Diff of the two buildlogs: -- --- b1/build.log 2024-05-13 18:43:19.229931413 +0000 +++ b2/build.log 2024-05-13 18:48:08.545625818 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon May 13 06:34:37 -12 2024 -I: pbuilder-time-stamp: 1715625277 +I: Current time: Tue May 14 08:43:29 +14 2024 +I: pbuilder-time-stamp: 1715625809 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -26,52 +26,84 @@ dpkg-source: info: unpacking libbeam-java_1.3.5-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/16046/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/17398/tmp/hooks/D01_modify_environment starting +debug: Running on virt32c. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 13 18:43 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/17398/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/17398/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=5 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='86c459bdd3804c7688a475f5234d8b87' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='16046' - PS1='# ' - PS2='> ' + INVOCATION_ID=b8089681f66f41a08a6f2521de122b61 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=17398 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.QOCsDBOZ/pbuilderrc_dHbH --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.QOCsDBOZ/b1 --logfile b1/build.log libbeam-java_1.3.5-2.dsc' - SUDO_GID='114' - SUDO_UID='109' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.QOCsDBOZ/pbuilderrc_J5U2 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.QOCsDBOZ/b2 --logfile b2/build.log libbeam-java_1.3.5-2.dsc' + SUDO_GID=113 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux ff64a 6.1.0-21-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-21-armmp-lpae #1 SMP Debian 6.1.90-1 (2024-05-03) armv7l GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 12 11:42 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/16046/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 12 11:38 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/17398/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -389,7 +421,7 @@ Get: 268 http://deb.debian.org/debian trixie/main armhf maven all 3.8.7-2 [19.3 kB] Get: 269 http://deb.debian.org/debian trixie/main armhf maven-repo-helper all 1.11 [142 kB] Get: 270 http://deb.debian.org/debian trixie/main armhf maven-debian-helper all 2.6.4 [108 kB] -Fetched 244 MB in 7s (34.1 MB/s) +Fetched 244 MB in 6s (41.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sgml-base. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19445 files and directories currently installed.) @@ -1678,7 +1710,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/libbeam-java-1.3.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbeam-java_1.3.5-2_source.changes +I: user script /srv/workspace/pbuilder/17398/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/17398/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libbeam-java-1.3.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libbeam-java_1.3.5-2_source.changes dpkg-buildpackage: info: source package libbeam-java dpkg-buildpackage: info: source version 1.3.5-2 dpkg-buildpackage: info: source distribution unstable @@ -1799,15 +1835,15 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for beam 1.3.5: [INFO] -[INFO] beam ............................................... SUCCESS [ 0.013 s] -[INFO] beam-core .......................................... SUCCESS [ 57.101 s] -[INFO] beam-func .......................................... SUCCESS [ 7.783 s] -[INFO] beam-exec .......................................... SUCCESS [ 3.181 s] +[INFO] beam ............................................... SUCCESS [ 0.007 s] +[INFO] beam-core .......................................... SUCCESS [ 22.617 s] +[INFO] beam-func .......................................... SUCCESS [ 2.507 s] +[INFO] beam-exec .......................................... SUCCESS [ 0.966 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 01:09 min -[INFO] Finished at: 