Diff of the two buildlogs: -- --- b1/build.log 2024-11-06 04:25:30.576710557 +0000 +++ b2/build.log 2024-11-06 05:12:32.468274285 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Dec 8 22:14:38 -12 2025 -I: pbuilder-time-stamp: 1765275278 +I: Current time: Wed Nov 6 18:26:14 +14 2024 +I: pbuilder-time-stamp: 1730867174 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -48,52 +48,84 @@ dpkg-source: info: applying big_endian_workaround I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1173027/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3845928/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 6 04:26 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3845928/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3845928/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='6aed87e463c3408bb944971f22c837b1' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1173027' - PS1='# ' - PS2='> ' + INVOCATION_ID=ff8438ac5ce243c8aaed126877e11148 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3845928 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.0sjpR6rE/pbuilderrc_fmrB --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.0sjpR6rE/b1 --logfile b1/build.log ncbi-blast+_2.16.0+ds-6.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.0sjpR6rE/pbuilderrc_BCeb --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.0sjpR6rE/b2 --logfile b2/build.log ncbi-blast+_2.16.0+ds-6.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.1.0-26-cloud-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-26-cloud-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/1173027/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3845928/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -223,7 +255,7 @@ Get: 66 http://deb.debian.org/debian trixie/main arm64 libuv1-dev arm64 1.48.0-6 [181 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 time arm64 1.9-0.2+b1 [48.1 kB] Get: 68 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] -Fetched 43.1 MB in 0s (105 MB/s) +Fetched 43.1 MB in 0s (193 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20089 files and directories currently installed.) @@ -510,7 +542,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ncbi-blast+_2.16.0+ds-6_source.changes +I: user script /srv/workspace/pbuilder/3845928/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/3845928/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ncbi-blast+_2.16.0+ds-6_source.changes dpkg-buildpackage: info: source package ncbi-blast+ dpkg-buildpackage: info: source version 2.16.0+ds-6 dpkg-buildpackage: info: source distribution unstable @@ -541,79 +577,79 @@ done ) ; \ ) ; \ done -/bin/sh: 2: cd: can't cd to c++/src/objects/CMakeLists.txt -/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in -/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd -/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found +/bin/sh: line 2: cd: c++/src/objects/CMakeLists.txt: Not a directory +/bin/sh: line 2: cd: c++/src/objects/Makefile.in: Not a directory +/bin/sh: line 2: cd: c++/src/objects/Makefile.sources: Not a directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 2: cd: c++/src/objects/nt_sources.cmd: Not a directory +/bin/sh: line 2: cd: c++/src/objects/nt_sources.sh: Not a directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory make[1]: [debian/rules:178: override_dh_clean] Error 127 (ignored) for x in c++/src/objtools/eutils/* ; do \ (cd "$x" && ( \ @@ -624,23 +660,23 @@ done ) ; \ ) ; \ done -/bin/sh: 2: cd: can't cd to c++/src/objtools/eutils/CMakeLists.txt -/bin/sh: 2: cd: can't cd to c++/src/objtools/eutils/Makefile.in -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found +/bin/sh: line 2: cd: c++/src/objtools/eutils/CMakeLists.txt: Not a directory +/bin/sh: line 2: cd: c++/src/objtools/eutils/Makefile.in: Not a directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory make[1]: [debian/rules:179: override_dh_clean] Error 127 (ignored) cd c++/src/objtools/eutils/efetch && \ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --xsd efetch purge_sources -/bin/sh: 2: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found +/bin/sh: line 2: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory make[1]: [debian/rules:180: override_dh_clean] Error 127 (ignored) rm -rf c++/compilers/dll c++/config.log c++/Makefile rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module @@ -1866,398 +1902,396 @@ make[3]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' make[3]: warning: -j12 forced in submake: resetting jobserver mode. cd corelib/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd util/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +cd util/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd serial/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +cd serial/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd serial/datatool/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +cd util/tables/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd util/tables/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +cd algo/blast/core/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +cd util/sequtil/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -cd algo/blast/core/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +cd objtools/blast/services/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. -cd util/sequtil/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -cd objtools/blast/services/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' cd db/sqlite/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -cd objmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +cd objmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `flag-stamps'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `flag-stamps'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -/usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' /usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -/usr/bin/make[4] (Makefile.sqlitewrapp.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.sqlitewrapp.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +/usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -/usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' cd objtools/logging/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/readers/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.logging.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +cd objtools/readers/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make[4] (Makefile.logging.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' cd objmgr/util/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' cd objtools/seqmasks_io/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. cd util/profile/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `flag-stamps'. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' cd algo/blast/dbindex/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/dustmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -cd algo/winmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +cd algo/dustmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -/usr/bin/make[4] (Makefile.xxconnect2.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +cd algo/winmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +cd objtools/alnmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +/usr/bin/make[4] (Makefile.xxconnect2.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -2265,611 +2299,618 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `flag-stamps'. -/usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'. -cd objtools/alnmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.utrtprof.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +/usr/bin/make[4] (Makefile.utrtprof.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `flag-stamps'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=cserial -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=cserial -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `flag-stamps'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `flag-stamps'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +/usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' cd algo/blast/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `flag-stamps'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connssl -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connssl -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjread -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' cd util/compress/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +cd connect/services/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -cd connect/services/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api TMPL=xblast -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -/usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'. -cd cgi/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api TMPL=xblast -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +/usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -/usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +cd cgi/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connect -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' /usr/bin/make[4] (Makefile.psg_client.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.xconnserv.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +/usr/bin/make[4] (Makefile.xconnserv.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connect -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjreadex -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' /usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd html/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjreadex -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +cd html/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/make[4] (Makefile.ncbi_xcache_netcache.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.ncbi_xcache_netcache.lib): Nothing to be done for `export-headers'. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/FASTCGIPP.enabled', needed by 'requirements'. Stop. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -w -j12 --jobserver-auth=7,8 flag-stamps -NOTE: skipping project "fcgi_mt" due to unmet requirements +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/make[4] (Makefile.ncbi_xblobstorage_netcache.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/FASTCGIPP.enabled', needed by 'requirements'. Stop. +/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +NOTE: skipping project "fcgi_mt" due to unmet requirements +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'. -cd objtools/align_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.ncbi_xblobstorage_netcache.lib): Nothing to be done for `export-headers'. -cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +cd objtools/align_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -cd connect/ext/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +cd connect/ext/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +cd algo/blast/blastinput/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -cd algo/blast/blastinput/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +cd objtools/eutils/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -cd objtools/eutils/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=xconnserv -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -cd algo/blast/proteinkmer/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=xconnserv -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +cd algo/blast/proteinkmer/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.connext.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +/usr/bin/make[4] (Makefile.eutils.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +cd util/xregexp/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.eutils.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' /usr/bin/make[4] (Makefile.xconnext.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +/usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -cd util/xregexp/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' @@ -2877,323 +2918,318 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xcache_netcache -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `flag-stamps'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' cd objtools/edit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xcache_netcache -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=connext -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=fcgi -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -cd objtools/cleanup/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +cd objtools/cleanup/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=connext -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `flag-stamps'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=fcgi -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' cd objtools/format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +cd algo/blast/format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/make[4] (Makefile.edit.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -cd algo/blast/format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -/usr/bin/make[4] (Makefile.edit.lib): Nothing to be done for `export-headers'. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `flag-stamps'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +cd algo/blast/igblast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +/usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xblobstorage_netcache -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `flag-stamps'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/FASTCGIPP.enabled', needed by 'requirements'. Stop. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' NOTE: skipping project "fcgi_mt" due to unmet requirements -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xblobstorage_netcache -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -w -j12 --jobserver-auth=7,8 flag-stamps -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -cd algo/blast/igblast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format TMPL=xblastformat -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/simple/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +cd objtools/simple/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -/usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -3201,535 +3237,547 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +/usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -w -j12 --jobserver-auth=7,8 flag-stamps +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' cd app/dustmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +cd algo/segmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +/usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'. make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -cd algo/segmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/segmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +cd app/segmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. cd app/winmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -w -j12 --jobserver-auth=7,8 flag-stamps -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/legacy_blast.pl +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -cd objmgr/split/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +cd objmgr/split/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all cd objtools/align_format/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/legacy_blast.pl -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -w -j12 --jobserver-auth=7,8 flag-stamps make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/update_blastdb.pl +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker -w -j12 --jobserver-auth=9,10 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker -w -j12 --jobserver-auth=9,10 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/windowmasker_2.2.22_adapter.py make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/update_blastdb.pl +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/get_species_taxids.sh make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -w -j12 --jobserver-auth=7,8 flag-stamps make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/get_species_taxids.sh +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/cleanup-blastdb-volumes.py make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -cd corelib/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd corelib/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j12 --jobserver-auth=7,8 all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. cd util/tables/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/cleanup-blastdb-volumes.py -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd util/sequtil/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +cd util/sequtil/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefixmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd db/sqlite/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sqlitewrapp UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefixmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -w -j12 --jobserver-auth=7,8 all /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c:137:1: warning: 's_CompoHeapIsValid' defined but not used [-Wunused-function] 137 | s_CompoHeapIsValid(BlastCompo_HeapRecord * heapArray, int i, int n) | ^~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +cd db/sqlite/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sqlitewrapp UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/.#lock-map. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objtools/logging/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=logging UNIX_PROJ="" sources= configurables=configurables.null -/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_cmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -ommon per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/.#lock-map. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function] 200 | s_DistinctAlignmentsLength(BlastCompo_Alignment * list) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function] 185 | s_AlignmentsAreSorted(BlastCompo_Alignment * alignments) | ^~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -cd util/profile/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=utrtprof UNIX_PROJ="" sources= configurables=configurables.null -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -w -j12 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil.cpp -o sequtil.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.h:39, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -3744,25 +3792,40 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_types.c -o ncbi_types.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core.c -o ncbi_core.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedmake[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:37: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] 171 | } | ^ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -w -j12 --jobserver-auth=7,8 all In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core.c:34: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] 171 | } | ^ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:37: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c: In function 'LBSM_LookupService': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:120:9: note: in expansion of macro 'CORE_LOG_X' + 120 | CORE_LOG_X(1, eLOG_Error, "Invalid preceding entry in service lookup"); + | ^~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -w -j12 --jobserver-auth=7,8 all In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c: In function 's_Shmem_Lock': @@ -3903,6 +3966,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:358:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 358 | CORE_LOGF_ERRNO_X(24, eLOG_Critical, error, | ^~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c: In function 'LBSM_Shmem_Attach': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -3950,14 +4014,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:457:9: note: in expansion of macro 'CORE_LOGF_X' 457 | CORE_LOGF_X(12, eLOG_Critical, | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -w -j12 --jobserver-auth=7,8 flag-stamps -antic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.c -o ncbi_priv.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c -o ncbi_util.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c -o ncbi_socket.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c -o ncbi_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c -o ncbi_connection.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c: In function 'LBSM_Shmem_Create': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c: In function 'LBSM_Shmem_Create': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4019,6 +4076,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:549:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 549 | CORE_LOGF_ERRNO_X(14, eLOG_Error, error, | ^~~~~~~~~~~~~~~~~ +antic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.c -o ncbi_priv.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c -o ncbi_util.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c -o ncbi_socket.