Diff of the two buildlogs: -- --- b1/build.log 2024-04-08 01:54:38.653117253 +0000 +++ b2/build.log 2024-04-08 02:01:40.747184234 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Apr 7 13:51:41 -12 2024 -I: pbuilder-time-stamp: 1712541101 +I: Current time: Mon Apr 8 15:55:23 +14 2024 +I: pbuilder-time-stamp: 1712541323 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -28,52 +28,84 @@ dpkg-source: info: unpacking dcm2niix_1.0.20220720-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/31700/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/29999/tmp/hooks/D01_modify_environment starting +debug: Running on ff64a. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 8 01:56 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/29999/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/29999/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='73e9bbeda6024478a04f6507e4bd68d1' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='31700' - PS1='# ' - PS2='> ' + INVOCATION_ID=d70c3471ff3b41898d7d00baea8abbfb + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=29999 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.1019ER4d/pbuilderrc_DWTE --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.1019ER4d/b1 --logfile b1/build.log dcm2niix_1.0.20220720-1.dsc' - SUDO_GID='110' - SUDO_UID='103' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.1019ER4d/pbuilderrc_5kk3 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.1019ER4d/b2 --logfile b2/build.log dcm2niix_1.0.20220720-1.dsc' + SUDO_GID=114 + SUDO_UID=109 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt32z 6.1.0-18-armmp-lpae #1 SMP Debian 6.1.76-1 (2024-02-01) armv7l GNU/Linux + Linux i-capture-the-hostname 6.1.0-18-arm64 #1 SMP Debian 6.1.76-1 (2024-02-01) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Apr 7 11:25 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/31700/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Apr 6 11:27 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/29999/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -224,7 +256,7 @@ Get: 100 http://deb.debian.org/debian trixie/main armhf sphinx-common all 7.2.6-6 [702 kB] Get: 101 http://deb.debian.org/debian trixie/main armhf python3-sphinx all 7.2.6-6 [552 kB] Get: 102 http://deb.debian.org/debian trixie/main armhf zlib1g-dev armhf 1:1.3.dfsg-3+b1 [904 kB] -Fetched 47.4 MB in 1s (72.1 MB/s) +Fetched 47.4 MB in 1s (33.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19637 files and directories currently installed.) @@ -561,8 +593,8 @@ Setting up tzdata (2024a-1) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon Apr 8 01:52:41 UTC 2024. -Universal Time is now: Mon Apr 8 01:52:41 UTC 2024. +Local time is now: Mon Apr 8 01:57:23 UTC 2024. +Universal Time is now: Mon Apr 8 01:57:23 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libturbojpeg0-dev:armhf (1:2.1.5-2+b2) ... @@ -665,7 +697,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/dcm2niix-1.0.20220720/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dcm2niix_1.0.20220720-1_source.changes +I: user script /srv/workspace/pbuilder/29999/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/29999/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/dcm2niix-1.0.20220720/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dcm2niix_1.0.20220720-1_source.changes dpkg-buildpackage: info: source package dcm2niix dpkg-buildpackage: info: source version 1.0.20220720-1 dpkg-buildpackage: info: source distribution unstable @@ -812,7 +848,7 @@ "/usr/lib/arm-linux-gnueabihf/openjpeg-2.5/OpenJPEGTargets.cmake" but not all the files it references. --- Configuring done (2.5s) +-- Configuring done (4.4s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -832,7 +868,7 @@ debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20220720' dh_auto_build - cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-arm-linux-gnueabihf && make -j6 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/dcm2niix-1.0.20220720/console -B/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks @@ -845,33 +881,23 @@ make[4]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf' cd /build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/dcm2niix-1.0.20220720/console /build/reproducible-path/dcm2niix-1.0.20220720/console /build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf /build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf /build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf/CMakeFiles/dcm2niibatch.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf' -make -f CMakeFiles/dcm2niibatch.dir/build.make CMakeFiles/dcm2niibatch.dir/build +make -f CMakeFiles/dcm2niix.dir/build.make CMakeFiles/dcm2niix.dir/build make[4]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf' make[4]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf' -make -f CMakeFiles/dcm2niix.dir/build.make CMakeFiles/dcm2niix.dir/build +make -f CMakeFiles/dcm2niibatch.dir/build.make CMakeFiles/dcm2niibatch.dir/build make[4]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf' -[ 5%] Building CXX object CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o -MF CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/main_console_batch.cpp -[ 11%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp -[ 16%] Building CXX object CMakeFiles/dcm2niix.dir/main_console.cpp.o +[ 5%] Building CXX object CMakeFiles/dcm2niix.dir/main_console.cpp.o +[ 11%] Building CXX object CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o +[ 16%] Building CXX object CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o /usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/main_console.cpp.o -MF CMakeFiles/dcm2niix.dir/main_console.cpp.o.d -o CMakeFiles/dcm2niix.dir/main_console.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/main_console.cpp -/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp: In function 'unsigned char* nii_loadImgCoreOpenJPEG(char*, nifti_1_header, TDICOMdata, int)': -/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:225:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'long int' [-Wsign-compare] -/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp: In function 'TDICOMdata readDICOMx(char*, TDCMprefs*, TDTI4D*)': -/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:5759:96: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] -/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:6760:86: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] -/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:7073:57: warning: format '%ld' expects argument of type 'long int', but argument 8 has type 'size_t' {aka 'unsigned int'} [-Wformat=] -[ 22%] Building CXX object CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o /usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp -/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp: In function 'unsigned char* nii_loadImgCoreOpenJPEG(char*, nifti_1_header, TDICOMdata, int)': -/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:225:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'long