2024-05-13T18:40:40Z +[INFO] Total time: 26.562 s +[INFO] Finished at: 2024-05-13T18:47:12Z [INFO] ------------------------------------------------------------------------ dh_auto_test /usr/lib/jvm/default-java/bin/java -noverify -cp /usr/share/maven/boot/plexus-classworlds-2.x.jar -Dmaven.home=/usr/share/maven -Dmaven.multiModuleProjectDirectory=/build/reproducible-path/libbeam-java-1.3.5 -Dclassworlds.conf=/etc/maven/m2-debian.conf -Dproperties.file.manual=/build/reproducible-path/libbeam-java-1.3.5/debian/maven.properties org.codehaus.plexus.classworlds.launcher.Launcher -s/etc/maven/settings-debian.xml -Ddebian.dir=/build/reproducible-path/libbeam-java-1.3.5/debian -Dmaven.repo.local=/build/reproducible-path/libbeam-java-1.3.5/debian/maven-repo --batch-mode test @@ -1850,16 +1886,38 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- +[INFO] Running uk.ac.ebi.beam.AtomCentricDBConfigTest +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.26 s - in uk.ac.ebi.beam.AtomCentricDBConfigTest +[INFO] Running uk.ac.ebi.beam.ValenceTest +[INFO] Tests run: 60, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.078 s - in uk.ac.ebi.beam.ValenceTest +[INFO] Running uk.ac.ebi.beam.AtomBuilderTest +[INFO] Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.011 s - in uk.ac.ebi.beam.AtomBuilderTest +[INFO] Running uk.ac.ebi.beam.DaylightRoundTrippingTest +[INFO] Tests run: 70, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.029 s - in uk.ac.ebi.beam.DaylightRoundTrippingTest +[INFO] Running uk.ac.ebi.beam.ElectronAssignmentTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.ebi.beam.ElectronAssignmentTest [INFO] Running uk.ac.ebi.beam.ElementTest -[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.399 s - in uk.ac.ebi.beam.ElementTest -[INFO] Running uk.ac.ebi.beam.IntSetTest -[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005 s - in uk.ac.ebi.beam.IntSetTest -[INFO] Running uk.ac.ebi.beam.BondTest -[INFO] Tests run: 26, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.026 s - in uk.ac.ebi.beam.BondTest +[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in uk.ac.ebi.beam.ElementTest +[INFO] Running uk.ac.ebi.beam.ParsingAtomChargeTest +[INFO] Tests run: 20, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in uk.ac.ebi.beam.ParsingAtomChargeTest +[INFO] Running uk.ac.ebi.beam.DaylightDelocalisationTest +[INFO] Tests run: 95, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.253 s - in uk.ac.ebi.beam.DaylightDelocalisationTest +[INFO] Running uk.ac.ebi.beam.ArbitraryMatchingTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.ebi.beam.ArbitraryMatchingTest +[INFO] Running uk.ac.ebi.beam.MaximumMatchingTest +[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.ebi.beam.MaximumMatchingTest +[INFO] Running uk.ac.ebi.beam.LocaliseTest +[INFO] Tests run: 78, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.094 s - in uk.ac.ebi.beam.LocaliseTest [INFO] Running uk.ac.ebi.beam.CharBufferTest -[INFO] Tests run: 20, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.024 s - in uk.ac.ebi.beam.CharBufferTest -[INFO] Running uk.ac.ebi.beam.ElectronAssignmentTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in uk.ac.ebi.beam.ElectronAssignmentTest +[INFO] Tests run: 20, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.007 s - in uk.ac.ebi.beam.CharBufferTest +[INFO] Running uk.ac.ebi.beam.TopologyTest +[INFO] Tests run: 27, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.009 s - in uk.ac.ebi.beam.TopologyTest +[INFO] Running uk.ac.ebi.beam.OpenSMILESSpecificationTest +[INFO] Tests run: 144, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.072 s - in uk.ac.ebi.beam.OpenSMILESSpecificationTest +[INFO] Running uk.ac.ebi.beam.ConfigurationTest +[INFO] Tests run: 22, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in uk.ac.ebi.beam.ConfigurationTest +[INFO] Running uk.ac.ebi.beam.EdgeTest +[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.ebi.beam.EdgeTest [INFO] Running uk.ac.ebi.beam.ParserTest