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c -o ncbi_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c -o ncbi_connection.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4065,7 +4129,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:629:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 629 | CORE_LOGF_ERRNO_X(22, pid ? eLOG_Error : eLOG_Warning, errno, | ^~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4076,23 +4139,23 @@ 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, make[5]: warning: -j12 forced in submake: resetting jobserver mode. - \ + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:647:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 647 | CORE_LOGF_ERRNO_X(21, eLOG_Warning, errno, | ^~~~~~~~~~~~~~~~~ -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil.cpp -o sequtil.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:37: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c: In function 'LBSM_LookupService': -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:77: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:34: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4102,13 +4165,37 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:120:9: note: in expansion of macro 'CORE_LOG_X' - 120 | CORE_LOG_X(1, eLOG_Error, "Invalid preceding entry in service lookup"); - | ^~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' + 41 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG' + 63 | METACONN_LOG(34, eLOG_Error, + | ^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' + 41 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG' + 92 | METACONN_LOG(33, connector->next ? eLOG_Error : eLOG_Critical, + | ^~~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c:34: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c: In function 'CORE_SetLOGFILE_NAME_Ex': @@ -4127,9 +4214,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c:168:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 168 | CORE_LOGF_ERRNO_X(1, eLOG_Error, errno, | ^~~~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +cd util/profile/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=utrtprof UNIX_PROJ="" sources= configurables=configurables.null +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:34: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove': + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_DoLog': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4142,13 +4238,39 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' - 41 | CORE_LOGF_X(subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:570:9: note: in expansion of macro 'CORE_LOGF_X' + 570 | CORE_LOGF_X(112, level, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' + 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' + 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:609:9: note: in expansion of macro 'CORE_DATAF_X' + 609 | CORE_DATAF_X(109, level, data, size, + | ^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG' - 63 | METACONN_LOG(34, eLOG_Error, - | ^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:641:9: note: in expansion of macro 'CORE_LOGF_X' + 641 | CORE_LOGF_X(113, level, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4161,37 +4283,159 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' - 41 | CORE_LOGF_X(subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:649:9: note: in expansion of macro 'CORE_LOGF_X' + 649 | CORE_LOGF_X(1, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Init': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 163 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:885:13: note: in expansion of macro 'CORE_LOG_ERRNO_X' + 885 | CORE_LOG_ERRNO_X(161, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~ +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:952:32: warning: format '%p' expects argument of type 'void *', but argument 3 has type 'FSSLSetup' {aka 'const struct SOCKSSL_struct * (*)(void)'} [-Wformat=] + 952 | sprintf(buf, "%p()", s_SSLSetup); + | ~^ ~~~~~~~~~~ + | | | + | | FSSLSetup {aka const struct SOCKSSL_struct * (*)(void)} + | void * +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG' - 92 | METACONN_LOG(33, connector->next ? eLOG_Error : eLOG_Critical, - | ^~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:77: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:37: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h: At top level: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:956:13: note: in expansion of macro 'CORE_LOGF' + 956 | CORE_LOGF(eLOG_Critical, + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' + 155 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:963:13: note: in expansion of macro 'CORE_LOG' + 963 | CORE_LOG(eLOG_Critical, "Secure Socket Layer (SSL) has not" + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostname': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 179 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1121:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' + 1121 | CORE_LOG_ERRNO_EXX(103, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1130:13: note: in expansion of macro 'CORE_LOGF_X' + 1130 | CORE_LOGF_X(104, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1138:13: note: in expansion of macro 'CORE_LOGF_X' + 1138 | CORE_LOGF_X(162, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1315:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 1315 | CORE_LOGF_ERRNO_EXX(106, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1354:9: note: in expansion of macro 'CORE_LOGF_X' + 1354 | CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~ make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1384:9: note: in expansion of macro 'CORE_LOGF_X' + 1384 | CORE_LOGF_X(155, eLOG_Warning, + | ^~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:34: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'x_ReInit': @@ -4216,6 +4460,22 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:289:13: note: in expansion of macro 'CONN_LOG' 289 | CONN_LOG(4, ReInit, eLOG_Critical, "Partial re-init not allowed"); | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1516:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 1516 | CORE_LOGF_ERRNO_EXX(108, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4237,9 +4497,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:318:21: note: in expansion of macro 'CONN_LOG' 318 | CONN_LOG(3, Close, | ^~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'x_SetupHttpProxy': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4273,9 +4531,41 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:554:9: note: in expansion of macro 'CORE_LOGF_X' - 554 | CORE_LOGF_X(10, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1551:9: note: in expansion of macro 'CORE_LOGF_X' + 1551 | CORE_LOGF_X(10, eLOG_Warning, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_ApproveCallback': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1604:13: note: in expansion of macro 'CORE_LOGF_X' + 1604 | CORE_LOGF_X(163, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1766:13: note: in expansion of macro 'CORE_LOGF_X' + 1766 | CORE_LOGF_X(111, eLOG_Trace, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 's_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -4320,23 +4610,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:447:9: note: in expansion of macro 'CONN_LOG' 447 | CONN_LOG(2, Create, eLOG_Error, "NULL connector"); | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_CreateInternal': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_ReInit': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:745:9: note: in expansion of macro 'CORE_LOGF_X' - 745 | CORE_LOGF_X(11, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Select_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4385,7 +4660,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:469:5: note: in expansion of macro 'CONN_NOT_NULL' 469 | CONN_NOT_NULL(1, ReInit); | ^~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -w -j12 --jobserver-auth=7,8 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1879:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1879 | CORE_LOGF_ERRNO_X(145, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_GetType': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -4429,6 +4718,61 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro 'CONN_NOT_NULL_EX' 477 | CONN_NOT_NULL_EX(6, GetType, 0); | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2003:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 2003 | CORE_LOGF_ERRNO_EXX(5, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Poll_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2157:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2157 | CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:37: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h: At top level: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2289:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 2289 | CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Description': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -4527,29 +4871,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:822:13: note: in expansion of macro 'CORE_LOGF_X' - 822 | CORE_LOGF_X(12, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' 72 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:511:9: note: in expansion of macro 'CONN_LOG_EX' 511 | CONN_LOG_EX(31, GetPosition, eLOG_Error, errbuf, 0); | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_SetTimeout': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -4706,6 +5034,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2850:13: note: in expansion of macro 'CORE_LOGF' + 2850 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ @@ -4727,6 +5070,102 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2860:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 2860 | CORE_LOGF_ERRNO_EXX(6, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2898:25: note: in expansion of macro 'CORE_LOGF' + 2898 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Recv': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3054:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3054 | CORE_LOGF_ERRNO_EXX(7, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'x_SetupHttpProxy': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:554:9: note: in expansion of macro 'CORE_LOGF_X' + 554 | CORE_LOGF_X(10, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Read_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_CreateInternal': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3238:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 3238 | CORE_LOGF_ERRNO_X(8, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:745:9: note: in expansion of macro 'CORE_LOGF_X' + 745 | CORE_LOGF_X(11, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -4810,7 +5249,12 @@ 735 | CONN_LOG(17, Write, level, "Unable to write data"); | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Write': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c -o ncbi_service.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -4834,39 +5278,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro 'CONN_NOT_NULL' 784 | CONN_NOT_NULL(18, Write); | ^~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_DoLog': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:570:9: note: in expansion of macro 'CORE_LOGF_X' - 570 | CORE_LOGF_X(112, level, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' - 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' - 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:609:9: note: in expansion of macro 'CORE_DATAF_X' - 609 | CORE_DATAF_X(109, level, data, size, - | ^~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4879,25 +5290,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:641:9: note: in expansion of macro 'CORE_LOGF_X' - 641 | CORE_LOGF_X(113, level, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:649:9: note: in expansion of macro 'CORE_LOGF_X' - 649 | CORE_LOGF_X(1, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Init': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:822:13: note: in expansion of macro 'CORE_LOGF_X' + 822 | CORE_LOGF_X(12, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Send': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4931,20 +5327,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 163 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:885:13: note: in expansion of macro 'CORE_LOG_ERRNO_X' - 885 | CORE_LOG_ERRNO_X(161, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3615:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3615 | CORE_LOGF_ERRNO_EXX(11, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Pushback': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:952:32: warning: format '%p' expects argument of type 'void *', but argument 3 has type 'FSSLSetup' {aka 'const struct SOCKSSL_struct * (*)(void)'} [-Wformat=] - 952 | sprintf(buf, "%p()", s_SSLSetup); - | ~^ ~~~~~~~~~~ - | | | - | | FSSLSetup {aka const struct SOCKSSL_struct * (*)(void)} - | void * /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4978,21 +5367,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:956:13: note: in expansion of macro 'CORE_LOGF' - 956 | CORE_LOGF(eLOG_Critical, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ @@ -5008,23 +5382,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:818:5: note: in expansion of macro 'CONN_NOT_NULL' 818 | CONN_NOT_NULL(19, Pushback); | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_WritePending': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Flush': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' - 155 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:963:13: note: in expansion of macro 'CORE_LOG' - 963 | CORE_LOG(eLOG_Critical, "Secure Socket Layer (SSL) has not" - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Flush': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostname': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3780:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3780 | CORE_LOGF_ERRNO_EXX(12, sock->log != eOff + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Write_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5058,12 +5433,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 179 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1121:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' - 1121 | CORE_LOG_ERRNO_EXX(103, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3846:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 3846 | CORE_LOGF_ERRNO_X(154, eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5100,100 +5475,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1130:13: note: in expansion of macro 'CORE_LOGF_X' - 1130 | CORE_LOGF_X(104, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1138:13: note: in expansion of macro 'CORE_LOGF_X' - 1138 | CORE_LOGF_X(162, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1315:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 1315 | CORE_LOGF_ERRNO_EXX(106, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1354:9: note: in expansion of macro 'CORE_LOGF_X' - 1354 | CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1384:9: note: in expansion of macro 'CORE_LOGF_X' - 1384 | CORE_LOGF_X(155, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1516:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 1516 | CORE_LOGF_ERRNO_EXX(108, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' 72 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ @@ -5225,22 +5506,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:877:9: note: in expansion of macro 'CONN_LOG' 877 | CONN_LOG(22, Read, eLOG_Critical, "Cannot read data"); | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1551:9: note: in expansion of macro 'CORE_LOGF_X' - 1551 | CORE_LOGF_X(10, eLOG_Warning, - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5259,7 +5524,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:919:17: note: in expansion of macro 'CONN_LOG_EX' 919 | CONN_LOG_EX(32, Read, eLOG_Critical, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_ApproveCallback': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Shutdown': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5272,41 +5537,48 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1604:13: note: in expansion of macro 'CORE_LOGF_X' - 1604 | CORE_LOGF_X(163, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3962:21: note: in expansion of macro 'CORE_LOGF_X' + 3962 | CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec) + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' - 72 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:83:39: note: in expansion of macro 'CONN_LOG_EX' - 83 | #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:946:13: note: in expansion of macro 'CONN_LOG' - 946 | CONN_LOG(23, Read, level, "Unable to read data"); - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3998:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3998 | CORE_LOGF_ERRNO_EXX(127, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.h:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c:33: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:137:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 137 | LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2140:9: note: in expansion of macro 'LOG_WRITE' - 2140 | LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4049:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4049 | CORE_LOGF_ERRNO_EXX(16, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5319,26 +5591,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1766:13: note: in expansion of macro 'CORE_LOGF_X' - 1766 | CORE_LOGF_X(111, eLOG_Trace, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Select_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1879:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1879 | CORE_LOGF_ERRNO_X(145, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' + 72 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:83:39: note: in expansion of macro 'CONN_LOG_EX' + 83 | #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:946:13: note: in expansion of macro 'CONN_LOG' + 946 | CONN_LOG(23, Read, level, "Unable to read data"); + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Read': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Close_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5387,7 +5650,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1003:5: note: in expansion of macro 'CONN_NOT_NULL' 1003 | CONN_NOT_NULL(24, Read); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_ReadLine': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5400,9 +5662,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2003:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 2003 | CORE_LOGF_ERRNO_EXX(5, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4130:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4130 | CORE_LOGF_ERRNO_EXX(17, eLOG_Trace, | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_ReadLine': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5433,6 +5696,46 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4146:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4146 | CORE_LOGF_ERRNO_EXX(18, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4208:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4208 | CORE_LOGF_ERRNO_EXX(19, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:137:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 137 | LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2140:9: note: in expansion of macro 'LOG_WRITE' + 2140 | LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11, + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -5451,8 +5754,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1056:5: note: in expansion of macro 'CONN_NOT_NULL' 1056 | CONN_NOT_NULL(25, ReadLine); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Poll_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5462,27 +5763,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2359:9: note: in expansion of macro 'CORE_LOG_X' - 2359 | CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)"); - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2157:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2157 | CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' + 72 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1100:17: note: in expansion of macro 'CONN_LOG_EX' + 1100 | CONN_LOG_EX(35, ReadLine, eLOG_Critical, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5495,28 +5784,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2289:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 2289 | CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4246:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4246 | CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' - 72 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1100:17: note: in expansion of macro 'CONN_LOG_EX' - 1100 | CONN_LOG_EX(35, ReadLine, eLOG_Critical, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Status': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5551,21 +5821,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2850:13: note: in expansion of macro 'CORE_LOGF' - 2850 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ @@ -5581,37 +5836,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1120:5: note: in expansion of macro 'CONN_NOT_NULL' 1120 | CONN_NOT_NULL(26, Status); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2860:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 2860 | CORE_LOGF_ERRNO_EXX(6, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2396:9: note: in expansion of macro 'CORE_LOGF_X' - 2396 | CORE_LOGF_X(3, eLOG_Warning, - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Close': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Connect_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5645,21 +5871,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2898:25: note: in expansion of macro 'CORE_LOGF' - 2898 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ @@ -5675,21 +5886,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1166:5: note: in expansion of macro 'CONN_NOT_NULL' 1166 | CONN_NOT_NULL(27, Close); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2419:9: note: in expansion of macro 'CORE_LOGF_X' - 2419 | CORE_LOGF_X(4, eLOG_Error, - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_SetCallback': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5703,19 +5899,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' - 72 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:106:11: note: in expansion of macro 'CONN_LOG_EX' - 106 | CONN_LOG_EX(subcode, func_name, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:120:34: note: in expansion of macro 'CONN_NOT_NULL_EX' - 120 | #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1186:5: note: in expansion of macro 'CONN_NOT_NULL' - 1186 | CONN_NOT_NULL(28, SetCallback); - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Recv': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4350:13: note: in expansion of macro 'CORE_LOGF_X' + 4350 | CORE_LOGF_X(142, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5728,18 +5914,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' - 72 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:113:11: note: in expansion of macro 'CONN_LOG_EX' - 113 | CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:120:34: note: in expansion of macro 'CONN_NOT_NULL_EX' - 120 | #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1186:5: note: in expansion of macro 'CONN_NOT_NULL' - 1186 | CONN_NOT_NULL(28, SetCallback); - | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4375:13: note: in expansion of macro 'CORE_LOGF_X' + 4375 | CORE_LOGF_X(22, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5752,25 +5929,25 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3054:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3054 | CORE_LOGF_ERRNO_EXX(7, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Read_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4408:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4408 | CORE_LOGF_ERRNO_EXX(23, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3238:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 3238 | CORE_LOGF_ERRNO_X(8, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2359:9: note: in expansion of macro 'CORE_LOG_X' + 2359 | CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)"); + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5780,31 +5957,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2471:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2471 | CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' - 72 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1192:9: note: in expansion of macro 'CONN_LOG_EX' - 1192 | CONN_LOG_EX(29, SetCallback, eLOG_Error, errbuf, eIO_InvalidArg); - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_GetSOCK': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4470:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4470 | CORE_LOGF_ERRNO_EXX(151, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5826,24 +5984,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:120:34: note: in expansion of macro 'CONN_NOT_NULL_EX' 120 | #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1218:5: note: in expansion of macro 'CONN_NOT_NULL' - 1218 | CONN_NOT_NULL(36, GetSOCK); - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1186:5: note: in expansion of macro 'CONN_NOT_NULL' + 1186 | CONN_NOT_NULL(28, SetCallback); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2488:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2488 | CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno, - | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5865,8 +6008,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:120:34: note: in expansion of macro 'CONN_NOT_NULL_EX' 120 | #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1218:5: note: in expansion of macro 'CONN_NOT_NULL' - 1218 | CONN_NOT_NULL(36, GetSOCK); +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1186:5: note: in expansion of macro 'CONN_NOT_NULL' + 1186 | CONN_NOT_NULL(28, SetCallback); | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5880,12 +6023,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2535:9: note: in expansion of macro 'CORE_LOGF_X' - 2535 | CORE_LOGF_X(7, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2396:9: note: in expansion of macro 'CORE_LOGF_X' + 2396 | CORE_LOGF_X(3, eLOG_Warning, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Send': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5898,11 +6038,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3615:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3615 | CORE_LOGF_ERRNO_EXX(11, eLOG_Trace, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4481:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4481 | CORE_LOGF_ERRNO_EXX(135, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_WritePending': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5912,12 +6050,16 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' - 155 | DO_CORE_LOG(0, 0, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2569:9: note: in expansion of macro 'CORE_LOG' - 2569 | CORE_LOG(eLOG_Warning, "[URL_Connect] " - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' + 72 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1192:9: note: in expansion of macro 'CONN_LOG_EX' + 1192 | CONN_LOG_EX(29, SetCallback, eLOG_Error, errbuf, eIO_InvalidArg); + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_GetSOCK': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5927,69 +6069,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2573:9: note: in expansion of macro 'CORE_LOG_X' - 2573 | CORE_LOG_X(9, eLOG_Error, - | ^~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3780:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3780 | CORE_LOGF_ERRNO_EXX(12, sock->log != eOff - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Write_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2615:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2615 | CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3846:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 3846 | CORE_LOGF_ERRNO_X(154, eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.h:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c:33: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Shutdown': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2419:9: note: in expansion of macro 'CORE_LOGF_X' + 2419 | CORE_LOGF_X(4, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6002,36 +6087,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3962:21: note: in expansion of macro 'CORE_LOGF_X' - 3962 | CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec) - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.h:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:34: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ - -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c -o ncbi_service.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' + 72 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:106:11: note: in expansion of macro 'CONN_LOG_EX' + 106 | CONN_LOG_EX(subcode, func_name, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:120:34: note: in expansion of macro 'CONN_NOT_NULL_EX' + 120 | #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1218:5: note: in expansion of macro 'CONN_NOT_NULL' + 1218 | CONN_NOT_NULL(36, GetSOCK); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3998:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3998 | CORE_LOGF_ERRNO_EXX(127, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6044,15 +6114,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4049:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4049 | CORE_LOGF_ERRNO_EXX(16, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Close_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4526:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4526 | CORE_LOGF_ERRNO_EXX(131, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.h:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:34: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6065,8 +6138,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4130:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4130 | CORE_LOGF_ERRNO_EXX(17, eLOG_Trace, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4574:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4574 | CORE_LOGF_ERRNO_EXX(25, sock->log != eOff | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6077,62 +6150,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4146:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4146 | CORE_LOGF_ERRNO_EXX(18, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4208:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4208 | CORE_LOGF_ERRNO_EXX(19, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4246:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4246 | CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Connect_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4350:13: note: in expansion of macro 'CORE_LOGF_X' - 4350 | CORE_LOGF_X(142, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2471:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2471 | CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6145,71 +6168,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4375:13: note: in expansion of macro 'CORE_LOGF_X' - 4375 | CORE_LOGF_X(22, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4408:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4408 | CORE_LOGF_ERRNO_EXX(23, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4470:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4470 | CORE_LOGF_ERRNO_EXX(151, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4481:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4481 | CORE_LOGF_ERRNO_EXX(135, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' + 72 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:113:11: note: in expansion of macro 'CONN_LOG_EX' + 113 | CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:120:34: note: in expansion of macro 'CONN_NOT_NULL_EX' + 120 | #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1218:5: note: in expansion of macro 'CONN_NOT_NULL' + 1218 | CONN_NOT_NULL(36, GetSOCK); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4526:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4526 | CORE_LOGF_ERRNO_EXX(131, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6219,12 +6189,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4574:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4574 | CORE_LOGF_ERRNO_EXX(25, sock->log != eOff - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2488:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2488 | CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6240,10 +6210,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4616:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 4616 | CORE_LOGF_ERRNO_EXX(26, sock->log != eOff | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Create': -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:44: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'x_ServiceName': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6256,9 +6222,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:122:9: note: in expansion of macro 'CORE_LOGF_X' - 122 | CORE_LOGF_X(7, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2535:9: note: in expansion of macro 'CORE_LOGF_X' + 2535 | CORE_LOGF_X(7, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Create': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6290,21 +6259,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4787:9: note: in expansion of macro 'CORE_LOGF_X' 4787 | CORE_LOGF_X(47, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:161:17: note: in expansion of macro 'CORE_LOGF_X' - 161 | CORE_LOGF_X(8, eLOG_Error, - | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6320,7 +6285,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4845:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 4845 | CORE_LOGF_ERRNO_EXX(148, eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'x_Open': +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6330,13 +6295,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' + 155 | DO_CORE_LOG(0, 0, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:447:13: note: in expansion of macro 'CORE_LOGF_X' - 447 | CORE_LOGF_X(1, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2569:9: note: in expansion of macro 'CORE_LOG' + 2569 | CORE_LOG(eLOG_Warning, "[URL_Connect] " + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6358,6 +6322,36 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2573:9: note: in expansion of macro 'CORE_LOG_X' + 2573 | CORE_LOG_X(9, eLOG_Error, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2615:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2615 | CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ @@ -6367,8 +6361,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4938:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 4938 | CORE_LOGF_ERRNO_EXX(50, eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6384,6 +6376,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4955:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 4955 | CORE_LOGF_ERRNO_X(49, eLOG_Critical, errno, | ^~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6429,6 +6423,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5094:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 5094 | CORE_LOGF_ERRNO_EXX(153, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6459,11 +6456,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5128:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 5128 | CORE_LOGF_ERRNO_EXX(124, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6479,275 +6471,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5146:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 5146 | CORE_LOGF_ERRNO_EXX(43, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateListening': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'SERV_SetImplicitServerType': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5220:13: note: in expansion of macro 'CORE_LOGF_X' - 5220 | CORE_LOGF_X(144, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:1241:9: warning: pointer 'svc' may be used after 'realloc' [-Wuse-after-free] - 1241 | free(svc); - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:1239:25: note: call to 'realloc' here - 1239 | if (!(buf = (char*) realloc(svc, len + sizeof(CONN_IMPLICIT_SERVER_TYPE) - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1240 | + 2/*"=\0"*/) + strlen(typ))) { - | ~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5262:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5262 | CORE_LOGF_ERRNO_EXX(34, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5307:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5307 | CORE_LOGF_ERRNO_EXX(35, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5362:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5362 | CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE - | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5389:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5389 | CORE_LOGF_ERRNO_EXX(150, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5459:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5459 | CORE_LOGF_ERRNO_EXX(37, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5521:9: note: in expansion of macro 'CORE_LOGF_X' - 5521 | CORE_LOGF_X(115, eLOG_Note, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Accept': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5558:9: note: in expansion of macro 'CORE_LOGF_X' - 5558 | CORE_LOGF_X(39, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5613:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5613 | CORE_LOGF_ERRNO_EXX(40, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5738:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5738 | CORE_LOGF_ERRNO_EXX(42, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5748:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5748 | CORE_LOGF_ERRNO_EXX(152, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5759:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5759 | CORE_LOGF_ERRNO_EXX(137, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CloseListening': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5822:9: note: in expansion of macro 'CORE_LOGF_X' - 5822 | CORE_LOGF_X(44, eLOG_Note, - | ^~~~~~~~~~~ -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5848:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5848 | CORE_LOGF_ERRNO_EXX(45, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5942:17: note: in expansion of macro 'CORE_LOGF_X' - 5942 | CORE_LOGF_X(20, eLOG_Critical, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5995:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5995 | CORE_LOGF_ERRNO_EXX(94, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:34: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c: In function 's_SendRcpt': @@ -6769,6 +6492,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:415:13: note: in expansion of macro 'SENDMAIL_RETURN' 415 | SENDMAIL_RETURN(3, "Recipient address is too long"); | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateListening': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6820,7 +6544,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:430:13: note: in expansion of macro 'SENDMAIL_RETURN2' 430 | SENDMAIL_RETURN2(5, proto_error, buf); | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_SendMsg': +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:44: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'x_ServiceName': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6833,9 +6559,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6042:9: note: in expansion of macro 'CORE_LOGF_X' - 6042 | CORE_LOGF_X(88, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:122:9: note: in expansion of macro 'CORE_LOGF_X' + 122 | CORE_LOGF_X(7, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c: In function 'CORE_SendMailEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6848,12 +6575,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6051:9: note: in expansion of macro 'CORE_LOGF_X' - 6051 | CORE_LOGF_X(89, eLOG_Error, - | ^~~~~~~~~~~ -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c: In function 'CORE_SendMailEx': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:161:17: note: in expansion of macro 'CORE_LOGF_X' + 161 | CORE_LOGF_X(8, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6884,9 +6608,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6108:17: note: in expansion of macro 'CORE_LOGF_X' - 6108 | CORE_LOGF_X(90, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5220:13: note: in expansion of macro 'CORE_LOGF_X' + 5220 | CORE_LOGF_X(144, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6965,22 +6694,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6159:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 6159 | CORE_LOGF_ERRNO_EXX(91, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6999,21 +6712,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6213:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6213 | CORE_LOGF_ERRNO_X(28, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -7032,18 +6730,20 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' - 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:526:9: note: in expansion of macro 'SENDMAIL_RETURN' - 526 | SENDMAIL_RETURN(13, "Write error in MAIL command"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5262:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5262 | CORE_LOGF_ERRNO_EXX(34, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'x_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7056,12 +6756,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' - 364 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:529:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 529 | SENDMAIL_RETURN2(14, "Protocol error in MAIL command", buffer); - | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:447:13: note: in expansion of macro 'CORE_LOGF_X' + 447 | CORE_LOGF_X(1, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7077,24 +6774,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:550:9: note: in expansion of macro 'SENDMAIL_RETURN' - 550 | SENDMAIL_RETURN(15, "Write