Diff of the two buildlogs: -- --- b1/build.log 2024-12-25 22:19:14.780691703 +0000 +++ b2/build.log 2024-12-25 22:37:23.243196880 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Dec 25 09:57:39 -12 2024 -I: pbuilder-time-stamp: 1735163859 +I: Current time: Thu Dec 26 12:20:15 +14 2024 +I: pbuilder-time-stamp: 1735165215 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -31,52 +31,84 @@ dpkg-source: info: applying 30_reproducible_builds_02.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/7910/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/12934/tmp/hooks/D01_modify_environment starting +debug: Running on virt32b. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 25 22:20 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/12934/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/12934/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='c603dd25169e4eb48df3788ec5bf7ec2' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='7910' - PS1='# ' - PS2='> ' + INVOCATION_ID=4661f9ca775342e5b36fd9d467af2556 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=12934 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.hNfzztuG/pbuilderrc_ioGQ --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.hNfzztuG/b1 --logfile b1/build.log liggghts_3.8.0+repack1-12.dsc' - SUDO_GID='114' - SUDO_UID='108' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.hNfzztuG/pbuilderrc_9SJM --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.hNfzztuG/b2 --logfile b2/build.log liggghts_3.8.0+repack1-12.dsc' + SUDO_GID=112 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt64a 6.1.0-28-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-armmp-lpae #1 SMP Debian 6.1.119-1 (2024-11-22) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/7910/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/12934/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -680,7 +712,7 @@ Get: 552 http://deb.debian.org/debian trixie/main armhf tk-dev armhf 8.6.14 [3896 B] Get: 553 http://deb.debian.org/debian trixie/main armhf vtk9 armhf 9.3.0+dfsg1-1.1+b2 [19.0 kB] Get: 554 http://deb.debian.org/debian trixie/main armhf libvtk9-dev armhf 9.3.0+dfsg1-1.1+b2 [3052 kB] -Fetched 430 MB in 16s (26.9 MB/s) +Fetched 430 MB in 8s (50.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19681 files and directories currently installed.) @@ -2473,8 +2505,8 @@ Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Wed Dec 25 22:03:31 UTC 2024. -Universal Time is now: Wed Dec 25 22:03:31 UTC 2024. +Local time is now: Wed Dec 25 22:23:09 UTC 2024. +Universal Time is now: Wed Dec 25 22:23:09 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:armhf (1.17.0-2+b1) ... @@ -3154,7 +3186,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../liggghts_3.8.0+repack1-12_source.changes +I: user script /srv/workspace/pbuilder/12934/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/12934/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../liggghts_3.8.0+repack1-12_source.changes dpkg-buildpackage: info: source package liggghts dpkg-buildpackage: info: source version 3.8.0+repack1-12 dpkg-buildpackage: info: source distribution unstable @@ -3230,7 +3266,7 @@ -- Found JPEG: /usr/lib/arm-linux-gnueabihf/libjpeg.so (found version "62") -- Found MPI_CXX: /usr/lib/arm-linux-gnueabihf/mpich/lib/libmpichcxx.so (found version "4.1") -- Found MPI: TRUE (found version "4.1") --- Configuring done (5.0s) +-- Configuring done (5.4s) -- Generating done (0.3s) CMake Warning: Manually-specified variables were not used by the project: @@ -3242,7 +3278,7 @@ -- Build files have been written to: /build/reproducible-path/liggghts-3.8.0+repack1/debian/build dh_auto_build -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build - cd debian/build && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 + cd debian/build && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -S/build/reproducible-path/liggghts-3.8.0+repack1 -B/build/reproducible-path/liggghts-3.8.0+repack1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/CMakeFiles /build/reproducible-path/liggghts-3.8.0+repack1/debian/build//CMakeFiles/progress.marks @@ -3270,10 +3306,14 @@ make[3]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle.cpp.o [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/angle.cpp.o -MF CMakeFiles/libliggghts.dir/angle.cpp.o.d -o CMakeFiles/libliggghts.dir/angle.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle.cpp -[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_map.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/angle.cpp.o -MF CMakeFiles/libliggghts.dir/angle.cpp.o.d -o CMakeFiles/libliggghts.dir/angle.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom.cpp.o -MF CMakeFiles/libliggghts.dir/atom.cpp.o.d -o CMakeFiles/libliggghts.dir/atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_map.cpp.o -MF CMakeFiles/libliggghts.dir/atom_map.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_map.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_map.cpp +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:363:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 363 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3284,10 +3324,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:375:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 375 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_map.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_map.cpp.o -MF CMakeFiles/libliggghts.dir/atom_map.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_map.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_map.cpp -[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec.cpp [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_atomic.cpp [ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o @@ -3320,6 +3356,8 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/bond_harmonic.cpp.o -MF CMakeFiles/libliggghts.dir/bond_harmonic.cpp.o.d -o CMakeFiles/libliggghts.dir/bond_harmonic.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp [ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp +[ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o -MF CMakeFiles/libliggghts.dir/bounding_box.cpp.o.d -o CMakeFiles/libliggghts.dir/bounding_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bounding_box.