int' [-Wsign-compare] -/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp: In function 'TDICOMdata readDICOMx(char*, TDCMprefs*, TDTI4D*)': -/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:5759:96: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] -/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:6760:86: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] -/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:7073:57: warning: format '%ld' expects argument of type 'long int', but argument 8 has type 'size_t' {aka 'unsigned int'} [-Wformat=] -[ 27%] Building CXX object CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o -MF CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp +[ 22%] Building CXX object CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o +[ 27%] Building CXX object CMakeFiles/dcm2niix.dir/ujpeg.cpp.o +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o -MF CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o.d -o CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/ujpeg.cpp.o -MF CMakeFiles/dcm2niix.dir/ujpeg.cpp.o.d -o CMakeFiles/dcm2niix.dir/ujpeg.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/ujpeg.cpp +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o -MF CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o.d -o CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nifti1_io_core.cpp +[ 33%] Building CXX object CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o -MF CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/main_console_batch.cpp /build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:186: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:260: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:262: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] @@ -879,16 +905,20 @@ /build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp: In function 'unsigned char* decode_JPEG_SOF_0XC3(const char*, int, bool, int*, int*, int*, int*, int)': /build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:135:29: warning: variable 'btS2' set but not used [-Wunused-but-set-variable] /build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:135:35: warning: variable 'SOSse' set but not used [-Wunused-but-set-variable] -[ 33%] Building CXX object CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o -MF CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/ujpeg.cpp -[ 38%] Building CXX object CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nifti1_io_core.cpp -[ 44%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_foreign.cpp -[ 50%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_ortho.cpp -[ 55%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp +/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp: In function 'unsigned char* nii_loadImgCoreOpenJPEG(char*, nifti_1_header, TDICOMdata, int)': +/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:225:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'long int' [-Wsign-compare] +/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp: In function 'TDICOMdata readDICOMx(char*, TDCMprefs*, TDTI4D*)': +/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:5759:96: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] +/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:6760:86: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] +/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:7073:57: warning: format '%ld' expects argument of type 'long int', but argument 8 has type 'size_t' {aka 'unsigned int'} [-Wformat=] +[ 38%] Building CXX object CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_foreign.cpp +[ 44%] Building CXX object CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_ortho.cpp +[ 50%] Building CXX object CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp +[ 55%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp In file included from /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:22: /build/reproducible-path/dcm2niix-1.0.20220720/console/miniz.c:3805: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20220720/console/miniz.c:3808: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] @@ -1007,6 +1037,17 @@ /build/reproducible-path/dcm2niix-1.0.20220720/console/miniz.c: In function 'void tdefl_find_match(tdefl_compressor*, mz_uint, mz_uint, mz_uint, mz_uint*, mz_uint*)': /build/reproducible-path/dcm2niix-1.0.20220720/console/miniz.c:2324:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20220720/console/miniz.c:2324:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' +[ 61%] Building CXX object CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o -MF CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp +/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:186: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] +/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:260: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] +/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:262: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] +/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:267: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] +/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp: In function 'unsigned char* nii_loadImgCoreOpenJPEG(char*, nifti_1_header, TDICOMdata, int)': +/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:225:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'long int' [-Wsign-compare] +/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp: In function 'unsigned char* decode_JPEG_SOF_0XC3(const char*, int, bool, int*, int*, int*, int*, int)': +/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:135:29: warning: variable 'btS2' set but not used [-Wunused-but-set-variable] +/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:135:35: warning: variable 'SOSse' set but not used [-Wunused-but-set-variable] /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp: In function 'void nii_SaveBIDSX(char*, TDICOMdata, TDCMopts, nifti_1_header*, const char*, TDTI4D*)': /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:97:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:2016:28: note: in expansion of macro 'max' @@ -1041,6 +1082,10 @@ /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:4833:30: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:97:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:4834:30: note: in expansion of macro 'max' +/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp: In function 'TDICOMdata readDICOMx(char*, TDCMprefs*, TDTI4D*)': +/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:5759:96: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] +/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:6760:86: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] +/build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom.cpp:7073:57: warning: format '%ld' expects argument of type 'long int', but argument 8 has type 'size_t' {aka 'unsigned