error in DATA command"); +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:526:9: note: in expansion of macro 'SENDMAIL_RETURN' + 526 | SENDMAIL_RETURN(13, "Write error in MAIL command"); | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6241:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6241 | CORE_LOGF_ERRNO_X(143, eLOG_Warning, err, - | ^~~~~~~~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7110,8 +6793,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' 364 | CORE_LOGF_X(subcode, eLOG_Error, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:552:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 552 | SENDMAIL_RETURN2(16, "Protocol error in DATA command", buffer); +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:529:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 529 | SENDMAIL_RETURN2(14, "Protocol error in MAIL command", buffer); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7122,12 +6805,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6284:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6284 | CORE_LOGF_ERRNO_X(30, eLOG_Warning, err, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5307:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5307 | CORE_LOGF_ERRNO_EXX(35, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7140,10 +6823,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6303:13: note: in expansion of macro 'CORE_LOGF_X' - 6303 | CORE_LOGF_X(116, eLOG_Note, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' + 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:550:9: note: in expansion of macro 'SENDMAIL_RETURN' + 550 | SENDMAIL_RETURN(15, "Write error in DATA command"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7156,11 +6841,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6359:9: note: in expansion of macro 'CORE_LOGF_X' - 6359 | CORE_LOGF_X(117, eLOG_Note, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' + 364 | CORE_LOGF_X(subcode, eLOG_Error, \ | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:552:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 552 | SENDMAIL_RETURN2(16, "Protocol error in DATA command", buffer); + | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7203,6 +6889,36 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5362:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5362 | CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5389:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5389 | CORE_LOGF_ERRNO_EXX(150, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -7221,6 +6937,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5459:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5459 | CORE_LOGF_ERRNO_EXX(37, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -7284,7 +7015,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:627:9: note: in expansion of macro 'SENDMAIL_RETURN' 627 | SENDMAIL_RETURN(20, "Write error in sending mailer information"); | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7297,10 +7027,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6584:9: note: in expansion of macro 'CORE_LOGF_X' - 6584 | CORE_LOGF_X(46, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' + 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:655:17: note: in expansion of macro 'SENDMAIL_RETURN' + 655 | SENDMAIL_RETURN(21, "Write error while sending custom header"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7313,12 +7045,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' - 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5521:9: note: in expansion of macro 'CORE_LOGF_X' + 5521 | CORE_LOGF_X(115, eLOG_Note, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:655:17: note: in expansion of macro 'SENDMAIL_RETURN' - 655 | SENDMAIL_RETURN(21, "Write error while sending custom header"); - | ^~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Accept': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7331,12 +7063,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' - 364 | CORE_LOGF_X(subcode, eLOG_Error, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5558:9: note: in expansion of macro 'CORE_LOGF_X' + 5558 | CORE_LOGF_X(39, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:664:13: note: in expansion of macro 'SENDMAIL_RETURN2' - 664 | SENDMAIL_RETURN2(22, error, buffer); - | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7349,9 +7078,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6752:9: note: in expansion of macro 'CORE_LOGF_X' - 6752 | CORE_LOGF_X(52, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' + 364 | CORE_LOGF_X(subcode, eLOG_Error, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:664:13: note: in expansion of macro 'SENDMAIL_RETURN2' + 664 | SENDMAIL_RETURN2(22, error, buffer); + | ^~~~~~~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7430,31 +7163,30 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6762:9: note: in expansion of macro 'CORE_LOGF_X' - 6762 | CORE_LOGF_X(53, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5613:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5613 | CORE_LOGF_ERRNO_EXX(40, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6773:9: note: in expansion of macro 'CORE_LOGF_X' - 6773 | CORE_LOGF_X(51, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5738:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5738 | CORE_LOGF_ERRNO_EXX(42, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7467,12 +7199,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6810:9: note: in expansion of macro 'CORE_LOGF_X' - 6810 | CORE_LOGF_X(54, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' + 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:715:13: note: in expansion of macro 'SENDMAIL_RETURN' + 715 | SENDMAIL_RETURN(27, "Write error while finalizing message body"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7485,9 +7217,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6817:9: note: in expansion of macro 'CORE_LOGF_X' - 6817 | CORE_LOGF_X(55, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' + 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:718:9: note: in expansion of macro 'SENDMAIL_RETURN' + 718 | SENDMAIL_RETURN(28, "Write error while finalizing message"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7500,12 +7235,27 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' - 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' + 364 | CORE_LOGF_X(subcode, eLOG_Error, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:715:13: note: in expansion of macro 'SENDMAIL_RETURN' - 715 | SENDMAIL_RETURN(27, "Write error while finalizing message body"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:723:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 723 | SENDMAIL_RETURN2(29, "Protocol error in sending message", buffer); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5748:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5748 | CORE_LOGF_ERRNO_EXX(152, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7521,8 +7271,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:718:9: note: in expansion of macro 'SENDMAIL_RETURN' - 718 | SENDMAIL_RETURN(28, "Write error while finalizing message"); +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:726:9: note: in expansion of macro 'SENDMAIL_RETURN' + 726 | SENDMAIL_RETURN(30, "Write error in QUIT command"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7539,9 +7289,27 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' 364 | CORE_LOGF_X(subcode, eLOG_Error, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:723:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 723 | SENDMAIL_RETURN2(29, "Protocol error in sending message", buffer); +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:728:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 728 | SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer); | ^~~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5759:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5759 | CORE_LOGF_ERRNO_EXX(137, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CloseListening': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7554,12 +7322,37 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' - 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5822:9: note: in expansion of macro 'CORE_LOGF_X' + 5822 | CORE_LOGF_X(44, eLOG_Note, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:726:9: note: in expansion of macro 'SENDMAIL_RETURN' - 726 | SENDMAIL_RETURN(30, "Write error in QUIT command"); - | ^~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5848:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5848 | CORE_LOGF_ERRNO_EXX(45, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'SERV_SetImplicitServerType': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:1241:9: warning: pointer 'svc' may be used after 'realloc' [-Wuse-after-free] + 1241 | free(svc); + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:1239:25: note: call to 'realloc' here + 1239 | if (!(buf = (char*) realloc(svc, len + sizeof(CONN_IMPLICIT_SERVER_TYPE) + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1240 | + 2/*"=\0"*/) + strlen(typ))) { + | ~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7572,9 +7365,27 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6825:9: note: in expansion of macro 'CORE_LOGF_X' - 6825 | CORE_LOGF_X(15, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5942:17: note: in expansion of macro 'CORE_LOGF_X' + 5942 | CORE_LOGF_X(20, eLOG_Critical, + | ^~~~~~~~~~~ +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5995:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5995 | CORE_LOGF_ERRNO_EXX(94, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_SendMsg': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7587,15 +7398,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' - 364 | CORE_LOGF_X(subcode, eLOG_Error, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6042:9: note: in expansion of macro 'CORE_LOGF_X' + 6042 | CORE_LOGF_X(88, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:728:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 728 | SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer); - | ^~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:115: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Create': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7608,10 +7416,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:273:9: note: in expansion of macro 'CORE_LOGF_X' - 273 | CORE_LOGF_X(1, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6051:9: note: in expansion of macro 'CORE_LOGF_X' + 6051 | CORE_LOGF_X(89, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7624,9 +7431,71 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6971:9: note: in expansion of macro 'CORE_LOGF_X' - 6971 | CORE_LOGF_X(56, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6108:17: note: in expansion of macro 'CORE_LOGF_X' + 6108 | CORE_LOGF_X(90, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6159:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 6159 | CORE_LOGF_ERRNO_EXX(91, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -w -j12 --jobserver-auth=7,8 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6213:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6213 | CORE_LOGF_ERRNO_X(28, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6241:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6241 | CORE_LOGF_ERRNO_X(143, eLOG_Warning, err, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6284:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6284 | CORE_LOGF_ERRNO_X(30, eLOG_Warning, err, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7639,10 +7508,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:295:13: note: in expansion of macro 'CORE_LOGF_X' - 295 | CORE_LOGF_X(2, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6303:13: note: in expansion of macro 'CORE_LOGF_X' + 6303 | CORE_LOGF_X(116, eLOG_Note, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_AttachFast': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7655,9 +7524,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:319:9: note: in expansion of macro 'CORE_LOGF_X' - 319 | CORE_LOGF_X(3, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6359:9: note: in expansion of macro 'CORE_LOGF_X' + 6359 | CORE_LOGF_X(117, eLOG_Note, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7670,10 +7540,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:329:9: note: in expansion of macro 'CORE_LOGF_X' - 329 | CORE_LOGF_X(4, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6584:9: note: in expansion of macro 'CORE_LOGF_X' + 6584 | CORE_LOGF_X(46, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Attach': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7686,9 +7556,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:360:17: note: in expansion of macro 'CORE_LOGF_X' - 360 | CORE_LOGF_X(34, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6752:9: note: in expansion of macro 'CORE_LOGF_X' + 6752 | CORE_LOGF_X(52, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7701,10 +7571,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6999:13: note: in expansion of macro 'CORE_LOGF_X' - 6999 | CORE_LOGF_X(57, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Find': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6762:9: note: in expansion of macro 'CORE_LOGF_X' + 6762 | CORE_LOGF_X(53, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7717,10 +7586,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:451:9: note: in expansion of macro 'CORE_LOGF_X' - 451 | CORE_LOGF_X(8, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6773:9: note: in expansion of macro 'CORE_LOGF_X' + 6773 | CORE_LOGF_X(51, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Take': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7733,14 +7602,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7013:13: note: in expansion of macro 'CORE_LOGF_X' - 7013 | CORE_LOGF_X(58, eLOG_Warning, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:636:12: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] - 636 | return &b->head; - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6810:9: note: in expansion of macro 'CORE_LOGF_X' + 6810 | CORE_LOGF_X(54, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7753,10 +7617,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7027:17: note: in expansion of macro 'CORE_LOGF_X' - 7027 | CORE_LOGF_X(59, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Alloc': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6817:9: note: in expansion of macro 'CORE_LOGF_X' + 6817 | CORE_LOGF_X(55, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7766,12 +7629,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:649:9: note: in expansion of macro 'CORE_LOG_X' - 649 | CORE_LOG_X(6, eLOG_Warning, "Heap Alloc: NULL heap"); - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6825:9: note: in expansion of macro 'CORE_LOGF_X' + 6825 | CORE_LOGF_X(15, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7784,8 +7648,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:655:9: note: in expansion of macro 'CORE_LOGF_X' - 655 | CORE_LOGF_X(7, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6971:9: note: in expansion of macro 'CORE_LOGF_X' + 6971 | CORE_LOGF_X(56, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7799,10 +7663,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:702:13: note: in expansion of macro 'CORE_LOGF_X' - 702 | CORE_LOGF_X(9, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6999:13: note: in expansion of macro 'CORE_LOGF_X' + 6999 | CORE_LOGF_X(57, eLOG_Warning, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Free': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7812,12 +7675,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:826:9: note: in expansion of macro 'CORE_LOG_X' - 826 | CORE_LOG_X(10, eLOG_Warning, "Heap Free: NULL heap"); - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7013:13: note: in expansion of macro 'CORE_LOGF_X' + 7013 | CORE_LOGF_X(58, eLOG_Warning, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7830,9 +7696,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:832:9: note: in expansion of macro 'CORE_LOGF_X' - 832 | CORE_LOGF_X(11, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7027:17: note: in expansion of macro 'CORE_LOGF_X' + 7027 | CORE_LOGF_X(59, eLOG_Warning, + | ^~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7860,10 +7727,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:845:13: note: in expansion of macro 'CORE_LOGF_X' - 845 | CORE_LOGF_X(13, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7046:13: note: in expansion of macro 'CORE_LOGF_X' + 7046 | CORE_LOGF_X(61, eLOG_Warning, | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7877,9 +7745,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7046:13: note: in expansion of macro 'CORE_LOGF_X' - 7046 | CORE_LOGF_X(61, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7056:9: note: in expansion of macro 'CORE_LOGF_X' + 7056 | CORE_LOGF_X(62, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7892,9 +7761,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7056:9: note: in expansion of macro 'CORE_LOGF_X' - 7056 | CORE_LOGF_X(62, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7225:9: note: in expansion of macro 'CORE_LOGF_X' + 7225 | CORE_LOGF_X(63, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7907,9 +7777,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:853:17: note: in expansion of macro 'CORE_LOGF_X' - 853 | CORE_LOGF_X(12, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7266:9: note: in expansion of macro 'CORE_LOGF_X' + 7266 | CORE_LOGF_X(64, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7922,10 +7793,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:865:5: note: in expansion of macro 'CORE_LOGF_X' - 865 | CORE_LOGF_X(14, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_FreeFast': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7308:13: note: in expansion of macro 'CORE_LOGF_X' + 7308 | CORE_LOGF_X(65, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7935,12 +7805,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:877:9: note: in expansion of macro 'CORE_LOG_X' - 877 | CORE_LOG_X(15, eLOG_Warning, "Heap Free: NULL heap"); - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7318:9: note: in expansion of macro 'CORE_LOGF_X' + 7318 | CORE_LOGF_X(66, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7953,8 +7824,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:883:9: note: in expansion of macro 'CORE_LOGF_X' - 883 | CORE_LOGF_X(16, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7352:9: note: in expansion of macro 'CORE_LOGF_X' + 7352 | CORE_LOGF_X(125, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7968,9 +7839,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:902:13: note: in expansion of macro 'CORE_LOGF_X' - 902 | CORE_LOGF_X(17, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7405:21: note: in expansion of macro 'CORE_LOGF_X' + 7405 | CORE_LOGF_X(165, eLOG_Critical, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7983,10 +7854,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:913:13: note: in expansion of macro 'CORE_LOGF_X' - 913 | CORE_LOGF_X(18, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7422:21: note: in expansion of macro 'CORE_LOGF_X' + 7422 | CORE_LOGF_X(166, eLOG_Critical, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Pushback': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7999,10 +7870,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7225:9: note: in expansion of macro 'CORE_LOGF_X' - 7225 | CORE_LOGF_X(63, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7455:9: note: in expansion of macro 'CORE_LOGF_X' + 7455 | CORE_LOGF_X(67, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8015,10 +7886,27 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:920:13: note: in expansion of macro 'CORE_LOGF_X' - 920 | CORE_LOGF_X(19, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7512:17: note: in expansion of macro 'CORE_LOGF_X' + 7512 | CORE_LOGF_X(68, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7539:13: note: in expansion of macro 'CORE_LOGF_X' + 7539 | CORE_LOGF_X(69, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Trim': +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:115: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Create': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8031,8 +7919,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:942:9: note: in expansion of macro 'CORE_LOGF_X' - 942 | CORE_LOGF_X(30, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:273:9: note: in expansion of macro 'CORE_LOGF_X' + 273 | CORE_LOGF_X(1, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8046,9 +7934,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:977:13: note: in expansion of macro 'CORE_LOGF_X' - 977 | CORE_LOGF_X(31, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:295:13: note: in expansion of macro 'CORE_LOGF_X' + 295 | CORE_LOGF_X(2, eLOG_Warning, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_AttachFast': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8061,10 +7950,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1004:9: note: in expansion of macro 