SMILES Warning: Ignored invalid Cis/Trans on ring closure, should flip: SMILES Warning: C/C=C/1.C/1 @@ -1868,56 +1926,34 @@ SMILES Warning: Ignored invalid Cis/Trans specification: SMILES Warning: C/C=C(/C)/F SMILES Warning: ^ ^ -[WARNING] Tests run: 49, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.057 s - in uk.ac.ebi.beam.ParserTest -[INFO] Running uk.ac.ebi.beam.ConfigurationTest -[INFO] Tests run: 22, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.01 s - in uk.ac.ebi.beam.ConfigurationTest -[INFO] Running uk.ac.ebi.beam.GeneratorTest -[INFO] Tests run: 33, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.103 s - in uk.ac.ebi.beam.GeneratorTest -[INFO] Running uk.ac.ebi.beam.ParsingBracketAtomTest -[INFO] Tests run: 21, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.134 s - in uk.ac.ebi.beam.ParsingBracketAtomTest -[INFO] Running uk.ac.ebi.beam.ParsingAtomClassTest -[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005 s - in uk.ac.ebi.beam.ParsingAtomClassTest -[INFO] Running uk.ac.ebi.beam.IntStackTest -[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in uk.ac.ebi.beam.IntStackTest -[INFO] Running uk.ac.ebi.beam.ParsingAtomChargeTest -[INFO] Tests run: 20, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.01 s - in uk.ac.ebi.beam.ParsingAtomChargeTest -[INFO] Running uk.ac.ebi.beam.ValenceTest -[INFO] Tests run: 60, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.102 s - in uk.ac.ebi.beam.ValenceTest -[INFO] Running uk.ac.ebi.beam.GraphBuilderTest -[INFO] Tests run: 15, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.008 s - in uk.ac.ebi.beam.GraphBuilderTest -[INFO] Running uk.ac.ebi.beam.DaylightDelocalisationTest -[INFO] Tests run: 95, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.497 s - in uk.ac.ebi.beam.DaylightDelocalisationTest +[WARNING] Tests run: 49, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.017 s - in uk.ac.ebi.beam.ParserTest [INFO] Running uk.ac.ebi.beam.BiconnectedComponentsTest [INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.ebi.beam.BiconnectedComponentsTest +[INFO] Running uk.ac.ebi.beam.ParsingBracketAtomTest +[INFO] Tests run: 21, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.049 s - in uk.ac.ebi.beam.ParsingBracketAtomTest +[INFO] Running uk.ac.ebi.beam.BondTest +[INFO] Tests run: 26, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.024 s - in uk.ac.ebi.beam.BondTest +[INFO] Running uk.ac.ebi.beam.GraphBuilderTest +[INFO] Tests run: 15, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.033 s - in uk.ac.ebi.beam.GraphBuilderTest +[INFO] Running uk.ac.ebi.beam.ParsingAtomClassTest +[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.011 s - in uk.ac.ebi.beam.ParsingAtomClassTest +[INFO] Running uk.ac.ebi.beam.ParsingHydrogenCountTest +[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in uk.ac.ebi.beam.ParsingHydrogenCountTest [INFO] Running uk.ac.ebi.beam.MatchingTest -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.ebi.beam.MatchingTest -[INFO] Running uk.ac.ebi.beam.GraphTest -SMILES Warning: SquarePlanar without 5 explicit neighbours -[INFO] Tests run: 44, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.173 s - in uk.ac.ebi.beam.GraphTest -[INFO] Running uk.ac.ebi.beam.EdgeTest -[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.007 s - in uk.ac.ebi.beam.EdgeTest -[INFO] Running uk.ac.ebi.beam.OpenSMILESSpecificationTest -[INFO] Tests run: 144, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.196 s - in uk.ac.ebi.beam.OpenSMILESSpecificationTest +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.012 s - in uk.ac.ebi.beam.MatchingTest [INFO] Running uk.ac.ebi.beam.AtomTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in uk.ac.ebi.beam.AtomTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.ebi.beam.AtomTest +[INFO] Running uk.ac.ebi.beam.GeneratorTest +[INFO] Tests run: 33, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.042 s - in uk.ac.ebi.beam.GeneratorTest [INFO] Running