Diff of the two buildlogs: -- --- b1/build.log 2024-04-28 21:42:49.671634562 +0000 +++ b2/build.log 2024-04-28 21:44:58.986129873 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat May 31 16:04:46 -12 2025 -I: pbuilder-time-stamp: 1748750686 +I: Current time: Mon Apr 29 11:42:54 +14 2024 +I: pbuilder-time-stamp: 1714340574 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -27,52 +27,84 @@ dpkg-source: info: applying use-upstream-go-logger.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3141793/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1460847/tmp/hooks/D01_modify_environment starting +debug: Running on codethink02-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 28 21:43 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1460847/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1460847/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='4f4ac94e43ed4031b4c20e7e14657c0a' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3141793' - PS1='# ' - PS2='> ' + INVOCATION_ID=056abbcdba0345d78f0a4f83acbb34de + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1460847 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.2xPbw3oS/pbuilderrc_hYiU --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.2xPbw3oS/b1 --logfile b1/build.log unikmer_0.19.1-1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.2xPbw3oS/pbuilderrc_k2nn --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.2xPbw3oS/b2 --logfile b2/build.log unikmer_0.19.1-1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink01-arm64 6.1.0-20-cloud-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-20-cloud-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 26 17:47 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3141793/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Apr 21 07:15 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1460847/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -250,7 +282,7 @@ Get: 100 http://deb.debian.org/debian trixie/main arm64 golang-github-tatsushid-go-prettytable-dev all 0.0~git20141013.ed2d14c-3 [5492 B] Get: 101 http://deb.debian.org/debian trixie/main arm64 golang-github-will-rowe-nthash-dev all 0.4.0-1 [5644 B] Get: 102 http://deb.debian.org/debian trixie/main arm64 golang-github-zeebo-wyhash-dev all 0.0.1-3 [23.5 kB] -Fetched 104 MB in 1s (95.6 MB/s) +Fetched 104 MB in 1s (136 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19940 files and directories currently installed.) @@ -673,7 +705,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/unikmer-0.19.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../unikmer_0.19.1-1_source.changes +I: user script /srv/workspace/pbuilder/1460847/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/1460847/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/unikmer-0.19.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../unikmer_0.19.1-1_source.changes dpkg-buildpackage: info: source package unikmer dpkg-buildpackage: info: source version 0.19.1-1 dpkg-buildpackage: info: source distribution unstable @@ -693,153 +729,153 @@ dh_auto_build -O--builddirectory=_build -O--buildsystem=golang cd _build && go install -trimpath -v -p 12 github.com/shenwei356/unikmer/unikmer github.com/shenwei356/unikmer/unikmer/cmd internal/unsafeheader -internal/goos -internal/godebugs +internal/goarch unicode/utf8 unicode -sync/atomic -internal/goarch -internal/coverage/rtcov internal/goexperiment +internal/coverage/rtcov +internal/godebugs internal/race -math/bits runtime/internal/syscall +internal/goos +runtime/internal/math +math/bits +internal/chacha8rand internal/cpu -internal/itoa -cmp internal/abi -internal/chacha8rand -runtime/internal/math +sync/atomic runtime/internal/sys +internal/itoa +cmp log/internal internal/nettrace container/list crypto/internal/alias +slices crypto/subtle +math crypto/internal/boring/sig unicode/utf16 -math -slices vendor/golang.org/x/crypto/cryptobyte/asn1 vendor/golang.org/x/crypto/internal/alias encoding -runtime/internal/atomic -internal/bytealg github.com/rivo/uniseg +internal/bytealg +runtime/internal/atomic runtime internal/reflectlite sync internal/testlog -internal/singleflight internal/bisect +internal/singleflight runtime/cgo -errors -io internal/godebug -internal/oserror -internal/safefilepath +errors sort +internal/intern +math/rand +container/heap +internal/safefilepath vendor/golang.org/x/net/dns/dnsmessage -path +internal/oserror +io strconv +path crypto/internal/nistec/fiat -math/rand -internal/intern -syscall bytes -crypto/internal/randutil strings +syscall hash +crypto/internal/randutil hash/crc32 -container/heap reflect -crypto net/netip +crypto crypto/rc4 -github.com/shenwei356/kmers -vendor/golang.org/x/text/transform -github.com/twotwotwo/sorts regexp/syntax net/http/internal/ascii bufio +vendor/golang.org/x/text/transform +github.com/twotwotwo/sorts +github.com/shenwei356/kmers github.com/twotwotwo/sorts/sortutil regexp time -internal/syscall/execenv internal/syscall/unix +internal/syscall/execenv github.com/shenwei356/natsort encoding/binary -io/fs internal/fmtsort -context internal/poll +io/fs +context embed -crypto/internal/edwards25519/field +golang.org/x/sys/unix crypto/cipher +crypto/internal/edwards25519/field +crypto/md5 encoding/base64 vendor/golang.org/x/crypto/internal/poly1305 -crypto/md5 -crypto/internal/nistec github.com/zeebo/wyhash -golang.org/x/sys/unix -os -encoding/pem +crypto/internal/nistec crypto/internal/boring crypto/des vendor/golang.org/x/crypto/chacha20 -crypto/internal/edwards25519 +encoding/pem +os crypto/aes crypto/sha512 crypto/hmac -crypto/sha256 crypto/sha1 +crypto/internal/edwards25519 +crypto/sha256 vendor/golang.org/x/crypto/hkdf vendor/golang.org/x/crypto/chacha20poly1305 crypto/ecdh fmt +net github.com/mattn/go-runewidth -path/filepath io/ioutil -net +path/filepath os/exec -github.com/mitchellh/go-homedir log -encoding/hex compress/flate -net/url -github.com/shenwei356/util/byteutil -vendor/golang.org/x/net/http2/hpack github.com/pkg/errors +net/url math/big +github.com/shenwei356/util/byteutil +github.com/mitchellh/go-homedir vendor/golang.org/x/text/unicode/norm +vendor/golang.org/x/net/http2/hpack +encoding/hex mime mime/quotedprintable -github.com/shenwei356/bio/seq net/http/internal os/user -vendor/golang.org/x/text/unicode/bidi +github.com/shenwei356/bio/seq github.com/will-rowe/nthash github.com/shenwei356/unik/v5 +vendor/golang.org/x/text/unicode/bidi github.com/shenwei356/util/pathutil github.com/shenwei356/util/stringutil encoding/csv -github.com/klauspost/compress/flate -compress/gzip flag text/template/parse github.com/tatsushid/go-prettytable +github.com/klauspost/compress/flate +compress/gzip github.com/shenwei356/bio/sketches vendor/golang.org/x/text/secure/bidirule github.com/mattn/go-isatty github.com/mattn/go-colorable -vendor/golang.org/x/net/idna text/template +vendor/golang.org/x/net/idna github.com/dustin/go-humanize -encoding/asn1 crypto/rand -crypto/internal/bigmod crypto/elliptic +crypto/internal/bigmod crypto/internal/boring/bbig +encoding/asn1 crypto/dsa crypto/ed25519 crypto/rsa @@ -860,8 +896,8 @@ net/http/httptrace net/http github.com/shenwei356/xopen -github.com/shenwei356/bio/taxdump github.com/shenwei356/bio/seqio/fastx +github.com/shenwei356/bio/taxdump github.com/shenwei356/breader github.com/shenwei356/unikmer/unikmer/cmd github.com/shenwei356/unikmer/unikmer @@ -898,8 +934,8 @@ dpkg-gencontrol: warning: package unikmer: substitution variable ${misc:Static-Built-Using} unused, but is defined dh_md5sums -O--builddirectory=_build -O--buildsystem=golang dh_builddeb -O--builddirectory=_build -O--buildsystem=golang -dpkg-deb: building package 'unikmer' in '../unikmer_0.19.1-1_arm64.deb'. dpkg-deb: building package 'unikmer-dbgsym' in '../unikmer-dbgsym_0.19.1-1_arm64.deb'. +dpkg-deb: building package 'unikmer' in '../unikmer_0.19.1-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../unikmer_0.19.1-1_arm64.buildinfo dpkg-genchanges --build=binary -O../unikmer_0.19.1-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -907,12 +943,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1460847/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1460847/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3141793 and its subdirectories -I: Current time: Sat May 31 16:05:48 -12 2025 -I: pbuilder-time-stamp: 1748750748 +I: removing directory /srv/workspace/pbuilder/1460847 and its subdirectories +I: Current time: Mon Apr 29 11:44:57 +14 2024 +I: pbuilder-time-stamp: 1714340697