'CORE_LOGF_X' - 1004 | CORE_LOGF_X(32, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:319:9: note: in expansion of macro 'CORE_LOGF_X' + 319 | CORE_LOGF_X(3, eLOG_Warning, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'x_HEAP_Walk': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8077,9 +7965,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1025:13: note: in expansion of macro 'CORE_LOGF_X' - 1025 | CORE_LOGF_X(28, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:329:9: note: in expansion of macro 'CORE_LOGF_X' + 329 | CORE_LOGF_X(4, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8092,10 +7980,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7266:9: note: in expansion of macro 'CORE_LOGF_X' - 7266 | CORE_LOGF_X(64, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7549:9: note: in expansion of macro 'CORE_LOGF_X' + 7549 | CORE_LOGF_X(70, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8108,9 +7996,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7308:13: note: in expansion of macro 'CORE_LOGF_X' - 7308 | CORE_LOGF_X(65, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7568:9: note: in expansion of macro 'CORE_LOGF_X' + 7568 | CORE_LOGF_X(71, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8123,10 +8011,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7318:9: note: in expansion of macro 'CORE_LOGF_X' - 7318 | CORE_LOGF_X(66, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7575:9: note: in expansion of macro 'CORE_LOGF_X' + 7575 | CORE_LOGF_X(72, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Attach': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8139,9 +8027,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1038:13: note: in expansion of macro 'CORE_LOGF_X' - 1038 | CORE_LOGF_X(26, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:360:17: note: in expansion of macro 'CORE_LOGF_X' + 360 | CORE_LOGF_X(34, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Find': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8154,9 +8043,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7352:9: note: in expansion of macro 'CORE_LOGF_X' - 7352 | CORE_LOGF_X(125, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:451:9: note: in expansion of macro 'CORE_LOGF_X' + 451 | CORE_LOGF_X(8, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Take': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:636:12: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] + 636 | return &b->head; + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Alloc': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8166,12 +8060,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1041:13: note: in expansion of macro 'CORE_LOGF_X' - 1041 | CORE_LOGF_X(27, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:649:9: note: in expansion of macro 'CORE_LOG_X' + 649 | CORE_LOG_X(6, eLOG_Warning, "Heap Alloc: NULL heap"); + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8184,8 +8078,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1056:9: note: in expansion of macro 'CORE_LOGF_X' - 1056 | CORE_LOGF_X(23, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:655:9: note: in expansion of macro 'CORE_LOGF_X' + 655 | CORE_LOGF_X(7, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8199,9 +8093,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7405:21: note: in expansion of macro 'CORE_LOGF_X' - 7405 | CORE_LOGF_X(165, eLOG_Critical, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:702:13: note: in expansion of macro 'CORE_LOGF_X' + 702 | CORE_LOGF_X(9, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8214,9 +8109,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7422:21: note: in expansion of macro 'CORE_LOGF_X' - 7422 | CORE_LOGF_X(166, eLOG_Critical, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7722:9: note: in expansion of macro 'CORE_LOGF_X' + 7722 | CORE_LOGF_X(73, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Free': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8226,12 +8123,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1143:13: note: in expansion of macro 'CORE_LOGF_X' - 1143 | CORE_LOGF_X(21, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:826:9: note: in expansion of macro 'CORE_LOG_X' + 826 | CORE_LOG_X(10, eLOG_Warning, "Heap Free: NULL heap"); + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8244,10 +8141,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1158:17: note: in expansion of macro 'CORE_LOGF_X' - 1158 | CORE_LOGF_X(20, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Pushback': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:832:9: note: in expansion of macro 'CORE_LOGF_X' + 832 | CORE_LOGF_X(11, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8260,8 +8156,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1176:13: note: in expansion of macro 'CORE_LOGF_X' - 1176 | CORE_LOGF_X(22, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:845:13: note: in expansion of macro 'CORE_LOGF_X' + 845 | CORE_LOGF_X(13, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8275,10 +8171,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1187:17: note: in expansion of macro 'CORE_LOGF_X' - 1187 | CORE_LOGF_X(24, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:853:17: note: in expansion of macro 'CORE_LOGF_X' + 853 | CORE_LOGF_X(12, eLOG_Warning, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Walk': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8291,10 +8186,25 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7455:9: note: in expansion of macro 'CORE_LOGF_X' - 7455 | CORE_LOGF_X(67, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:865:5: note: in expansion of macro 'CORE_LOGF_X' + 865 | CORE_LOGF_X(14, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_FreeFast': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:877:9: note: in expansion of macro 'CORE_LOG_X' + 877 | CORE_LOG_X(15, eLOG_Warning, "Heap Free: NULL heap"); + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8307,9 +8217,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7512:17: note: in expansion of macro 'CORE_LOGF_X' - 7512 | CORE_LOGF_X(68, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7784:9: note: in expansion of macro 'CORE_LOGF_X' + 7784 | CORE_LOGF_X(158, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8319,16 +8229,29 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1224:9: note: in expansion of macro 'CORE_LOG_X' - 1224 | CORE_LOG_X(29, eLOG_Warning, "Heap Walk: NULL heap"); - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1229:12: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] - 1229 | return &s_HEAP_Walk(heap, ptr)->head; - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Next': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7791:9: note: in expansion of macro 'CORE_LOGF_X' + 7791 | CORE_LOGF_X(159, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7804:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7804 | CORE_LOGF_ERRNO_EXX(160, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay': +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8338,18 +8261,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1237:9: note: in expansion of macro 'CORE_LOG_X' - 1237 | CORE_LOG_X(34, eLOG_Warning, "Heap Next: NULL heap"); - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1242:65: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] - 1242 | for (n = s_HEAP_Walk(heap, ptr); n; n = s_HEAP_Walk(heap, &n->head)) { - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1246:12: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] - 1246 | return &n->head; - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:883:9: note: in expansion of macro 'CORE_LOGF_X' + 883 | CORE_LOGF_X(16, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8362,10 +8279,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7539:13: note: in expansion of macro 'CORE_LOGF_X' - 7539 | CORE_LOGF_X(69, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:902:13: note: in expansion of macro 'CORE_LOGF_X' + 902 | CORE_LOGF_X(17, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Destroy': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8378,10 +8294,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7549:9: note: in expansion of macro 'CORE_LOGF_X' - 7549 | CORE_LOGF_X(70, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:913:13: note: in expansion of macro 'CORE_LOGF_X' + 913 | CORE_LOGF_X(18, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8394,10 +8309,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1325:9: note: in expansion of macro 'CORE_LOGF_X' - 1325 | CORE_LOGF_X(33, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7826:9: note: in expansion of macro 'CORE_LOGF_X' + 7826 | CORE_LOGF_X(156, eLOG_Warning, | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8410,9 +8324,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7568:9: note: in expansion of macro 'CORE_LOGF_X' - 7568 | CORE_LOGF_X(71, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:920:13: note: in expansion of macro 'CORE_LOGF_X' + 920 | CORE_LOGF_X(19, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Trim': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8425,12 +8340,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7575:9: note: in expansion of macro 'CORE_LOGF_X' - 7575 | CORE_LOGF_X(72, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:942:9: note: in expansion of macro 'CORE_LOGF_X' + 942 | CORE_LOGF_X(30, eLOG_Error, | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j12 --jobserver-auth=7,8 all -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx': -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8443,16 +8355,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7722:9: note: in expansion of macro 'CORE_LOGF_X' - 7722 | CORE_LOGF_X(73, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:977:13: note: in expansion of macro 'CORE_LOGF_X' + 977 | CORE_LOGF_X(31, eLOG_Warning, + | ^~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c:32: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8465,12 +8379,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7784:9: note: in expansion of macro 'CORE_LOGF_X' - 7784 | CORE_LOGF_X(158, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7833:9: note: in expansion of macro 'CORE_LOGF_X' + 7833 | CORE_LOGF_X(157, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7846:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7846 | CORE_LOGF_ERRNO_EXX(75, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j12 --jobserver-auth=7,8 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8483,8 +8411,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7791:9: note: in expansion of macro 'CORE_LOGF_X' - 7791 | CORE_LOGF_X(159, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1004:9: note: in expansion of macro 'CORE_LOGF_X' + 1004 | CORE_LOGF_X(32, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8498,10 +8426,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7804:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7804 | CORE_LOGF_ERRNO_EXX(160, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7897:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7897 | CORE_LOGF_ERRNO_EXX(76, eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'x_HEAP_Walk': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8514,9 +8442,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7826:9: note: in expansion of macro 'CORE_LOGF_X' - 7826 | CORE_LOGF_X(156, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1025:13: note: in expansion of macro 'CORE_LOGF_X' + 1025 | CORE_LOGF_X(28, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8529,42 +8457,40 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7833:9: note: in expansion of macro 'CORE_LOGF_X' - 7833 | CORE_LOGF_X(157, eLOG_Error, - | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1038:13: note: in expansion of macro 'CORE_LOGF_X' + 1038 | CORE_LOGF_X(26, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7846:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7846 | CORE_LOGF_ERRNO_EXX(75, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1041:13: note: in expansion of macro 'CORE_LOGF_X' + 1041 | CORE_LOGF_X(27, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7897:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7897 | CORE_LOGF_ERRNO_EXX(76, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1056:9: note: in expansion of macro 'CORE_LOGF_X' + 1056 | CORE_LOGF_X(23, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8595,7 +8521,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8024:9: note: in expansion of macro 'CORE_LOGF_X' 8024 | CORE_LOGF_X(78, eLOG_Error, | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8611,6 +8536,59 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8042:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 8042 | CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o +/bin/rm -f libtables.so .libtables.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libtables.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC raw_scoremat.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtables.so +/bin/ln -f .tables.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.tables.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1143:13: note: in expansion of macro 'CORE_LOGF_X' + 1143 | CORE_LOGF_X(21, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1158:17: note: in expansion of macro 'CORE_LOGF_X' + 1158 | CORE_LOGF_X(20, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1176:13: note: in expansion of macro 'CORE_LOGF_X' + 1176 | CORE_LOGF_X(22, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8626,8 +8604,39 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8058:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 8058 | CORE_LOGF_ERRNO_EXX(114, eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1187:17: note: in expansion of macro 'CORE_LOGF_X' + 1187 | CORE_LOGF_X(24, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Walk': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Connect': -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1224:9: note: in expansion of macro 'CORE_LOG_X' + 1224 | CORE_LOG_X(29, eLOG_Warning, "Heap Walk: NULL heap"); + | ^~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8658,6 +8667,29 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8095:9: note: in expansion of macro 'CORE_LOGF_X' 8095 | CORE_LOGF_X(81, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1229:12: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] + 1229 | return &s_HEAP_Walk(heap, ptr)->head; + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Next': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1237:9: note: in expansion of macro 'CORE_LOG_X' + 1237 | CORE_LOG_X(34, eLOG_Warning, "Heap Next: NULL heap"); + | ^~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1242:65: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] + 1242 | for (n = s_HEAP_Walk(heap, ptr); n; n = s_HEAP_Walk(heap, &n->head)) { + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8673,6 +8705,25 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8114:9: note: in expansion of macro 'CORE_LOGF_X' 8114 | CORE_LOGF_X(83, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1246:12: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] + 1246 | return &n->head; + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Destroy': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1325:9: note: in expansion of macro 'CORE_LOGF_X' + 1325 | CORE_LOGF_X(33, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8688,8 +8739,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8127:9: note: in expansion of macro 'CORE_LOGF_X' 8127 | CORE_LOGF_X(84, eLOG_Error, | ^~~~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -cd html/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8706,7 +8755,6 @@ 8156 | CORE_LOGF_ERRNO_EXX(85, eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg': -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8722,6 +8770,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8184:9: note: in expansion of macro 'CORE_LOGF_X' 8184 | CORE_LOGF_X(96, eLOG_Error, | ^~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +cd html/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8737,16 +8787,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8191:9: note: in expansion of macro 'CORE_LOGF_X' 8191 | CORE_LOGF_X(95, eLOG_Error, | ^~~~~~~~~~~ -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o -/bin/rm -f libtables.so .libtables.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libtables.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC raw_scoremat.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtables.so -/bin/ln -f .tables.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.tables.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_RecvMsg': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8810,6 +8850,11 @@ 8295 | CORE_LOGF_X(86, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WipeMsg': +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +cd corelib/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8840,8 +8885,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8334:9: note: in expansion of macro 'CORE_LOGF_X' 8334 | CORE_LOGF_X(97, eLOG_Error, | ^~~~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -cd corelib/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8858,8 +8902,6 @@ 8354 | CORE_LOGF_X(99, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8875,6 +8917,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8372:9: note: in expansion of macro 'CORE_LOGF_X' 8372 | CORE_LOGF_X(101, eLOG_Error, | ^~~~~~~~~~~ +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8905,11 +8949,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8399:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 8399 | CORE_LOGF_ERRNO_EXX(102, eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8926,14 +8965,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8570:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 8570 | CORE_LOGF_ERRNO_EXX(74, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetupSSLInternal': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8944,7 +8976,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion omake[5]: warning: -j12 forced in submake: resetting jobserver mode. +f macro 'DO_CORE_LOG' 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8985:17: note: in expansion of macro 'CORE_LOG_X' @@ -8953,18 +8986,15 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c:38: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c: In function 's_VT_Open': @@ -8983,14 +9013,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c:173:13: note: in expansion of macro 'CORE_LOGF_X' 173 | CORE_LOGF_X(33, eLOG_Error, | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -w -j12 --jobserver-auth=7,8 all /ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_base64.c -o ncbi_base64.o @@ -8999,14 +9023,32 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' cd util/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:39: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -9015,7 +9057,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:38: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Adjust': @@ -9049,14 +9091,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:609:17: note: in expansion of macro 'CORE_LOGF_X' 609 | CORE_LOGF_X(17, eLOG_Trace, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/node.cpp -o node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/html.cpp -o html.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/htmlhelper.cpp -o htmlhelper.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/page.cpp -o page.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/pager.cpp -o pager.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/selection.cpp -o selection.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -9148,10 +9183,6 @@ 998 | CORE_LOGF_ERRNO_X(20, eLOG_Error, error, | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ConnectAndSend': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9246,10 +9277,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1563:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 1563 | CORE_LOGF_ERRNO_X(7, eLOG_Error, error, | ^~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9280,6 +9307,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1670:9: note: in expansion of macro 'CORE_DATAF_X' 1670 | CORE_DATAF_X(9, fatal ? eLOG_Error : eLOG_Note, hdr, size, | ^~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9355,6 +9385,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1965:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 1965 | CORE_LOGF_ERRNO_X(11, eLOG_Error, error, | ^~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9430,9 +9463,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2045:13: note: in expansion of macro 'CORE_LOGF_X' 2045 | CORE_LOGF_X(15, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Read': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/node.cpp -o node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/html.cpp -o html.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/htmlhelper.cpp -o htmlhelper.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/page.cpp -o page.