Diff of the two buildlogs: -- --- b1/build.log 2024-04-22 02:31:42.525991791 +0000 +++ b2/build.log 2024-04-22 02:38:38.520207911 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat May 24 20:51:52 -12 2025 -I: pbuilder-time-stamp: 1748163112 +I: Current time: Sun May 25 22:54:46 +14 2025 +I: pbuilder-time-stamp: 1748163286 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -26,52 +26,84 @@ dpkg-source: info: unpacking quorum_1.1.2-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/762844/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/721175/tmp/hooks/D01_modify_environment starting +debug: Running on codethink01-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 25 08:54 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/721175/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/721175/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='44660c6d471540cd916bd6837683348b' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='762844' - PS1='# ' - PS2='> ' + INVOCATION_ID=e5d2eb864bd74d7a89589c4b2d6e823f + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=721175 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.xsRMMQq9/pbuilderrc_Et0z --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.xsRMMQq9/b1 --logfile b1/build.log quorum_1.1.2-2.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.xsRMMQq9/pbuilderrc_TO1l --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.xsRMMQq9/b2 --logfile b2/build.log quorum_1.1.2-2.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.1.0-20-cloud-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-20-cloud-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 24 13:38 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/762844/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/721175/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -182,7 +214,7 @@ Get: 65 http://deb.debian.org/debian trixie/main arm64 pkgconf arm64 1.8.1-1+b2 [26.2 kB] Get: 66 http://deb.debian.org/debian trixie/main arm64 pkg-config arm64 1.8.1-1+b2 [14.0 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 yaggo all 1.5.11-1 [21.3 kB] -Fetched 29.7 MB in 0s (125 MB/s) +Fetched 29.7 MB in 0s (74.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19930 files and directories currently installed.) @@ -472,7 +504,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/quorum-1.1.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../quorum_1.1.2-2_source.changes +I: user script /srv/workspace/pbuilder/721175/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/721175/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/quorum-1.1.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../quorum_1.1.2-2_source.changes dpkg-buildpackage: info: source package quorum dpkg-buildpackage: info: source version 1.1.2-2 dpkg-buildpackage: info: source distribution unstable @@ -655,16 +691,16 @@ make[2]: Entering directory '/build/reproducible-path/quorum-1.1.2' g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c -o src/error_correct_reads.o src/error_correct_reads.cc g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c -o src/err_log.o src/err_log.cc -/bin/bash ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o quorum_error_correct_reads src/error_correct_reads.o src/err_log.o -ljellyfish-2.0 -lpthread -lrt -lpthread +/bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o quorum_error_correct_reads src/error_correct_reads.o src/err_log.o -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o quorum_error_correct_reads src/error_correct_reads.o src/err_log.o /usr/lib/aarch64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c -o src/create_database.o src/create_database.cc -/bin/bash ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o quorum_create_database src/create_database.o -ljellyfish-2.0 -lpthread -lrt -lpthread +/bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o quorum_create_database src/create_database.o -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o quorum_create_database src/create_database.o /usr/lib/aarch64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c -o src/merge_mate_pairs.o src/merge_mate_pairs.cc -/bin/bash ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o merge_mate_pairs src/merge_mate_pairs.o -ljellyfish-2.0 -lpthread -lrt -lpthread +/bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o merge_mate_pairs src/merge_mate_pairs.o -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o merge_mate_pairs src/merge_mate_pairs.o /usr/lib/aarch64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c -o src/split_mate_pairs.o src/split_mate_pairs.cc -/bin/bash ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o split_mate_pairs src/split_mate_pairs.o -ljellyfish-2.0 -lpthread -lrt -lpthread +/bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o split_mate_pairs src/split_mate_pairs.o -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o split_mate_pairs src/split_mate_pairs.o /usr/lib/aarch64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread sed -e 's|[@]JELLYFISH[@]|/usr/bin/jellyfish|g' -e 's|[@]bindir[@]|/build/reproducible-path/quorum-1.1.2|g' -e 's|[@]JF_LIB_PATH[@]||g' -e 's|[@]PACKAGE_VERSION[@]|1.1.2|g' -e 's|[@]JELLYFISH_VERSION[@]|2.3.1|g' < src/quorum.in > quorum && chmod a+x quorum mkdir -p data; /usr/bin/jellyfish count -m 24 -s 5k -C -t 10 -o data/adapter.jf data/adapter.fa @@ -678,29 +714,29 @@ make all_tests query_mer_database histo_mer_database libgtest.la libgtest_main.la make[3]: Entering directory '/build/reproducible-path/quorum-1.1.2' g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -I./unit_tests/gtest/include -I./unit_tests -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c -o unit_tests/all_tests-test_mer_database.o `test -f 'unit_tests/test_mer_database.cc' || echo './'`unit_tests/test_mer_database.cc -/bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c -o unit_tests/gtest/src/libgtest_main_la-gtest_main.lo `test -f 'unit_tests/gtest/src/gtest_main.cc' || echo './'`unit_tests/gtest/src/gtest_main.cc +/bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c -o unit_tests/gtest/src/libgtest_main_la-gtest_main.lo `test -f 'unit_tests/gtest/src/gtest_main.cc' || echo './'`unit_tests/gtest/src/gtest_main.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c unit_tests/gtest/src/gtest_main.cc -fPIC -DPIC -o unit_tests/gtest/src/.libs/libgtest_main_la-gtest_main.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c unit_tests/gtest/src/gtest_main.cc -o unit_tests/gtest/src/libgtest_main_la-gtest_main.o >/dev/null 2>&1 -/bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c -o unit_tests/gtest/src/libgtest_la-gtest-all.lo `test -f 'unit_tests/gtest/src/gtest-all.cc' || echo './'`unit_tests/gtest/src/gtest-all.cc +/bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c -o unit_tests/gtest/src/libgtest_la-gtest-all.lo `test -f 'unit_tests/gtest/src/gtest-all.cc' || echo './'`unit_tests/gtest/src/gtest-all.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c unit_tests/gtest/src/gtest-all.cc -fPIC -DPIC -o unit_tests/gtest/src/.libs/libgtest_la-gtest-all.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c unit_tests/gtest/src/gtest-all.cc -o unit_tests/gtest/src/libgtest_la-gtest-all.o >/dev/null 2>&1 -/bin/bash ./libtool --tag=CXX --mode=link g++ -I./unit_tests -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o libgtest.la unit_tests/gtest/src/libgtest_la-gtest-all.lo -lrt -lpthread +/bin/sh 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src/query_mer_database.o -ljellyfish-2.0 -lpthread -lrt -lpthread +/bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o query_mer_database src/query_mer_database.o -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o query_mer_database src/query_mer_database.o /usr/lib/aarch64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.1 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -c -o src/histo_mer_database.o src/histo_mer_database.cc -/bin/bash ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o histo_mer_database src/histo_mer_database.o -ljellyfish-2.0 -lpthread -lrt -lpthread +/bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o histo_mer_database src/histo_mer_database.o -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/quorum-1.1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o histo_mer_database src/histo_mer_database.o /usr/lib/aarch64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread make[3]: 'libgtest.la' is up to date. make[3]: 'libgtest_main.la' is up to date. @@ -734,7 +770,7 @@ make[2]: Entering directory '/build/reproducible-path/quorum-1.1.2' make[3]: Entering directory '/build/reproducible-path/quorum-1.1.2' /usr/bin/mkdir -p '/build/reproducible-path/quorum-1.1.2/debian/quorum/usr/bin' - /bin/bash ./libtool --mode=install /usr/bin/install -c quorum_error_correct_reads quorum_create_database merge_mate_pairs split_mate_pairs '/build/reproducible-path/quorum-1.1.2/debian/quorum/usr/bin' + /bin/sh ./libtool --mode=install /usr/bin/install -c quorum_error_correct_reads quorum_create_database merge_mate_pairs split_mate_pairs '/build/reproducible-path/quorum-1.1.2/debian/quorum/usr/bin' libtool: install: /usr/bin/install -c quorum_error_correct_reads /build/reproducible-path/quorum-1.1.2/debian/quorum/usr/bin/quorum_error_correct_reads libtool: install: /usr/bin/install -c quorum_create_database /build/reproducible-path/quorum-1.1.2/debian/quorum/usr/bin/quorum_create_database libtool: install: /usr/bin/install -c merge_mate_pairs /build/reproducible-path/quorum-1.1.2/debian/quorum/usr/bin/merge_mate_pairs @@ -782,12 +818,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/721175/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/721175/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/762844 and its subdirectories -I: Current time: Sat May 24 20:54:41 -12 2025 -I: pbuilder-time-stamp: 1748163281 +I: removing directory /srv/workspace/pbuilder/721175 and its subdirectories +I: Current time: Sun May 25 23:01:37 +14 2025 +I: pbuilder-time-stamp: 1748163697