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:200:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 200 | fread(&k[1],sizeof(double),atom->nbondtypes,fp); @@ -3327,10 +3365,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:201:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 201 | fread(&r0[1],sizeof(double),atom->nbondtypes,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o -MF CMakeFiles/libliggghts.dir/bounding_box.cpp.o.d -o CMakeFiles/libliggghts.dir/bounding_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bounding_box.cpp -[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -MF CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o.d -o CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:351:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 351 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3341,6 +3375,8 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:363:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 363 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -MF CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o.d -o CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling.cpp [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -MF CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o.d -o CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_file.cpp [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o @@ -3388,9 +3424,9 @@ [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate_sphere_atom.cpp [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o -MF CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate_superquadric.cpp [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_group_group.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_group_group.cpp.o -MF CMakeFiles/libliggghts.dir/compute_group_group.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_group_group.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_group_group.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o -MF CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate_superquadric.cpp [ 15%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_gyration.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_gyration.cpp.o -MF CMakeFiles/libliggghts.dir/compute_gyration.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_gyration.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_gyration.cpp [ 15%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_gyration_molecule.cpp.o @@ -3455,6 +3491,8 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dihedral.cpp.o -MF CMakeFiles/libliggghts.dir/dihedral.cpp.o.d -o CMakeFiles/libliggghts.dir/dihedral.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral.cpp [ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp +[ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/displace_atoms.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/displace_atoms.cpp.o -MF CMakeFiles/libliggghts.dir/displace_atoms.cpp.o.d -o CMakeFiles/libliggghts.dir/displace_atoms.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/displace_atoms.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:352:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 352 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3465,8 +3503,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:364:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 364 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/displace_atoms.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/displace_atoms.cpp.o -MF CMakeFiles/libliggghts.dir/displace_atoms.cpp.o.d -o CMakeFiles/libliggghts.dir/displace_atoms.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/displace_atoms.cpp [ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/domain.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/domain.cpp.o -MF CMakeFiles/libliggghts.dir/domain.cpp.o.d -o CMakeFiles/libliggghts.dir/domain.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/domain.cpp [ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/dump.cpp.o @@ -3479,6 +3515,8 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -MF CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtm.cpp +[ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_decomposition_vtk.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp: In constructor 'LAMMPS_NS::DumpCustom::DumpCustom(LAMMPS_NS::LAMMPS*, int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp:180:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 180 | columns[0] = '\0'; @@ -3486,14 +3524,14 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp:179:23: note: destination object of size 0 allocated by 'operator new []' 179 | columns = new char[n]; | ^ -[ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_decomposition_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_euler_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_image.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_image.cpp.o -MF CMakeFiles/libliggghts.dir/dump_image.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_image.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_image.cpp [ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_local.cpp.o -MF CMakeFiles/libliggghts.dir/dump_local.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_local.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local.cpp +[ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o -MF CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local_gran.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local.cpp: In constructor 'LAMMPS_NS::DumpLocal::DumpLocal(LAMMPS_NS::LAMMPS*, int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local.cpp:120:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 120 | columns[0] = '\0'; @@ -3501,8 +3539,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local.cpp:119:23: note: destination object of size 0 allocated by 'operator new []' 119 | columns = new char[n]; | ^ -[ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o -MF CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local_gran.cpp [ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local_gran_vtk.cpp [ 29%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh.cpp.o @@ -3535,14 +3571,14 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_atom.