Diff of the two buildlogs: -- --- b1/build.log 2024-04-18 09:00:22.168818760 +0000 +++ b2/build.log 2024-04-18 09:21:03.899895981 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Apr 17 20:17:19 -12 2024 -I: pbuilder-time-stamp: 1713428239 +I: Current time: Thu Apr 18 23:00:31 +14 2024 +I: pbuilder-time-stamp: 1713430831 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -30,52 +30,84 @@ dpkg-source: info: applying spellings.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/5987/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/32705/tmp/hooks/D01_modify_environment starting +debug: Running on virt64z. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 18 09:00 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/32705/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/32705/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='b773f2cd96164a559c723a759a9f4c92' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='5987' - PS1='# ' - PS2='> ' + INVOCATION_ID=bda549a63f9647378734957800ba6c2d + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=32705 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XgX4bIOW/pbuilderrc_SOHd --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XgX4bIOW/b1 --logfile b1/build.log art-nextgen-simulation-tools_20160605+dfsg-5.dsc' - SUDO_GID='113' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XgX4bIOW/pbuilderrc_fH5H --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XgX4bIOW/b2 --logfile b2/build.log art-nextgen-simulation-tools_20160605+dfsg-5.dsc' + SUDO_GID=110 + SUDO_UID=103 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux ff4a 6.1.0-20-armmp-lpae #1 SMP Debian 6.1.85-1 (2024-04-11) armv7l GNU/Linux + Linux i-capture-the-hostname 6.1.0-20-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 17 11:24 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/5987/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/32705/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -146,7 +178,7 @@ Get: 31 http://deb.debian.org/debian trixie/main armhf libgslcblas0 armhf 2.7.1+dfsg-6+b1 [79.6 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf libgsl27 armhf 2.7.1+dfsg-6+b1 [767 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libgsl-dev armhf 2.7.1+dfsg-6+b1 [975 kB] -Fetched 20.2 MB in 2s (10.3 MB/s) +Fetched 20.2 MB in 1s (23.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19635 files and directories currently installed.) @@ -293,7 +325,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../art-nextgen-simulation-tools_20160605+dfsg-5_source.changes +I: user script /srv/workspace/pbuilder/32705/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/32705/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../art-nextgen-simulation-tools_20160605+dfsg-5_source.changes dpkg-buildpackage: info: source package art-nextgen-simulation-tools dpkg-buildpackage: info: source version 20160605+dfsg-5 dpkg-buildpackage: info: source distribution unstable @@ -364,7 +400,7 @@ config.status: creating config.h config.status: executing depfiles commands dh_auto_build - make -j3 + make -j4 make[1]: Entering directory '/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg' make all-am make[2]: Entering directory '/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg' @@ -372,6 +408,8 @@ g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_illumina_src/art_qual_scale.o art_illumina_src/art_qual_scale.cpp g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_illumina_src/empdist.o art_illumina_src/empdist.cpp g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_illumina_src/readSeqFile.o art_illumina_src/readSeqFile.cpp +g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_illumina_src/seqRead.o art_illumina_src/seqRead.cpp +g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_illumina_src/samRead.o art_illumina_src/samRead.cpp In file included from /usr/include/c++/13/vector:72, from art_illumina_src/art.h:34, from art_illumina_src/art_illumina.cpp:32: @@ -385,13 +423,12 @@ /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_illumina_src/seqRead.o art_illumina_src/seqRead.cpp -g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_illumina_src/samRead.o art_illumina_src/samRead.cpp g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_454_src/art_454.o art_454_src/art_454.cpp g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_454_src/art.o art_454_src/art.cpp g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_454_src/read_profile.o art_454_src/read_profile.cpp g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_454_src/readSeqFile.o art_454_src/readSeqFile.cpp g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_454_src/seqRead.o art_454_src/seqRead.cpp +g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_454_src/samRead.o art_454_src/samRead.cpp In file included from /usr/include/c++/13/vector:72, from art_454_src/read_profile.h:25, from art_454_src/read_profile.cpp:26: @@ -410,7 +447,6 @@ /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_454_src/samRead.o art_454_src/samRead.cpp g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_SOLiD_src/art_SOLiD.o art_SOLiD_src/art_SOLiD.cpp g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_SOLiD_src/art.o art_SOLiD_src/art.cpp g++ -DHAVE_CONFIG_H -I. -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o art_SOLiD_src/readSeqFile.o art_SOLiD_src/readSeqFile.cpp @@ -597,9 +633,9 @@ Single-end simulation -Total CPU time used: 0.17652 +Total CPU time used: 0.137516 -The random seed for the run: 1713428429 +The random seed for the run: 1713430911 Parameters Settings number of flow cycles: 100 @@ -630,9 +666,9 @@ Paired-end simulation -Total CPU time used: 0.140964 +Total CPU time used: 0.108795 -The random seed for the run: 1713428429 +The random seed for the run: 1713430911 Parameters Settings number of flow cycles: 100 @@ -668,9 +704,9 @@ Paired-end simulation -Total CPU time used: 0.1536 +Total CPU time used: 0.114065 -The random seed for the run: 1713428429 +The random seed for the run: 1713430911 Parameters Settings number of flow cycles: 200 @@ -706,9 +742,9 @@ Amplicon 5'-end sequencing with single-end reads -Total CPU time used: 31.5466 +Total CPU time used: 23.5914 -The random seed for the run: 1713428430 +The random seed for the run: 1713430911 Parameters Settings number of flow cycles: 100 @@ -739,9 +775,9 @@ Amplicon two-end sequencing with paired-end reads -Total CPU time used: 25.8549 +Total CPU time used: 19.6135 -The random seed for the run: 1713428463 +The random seed for the run: 1713430935 Parameters Settings number of flow cycles: 100 @@ -774,7 +810,7 @@ Single-end simulation -Total CPU time used: 0.18317 +Total CPU time used: 0.129672 The random seed for the run: 777 @@ -807,7 +843,7 @@ Single-end simulation -Total CPU time used: 0.182166 +Total CPU time used: 0.129268 The random seed for the run: 777 @@ -841,9 +877,9 @@ Single-end simulation -Total CPU time used: 0.322873 +Total CPU time used: 0.208493 -The random seed for the run: 1713428490 +The random seed for the run: 1713430955 Parameters Settings fold of read coverage: 10X @@ -873,9 +909,9 @@ Single-end simulation -Total CPU time used: 0.33908 +Total CPU time used: 0.231209 -The random seed for the run: 1713428490 +The random seed for the run: 1713430956 Parameters Settings fold of read coverage: 20X @@ -903,9 +939,9 @@ Mate-Pair (F3-R3) simulation -Total CPU time used: 0.469631 +Total CPU time used: 0.331679 -The random seed for the run: 1713428491 +The random seed for the run: 1713430956 Parameters Settings fold of read coverage: 20X @@ -943,7 +979,7 @@ Mate-Pair (F3-R3) simulation -Total CPU time used: 0.21764 +Total CPU time used: 0.143871 The random seed for the run: 777 @@ -981,7 +1017,7 @@ Mate-Pair (F3-R3) simulation -Total CPU time used: 0.244941 +Total CPU time used: 0.145024 The random seed for the run: 777 @@ -1024,9 +1060,9 @@ Paired-end (F3-F5) simulation -Total CPU time used: 0.695315 +Total CPU time used: 0.484233 -The random seed for the run: 1713428492 +The random seed for the run: 1713430957 Parameters Settings fold of read coverage: 50X @@ -1060,9 +1096,9 @@ Amplicon single-end sequencing simulation -Total CPU time used: 868.607 +Total CPU time used: 539.108 -The random seed for the run: 1713428493 +The random seed for the run: 1713430957 Parameters Settings # reads per amplion: 100 @@ -1092,9 +1128,9 @@ Amplicon matepair sequencing simulation -Total CPU time used: 580.19 +Total CPU time used: 283.123 -The random seed for the run: 1713429430 +The random seed for the run: 1713431524 Parameters Settings # read pairs per amplion: 80 @@ -1125,9 +1161,9 @@ Amplicon paired-end sequencing simulation -Total CPU time used: 466.025 +Total CPU time used: 203.569 -The random seed for the run: 1713430102 +The random seed for the run: 1713431812 Parameters Settings # read pairs per amplion: 50 @@ -1159,9 +1195,9 @@ Single-end Simulation -Total CPU time used: 0.320466 +Total CPU time used: 0.155395 -The random seed for the run: 1713430700 +The random seed for the run: 1713432018 Parameters used during run Read Length: 35 @@ -1193,9 +1229,9 @@ Single-end Simulation -Total CPU time used: 0.25198 +Total CPU time used: 0.124512 -The random seed for the run: 1713430701 +The random seed for the run: 1713432018 Parameters used during run Read Length: 50 @@ -1227,9 +1263,9 @@ Paired-end sequencing simulation -Total CPU time used: 0.139636 +Total CPU time used: 0.07127 -The random seed for the run: 1713430702 +The random