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/pager.cpp -o pager.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/selection.cpp -o selection.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Read': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9479,10 +9517,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2533:9: note: in expansion of macro 'CORE_LOGF_X' 2533 | CORE_LOGF_X(24, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +cd serial/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -w -j12 --jobserver-auth=7,8 flag-stamps In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -9491,22 +9533,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_version.c -o ncbi_version.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/cmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -cd serial/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null +make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_OpenDispatcher': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9535,16 +9566,6 @@ | | | | int * unsigned int * | %n -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:51: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9555,8 +9576,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of mamake[5]: warning: -j12 forced in submake: resetting jobserver mode. -cro 'DO_CORE_LOG' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:960:13: note: in expansion of macro 'CORE_LOGF_X' @@ -9577,7 +9597,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:984:13: note: in expansion of macro 'CORE_LOGF_X' 984 | CORE_LOGF_X(9, eLOG_Warning, | ^~~~~~~~~~~ -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9609,11 +9628,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:1213:9: note: in expansion of macro 'CORE_LOGF_X' 1213 | CORE_LOGF_X(10, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_version.c -o ncbi_version.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/cIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:51: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:50: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseData': @@ -9740,9 +9774,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:630:9: note: in expansion of macro 'CORE_LOGF_X' 630 | CORE_LOGF_X(3, eLOG_Trace, | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9759,7 +9795,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1041:9: note: in expansion of macro 'CORE_LOGF_X' 1041 | CORE_LOGF_X(2, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9770,27 +9805,19 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macmake[5]: warning: -j12 forced in submake: resetting jobserver mode. -ro 'DO_CORE_LOG' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1204:21: note: in expansion of macro 'CORE_LOGF_X' 1204 | CORE_LOGF_X(5, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPollCntl': -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9806,7 +9833,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1743:13: note: in expansion of macro 'CORE_LOGF_X' 1743 | CORE_LOGF_X(12, xxx->data ? eLOG_Error : eLOG_Warning, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o +/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libcomposition_adjustment.so +/bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.composition_adjustment.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILmake[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9817,15 +9858,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macmake[5]: warning: -j12 forced in submake: resetting jobserver mode. -ro 'DO_CORE_LOG' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2012:9: note: in expansion of macro 'CORE_LOGF_X' 2012 | CORE_LOGF_X(13, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Write': -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9841,17 +9880,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2088:17: note: in expansion of macro 'CORE_LOGF_X' 2088 | CORE_LOGF_X(6, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +D/build/algo/blast/composition_adjustment' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_CreateConnector': --map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o -/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libcomposition_adjustment.so -/bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.composition_adjustment.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUIL/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -9866,25 +9900,25 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2417:9: note: in expansion of macro 'CORE_LOG' 2417 | CORE_LOG(eLOG_Critical, "fFTP_UseProxy not yet implemented"); | ^~~~~~~~ -D/build/algo/blast/composition_adjustment' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' cd util/compress/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdata.cpp -o hookdata.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdatakey.cpp -o hookdatakey.o @@ -9892,46 +9926,116 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectinfo.cpp -o objectinfo.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectiter.cpp -o objectiter.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectio.cpp -o objectio.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.h:39, +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/compress.cpp -o compress.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream.cpp -o stream.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/streambuf.cpp -o streambuf.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream_util.cpp -o stream_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/bzip2.cpp -o bzip2.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/lzo.cppmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.h:39, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:33: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, | ^~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.h:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:38: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c: In function 's_Resolve': make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:209:9: note: in expansion of macro 'CORE_LOGF_X' + 209 | CORE_LOGF_X(5, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c: In function 'SERV_DISPD_Open': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:443:9: note: in expansion of macro 'CORE_LOGF' + 443 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/compress.cpp -o compress.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream.cpp -o stream.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/streambuf.cpp -o streambuf.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream_util.cpp -o stream_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/bzip2.cpp -o bzip2.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/lzo.cppmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:39: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c: In function 's_GetHeapCopy': @@ -10054,84 +10158,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:938:37: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] 938 | if ((info = SERV_CopyInfoEx(&svc->info, name)) != 0) { | ^~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.h:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -w -j12 --jobserver-auth=7,8 flag-stamps -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:38: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c: In function 's_Resolve': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:209:9: note: in expansion of macro 'CORE_LOGF_X' - 209 | CORE_LOGF_X(5, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c: In function 'SERV_DISPD_Open': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:443:9: note: in expansion of macro 'CORE_LOGF' - 443 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:39: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -w -j12 --jobserver-auth=7,8 flag-stamps -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:39: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c: In function 's_Resolve': @@ -10499,7 +10525,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:570:9: note: in expansion of macro 'CORE_LOGF_X' 570 | CORE_LOGF_X(eLSub_Alloc, eLOG_Critical, | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10515,8 +10540,27 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:581:9: note: in expansion of macro 'CORE_LOGF_X' 581 | CORE_LOGF_X(eLSub_Message, eLOG_Trace, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:39: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c: In function 'x_ParseExpires': @@ -10642,7 +10686,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:445:9: note: in expansion of macro 'CORE_LOGF_X' 445 | CORE_LOGF_X(eNSub_Json, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10793,9 +10836,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:602:17: note: in expansion of macro 'CORE_LOGF_X' 602 | CORE_LOGF_X(eNSub_BadData, eLOG_Warning, | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10916,8 +10956,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:711:17: note: in expansion of macro 'CORE_LOGF_X' 711 | CORE_LOGF_X(eNSub_Json, eLOG_Trace, | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11207,8 +11245,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1255:9: note: in expansion of macro 'CORE_LOGF_X' 1255 | CORE_LOGF_X(eNSub_TooLong, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11284,9 +11320,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1305:9: note: in expansion of macro 'CORE_LOGF_X' 1305 | CORE_LOGF_X(eNSub_TooLong, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11437,11 +11470,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1427:13: note: in expansion of macro 'CORE_LOGF_X' 1427 | CORE_LOGF_X(eNSub_BadData, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11518,6 +11546,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1506:9: note: in expansion of macro 'CORE_LOGF_X' 1506 | CORE_LOGF_X(eNSub_BadData, eLOG_Warning, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11563,56 +11593,34 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1551:9: note: in expansion of macro 'CORE_LOGF_X' 1551 | CORE_LOGF_X(eNSub_Message, eLOG_Trace, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' ++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c -o ncbi_local.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c -o ncbi_lbsmd.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c -o ncbi_linkerd.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c -o ncbi_namerd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Walmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Walmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.h:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -11621,13 +11629,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c: In function 'xx_LoadLocalIPs': @@ -11706,6 +11707,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:244:9: note: in expansion of macro 'CORE_LOGF' 244 | CORE_LOGF(eLOG_Trace, | ^~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c: In function 'x_LoadLocalIPs': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -11768,7 +11770,30 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:342:5: note: in expansion of macro 'CORE_LOG' 342 | CORE_LOG(eLOG_Warning, "Using default local IPv4 specs"); | ^~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.h:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c: In function 'x_DumpHdr': @@ -12063,6 +12088,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:520:13: note: in expansion of macro 'CORE_LOGF' 520 | CORE_LOGF(eLOG_Note, | ^~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12206,6 +12237,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:633:13: note: in expansion of macro 'CORE_LOG' 633 | CORE_LOG(eLOG_Warning, "DNS SRV RR blank target dirty"); | ^~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12343,6 +12375,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:737:9: note: in expansion of macro 'CORE_LOGF' 737 | CORE_LOGF(eLOG_Warning, | ^~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c: In function 'dns_cname': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -12465,8 +12504,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:870:25: note: in expansion of macro 'CORE_LOG' 870 | CORE_LOG(eLOG_Warning, | ^~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c: In function 'x_VerifyReply': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -12558,6 +12595,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:944:9: note: in expansion of macro 'CORE_LOG' 944 | CORE_LOG(eLOG_Error, "DNS reply has no records"); | ^~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12710,6 +12750,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:1226:13: note: in expansion of macro 'CORE_LOGF' 1226 | CORE_LOGF(eLOG_Error, | ^~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:1234:28: warning: format '%p' expects argument of type 'void *', but argument 3 has type 'const SSERV_Info *' [-Wformat=] 1234 | ("LBDNS adding dummy entry \"%s\" @%p %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -12747,7 +12790,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:1233:17: note: in expansion of macro 'CORE_LOGF' 1233 | CORE_LOGF(eLOG_Note, | ^~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c: In function 'SERV_LBDNS_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -12854,27 +12896,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:1619:5: note: in expansion of macro 'CORE_LOGF' 1619 | CORE_LOGF(data->debug ? eLOG_Note : eLOG_Trace, | ^~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -12890,64 +12914,57 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -w -j12 --jobserver-auth=7,8 flag-stamps l -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c -o parson.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c -o ncbi_localip.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c -o ncbi_lbdns.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-securimake[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-securi/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_init_string': make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_init_string': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 135 | strncpy(output_string, string, n); | ^ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:1119:18: note: length computed here 1119 | string_len = strlen(string); | ^~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_parse_string_with_comments': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] @@ -12958,16 +12975,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here 140 | return parson_strndup(string, strlen(string)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd cgi/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_deep_copy': -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 135 | strncpy(output_string, string, n); | ^ @@ -12976,8 +12984,46 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here 140 | return parson_strndup(string, strlen(string)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +cd cgi/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' @@ -12985,7 +13031,7 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -w -j12 --jobserver-auth=7,8 all /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/.#lock-map. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -13008,20 +13054,10 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13030,26 +13066,14 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging/message.cpp -o message.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging/listener.cpp -o listener.o -/bin/rm -f libxlogging.so .libxlogging.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxlogging.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC message.o listener.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxlogging.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxlogging.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxlogging.so -/bin/ln -f .xlogging.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xlogging.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +shared.cpp -o sequtil_shared.o +/bin/rm -f libsequtil.so .libsequtil.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsequtil.so +/bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sequtil.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' cd util/xregexp/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -13067,16 +13091,36 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' ty -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging/message.cpp -o message.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging/listener.cpp -o listener.o +/bin/rm -f libxlogging.so .libxlogging.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxlogging.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC message.o listener.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxlogging.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxlogging.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxlogging.so +/bin/ln -f .xlogging.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xlogging.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13085,22 +13129,24 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' openmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typeref.cpp -o typeref.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typemap.cpp -o typemap.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp -o stdtypes.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/enumerated.cpp -o enumerated.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/ptrinfo.cpp -o ptrinfo.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protectionmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -shared.cpp -o sequtil_shared.o -/bin/rm -f libsequtil.so .libsequtil.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsequtil.so -/bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sequtil.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13109,7 +13155,28 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13126,7 +13193,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/tar.cpp -o tar.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive.cpp -o archive.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_.cpp -o archive_.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/bu/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/bu/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13136,8 +13203,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13147,7 +13213,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13157,7 +13223,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13167,7 +13233,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13177,7 +13243,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13187,7 +13253,15 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile/rtprofile.cpp -o rtprofile.o +/bin/rm -f libutrtprof.so .libutrtprof.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libutrtprof.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC rtprofile.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libutrtprof.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libutrtprof.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libutrtprof.so +/bin/ln -f .utrtprof.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.utrtprof.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_pipe.cpp -o ncbi_pipe.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_pipe_connector.cpp -o ncbi_pipe_connector.o @@ -13195,13 +13269,8 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_userhost.cpp -o ncbi_userhost.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_monkey.cpp -o ncbi_monkey.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2producible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_run.cpp -o cgi_run.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_util.cpp -o cgi_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_session.cpp -o cgi_session.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-secumake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -13209,7 +13278,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13219,16 +13288,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile/rtprofile.cpp -o rtprofile.o -/bin/rm -f libutrtprof.so .libutrtprof.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libutrtprof.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC rtprofile.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libutrtprof.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libutrtprof.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libutrtprof.so -/bin/ln -f .utrtprof.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.utrtprof.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13238,13 +13298,50 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +producible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_run.cpp -o cgi_run.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_util.cpp -o cgi_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_session.cpp -o cgi_session.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-secu/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' + -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/continfo.cpp -o continfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stltypes.cpp -o stltypes.