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_atom.cpp [ 33%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_correlate.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_correlate.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_correlate.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_correlate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()': -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp:520:16: warning: ignoring return value of 'int ftruncate(int, __off64_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 520 | ftruncate(fileno(fp),fileend); - | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_euler.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()': +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp:520:16: warning: ignoring return value of 'int ftruncate(int, __off64_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 520 | ftruncate(fileno(fp),fileend); + | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp:848:16: warning: ignoring return value of 'int ftruncate(int, __off64_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 848 | ftruncate(fileno(fp),fileend); @@ -3551,8 +3587,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp -[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -MF CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_aveforce.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp:670:16: warning: ignoring return value of 'int ftruncate(int, __off64_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 670 | ftruncate(fileno(fp),fileend); @@ -3561,9 +3595,11 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp:917:16: warning: ignoring return value of 'int ftruncate(int, __off64_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 917 | ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ -[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o +[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -MF CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_aveforce.cpp [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -MF CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_base_liggghts.cpp +[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -MF CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_box_relax.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o -MF CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_buoyancy.cpp @@ -3579,6 +3615,8 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o -MF CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_force.cpp [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o -MF CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_force_implicit.cpp +[ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -MF CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_gran.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp: In constructor 'LAMMPS_NS::FixCfdCouplingConvectionSpecies::FixCfdCouplingConvectionSpecies(LAMMPS_NS::LAMMPS*, int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:75:40: warning: 'Source' directive writing 6 bytes into a region of size between 1 and 128 [-Wformat-overflow=] 75 | sprintf(sourceName_, "%sSource",speciesName_); @@ -3675,12 +3713,8 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -[ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -MF CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_gran.cpp [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o -MF CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp -[ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:63:9: warning: "BIG" redefined 63 | #define BIG 1000000. | ^~~ @@ -3694,6 +3728,8 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/domain_definitions.h:60:9: note: this is the location of the previous definition 60 | #define BIG 1.0e20 | ^~~ +[ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history.cpp [ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history_mesh.cpp [ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o @@ -3813,8 +3849,8 @@ [ 57%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_rigid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_rigid.cpp.o -MF CMakeFiles/libliggghts.dir/fix_rigid.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_rigid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_rigid.cpp [ 57%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_scalar_transport_equation.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_scalar_transport_equation.cpp.o -MF CMakeFiles/libliggghts.dir/fix_scalar_transport_equation.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_scalar_transport_equation.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_scalar_transport_equation.cpp [ 57%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_setforce.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_scalar_transport_equation.cpp.o -MF CMakeFiles/libliggghts.dir/fix_scalar_transport_equation.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_scalar_transport_equation.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_scalar_transport_equation.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_setforce.cpp.o -MF CMakeFiles/libliggghts.dir/fix_setforce.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_setforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_setforce.cpp [ 58%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_sph.cpp.o -MF CMakeFiles/libliggghts.dir/fix_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_sph.cpp @@ -3886,8 +3922,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp [ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/info.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/info.cpp.o -MF CMakeFiles/libliggghts.dir/info.cpp.o.d -o CMakeFiles/libliggghts.dir/info.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp -[ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input.cpp.o -MF CMakeFiles/libliggghts.dir/input.cpp.o.d -o CMakeFiles/libliggghts.dir/input.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:340:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 340 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3898,6 +3932,12 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:352:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 352 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input.cpp.o -MF CMakeFiles/libliggghts.dir/input.cpp.o.d -o CMakeFiles/libliggghts.dir/input.