72D1AC01 0045/0045 2024-11-07T19:53:53.044248 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -30589/000/0001/R 4856777D72D1AC01 0046/0046 2024-11-07T19:53:53.044322 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -30589/000/0001/R 4856777D72D1AC01 0047/0047 2024-11-07T19:53:53.044593 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=13 -30589/000/0001/R 4856777D72D1AC01 0048/0048 2024-11-07T19:54:06.233395 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=14 -30589/000/0001/R 4856777D72D1AC01 0049/0049 2024-11-07T19:54:06.234017 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#7000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -30589/000/0001/R 4856777D72D1AC01 0050/0050 2024-11-07T19:54:06.234119 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -30589/000/0001/R 4856777D72D1AC01 0051/0051 2024-11-07T19:54:06.234197 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -30589/000/0001/R 4856777D72D1AC01 0052/0052 2024-11-07T19:54:06.234271 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -30589/000/0001/R 4856777D72D1AC01 0053/0053 2024-11-07T19:54:06.234342 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -30589/000/0001/R 4856777D72D1AC01 0054/0054 2024-11-07T19:54:06.234627 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=15 -30589/000/0001/R 4856777D72D1AC01 0055/0055 2024-11-07T19:54:27.017090 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=16 -30589/000/0001/R 4856777D72D1AC01 0056/0056 2024-11-07T19:54:27.017649 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#8000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -30589/000/0001/R 4856777D72D1AC01 0057/0057 2024-11-07T19:54:27.017733 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -30589/000/0001/R 4856777D72D1AC01 0058/0058 2024-11-07T19:54:27.017788 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -30589/000/0001/R 4856777D72D1AC01 0059/0059 2024-11-07T19:54:27.017968 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -30589/000/0001/R 4856777D72D1AC01 0060/0060 2024-11-07T19:54:27.018036 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -30589/000/0001/R 4856777D72D1AC01 0061/0061 2024-11-07T19:54:27.018299 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=17 -30589/000/0001/R 4856777D72D1AC01 0062/0062 2024-11-07T19:54:57.019531 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=18 -30589/000/0001/R 4856777D72D1AC01 0063/0063 2024-11-07T19:54:57.020170 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#9000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -30589/000/0001/R 4856777D72D1AC01 0064/0064 2024-11-07T19:54:57.020394 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -30589/000/0001/R 4856777D72D1AC01 0065/0065 2024-11-07T19:54:57.020479 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -30589/000/0001/R 4856777D72D1AC01 0066/0066 2024-11-07T19:54:57.020551 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -30589/000/0001/R 4856777D72D1AC01 0067/0067 2024-11-07T19:54:57.020619 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -30589/000/0001/R 4856777D72D1AC01 0068/0068 2024-11-07T19:54:57.020899 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=19 -30589/000/0001/R 4856777D72D1AC01 0069/0069 2024-11-07T19:55:27.022195 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test extra issued_subhit=20 -30589/000/0001/R 4856777D72D1AC01 0070/0070 2024-11-07T19:55:27.022708 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#10000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -30589/000/0001/R 4856777D72D1AC01 0071/0071 2024-11-07T19:55:27.022784 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -30589/000/0001/R 4856777D72D1AC01 0072/0072 2024-11-07T19:55:27.022838 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -30589/000/0001/R 4856777D72D1AC01 0073/0073 2024-11-07T19:55:27.022884 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -30589/000/0001/R 4856777D72D1AC01 0074/0074 2024-11-07T19:55:27.022964 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -30589/000/0001/RE 4856777D72D1AC01 0075/0075 2024-11-07T19:55:27.024210 virt64c UNK_CLIENT 4856777D72D1AC01_0001SID aascan_unit_test request-stop 500 110.381582021 0 0 +17737/000/0001/RB AF28454972D81DD1 0003/0003 2024-11-08T03:13:33.347639 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanOffsetTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 +17737/000/0001/R AF28454972D81DD1 0004/0004 2024-11-08T03:13:33.360433 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=AF28454972D81DD10000000000010001 +17737/000/0001/R AF28454972D81DD1 0005/0005 2024-11-08T03:13:33.360617 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 +17737/000/0001/R AF28454972D81DD1 0006/0006 2024-11-08T03:13:33.377028 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=2 +17737/000/0001/R AF28454972D81DD1 0007/0007 2024-11-08T03:13:33.377871 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#1000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0001/R AF28454972D81DD1 0008/0008 2024-11-08T03:13:33.378020 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0001/R AF28454972D81DD1 0009/0009 2024-11-08T03:13:33.378114 