uk.ac.ebi.beam.UnionFindTest -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.ebi.beam.UnionFindTest -[INFO] Running uk.ac.ebi.beam.AtomBuilderTest -[INFO] Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.012 s - in uk.ac.ebi.beam.AtomBuilderTest -[INFO] Running uk.ac.ebi.beam.LocaliseTest -[INFO] Tests run: 78, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.027 s - in uk.ac.ebi.beam.LocaliseTest -[INFO] Running uk.ac.ebi.beam.AtomCentricDBConfigTest -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in uk.ac.ebi.beam.AtomCentricDBConfigTest -[INFO] Running uk.ac.ebi.beam.ArbitraryMatchingTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.071 s - in uk.ac.ebi.beam.ArbitraryMatchingTest -[INFO] Running uk.ac.ebi.beam.TopologyTest -[INFO] Tests run: 27, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.01 s - in uk.ac.ebi.beam.TopologyTest -[INFO] Running uk.ac.ebi.beam.DaylightRoundTrippingTest -[INFO] Tests run: 70, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.024 s - in uk.ac.ebi.beam.DaylightRoundTrippingTest -[INFO] Running uk.ac.ebi.beam.ParsingHydrogenCountTest -[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005 s - in uk.ac.ebi.beam.ParsingHydrogenCountTest -[INFO] Running uk.ac.ebi.beam.MaximumMatchingTest -[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.006 s - in uk.ac.ebi.beam.MaximumMatchingTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.ebi.beam.UnionFindTest +[INFO] Running uk.ac.ebi.beam.IntStackTest +[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.ebi.beam.IntStackTest +[INFO] Running uk.ac.ebi.beam.GraphTest +SMILES Warning: SquarePlanar without 5 explicit neighbours +[INFO] Tests run: 44, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.352 s - in uk.ac.ebi.beam.GraphTest +[INFO] Running uk.ac.ebi.beam.IntSetTest +[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.ebi.beam.IntSetTest [INFO] [INFO] Results: [INFO] @@ -1945,28 +1981,28 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running uk.ac.ebi.beam.AddDirectionalLabelsTest -[INFO] Tests run: 22, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.343 s - in uk.ac.ebi.beam.AddDirectionalLabelsTest -[INFO] Running uk.ac.ebi.beam.NormaliseDirectionalLabelsTest -[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.179 s - in uk.ac.ebi.beam.NormaliseDirectionalLabelsTest +[INFO] Running uk.ac.ebi.beam.FromTrigonalTopologyTest +[INFO] Tests run: 18, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.344 s - in uk.ac.ebi.beam.FromTrigonalTopologyTest +[INFO] Running uk.ac.ebi.beam.ToTrigonalTopologyTest +[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.044 s - in uk.ac.ebi.beam.ToTrigonalTopologyTest +[INFO] Running uk.ac.ebi.beam.BondBasedConfigurationTest +[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.ebi.beam.BondBasedConfigurationTest [INFO] Running uk.ac.ebi.beam.FunctionsTest -[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.053 s - in uk.ac.ebi.beam.FunctionsTest +[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.021 s - in uk.ac.ebi.beam.FunctionsTest +[INFO] Running uk.ac.ebi.beam.RemoveUpDownBondsTest +[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.022 s - in uk.ac.ebi.beam.RemoveUpDownBondsTest +[INFO] Running uk.ac.ebi.beam.ImplicitToExplicitTest +[INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.334 s - in uk.ac.ebi.beam.ImplicitToExplicitTest +[INFO] Running uk.ac.ebi.beam.AddDirectionalLabelsTest +[INFO] Tests run: 22, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.048 s - in uk.ac.ebi.beam.AddDirectionalLabelsTest [INFO] Running uk.ac.ebi.beam.ToSubsetAtomsTest -[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.125 s - in uk.ac.ebi.beam.ToSubsetAtomsTest -[INFO] Running uk.ac.ebi.beam.FromTrigonalTopologyTest -[INFO] Tests run: 18, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.157 s - in uk.ac.ebi.beam.FromTrigonalTopologyTest +[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.012 s - in uk.ac.ebi.beam.ToSubsetAtomsTest [INFO] Running uk.ac.ebi.beam.ExplicitToImplicitTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.ebi.beam.ExplicitToImplicitTest -[INFO] Running uk.ac.ebi.beam.RemoveUpDownBondsTest -[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.044 s - in uk.ac.ebi.beam.RemoveUpDownBondsTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.ebi.beam.ExplicitToImplicitTest +[INFO] Running uk.ac.ebi.beam.NormaliseDirectionalLabelsTest +[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.027 s - in uk.ac.ebi.beam.NormaliseDirectionalLabelsTest [INFO] Running uk.ac.ebi.beam.FromSubsetAtomsTest -[INFO] Tests run: 22, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.159 s - in uk.ac.ebi.beam.FromSubsetAtomsTest -[INFO] Running uk.ac.ebi.beam.ImplicitToExplicitTest -[INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 7.927 s - in uk.ac.ebi.beam.ImplicitToExplicitTest -[INFO] Running uk.ac.ebi.beam.ToTrigonalTopologyTest -[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.142 s - in uk.ac.ebi.beam.ToTrigonalTopologyTest -[INFO] Running uk.ac.ebi.beam.BondBasedConfigurationTest -[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in uk.ac.ebi.beam.BondBasedConfigurationTest +[INFO] Tests run: 22, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.025 s - in uk.ac.ebi.beam.FromSubsetAtomsTest [INFO] [INFO] Results: [INFO] @@ -1994,15 +2030,15 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for beam 1.3.5: [INFO] -[INFO] beam ............................................... SUCCESS [ 0.026 s] -[INFO] beam-core .......................................... SUCCESS [ 25.990 s] -[INFO] beam-func .......................................... SUCCESS [ 20.389 s] -[INFO] beam-exec .......................................... SUCCESS [ 0.445 s] +[INFO] beam ............................................... SUCCESS [ 0.008 s] +[INFO] beam-core .......................................... SUCCESS [ 12.832 s] +[INFO] beam-func .......................................... SUCCESS [ 10.176 s] +[INFO] beam-exec .......................................... SUCCESS [ 0.124 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 47.751 s -[INFO] Finished at: 2024-05-13T18:41:39Z +[INFO] Total time: 23.618 s +[INFO] Finished at: 2024-05-13T18:47:41Z [INFO] ------------------------------------------------------------------------ create-stamp debian/debhelper-build-stamp dh_prep @@ -2068,15 +2104,15 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for beam 1.3.5: [INFO] -[INFO] beam ............................................... SUCCESS [ 5.772 s] -[INFO] beam-core .......................................... SUCCESS [ 0.692 s] -[INFO] beam-func .......................................... SUCCESS [ 0.341 s] -[INFO] beam-exec .......................................... SUCCESS [ 0.757 s] +[INFO] beam ............................................... SUCCESS [ 1.305 s] +[INFO] beam-core .......................................... SUCCESS [ 0.101 s] +[INFO] beam-func .......................................... SUCCESS [ 0.079 s] +[INFO] beam-exec .......................................... SUCCESS [ 0.092 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 10.069 s -[INFO] Finished at: 2024-05-13T18:42:09Z +[INFO] Total time: 2.127 s +[INFO] Finished at: 2024-05-13T18:47:48Z [INFO] ------------------------------------------------------------------------ mh_resolve_dependencies --non-interactive --offline --build -plibbeam-java --base-directory=/build/reproducible-path/libbeam-java-1.3.5 --non-explore Analysing pom.xml... @@ -2107,12 +2143,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/17398/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/17398/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/16046 and its subdirectories -I: Current time: Mon May 13 06:43:14 -12 2024 -I: pbuilder-time-stamp: 1715625794 +I: removing directory /srv/workspace/pbuilder/17398 and its subdirectories +I: Current time: Tue May 14 08:48:03 +14 2024 +I: pbuilder-time-stamp: 1715626083