Diff of the two buildlogs: -- --- b1/build.log 2024-12-15 08:58:33.871801979 +0000 +++ b2/build.log 2024-12-15 09:05:31.604837437 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Dec 14 20:52:14 -12 2024 -I: pbuilder-time-stamp: 1734252734 +I: Current time: Sun Jan 18 05:21:36 +14 2026 +I: pbuilder-time-stamp: 1768663296 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -36,52 +36,84 @@ dpkg-source: info: applying fixup-strict-digraph-test.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3845240/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/458042/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 17 15:21 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/458042/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/458042/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='e1b0a826ada64fe0b22d39f3c59b13b7' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3845240' - PS1='# ' - PS2='> ' + INVOCATION_ID=5dd7b0b049e74e85987717d198627e0c + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=458042 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.TZKuQTQj/pbuilderrc_U1a0 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.TZKuQTQj/b1 --logfile b1/build.log nipype_1.9.0-1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.TZKuQTQj/pbuilderrc_7Rb4 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.TZKuQTQj/b2 --logfile b2/build.log nipype_1.9.0-1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink02-arm64 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3845240/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/458042/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -467,7 +499,7 @@ Get: 284 http://deb.debian.org/debian trixie/main arm64 python3-simplejson arm64 3.19.3-1+b1 [60.4 kB] Get: 285 http://deb.debian.org/debian trixie/main arm64 python3-sphinxcontrib.apidoc all 0.3.0-5 [7796 B] Get: 286 http://deb.debian.org/debian trixie/main arm64 python3-traits arm64 6.4.3-2+b1 [4812 kB] -Fetched 145 MB in 1s (118 MB/s) +Fetched 145 MB in 1s (203 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20082 files and directories currently installed.) @@ -1383,8 +1415,8 @@ Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Sun Dec 15 08:52:52 UTC 2024. -Universal Time is now: Sun Dec 15 08:52:52 UTC 2024. +Local time is now: Sat Jan 17 15:22:16 UTC 2026. +Universal Time is now: Sat Jan 17 15:22:16 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... @@ -1656,7 +1688,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/nipype-1.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../nipype_1.9.0-1_source.changes +I: user script /srv/workspace/pbuilder/458042/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/458042/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/nipype-1.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../nipype_1.9.0-1_source.changes dpkg-buildpackage: info: source package nipype dpkg-buildpackage: info: source version 1.9.0-1 dpkg-buildpackage: info: source distribution unstable @@ -1701,8 +1737,8 @@ Usage of dash-separated 'python-tag' will not be supported in future versions. Please use the underscore name 'python_tag' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -5466,7 +5502,7 @@ Copying nipype.egg-info to build/bdist.linux-aarch64/wheel/./nipype-1.9.0.egg-info running install_scripts creating build/bdist.linux-aarch64/wheel/nipype-1.9.0.dist-info/WHEEL -creating '/build/reproducible-path/nipype-1.9.0/.pybuild/cpython3_3.12_nipype/.tmp-5k1ub5cv/nipype-1.9.0-py3-none-any.whl' and adding 'build/bdist.linux-aarch64/wheel' to it +creating '/build/reproducible-path/nipype-1.9.0/.pybuild/cpython3_3.12_nipype/.tmp-_tpfwz7h/nipype-1.9.0-py3-none-any.whl' and adding 'build/bdist.linux-aarch64/wheel' to it adding 'nipype/COMMIT_INFO.txt' adding 'nipype/__init__.py' adding 'nipype/conftest.py' @@ -7599,23 +7635,23 @@ reading sources... [ 19%] api/generated/nipype.interfaces.diffusion_toolkit.odf reading sources... [ 19%] api/generated/nipype.interfaces.diffusion_toolkit.postproc reading sources... [ 20%] api/generated/nipype.interfaces.dipy -241214-20:54:20,134 nipype.interface INFO: +260118-05:23:54,596 nipype.interface INFO: We advise you to upgrade DIPY version. This upgrade will open access to more function -241214-20:54:20,140 nipype.interface INFO: +260118-05:23:54,601 nipype.interface INFO: We advise you to upgrade DIPY version. This upgrade will open access to more function -241214-20:54:20,143 nipype.interface INFO: +260118-05:23:54,605 nipype.interface INFO: We advise you to upgrade DIPY version. This upgrade will open access to more models reading sources... [ 20%] api/generated/nipype.interfaces.dipy.anisotropic_power reading sources... [ 20%] api/generated/nipype.interfaces.dipy.base reading sources... [ 20%] api/generated/nipype.interfaces.dipy.preprocess reading sources... [ 21%] api/generated/nipype.interfaces.dipy.reconstruction reading sources... [ 21%] api/generated/nipype.interfaces.dipy.registration -241214-20:54:20,424 nipype.interface INFO: +260118-05:23:54,895 nipype.interface INFO: We advise you to upgrade DIPY version. This upgrade will open access to more function reading sources... [ 21%] api/generated/nipype.interfaces.dipy.setup reading sources... [ 22%] api/generated/nipype.interfaces.dipy.simulate reading sources... [ 22%] api/generated/nipype.interfaces.dipy.stats -241214-20:54:20,476 nipype.interface INFO: +260118-05:23:54,951 nipype.interface INFO: We advise you to upgrade DIPY version. This upgrade will open access to more function reading sources... [ 22%] api/generated/nipype.interfaces.dipy.tensors reading sources... [ 23%] api/generated/nipype.interfaces.dipy.tracks @@ -21218,15 +21254,15 @@ container = ConjunctiveGraph(identifier=identifier) pipeline/plugins/tests/test_callback.py: 12 warnings - /usr/lib/python3.12/multiprocessing/popen_fork.py:66: DeprecationWarning: This process (pid=3884112) is multi-threaded, use of fork() may lead to deadlocks in the child. + /usr/lib/python3.12/multiprocessing/popen_fork.py:66: DeprecationWarning: This process (pid=492958) is multi-threaded, use of fork() may lead to deadlocks in the child. self.pid = os.fork() utils/tests/test_misc.py::test_rgetcwd - /build/reproducible-path/nipype-1.9.0/nipype/utils/misc.py:364: UserWarning: Current folder does not exist, replacing with "/tmp/pytest-of-pbuilder1/pytest-0/test_rgetcwd0" instead. + /build/reproducible-path/nipype-1.9.0/nipype/utils/misc.py:364: UserWarning: Current folder does not exist, replacing with "/tmp/pytest-of-pbuilder2/pytest-0/test_rgetcwd0" instead. warn('Current folder does not exist, replacing with "%s" instead.' % cwd) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html -= 2736 passed, 267 skipped, 1 deselected, 5 xfailed, 84 warnings in 145.92s (0:02:25) = += 2736 passed, 267 skipped, 1 deselected, 5 xfailed, 84 warnings in 149.72s (0:02:29) = : # no executable spreadsheets find debian -iname *csv -print0 | xargs -r -0 chmod a-x make[1]: Leaving directory '/build/reproducible-path/nipype-1.9.0' @@ -21278,8 +21314,8 @@ dpkg-gencontrol: warning: Provides field of package python3-nipype: substitution variable ${python3:Provides} used, but is not defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild -dpkg-deb: building package 'python-nipype-doc' in '../python-nipype-doc_1.9.0-1_all.deb'. dpkg-deb: building package 'python3-nipype' in '../python3-nipype_1.9.0-1_all.deb'. +dpkg-deb: building package 'python-nipype-doc' in '../python-nipype-doc_1.9.0-1_all.deb'. dpkg-genbuildinfo --build=binary -O../nipype_1.9.0-1_arm64.buildinfo dpkg-genchanges --build=binary -O../nipype_1.9.0-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -21288,12 +21324,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/458042/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/458042/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3845240 and its subdirectories -I: Current time: Sat Dec 14 20:58:29 -12 2024 -I: pbuilder-time-stamp: 1734253109 +I: removing directory /srv/workspace/pbuilder/458042 and its subdirectories +I: Current time: Sun Jan 18 05:28:29 +14 2026 +I: pbuilder-time-stamp: 1768663709