int'} [-Wformat=] /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp: In function 'void sliceTimingXA(TDCMsort*, TDICOMdata*, nifti_1_header*, int, const char*, int)': /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:104:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:5894:22: note: in expansion of macro 'min' @@ -1061,25 +1106,16 @@ /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:6675:57: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:97:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:6681:81: note: in expansion of macro 'max' -[ 61%] Building CXX object CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o -MF CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o.d -o CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp -/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:186: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] -/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:260: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] -/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:262: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] -/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:267: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] -/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp: In function 'unsigned char* decode_JPEG_SOF_0XC3(const char*, int, bool, int*, int*, int*, int*, int)': -/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:135:29: warning: variable 'btS2' set but not used [-Wunused-but-set-variable] -/build/reproducible-path/dcm2niix-1.0.20220720/console/jpg_0XC3.cpp:135:35: warning: variable 'SOSse' set but not used [-Wunused-but-set-variable] -[ 66%] Building CXX object CMakeFiles/dcm2niix.dir/ujpeg.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/ujpeg.cpp.o -MF CMakeFiles/dcm2niix.dir/ujpeg.cpp.o.d -o CMakeFiles/dcm2niix.dir/ujpeg.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/ujpeg.cpp -[ 72%] Building CXX object CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o -MF CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o.d -o CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nifti1_io_core.cpp -[ 77%] Building CXX object CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_foreign.cpp -[ 83%] Building CXX object CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_ortho.cpp -[ 88%] Building CXX object CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp +[ 66%] Building CXX object CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o -MF CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/ujpeg.cpp +[ 72%] Building CXX object CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nifti1_io_core.cpp +[ 77%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_foreign.cpp +[ 83%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_ortho.cpp +[ 88%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o +/usr/bin/c++ -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp In file included from /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:22: /build/reproducible-path/dcm2niix-1.0.20220720/console/miniz.c:3805: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20220720/console/miniz.c:3808: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] @@ -1262,11 +1298,11 @@ /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:8414:21: note: 'dir' declared here /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:8416:20: warning: 'dir.tinydir_dir::has_next' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:8414:21: note: 'dir' declared here -[ 94%] Linking CXX executable dcm2niibatch -/usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2niibatch.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -o dcm2niibatch -lyaml-cpp -lturbojpeg /usr/lib/arm-linux-gnueabihf/libopenjp2.so.2.5.0 -lm +[ 94%] Linking CXX executable dcm2niix +/usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2niix.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/dcm2niix.dir/main_console.cpp.o CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o CMakeFiles/dcm2niix.dir/ujpeg.cpp.o CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -o dcm2niix -lturbojpeg /usr/lib/arm-linux-gnueabihf/libopenjp2.so.2.5.0 -lm make[4]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf' -[ 94%] Built target dcm2niibatch +[ 94%] Built target dcm2niix /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp: In function 'int searchDirForDICOM(char*, TSearchList*, int, int, TDCMopts*)': /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:7709:20: warning: 'dir.tinydir_dir::has_next' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:7707:21: note: 'dir' declared here @@ -1277,11 +1313,11 @@ /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:8414:21: note: 'dir' declared here /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:8416:20: warning: 'dir.tinydir_dir::has_next' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20220720/console/nii_dicom_batch.cpp:8414:21: note: 'dir' declared here -[100%] Linking CXX executable dcm2niix -/usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2niix.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/dcm2niix.dir/main_console.cpp.o CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o CMakeFiles/dcm2niix.dir/ujpeg.cpp.o CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -o dcm2niix -lturbojpeg /usr/lib/arm-linux-gnueabihf/libopenjp2.so.2.5.0 -lm +[100%] Linking CXX executable dcm2niibatch +/usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2niibatch.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20220720=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -o dcm2niibatch -lyaml-cpp -lturbojpeg /usr/lib/arm-linux-gnueabihf/libopenjp2.so.2.5.0 -lm make[4]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf' -[100%] Built target dcm2niix +[100%] Built target dcm2niibatch make[3]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf' @@ -1308,7 +1344,7 @@ dh_testroot -O--sourcedirectory=console -O--buildsystem=cmake dh_prep -O--sourcedirectory=console -O--buildsystem=cmake dh_auto_install --destdir=debian/dcm2niix/ -O--sourcedirectory=console -O--buildsystem=cmake - cd obj-arm-linux-gnueabihf && make -j3 install DESTDIR=/build/reproducible-path/dcm2niix-1.0.20220720/debian/dcm2niix AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-arm-linux-gnueabihf && make -j6 install DESTDIR=/build/reproducible-path/dcm2niix-1.0.20220720/debian/dcm2niix AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/dcm2niix-1.0.20220720/console -B/build/reproducible-path/dcm2niix-1.0.20220720/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -1351,12 +1387,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/29999/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/29999/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/31700 and its subdirectories -I: Current time: Sun Apr 7 13:54:34 -12 2024 -I: pbuilder-time-stamp: 1712541274 +I: removing directory /srv/workspace/pbuilder/29999 and its subdirectories +I: Current time: Mon Apr 8 16:01:35 +14 2024 +I: pbuilder-time-stamp: 1712541695