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/memberid.cpp -o memberid.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/memberlist.cpp -o memberlist.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/item.cpp -o item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfob.cpp -o classinfob.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REE/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -13253,16 +13350,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' - -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_cxx.cpp -o ncbi_service_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip_cxx.cpp -o ncbi_localip_cxx.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_blowfish.c -o ncbi_blowfish.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_usage_report.cpp -o ncbi_usage_report.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/connect_misc.cpp -o connect_misc.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -peIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c: In function 's_GnuTlsInit': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] @@ -13296,13 +13384,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c:911:5: note: in expansion of macro 'CORE_LOG_X' 911 | CORE_LOG_X(29, eLOG_Warning, "Unavailable feature GNUTLS"); | ^~~~~~~~~~ - -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/continfo.cpp -o continfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stltypes.cpp -o stltypes.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/memberid.cpp -o memberid.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/memberlist.cpp -o memberlist.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/item.cpp -o item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfob.cpp -o classinfob.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REEIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' + -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_cxx.cpp -o ncbi_service_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip_cxx.cpp -o ncbi_localip_cxx.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_blowfish.c -o ncbi_blowfish.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_usage_report.cpp -o ncbi_usage_report.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/connect_misc.cpp -o connect_misc.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pemake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, @@ -13310,7 +13406,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -13320,8 +13415,8 @@ 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c: In function 's_NoTlsInit': + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c: In function 'x_MbedTlsLogger': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13331,13 +13426,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:63:5: note: in expansion of macro 'CORE_LOG_X' - 63 | CORE_LOG_X(41, eLOG_Critical, "SSL has been explicitly disabled"); - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c: In function 'x_SetupNoTls': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:190:5: note: in expansion of macro 'CORE_LOGF_X' + 190 | CORE_LOGF_X(1, eLOG_Note, + | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c: In function 's_MbedTlsCreate': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13350,10 +13446,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:74:5: note: in expansion of macro 'CORE_LOG_X' - 74 | CORE_LOG_X(42, eLOG_Trace, "SSL has been explicitly disabled"); - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c: In function 'x_NcbiSetupTls': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:369:9: note: in expansion of macro 'CORE_LOG_X' + 369 | CORE_LOG_X(2, eLOG_Critical, + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13363,12 +13458,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:94:17: note: in expansion of macro 'CORE_LOG_X' - 94 | CORE_LOG_X(44, eLOG_Critical, - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:378:13: note: in expansion of macro 'CORE_LOGF_X' + 378 | CORE_LOGF_X(3, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c: In function 's_MbedTlsInit': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13381,10 +13477,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:104:13: note: in expansion of macro 'CORE_LOGF_X' - 104 | CORE_LOGF_X(43, eLOG_Critical, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c: In function 'NcbiCreateTlsCertCredentials': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:788:9: note: in expansion of macro 'CORE_LOGF_X' + 788 | CORE_LOGF_X(6, level, ("%s V%s (LogLevel=%d)", + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13394,12 +13489,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:128:9: note: in expansion of macro 'CORE_LOG_X' - 128 | CORE_LOG_X(45, eLOG_Error, - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:815:9: note: in expansion of macro 'CORE_LOGF_X' + 815 | CORE_LOGF_X(51, eLOG_Error, + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c: In function 's_NoTlsInit': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13412,9 +13510,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:139:13: note: in expansion of macro 'CORE_LOG_X' - 139 | CORE_LOG_X(48, eLOG_Warning, - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:63:5: note: in expansion of macro 'CORE_LOG_X' + 63 | CORE_LOG_X(41, eLOG_Critical, "SSL has been explicitly disabled"); + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c: In function 'x_SetupNoTls': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13424,13 +13523,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:169:9: note: in expansion of macro 'CORE_LOGF_X' - 169 | CORE_LOGF_X(46, eLOG_Critical, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c: In function 'NcbiDeleteTlsCertCredentials': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:74:5: note: in expansion of macro 'CORE_LOG_X' + 74 | CORE_LOG_X(42, eLOG_Trace, "SSL has been explicitly disabled"); + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c: In function 'x_NcbiSetupTls': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13440,16 +13539,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:212:5: note: in expansion of macro 'CORE_LOGF_X' - 212 | CORE_LOGF_X(47, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c: In function 'x_MbedTlsLogger': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:94:17: note: in expansion of macro 'CORE_LOG_X' + 94 | CORE_LOG_X(44, eLOG_Critical, + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13462,10 +13557,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:190:5: note: in expansion of macro 'CORE_LOGF_X' - 190 | CORE_LOGF_X(1, eLOG_Note, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c: In function 's_MbedTlsCreate': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:104:13: note: in expansion of macro 'CORE_LOGF_X' + 104 | CORE_LOGF_X(43, eLOG_Critical, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c: In function 'NcbiCreateTlsCertCredentials': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13478,8 +13573,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:369:9: note: in expansion of macro 'CORE_LOG_X' - 369 | CORE_LOG_X(2, eLOG_Critical, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:128:9: note: in expansion of macro 'CORE_LOG_X' + 128 | CORE_LOG_X(45, eLOG_Error, | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -13490,13 +13585,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:378:13: note: in expansion of macro 'CORE_LOGF_X' - 378 | CORE_LOGF_X(3, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c: In function 's_MbedTlsInit': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:139:13: note: in expansion of macro 'CORE_LOG_X' + 139 | CORE_LOG_X(48, eLOG_Warning, + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13509,9 +13603,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:788:9: note: in expansion of macro 'CORE_LOGF_X' - 788 | CORE_LOGF_X(6, level, ("%s V%s (LogLevel=%d)", +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:169:9: note: in expansion of macro 'CORE_LOGF_X' + 169 | CORE_LOGF_X(46, eLOG_Critical, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c: In function 'NcbiDeleteTlsCertCredentials': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13524,9 +13619,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:815:9: note: in expansion of macro 'CORE_LOGF_X' - 815 | CORE_LOGF_X(51, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:212:5: note: in expansion of macro 'CORE_LOGF_X' + 212 | CORE_LOGF_X(47, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c: In function 'NcbiDeleteMbedTlsCertCredentials': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -13589,15 +13684,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:1003:9: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' 1003 | CORE_LOG_ERRNO_EXX(12, eLOG_Error, err, errbuf, | ^~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13607,7 +13693,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13617,7 +13703,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13627,37 +13713,18 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o -/bin/rm -f libgene_info.so .libgene_info.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgene_info.so -/bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gene_info.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite/sqlitewrapp.cpp -o sqlitewrapp.o /bin/rm -f libsqlitewrapp.so .libsqlitewrapp.so.stamp @@ -13667,9 +13734,6 @@ /bin/ln -f .sqlitewrapp.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sqlitewrapp.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13678,8 +13742,6 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp: In static member function 'static void ncbi::CPrimitiveTypeFunctions::Skip(ncbi::CObjectIStream&, ncbi::TTypeInfo) [with T = long double]': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:147:23: warning: 'data' may be used uninitialized [-Wmaybe-uninitialized] 147 | in.SkipStd(data); @@ -13688,60 +13750,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:146:25: note: 'data' declared here 146 | TObjectType data; | ^~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -NTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/member.cpp -o member.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfo.cpp -o classinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/variant.cpp -o variant.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choice.cpp -o choice.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choiceptr.cpp -o choiceptr.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/aliasinfo.cpp -o aliasinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13753,19 +13761,7 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/components.cpp -o components.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/commentdiag.cpp -o commentdiag.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/indentstream.cpp -o indentstream.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/html_exception.cpp -o html_exception.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/writer_htmlenc.cpp -o writer_htmlenc.o -/bin/rm -f libxhtml.so .libxhtml.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxhtml.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC node.o html.o htmlhelper.o page.o pager.o selection.o components.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxhtml.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxhtml.so -/bin/ln -f .xhtml.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILDmake[5]: warning: -j12 forced in submake: resetting jobserver mode. -/status/.xhtml.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13795,7 +13791,27 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o +/bin/rm -f libgene_info.so .libgene_info.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgene_info.so +/bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gene_info.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13804,6 +13820,14 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j12 --jobserver-auth=7,8 all +NTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/member.cpp -o member.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfo.cpp -o classinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/variant.cpp -o variant.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choice.cpp -o choice.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choiceptr.cpp -o choiceptr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/aliasinfo.cpp -o aliasinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blastmake[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13835,7 +13859,19 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/components.cpp -o components.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/commentdiag.cpp -o commentdiag.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/indentstream.cpp -o indentstream.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/html_exception.cpp -o html_exception.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/writer_htmlenc.cpp -o writer_htmlenc.o +/bin/rm -f libxhtml.so .libxhtml.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxhtml.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC node.o html.o htmlhelper.o page.o pager.o selection.o components.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxhtml.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxhtml.so +/bin/ln -f .xhtml.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILDmake[5]: warning: -j12 forced in submake: resetting jobserver mode. +/status/.xhtml.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13855,7 +13891,13 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/serial.cpp -o serial.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/delaybuf.cpp -o delaybuf.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/pack_string.cpp -o pack_string.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-bdantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/exception.cpp -o exception.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objhook.cpp -o objhook.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objlist.cpp -o objlist.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objstack.cpp -o objstack.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasn.cpp -o objostrasn.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrasn.cpp -o objistrasn.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standardantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c -o ncbi_tls.o /bin/rm -f libxconnect.so .libxconnect.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libxconnect.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -Wl,--as-needed -fPIC ncbi_lbsm.o ncbi_lbsm_ipc.o ncbi_ansi_ext.o ncbi_types.o ncbi_core.o ncbi_priv.o ncbi_util.o ncbi_buffer.o ncbi_socket.o ncbi_connector.o ncbi_connection.o ncbi_connutil.o ncbi_ipv6.o ncbi_server_info.o ncbi_host_info.o ncbi_service.o ncbi_sendmail.o ncbi_base64.o ncbi_heapmgr.o ncbi_lb.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_service_connector.o ncbi_ftp_connector.o ncbi_version.o ncbi_iprange.o ncbi_local.o ncbi_lbsmd.o ncbi_dispd.o ncbi_linkerd.o ncbi_namerd.o parson.o ncbi_localip.o ncbi_lbdns.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_monkey.o ncbi_service_cxx.o ncbi_localip_cxx.o ncbi_blowfish.o ncbi_usage_report.o connect_misc.o ncbi_gnutls.o ncbi_mbedtls.o ncbi_tls.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread @@ -13865,14 +13907,14 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' cd algo/blast/core/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null -cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xthrserv UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xxconnect2 UNIX_PROJ="" sources= configurables=configurables.null -cd connect/ext/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnext UNIX_PROJ="" sources= configurables=configurables.null +cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xthrserv UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xxconnect2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd connect/ext/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnext UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -13881,19 +13923,13 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -last+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/exception.cpp -o exception.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objhook.cpp -o objhook.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objlist.cpp -o objlist.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objstack.cpp -o objstack.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasn.cpp -o objostrasn.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrasn.cpp -o objistrasn.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standarmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' @@ -13907,40 +13943,21 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -w -j12 --jobserver-auth=7,8 all /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnext to make__ext_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/.#lock-map. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c -o aa_ungapped.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_diagnostics.c -o blast_diagnostics.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c -o blast_engine.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_extend.c -o blast_extend.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_filter.c -o blast_filter.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werrmake[5]: warning: -j12 forced in submake: resetting jobserver mode. -or=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_lookup.c -o blas/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:484:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] - 484 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:491:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] - 491 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_OneHit': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:751:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] - 751 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:758:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] - 758 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_servicep.h:38, +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -WerrIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb.c:39: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, @@ -13948,17 +13965,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c: In function 'BLAST_PreliminarySearchEngine': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c:1365:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] - 1365 | (T_MB_IdbCheckOid)lookup_wrap->check_index_oid; - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c:1503:22: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] - 1503 | ((T_MB_IdxEndSearchIndication)( - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c:1590:10: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] - 1590 | ((T_MB_IdxEndSearchIndication)( - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:62, +or=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_lookup.c -o blasIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c: In function 'CRYPT_EncodeString': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] @@ -14038,6 +14050,30 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:253:13: note: in expansion of macro 'CORE_LOG' 253 | CORE_LOG(eLOG_Trace, "[CRYPT_Decode] Corrupt ciphertext"); | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:484:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] + 484 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:491:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] + 491 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_OneHit': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:751:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] + 751 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:758:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] + 758 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c: In function 'BLAST_PreliminarySearchEngine': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c:1365:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] + 1365 | (T_MB_IdbCheckOid)lookup_wrap->check_index_oid; + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c:1503:22: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] + 1503 | ((T_MB_IdxEndSearchIndication)( + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c:1590:10: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] + 1590 | ((T_MB_IdxEndSearchIndication)( + | ^ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c: In function 'Blast_RedoAlignmentCore_MT': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c:3003:27: warning: unused variable 'forbidden' [-Wunused-variable] 3003 | Blast_ForbiddenRanges forbidden = {0,}; @@ -14299,19 +14335,19 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_psi_priv.c -o blast_psi_priv.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_seg.c -o blast_seg.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_seqsrc.c -o blast_seqsrc.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_setup.c -o blast_setup.