seed for the run: 1713432018 Parameters used during run Read Length: 150 @@ -1266,9 +1302,9 @@ Paired-end sequencing simulation -Total CPU time used: 0.242572 +Total CPU time used: 0.116695 -The random seed for the run: 1713430702 +The random seed for the run: 1713432018 Parameters used during run Read Length: 100 @@ -1305,9 +1341,9 @@ Matepair-end sequencing simulation -Total CPU time used: 0.182956 +Total CPU time used: 0.086824 -The random seed for the run: 1713430703 +The random seed for the run: 1713432018 Parameters used during run Read Length: 100 @@ -1344,9 +1380,9 @@ Amplicon 5'-end sequencing simulation -Total CPU time used: 1.95772 +Total CPU time used: 0.918241 -The random seed for the run: 1713430703 +The random seed for the run: 1713432018 Parameters used during run Read Length: 100 @@ -1378,9 +1414,9 @@ Amplicon paired-end sequencing simulation -Total CPU time used: 2.28322 +Total CPU time used: 0.989977 -The random seed for the run: 1713430706 +The random seed for the run: 1713432019 Parameters used during run Read Length: 100 @@ -1415,9 +1451,9 @@ Amplicon matepair sequencing simulation -Total CPU time used: 2.3942 +Total CPU time used: 1.29509 -The random seed for the run: 1713430709 +The random seed for the run: 1713432021 Parameters used during run Read Length: 100 @@ -1452,7 +1488,7 @@ Paired-end sequencing simulation -Total CPU time used: 0.19171 +Total CPU time used: 0.08376 The random seed for the run: 777 @@ -1491,7 +1527,7 @@ Paired-end sequencing simulation -Total CPU time used: 0.17999 +Total CPU time used: 0.087895 The random seed for the run: 777 @@ -1530,9 +1566,9 @@ Paired-end sequencing simulation -Total CPU time used: 0.233556 +Total CPU time used: 0.090203 -The random seed for the run: 1713430715 +The random seed for the run: 1713432022 Parameters used during run Read Length: 100 @@ -1571,9 +1607,9 @@ Paired-end sequencing simulation -Total CPU time used: 0.181077 +Total CPU time used: 0.097627 -The random seed for the run: 1713430715 +The random seed for the run: 1713432022 Parameters used during run Read Length: 75 @@ -1606,12 +1642,12 @@ create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install - make -j3 install DESTDIR=/build/reproducible-path/art-nextgen-simulation-tools-20160605\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no + make -j4 install DESTDIR=/build/reproducible-path/art-nextgen-simulation-tools-20160605\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg' make[2]: Entering directory '/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg' - /usr/bin/mkdir -p '/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg/debian/tmp/usr/bin' make[2]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg/debian/tmp/usr/bin' + /usr/bin/mkdir -p '/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg/debian/tmp/usr/bin' /usr/bin/install -c aln2bed.pl map2bed.pl ART_profiler_454/art_profiler_454 ART_profiler_illumina/combinedAvg.pl ART_profiler_illumina/fastqReadAvg.pl ART_profiler_illumina/art_profiler_illumina ART_profiler_illumina/empDist.pl ART_profiler_illumina/summation.pl '/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg/debian/tmp/usr/bin' /usr/bin/install -c art_illumina art_454 art_SOLiD '/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg/debian/tmp/usr/bin' make[2]: Leaving directory '/build/reproducible-path/art-nextgen-simulation-tools-20160605+dfsg' @@ -1666,8 +1702,8 @@ dpkg-gencontrol: warning: package art-nextgen-simulation-tools: substitution variable ${perl:Depends} unused, but is defined dh_md5sums dh_builddeb -dpkg-deb: building package 'art-nextgen-simulation-tools-dbgsym' in '../art-nextgen-simulation-tools-dbgsym_20160605+dfsg-5_armhf.deb'. dpkg-deb: building package 'art-nextgen-simulation-tools' in '../art-nextgen-simulation-tools_20160605+dfsg-5_armhf.deb'. +dpkg-deb: building package 'art-nextgen-simulation-tools-dbgsym' in '../art-nextgen-simulation-tools-dbgsym_20160605+dfsg-5_armhf.deb'. dpkg-deb: building package 'art-nextgen-simulation-tools-profiles' in '../art-nextgen-simulation-tools-profiles_20160605+dfsg-5_all.deb'. dpkg-genbuildinfo --build=binary -O../art-nextgen-simulation-tools_20160605+dfsg-5_armhf.buildinfo dpkg-genchanges --build=binary -O../art-nextgen-simulation-tools_20160605+dfsg-5_armhf.changes @@ -1676,12 +1712,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/32705/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/32705/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/5987 and its subdirectories -I: Current time: Wed Apr 17 21:00:09 -12 2024 -I: pbuilder-time-stamp: 1713430809 +I: removing directory /srv/workspace/pbuilder/32705 and its subdirectories +I: Current time: Thu Apr 18 23:20:52 +14 2024 +I: pbuilder-time-stamp: 1713432052