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp +[ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -MF CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o.d -o CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tet.cpp +[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -MF CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o.d -o CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tri.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp: In member function 'void LAMMPS_NS::Info::command(int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp:260:18: warning: 'mallinfo mallinfo()' is deprecated [-Wdeprecated-declarations] 260 | mi = mallinfo(); @@ -3906,8 +3946,6 @@ /usr/include/malloc.h:114:24: note: declared here 114 | extern struct mallinfo mallinfo (void) __THROW __MALLOC_DEPRECATED; | ^~~~~~~~ -[ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -MF CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o.d -o CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tet.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp: In member function 'void LAMMPS_NS::Input::shell()': /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1124:10: warning: ignoring return value of 'int chdir(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1124 | chdir(arg[1]); @@ -3915,8 +3953,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1170:24: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1170 | if (me == 0) system(work); | ~~~~~~^~~~~~ -[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -MF CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o.d -o CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tri.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/input_multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_multisphere.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/integrate.cpp.o @@ -3947,15 +3983,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module_liquidtransfer.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module_stress.cpp -In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_base.h:63, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/granular_styles.h:81, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp:87: -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::SurfacesIntersectData]': -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 80 | posix_memalign(&ptr, alignment, sizeof(T)); - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::ForceData]': -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module_stress_servo.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module_stress_servo.cpp:67:9: warning: "BIG" redefined @@ -3972,6 +3999,15 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/domain_definitions.h:60:9: note: this is the location of the previous definition 60 | #define BIG 1.0e20 | ^~~ +In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_base.h:63, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/granular_styles.h:81, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp:87: +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::SurfacesIntersectData]': +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 80 | posix_memalign(&ptr, alignment, sizeof(T)); + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::ForceData]': +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_mover_linear.cpp [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o @@ -3986,14 +4022,14 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/minimize.cpp.o -MF CMakeFiles/libliggghts.dir/minimize.cpp.o.d -o CMakeFiles/libliggghts.dir/minimize.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/minimize.cpp [ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modified_andrew.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/modified_andrew.cpp.o -MF CMakeFiles/libliggghts.dir/modified_andrew.cpp.o.d -o CMakeFiles/libliggghts.dir/modified_andrew.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/modified_andrew.cpp -[ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modify.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/modify.cpp.o -MF CMakeFiles/libliggghts.dir/modify.cpp.o.d -o CMakeFiles/libliggghts.dir/modify.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp In file included from /usr/include/c++/14/algorithm:61, from /build/reproducible-path/liggghts-3.8.0+repack1/src/modified_andrew.cpp:48: /usr/include/c++/14/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/14/bits/stl_algo.h:1750:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1750 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ +[ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modify.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/modify.cpp.o -MF CMakeFiles/libliggghts.dir/modify.cpp.o.d -o CMakeFiles/libliggghts.dir/modify.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp /usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1770 | __insertion_sort(_RandomAccessIterator __first, @@ -4034,6 +4070,8 @@ | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o -MF CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o.d -o CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/modify_liggghts.cpp +[ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/multisphere.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/multisphere.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp:1197:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1197 | if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp); @@ -4074,8 +4112,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp:1264:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1264 | if (me == 0) fread(&n,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ -[ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/multisphere.