Diff of the two buildlogs: -- --- b1/build.log 2024-05-06 14:33:00.092381719 +0000 +++ b2/build.log 2024-05-06 14:33:46.822394326 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon May 6 02:32:22 -12 2024 -I: pbuilder-time-stamp: 1715005942 +I: Current time: Tue May 7 04:33:02 +14 2024 +I: pbuilder-time-stamp: 1715005982 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -26,52 +26,84 @@ dpkg-source: info: unpacking python-deeptoolsintervals_0.1.9-3.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/359264/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1387901/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 6 14:33 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1387901/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1387901/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='ce3eb109a4224c3f884c4847f4987da1' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='359264' - PS1='# ' - PS2='> ' + INVOCATION_ID=70229dd4e82e4b6d81a3f7f701289633 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1387901 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.KrSGsHYg/pbuilderrc_XtXk --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.KrSGsHYg/b1 --logfile b1/build.log python-deeptoolsintervals_0.1.9-3.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.KrSGsHYg/pbuilderrc_BUeY --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.KrSGsHYg/b2 --logfile b2/build.log python-deeptoolsintervals_0.1.9-3.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink02-arm64 6.1.0-20-cloud-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-20-cloud-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 6 11:24 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/359264/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 5 11:23 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1387901/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -183,7 +215,7 @@ Get: 66 http://deb.debian.org/debian trixie/main arm64 python3-dev arm64 3.11.8-1 [26.1 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 python3.12-dev arm64 3.12.3-1 [499 kB] Get: 68 http://deb.debian.org/debian trixie/main arm64 python3-all-dev arm64 3.11.8-1 [1072 B] -Fetched 46.3 MB in 0s (171 MB/s) +Fetched 46.3 MB in 0s (190 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19743 files and directories currently installed.) @@ -416,8 +448,8 @@ Setting up tzdata (2024a-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon May 6 14:32:39 UTC 2024. -Universal Time is now: Mon May 6 14:32:39 UTC 2024. +Local time is now: Mon May 6 14:33:20 UTC 2024. +Universal Time is now: Mon May 6 14:33:20 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... @@ -483,7 +515,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/python-deeptoolsintervals-0.1.9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-deeptoolsintervals_0.1.9-3_source.changes +I: user script /srv/workspace/pbuilder/1387901/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/1387901/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-deeptoolsintervals-0.1.9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-deeptoolsintervals_0.1.9-3_source.changes dpkg-buildpackage: info: source package python-deeptoolsintervals dpkg-buildpackage: info: source version 0.1.9-3 dpkg-buildpackage: info: source distribution unstable @@ -868,7 +904,7 @@ Ran 0 tests in 0.000s OK - rm -fr -- /tmp/dh-xdg-rundir-GRW5ytgO + rm -fr -- /tmp/dh-xdg-rundir-dqgM9qPn create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild @@ -1207,8 +1243,8 @@ dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild Using 1595335582 as canonical time - Normalizing debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/test/GRCh38.84.2.gtf.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/test/GRCh38.84.gtf.gz using File::StripNondeterminism::handlers::gzip + Normalizing debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/test/GRCh38.84.2.gtf.gz using File::StripNondeterminism::handlers::gzip dh_compress -O--buildsystem=pybuild cd debian/python3-deeptoolsintervals chmod a-x usr/share/doc/python3-deeptoolsintervals/changelog.Debian @@ -1227,16 +1263,16 @@ objcopy --compress-debug-sections debian/python3-deeptoolsintervals/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-deeptoolsintervals.debug chmod 0644 -- debian/python3-deeptoolsintervals/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-deeptoolsintervals.debug dh_strip -a -O--buildsystem=pybuild - install -m0755 -d debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.build-id/bb - objcopy --only-keep-debug --compress-debug-sections debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-311-aarch64-linux-gnu.so debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.build-id/bb/d25ff5273a68aa0bb1e24b022d6cb2b4d31539.debug - chmod 0644 -- debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.build-id/bb/d25ff5273a68aa0bb1e24b022d6cb2b4d31539.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-311-aarch64-linux-gnu.so - objcopy --add-gnu-debuglink debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.build-id/bb/d25ff5273a68aa0bb1e24b022d6cb2b4d31539.debug debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-311-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.build-id/e3 objcopy --only-keep-debug --compress-debug-sections debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.build-id/e3/7956f4f8af180b421322344d3a9beaf68f3f2a.debug chmod 0644 -- debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.build-id/e3/7956f4f8af180b421322344d3a9beaf68f3f2a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.build-id/e3/7956f4f8af180b421322344d3a9beaf68f3f2a.debug debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-312-aarch64-linux-gnu.so + install -m0755 -d debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.build-id/bb + objcopy --only-keep-debug --compress-debug-sections debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-311-aarch64-linux-gnu.so debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.build-id/bb/d25ff5273a68aa0bb1e24b022d6cb2b4d31539.debug + chmod 0644 -- debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.build-id/bb/d25ff5273a68aa0bb1e24b022d6cb2b4d31539.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-311-aarch64-linux-gnu.so + objcopy --add-gnu-debuglink debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.build-id/bb/d25ff5273a68aa0bb1e24b022d6cb2b4d31539.debug debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-311-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-deeptoolsintervals/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-deeptoolsintervals/usr/lib/debug/.dwz @@ -1248,7 +1284,7 @@ rm -f debian/python3-deeptoolsintervals/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -m0755 -d debian/python3-deeptoolsintervals/DEBIAN - dpkg-shlibdeps -Tdebian/python3-deeptoolsintervals.substvars debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-311-aarch64-linux-gnu.so debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-312-aarch64-linux-gnu.so + dpkg-shlibdeps -Tdebian/python3-deeptoolsintervals.substvars debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-312-aarch64-linux-gnu.so debian/python3-deeptoolsintervals/usr/lib/python3/dist-packages/deeptoolsintervals/tree.cpython-311-aarch64-linux-gnu.so dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/python3-deeptoolsintervals/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-deeptoolsintervals/DEBIAN/postinst @@ -1274,8 +1310,8 @@ cd debian/.debhelper/python3-deeptoolsintervals/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-deeptoolsintervals/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild - dpkg-deb --root-owner-group --build debian/.debhelper/python3-deeptoolsintervals/dbgsym-root .. dpkg-deb --root-owner-group --build debian/python3-deeptoolsintervals .. + dpkg-deb --root-owner-group --build debian/.debhelper/python3-deeptoolsintervals/dbgsym-root .. dpkg-deb: building package 'python3-deeptoolsintervals' in '../python3-deeptoolsintervals_0.1.9-3_arm64.deb'. dpkg-deb: building package 'python3-deeptoolsintervals-dbgsym' in '../python3-deeptoolsintervals-dbgsym_0.1.9-3_arm64.deb'. dpkg-genbuildinfo --build=binary -O../python-deeptoolsintervals_0.1.9-3_arm64.buildinfo @@ -1286,12 +1322,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1387901/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1387901/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/359264 and its subdirectories -I: Current time: Mon May 6 02:32:59 -12 2024 -I: pbuilder-time-stamp: 1715005979 +I: removing directory /srv/workspace/pbuilder/1387901 and its subdirectories +I: Current time: Tue May 7 04:33:45 +14 2024 +I: pbuilder-time-stamp: 1715006025