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0001/R AF28454972D81DD1 0010/0010 2024-11-08T03:13:33.378197 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0001/R AF28454972D81DD1 0011/0011 2024-11-08T03:13:33.378432 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0001/R AF28454972D81DD1 0012/0012 2024-11-08T03:13:33.380663 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=3 +17737/000/0001/R AF28454972D81DD1 0013/0013 2024-11-08T03:13:33.382194 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=4 +17737/000/0001/R AF28454972D81DD1 0014/0014 2024-11-08T03:13:33.382691 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#2000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0001/R AF28454972D81DD1 0015/0015 2024-11-08T03:13:33.382798 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0001/R AF28454972D81DD1 0016/0016 2024-11-08T03:13:33.382925 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0001/R AF28454972D81DD1 0017/0017 2024-11-08T03:13:33.383006 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0001/R AF28454972D81DD1 0018/0018 2024-11-08T03:13:33.383084 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0001/R AF28454972D81DD1 0019/0019 2024-11-08T03:13:33.383361 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=5 +17737/000/0001/R AF28454972D81DD1 0020/0020 2024-11-08T03:13:34.387231 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=6 +17737/000/0001/R AF28454972D81DD1 0021/0021 2024-11-08T03:13:34.387830 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#3000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0001/R AF28454972D81DD1 0022/0022 2024-11-08T03:13:34.387964 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0001/R AF28454972D81DD1 0023/0023 2024-11-08T03:13:34.388075 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0001/R AF28454972D81DD1 0024/0024 2024-11-08T03:13:34.388186 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0001/R AF28454972D81DD1 0025/0025 2024-11-08T03:13:34.388274 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0001/R AF28454972D81DD1 0026/0026 2024-11-08T03:13:34.388594 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=7 +17737/000/0001/R AF28454972D81DD1 0027/0027 2024-11-08T03:13:36.903227 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=8 +17737/000/0001/R AF28454972D81DD1 0028/0028 2024-11-08T03:13:36.903797 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#4000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0001/R AF28454972D81DD1 0029/0029 2024-11-08T03:13:36.903929 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0001/R AF28454972D81DD1 0030/0030 2024-11-08T03:13:36.904075 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0001/R AF28454972D81DD1 0031/0031 2024-11-08T03:13:36.904172 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0001/R AF28454972D81DD1 0032/0032 2024-11-08T03:13:36.904260 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0001/R AF28454972D81DD1 0033/0033 2024-11-08T03:13:36.904573 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=9 +17737/000/0001/R AF28454972D81DD1 0034/0034 2024-11-08T03:13:41.659037 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=10 +17737/000/0001/R AF28454972D81DD1 0035/0035 2024-11-08T03:13:41.659561 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#5000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0001/R AF28454972D81DD1 0036/0036 2024-11-08T03:13:41.659680 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0001/R AF28454972D81DD1 0037/0037 2024-11-08T03:13:41.659775 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0001/R AF28454972D81DD1 0038/0038 2024-11-08T03:13:41.659875 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0001/R AF28454972D81DD1 0039/0039 2024-11-08T03:13:41.659953 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0001/R AF28454972D81DD1 0040/0040 2024-11-08T03:13:41.670224 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=11 +17737/000/0001/R AF28454972D81DD1 0041/0041 2024-11-08T03:13:49.799226 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=12 +17737/000/0001/R AF28454972D81DD1 0042/0042 2024-11-08T03:13:49.799803 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#6000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0001/R AF28454972D81DD1 0043/0043 2024-11-08T03:13:49.799926 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0001/R AF28454972D81DD1 0044/0044 2024-11-08T03:13:49.800066 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0001/R AF28454972D81DD1 0045/0045 2024-11-08T03:13:49.800173 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0001/R AF28454972D81DD1 0046/0046 2024-11-08T03:13:49.800261 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0001/R AF28454972D81DD1 0047/0047 2024-11-08T03:13:49.800598 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=13 +17737/000/0001/R AF28454972D81DD1 0048/0048 2024-11-08T03:14:02.991225 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=14 +17737/000/0001/R AF28454972D81DD1 0049/0049 2024-11-08T03:14:02.991823 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#7000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0001/R