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/multisphere.cpp [ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o -MF CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o.d -o CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/multisphere_parallel.cpp [ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_bond.cpp.o @@ -4112,22 +4148,12 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_gran.cpp.o -MF CMakeFiles/libliggghts.dir/pair_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o -MF CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp +[ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp: In member function 'virtual void LAMMPS_NS::PairGran::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp:763:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 763 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp: In member function 'virtual void LAMMPS_NS::PairGranProxy::read_restart_settings(FILE*, int, int)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:116:58: warning: format '%zd' expects argument of type 'signed size_t', but argument 3 has type 'int64_t' {aka 'long long int'} [-Wformat=] - 116 | fprintf(screen," original hashcode = %zd \n",selected); - | ~~^ ~~~~~~~~ - | | | - | int int64_t {aka long long int} - | %lld -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:99:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 99 | fread(&selected, sizeof(int64_t), 1, fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:660:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 660 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -4138,14 +4164,22 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:677:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 677 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -MF CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid_overlay.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp: In member function 'virtual void LAMMPS_NS::PairGranProxy::read_restart_settings(FILE*, int, int)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:116:58: warning: format '%zd' expects argument of type 'signed size_t', but argument 3 has type 'int64_t' {aka 'long long int'} [-Wformat=] + 116 | fprintf(screen," original hashcode = %zd \n",selected); + | ~~^ ~~~~~~~~ + | | | + | int int64_t {aka long long int} + | %lld +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:99:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 99 | fread(&selected, sizeof(int64_t), 1, fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -MF CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_line_lj.cpp [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_soft.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_soft.cpp.o -MF CMakeFiles/libliggghts.dir/pair_soft.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_soft.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp -[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o -MF CMakeFiles/libliggghts.dir/pair_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp:282:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 282 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); @@ -4163,6 +4197,8 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp:313:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 313 | fread(&mix_flag,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o -MF CMakeFiles/libliggghts.dir/pair_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph.cpp [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -MF CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o @@ -4200,6 +4236,8 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/read_dump.cpp.o -MF CMakeFiles/libliggghts.dir/read_dump.cpp.o.d -o CMakeFiles/libliggghts.dir/read_dump.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/read_dump.cpp [ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/read_restart.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/read_restart.cpp.o -MF CMakeFiles/libliggghts.dir/read_restart.cpp.o.d -o CMakeFiles/libliggghts.dir/read_restart.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp +[ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/reader.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/reader.cpp.o -MF CMakeFiles/libliggghts.dir/reader.cpp.o.d -o CMakeFiles/libliggghts.dir/reader.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/reader.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::nread_int(int*, int, FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp:863:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 863 | fread(buf,sizeof(int),n,fp); @@ -4231,8 +4269,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp:948:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 948 | fread(&value,sizeof(bigint),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/reader.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/reader.cpp.o -MF CMakeFiles/libliggghts.dir/reader.cpp.o.d -o CMakeFiles/libliggghts.dir/reader.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/reader.cpp [ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/reader_native.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/reader_native.cpp.o -MF CMakeFiles/libliggghts.dir/reader_native.cpp.o.d -o CMakeFiles/libliggghts.dir/reader_native.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/reader_native.cpp [ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/reader_xyz.cpp.o @@ -4311,12 +4347,12 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/update.cpp.o -MF CMakeFiles/libliggghts.dir/update.cpp.o.d -o CMakeFiles/libliggghts.dir/update.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/update.cpp [ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/variable.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/variable.cpp.o -MF CMakeFiles/libliggghts.dir/variable.cpp.o.d -o CMakeFiles/libliggghts.dir/variable.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/variable.cpp +[ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/velocity.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/velocity.cpp.o -MF CMakeFiles/libliggghts.dir/velocity.cpp.o.d -o CMakeFiles/libliggghts.dir/velocity.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/velocity.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/variable.cpp:534:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 534 | fscanf(fp,"%d",&nextindex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ -[ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/velocity.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/velocity.cpp.o -MF CMakeFiles/libliggghts.dir/velocity.cpp.o.d -o CMakeFiles/libliggghts.dir/velocity.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/velocity.cpp [ 98%] Building CXX object src/CMakeFiles/libliggghts.dir/verlet.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/verlet.cpp.o -MF CMakeFiles/libliggghts.dir/verlet.cpp.o.d -o CMakeFiles/libliggghts.dir/verlet.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/verlet.cpp [ 98%] Building CXX object src/CMakeFiles/libliggghts.dir/write_data.cpp.o @@ -4359,7 +4395,7 @@ pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% -Setting up run at Wed Dec 25 10:16:23 2024 +Setting up run at Thu Dec 26 12:34:06 2024 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps @@ -4379,14 +4415,14 @@ INFO: Particle insertion ins: inserted 890 particle templates (mass 1.908748e+00) at step 1 - a total of 890 particle templates (mass 1.908748e+00) inserted so far. 1 890 0.085963889 0 5726.2438 0.0015 -Loop time of 0.0500378 on 1 procs for 1 steps with 890 atoms, finish time Wed Dec 25 10:16:23 2024 +Loop time of 0.050853 on 1 procs for 1 steps with 890 atoms, finish time Thu Dec 26 12:34:06 2024 -Pair time (%) = 8.2932e-05 (0.165739) -Neigh time (%) = 0.00128476 (2.56758) -Comm time (%) = 9.0752e-05 (0.181367) -Outpt time (%) = 0.000164665 (0.329081) -Other time (%) = 0.0484147 (96.7562) +Pair time (%) = 8.5612e-05 (0.168352) +Neigh time (%) = 0.00151504 (2.97924) +Comm time (%) = 8.8732e-05 (0.174487) +Outpt time (%) = 0.00010777 (0.211924) +Other time (%) = 0.0490559 (96.466) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -4399,7 +4435,7 @@ Ave neighs/atom = 1.54719 Neighbor list builds = 1 Dangerous builds = 0 -Setting up run at Wed Dec 25 10:16:23 2024 +Setting up run at Thu Dec 26 12:34:06 2024 Memory usage per processor = 8.04447 Mbytes Step Atoms KinEng rke heattran Volume @@ -4424,14 +4460,14 @@ 18000 890 1.4676598e-05 7.0850812e-06 5726.2438 0.0015 19000 890 3.7770954e-06 4.6853468e-06 5726.2438 0.0015 20000 890 5.3031725e-07 1.3357401e-06 5726.2438 0.0015 -Loop time of 32.4073 on 1 procs for 19999 steps with 890 atoms, finish time Wed Dec 25 10:16:56 2024 +Loop time of 35.4682 on 1 procs for 19999 steps with 890 atoms, finish time Thu Dec 26 12:34:41 2024 -Pair time (%) = 19.7031 (60.7982) -Neigh time (%) = 0.23874 (0.736686) -Comm time (%) = 0.0434516 (0.13408) -Outpt time (%) = 0.424791 (1.31079) -Other time (%) = 11.9973 (37.0202) +Pair time (%) = 20.8894 (58.8961) +Neigh time (%) = 0.24246 (0.683599) +Comm time (%) = 0.0455339 (0.12838) +Outpt time (%) = 1.90637 (5.37488) +Other time (%) = 12.3844 (34.917) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -4446,7 +4482,7 @@ Dangerous builds = 0 Setting atom values ... 445 settings made for property/atom -Setting up run at Wed Dec 25 10:16:56 2024 +Setting up run at Thu Dec 26 12:34:41 2024 Memory usage per processor = 8.33318 Mbytes Step Atoms KinEng rke heattran Volume @@ -4481,14 +4517,14 @@ 48000 890 9.0915381e-09 2.6785102e-08 10498.114 0.0015 49000 890 8.3490816e-10 2.0441102e-08 10498.114 0.0015 50000 890 5.7112432e-09 2.069405e-08 10498.114 0.0015 -Loop time of 58.043 on 1 procs for 30000 steps with 890 atoms, finish time Wed Dec 25 10:17:54 2024 +Loop time of 63.0426 on 1 procs for 30000 steps with 890 atoms, finish time Thu Dec 26 12:35:44 2024 -Pair time (%) = 36.0226 (62.0618) -Neigh time (%) = 0.00154166 (0.00265606) -Comm time (%) = 0.0416626 (0.0717788) -Outpt time (%) = 0.67809 (1.16825) -Other time (%) = 21.2992 (36.6955) +Pair time (%) = 38.4263 (60.9529) +Neigh time (%) = 0.00179413 (0.0028459) +Comm time (%) = 0.0454189 (0.0720448) +Outpt time (%) = 2.49316 (3.95472) +Other time (%) = 22.0759 (35.0175) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -4507,7 +4543,7 @@ dh_testroot -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_prep -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_auto_install -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build - cd debian/build && make -j3 install DESTDIR=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd debian/build && make -j4 install DESTDIR=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -S/build/reproducible-path/liggghts-3.8.0+repack1 -B/build/reproducible-path/liggghts-3.8.0+repack1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -5000,10 +5036,10 @@ dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: symbol _ZN24vtkRectilinearGridWriter3NewEv used by debian/libliggghts3t64/usr/lib/arm-linux-gnueabihf/libliggghts.so.3.8.0 found in none of the libraries -dpkg-shlibdeps: warning: symbol _ZN17vtkPolyDataWriter3NewEv used by debian/libliggghts3t64/usr/lib/arm-linux-gnueabihf/libliggghts.so.3.8.0 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN25vtkUnstructuredGridWriter3NewEv used by debian/libliggghts3t64/usr/lib/arm-linux-gnueabihf/libliggghts.so.3.8.0 found in none of the libraries -dpkg-shlibdeps: warning: symbol _ZN9vtkWriter12SetInputDataEP13vtkDataObject used by debian/libliggghts3t64/usr/lib/arm-linux-gnueabihf/libliggghts.so.3.8.0 found in none of the libraries dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libliggghts3t64/usr/lib/arm-linux-gnueabihf/libliggghts.so.3.8.0 found in none of the libraries +dpkg-shlibdeps: warning: symbol _ZN9vtkWriter12SetInputDataEP13vtkDataObject used by debian/libliggghts3t64/usr/lib/arm-linux-gnueabihf/libliggghts.so.3.8.0 found in none of the libraries +dpkg-shlibdeps: warning: symbol _ZN17vtkPolyDataWriter3NewEv used by debian/libliggghts3t64/usr/lib/arm-linux-gnueabihf/libliggghts.so.3.8.0 found in none of the libraries dh_installdeb -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_gencontrol -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dpkg-gencontrol: warning: Depends field of package libliggghts-dev: substitution variable ${shlibs:Depends} used, but is not defined @@ -5023,12 +5059,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/12934/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/12934/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/7910 and its subdirectories -I: Current time: Wed Dec 25 10:19:07 -12 2024 -I: pbuilder-time-stamp: 1735165147 +I: removing directory /srv/workspace/pbuilder/12934 and its subdirectories +I: Current time: Thu Dec 26 12:37:18 +14 2024 +I: pbuilder-time-stamp: 1735166238