AF28454972D81DD1 0050/0050 2024-11-08T03:14:02.991955 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0001/R AF28454972D81DD1 0051/0051 2024-11-08T03:14:02.992057 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0001/R AF28454972D81DD1 0052/0052 2024-11-08T03:14:02.992154 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0001/R AF28454972D81DD1 0053/0053 2024-11-08T03:14:02.992244 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0001/R AF28454972D81DD1 0054/0054 2024-11-08T03:14:02.992583 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=15 +17737/000/0001/R AF28454972D81DD1 0055/0055 2024-11-08T03:14:23.779004 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=16 +17737/000/0001/R AF28454972D81DD1 0056/0056 2024-11-08T03:14:23.779506 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#8000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0001/R AF28454972D81DD1 0057/0057 2024-11-08T03:14:23.779648 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0001/R AF28454972D81DD1 0058/0058 2024-11-08T03:14:23.779738 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0001/R AF28454972D81DD1 0059/0059 2024-11-08T03:14:23.779819 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0001/R AF28454972D81DD1 0060/0060 2024-11-08T03:14:23.779924 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0001/R AF28454972D81DD1 0061/0061 2024-11-08T03:14:23.780220 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=17 +17737/000/0001/R AF28454972D81DD1 0062/0062 2024-11-08T03:14:53.783256 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=18 +17737/000/0001/R AF28454972D81DD1 0063/0063 2024-11-08T03:14:53.783857 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#9000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0001/R AF28454972D81DD1 0064/0064 2024-11-08T03:14:53.783981 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0001/R AF28454972D81DD1 0065/0065 2024-11-08T03:14:53.784079 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0001/R AF28454972D81DD1 0066/0066 2024-11-08T03:14:53.784172 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0001/R AF28454972D81DD1 0067/0067 2024-11-08T03:14:53.784260 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0001/R AF28454972D81DD1 0068/0068 2024-11-08T03:14:53.784602 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=19 +17737/000/0001/R AF28454972D81DD1 0069/0069 2024-11-08T03:15:23.787283 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test extra issued_subhit=20 +17737/000/0001/R AF28454972D81DD1 0070/0070 2024-11-08T03:15:23.787933 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#10000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0001/R AF28454972D81DD1 0071/0071 2024-11-08T03:15:23.788128 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0001/R AF28454972D81DD1 0072/0072 2024-11-08T03:15:23.788245 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0001/R AF28454972D81DD1 0073/0073 2024-11-08T03:15:23.788353 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0001/R AF28454972D81DD1 0074/0074 2024-11-08T03:15:23.788450 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0001/RE AF28454972D81DD1 0075/0075 2024-11-08T03:15:23.793931 i-capture-the-hostname UNK_CLIENT AF28454972D81DD1_0001SID aascan_unit_test request-stop 500 110.446270942 0 0 unknown location(0): fatal error: in "aascan/ScanOffsetTest": ncbi::objects::CLoaderException: NCBI C++ Exception: Error: ID2(CLoaderException::eConnectionFailed) "./c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 253: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 Error: GENBANK(CLoaderException::eConnectionFailed) "./c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp", line 1926: ncbi::objects::CId2ReaderBase::x_SendID2Packet() --- failed to send request: NULL (in GetRecords(gi|18652417)) ./c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp(251): last checkpoint: "ScanOffsetTest" fixture entry. -30589/000/0002/RB 4856777D72D1AC01 0078/0078 2024-11-07T19:55:27.025460 virt64c UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanMaxHitsTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 -30589/000/0002/R 4856777D72D1AC01 0079/0079 2024-11-07T19:55:27.025719 virt64c UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=4856777D72D1AC010000000000020002 -30589/000/0002/R 4856777D72D1AC01 0080/0080 2024-11-07T19:55:27.025774 virt64c UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 -30589/000/0002/R 4856777D72D1AC01 0081/0081 2024-11-07T19:55:57.026990 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test extra issued_subhit=2 -30589/000/0002/R 4856777D72D1AC01 0082/0082 2024-11-07T19:55:57.031147 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#11000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -30589/000/0002/R 4856777D72D1AC01 0083/0083 2024-11-07T19:55:57.031236 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -30589/000/0002/R 4856777D72D1AC01 0084/0084 2024-11-07T19:55:57.031290 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -30589/000/0002/R 4856777D72D1AC01 0085/0085 2024-11-07T19:55:57.031338 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -30589/000/0002/R 4856777D72D1AC01 0086/0086 2024-11-07T19:55:57.031382 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -30589/000/0002/R 4856777D72D1AC01 0087/0087 2024-11-07T19:55:57.031610 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test extra issued_subhit=3 -30589/000/0002/R 4856777D72D1AC01 0088/0088 2024-11-07T19:56:27.032819 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test extra issued_subhit=4 -30589/000/0002/R 4856777D72D1AC01 0089/0089 2024-11-07T19:56:27.033395 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#12000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -30589/000/0002/R 4856777D72D1AC01 0090/0090 2024-11-07T19:56:27.033524 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -30589/000/0002/R 4856777D72D1AC01 0091/0091 2024-11-07T19:56:27.033585 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=virt64c(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -30589/000/0002/R 4856777D72D1AC01 0092/0092 2024-11-07T19:56:27.033637 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -30589/000/0002/R 4856777D72D1AC01 0093/0093 2024-11-07T19:56:27.033684 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -30589/000/0002/R 4856777D72D1AC01 0094/0094 2024-11-07T19:56:27.033976 virt64c UNK_CLIENT 4856777D72D1B4D1_0002SID aascan_unit_test extra issued_subhit=5 +17737/000/0002/RB AF28454972D81DD1 0078/0078 2024-11-08T03:15:23.796037 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanMaxHitsTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 +17737/000/0002/R AF28454972D81DD1 0079/0079 2024-11-08T03:15:23.796322 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=AF28454972D81DD10000000000020002 +17737/000/0002/R AF28454972D81DD1 0080/0080 2024-11-08T03:15:23.796425 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 +17737/000/0002/R AF28454972D81DD1 0081/0081 2024-11-08T03:15:53.798824 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test extra issued_subhit=2 +17737/000/0002/R AF28454972D81DD1 0082/0082 2024-11-08T03:15:53.799297 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#11000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0002/R AF28454972D81DD1 0083/0083 2024-11-08T03:15:53.799386 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0002/R AF28454972D81DD1 0084/0084 2024-11-08T03:15:53.799459 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0002/R AF28454972D81DD1 0085/0085 2024-11-08T03:15:53.799555 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0002/R AF28454972D81DD1 0086/0086 2024-11-08T03:15:53.799620 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0002/R AF28454972D81DD1 0087/0087 2024-11-08T03:15:53.799867 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test extra issued_subhit=3 +17737/000/0002/R AF28454972D81DD1 0088/0088 2024-11-08T03:16:23.802983 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test extra issued_subhit=4 +17737/000/0002/R AF28454972D81DD1 0089/0089 2024-11-08T03:16:23.803490 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#12000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0002/R AF28454972D81DD1 0090/0090 2024-11-08T03:16:23.803601 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0002/R AF28454972D81DD1 0091/0091 2024-11-08T03:16:23.803705 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0002/R AF28454972D81DD1 0092/0092 2024-11-08T03:16:23.803798 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0002/R AF28454972D81DD1 0093/0093 2024-11-08T03:16:23.803875 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0002/R AF28454972D81DD1 0094/0094 2024-11-08T03:16:23.804159 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test extra issued_subhit=5 +17737/000/0002/R AF28454972D81DD1 0095/0095 2024-11-08T03:16:53.806988 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test extra issued_subhit=6 +17737/000/0002/R AF28454972D81DD1 0096/0096 2024-11-08T03:16:53.807503 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#13000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +17737/000/0002/R AF28454972D81DD1 0097/0097 2024-11-08T03:16:53.807614 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf] Failed to connect: Unknown +17737/000/0002/R AF28454972D81DD1 0098/0098 2024-11-08T03:16:53.807702 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=armv7l-unknown-linux-gnueabihf": Unknown +17737/000/0002/R AF28454972D81DD1 0099/0099 2024-11-08T03:16:53.807825 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +17737/000/0002/R AF28454972D81DD1 0100/0100 2024-11-08T03:16:53.807905 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +17737/000/0002/R AF28454972D81DD1 0101/0101 2024-11-08T03:16:53.808175 i-capture-the-hostname UNK_CLIENT AF28454972D82691_0002SID aascan_unit_test extra issued_subhit=7 Maximum execution time of 200 second(s) is exceeded -real 200.22 -user 0.23 -sys 0.13 -Start time : 11/07/2024 19:53:36 -Stop time : 11/07/2024 19:56:56 -Load averages: 2.13 4.61 6.29 +real 201.46 +user 0.53 +sys 0.18 +Start time : 11/08/2024 03:13:32 +Stop time : 11/08/2024 03:16:54 +Load averages: 26.35 27.96 29.96 @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@@ EXIT CODE: 143 @@ -27369,43 +27412,43 @@ diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/tblastx contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastx contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/makembindex contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/windowmasker contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdb_path contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdb_aliastool contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/makeprofiledb contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/tblastn contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/psiblast contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdbcheck contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blast_formatter contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/tblastx contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastn contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdb_convert contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdbcmd contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/rpstblastn contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdbcp contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/dustmasker contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/gene_info_reader contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/segmasker contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/tax4blast contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdb_path contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/deltablast contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/psiblast contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/rpsblast+ contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/tax4blast contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/seqdb_perf contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/makeblastdb contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/gene_info_reader contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/dustmasker contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/rpstblastn contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/makeprofiledb contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdb_aliastool contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/makeclusterdb contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/convert2blastmask contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/seedtop+ contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/windowmasker contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastn contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/makeblastdb contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/seqdb_perf contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastp contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin -dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/segmasker contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdb_convert contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blast_formatter contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdbcp contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/seedtop+ contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdbcheck contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/blastdbcmd contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin +dpkg-shlibdeps: warning: debian/ncbi-blast+/usr/bin/makembindex contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcleanup.so was not linked against libefetch.so (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcleanup.so was not linked against libpubmed.so (it uses none of the library's symbols) dh_installdeb -O--sourcedirectory=c\+\+ -O--with-autoreconf dh_gencontrol -O--sourcedirectory=c\+\+ -O--with-autoreconf dh_md5sums -O--sourcedirectory=c\+\+ -O--with-autoreconf dh_builddeb -O--sourcedirectory=c\+\+ -O--with-autoreconf -dpkg-deb: building package 'ncbi-blast+-legacy' in '../ncbi-blast+-legacy_2.16.0+ds-6_all.deb'. -dpkg-deb: building package 'ncbi-blast+-dbgsym' in '../ncbi-blast+-dbgsym_2.16.0+ds-6_armhf.deb'. dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.16.0+ds-6_armhf.deb'. +dpkg-deb: building package 'ncbi-blast+-dbgsym' in '../ncbi-blast+-dbgsym_2.16.0+ds-6_armhf.deb'. +dpkg-deb: building package 'ncbi-blast+-legacy' in '../ncbi-blast+-legacy_2.16.0+ds-6_all.deb'. dpkg-genbuildinfo --build=binary -O../ncbi-blast+_2.16.0+ds-6_armhf.buildinfo dpkg-genchanges --build=binary -O../ncbi-blast+_2.16.0+ds-6_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -27414,12 +27457,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/12340/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/12340/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/22436 and its subdirectories -I: Current time: Thu Nov 7 08:06:57 -12 2024 -I: pbuilder-time-stamp: 1731010017 +I: removing directory /srv/workspace/pbuilder/12340 and its subdirectories +I: Current time: Fri Nov 8 17:53:12 +14 2024 +I: pbuilder-time-stamp: 1731037992