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c -o blast_stat.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c -o blast_util.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-p/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number': +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -W/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c:306:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 306 | else if (strcasecmp("mapper", program) == 0) | ^~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c:309:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 309 | return 0; | ^~~~~~ -d -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasnb.cpp -o objostrasnb.o +error=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_setup.c -o blast_setup.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c -o blast_stat.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c -o blast_util.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-pd -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasnb.cpp -o objostrasnb.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrasnb.cpp -o objistrasnb.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrxml.cpp -o objostrxml.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrxml.cpp -o objistrxml.o @@ -14341,19 +14377,19 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c -o phi_lookup.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_parameters.c -o blast_parameters.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_posit.c -o blast_posit.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c: In function 'SPHIPatternSearchBlkNew': +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_program.c -o blast_program.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_query_info.c -o blast_query_info.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_tune.c -o blast_tune.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_sw.c -o blast_sw.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_dynarray.c -o blast_dynarray.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/split_query.c -o split_qu/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c: In function 'SPHIPatternSearchBlkNew': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c:635:30: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 635 | localPattern[posIndex-1] = 1; | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c:411:11: note: at offset -1 into destination object 'localPattern' of size 330 411 | Uint1 localPattern[PHI_MAX_PATTERN_LENGTH]; /*local variable to hold for each position whether | ^~~~~~~~~~~~ -format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_program.c -o blast_program.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_query_info.c -o blast_query_info.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_tune.c -o blast_tune.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_sw.c -o blast_sw.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_dynarray.c -o blast_dynarray.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/split_query.c -o split_qu/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:47:54: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:47:54: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] 47 | CSocketRequest(CThreadedServer& server, SOCK sock) // NCBI_FAKE_WARNING | ^ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:33: @@ -14372,7 +14408,11 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_traceback_mt_priv.c -o blast_traceback_mt_priv.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hspstream_mt_utils.c -o blast_hspstream_mt_utils.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/boost_erf.c -o boost_erf.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -prity -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -p/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp: In member function 'virtual void ncbi::CDBLB_ServiceMapper::GetServerOptions(const std::string&, ncbi::IDBServiceMapper::TOptions*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:336:33: warning: taking address of packed member of 'SLBSM_HostLoad' may result in an unaligned pointer value [-Waddress-of-packed-member] + 336 | HINFO_Status(hinfo, &load.status); + | ^~~~~~~~~~~~ +rity -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/user_agent.cpp -o user_agent.o /bin/rm -f libxcgi.so .libxcgi.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libxcgi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lm -lpthread @@ -14381,10 +14421,6 @@ /bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcgi.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp: In member function 'virtual void ncbi::CDBLB_ServiceMapper::GetServerOptions(const std::string&, ncbi::IDBServiceMapper::TOptions*)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:336:33: warning: taking address of packed member of 'SLBSM_HostLoad' may result in an unaligned pointer value [-Waddress-of-packed-member] - 336 | HINFO_Status(hinfo, &load.status); - | ^~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -lm -lpthread -o gene_info_unit_test @@ -14402,14 +14438,6 @@ /bin/ln -f .blast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -ild/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o -/bin/rm -f libxcompress.so .libxcompress.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o lzo.o zlib.o zstd.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcompress.so -/bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcompress.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_ifconf.c -o ncbi_ifconf.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c -o ncbi_crypt.o @@ -14458,12 +14486,20 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_offline_mode.cpp -o wn_offline_mode.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_control_thread.cpp -o grid_control_thread.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_globals.cpp -o grid_globals.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_rw_impl.cpp -o gridmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_rw_impl.cpp -o gridild/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o +/bin/rm -f libxcompress.so .libxcompress.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o lzo.o zlib.o zstd.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcompress.so +/bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcompress.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_uv_nghttp2.cpp -o ncbi_uv_nghttp2.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http2_session.cpp -o ncbi_http2_session.o /bin/rm -f libxxconnect2.a .libxxconnect2.a.stamp -ar cr libxxconnect2.a ncbi_uv_nghttp2.o ncbi_http2_session.o /bin/rm -f libxxconnect2.so .libxxconnect2.so.stamp +ar cr libxxconnect2.a ncbi_uv_nghttp2.o ncbi_http2_session.o /usr/bin/g++ -std=gnu++17 -shared -o libxxconnect2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbi_uv_nghttp2.o ncbi_http2_session.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lxncbi -luv -lnghttp2 -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libxxconnect2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbi_uv_nghttp2.o ncbi_http2_session.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -luv -lnghttp2 -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libxxconnect2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbi_uv_nghttp2.o ncbi_http2_session.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -luv -lnghttp2 -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxxconnect2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libxxconnect2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxxconnect2.a @@ -14473,6 +14509,7 @@ /bin/ln -f .xxconnect2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xxconnect2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' d/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/serializable.cpp -o serializable.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/serialobject.cpp -o serialobject.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/pathhook.cpp -o pathhook.o @@ -14494,14 +14531,7 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -w -j12 --jobserver-auth=7,8 all -_rw_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/remote_app.cpp -o remote_app.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/srv_connections.cpp -o srv_connections.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netservice_api.cpp -o netservice_api.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netservice_params.cpp -o netservice_params.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api.cpp -o netschedule_api.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_submitter.cpp -o netschedule_api_submitter.o -/usr/bin/gmake[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/datatool.cpp -o datatool.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/type.cpp -o type.o @@ -14514,19 +14544,25 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/choicetype.cpp -o choicetype.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/typestr.cpp -o typestr.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/ptrstr.cpp -o ptrstr.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/incmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_executor.cpp -o netschedule_api_executor.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_reader.cpp -o netschedule_api_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_admin.cpp -o netschedule_api_admin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp -o netschedule_api_getjob.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_key.cpp -o netschedule_key.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_expt.cpp -o -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/stdstr.cpp -o stdstr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc_rw_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/remote_app.cpp -o remote_app.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/srv_connections.cpp -o srv_connections.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include 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-Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_merger.cpp -o traversal_merger.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/p=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/compound_id_v0.cpp -o compound_id_v0.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o -/bin/rm -f libxconnserv.so .libxconnserv.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxconnserv.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.o netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxthrserv -lxconnect -lxutil -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnserv.so -/bin/ln -f .xconnserv.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnserv.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o jsdlexer.o jsdparser.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxutil -lxncbi -lm -lpthread -o datatool /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -14597,46 +14624,42 @@ make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objects/medline/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objects/pub/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources cd objects/seqcode/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh general all cd objects/seq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objects/seqset/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh biblio all cd objects/scoremat/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh medline all cd objects/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pub all cd objects/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/genomecoll/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh scoremat all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqcode all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +cd objects/genomecoll/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh general all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pub all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh biblio all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqset all -cd objects/seqedit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh medline all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blast all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqcode all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh scoremat all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastdb all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqedit all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh genome_collection all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -14652,40 +14675,34 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA \ - -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ + -oc pub -or objects/pub -odi -od pub.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA \ - -oc seqset -or objects/seqset -odi -od seqset.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m general.asn -M "" -oA \ + -oc general -or objects/general -odi -od general.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd general.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' @@ -14696,8 +14713,9 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -14707,124 +14725,80 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m general.asn -M "" -oA \ - -oc general -or objects/general -odi -od general.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd general.dump \ - -datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA \ - -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA \ - -oc blast -or objects/blast -odi -od blast.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ + -oc medline -or objects/medline -odi -od medline.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ - -oc pub -or objects/pub -odi -od pub.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA \ + -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ - -oc medline -or objects/medline -odi -od medline.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA \ + -oc seqset -or objects/seqset -odi -od seqset.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA \ + -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -14834,149 +14808,149 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'. -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA \ - -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA \ + -oc blast -or objects/blast -odi -od blast.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gencoll_client all -/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gencoll_client all +/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[7]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +Waiting for /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lockmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -Waiting for /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lock/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[7]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[7]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -w -j12 --jobserver-auth=7,8 flag-stamps make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' status=0 ; \ MAKE="/usr/bin/make -w -j12 --jobserver-auth=12,14"; \ @@ -15007,12 +14981,70 @@ -ocvs -pch 'ncbi_pch.hpp' -fd seqblock.dump \ datatool: 2.23.2 -make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -w -j12 --jobserver-auth=7,8 flag-stamps +make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +p=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/compound_id_v0.cpp -o compound_id_v0.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o +/bin/rm -f libxconnserv.so .libxconnserv.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxconnserv.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.o netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxthrserv -lxconnect -lxutil -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnserv.so +/bin/ln -f .xconnserv.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnserv.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[7]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +cd objects/seqedit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -w -j12 --jobserver-auth=7,8 flag-stamps +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqedit all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[7]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA \ + -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -2.16.0+ds/c++/src/objects/seqblock' /usr/bin/make -w -j12 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqfeat MODULE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat' @@ -15033,56 +15065,55 @@ datatool: 2.23.2 make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc' /usr/bin/make -w -j12 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbmake[7]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' cd objects/seqsplit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -cd objects/submit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -cd objects/variation/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +cd objects/submit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -cd objects/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +cd objects/variation/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqsplit all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +cd objects/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources cd objects/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd objects/taxon1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqsplit all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +cd objects/taxon1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id1 all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' cd objects/blastxml/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh submit all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id2 all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh variation all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +cd objects/blastxml2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id1 all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon1 all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -cd objects/blastxml2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' cd objects/pubmed/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/eutils/efetch/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon1 all +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id2 all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml2 all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --xsd efetch all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pubmed all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -15102,17 +15133,22 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA \ - -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA \ + -oc id2 -or objects/id2 -odi -od id2.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' +.make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' File blastxml.module not found. Using defaults... /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' @@ -15123,30 +15159,22 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA \ + -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -.make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA \ - -oc submit -or objects/submit -odi -od submit.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -15156,46 +15184,8 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA \ - -oc id2 -or objects/id2 -odi -od id2.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -Acquired /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lock for PID 1267221 (make_asn) -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' +Acquired /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lock for PID 4141412 (make_asn) /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -15205,6 +15195,17 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. File blastxml2.module not found. Using defaults... /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' @@ -15215,22 +15216,49 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' -/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA \ + -oc submit -or objects/submit -odi -od submit.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -15240,117 +15268,118 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' /usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -/usr/bin/make[4] (Makefile.local_taxon.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -/usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +/usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +/usr/bin/make[4] (Makefile.local_taxon.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -15362,40 +15391,45 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.genome_collection.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' @@ -15403,88 +15437,60 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -File efetch.module not found. Using defaults... -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=efetch MODULE_PATH=objtools/eutils/efetch MODULE_ASN=efetch.xsd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m efetch.xsd -M "" -oA \ - -oc efetch -or objtools/eutils/efetch -odi -od efetch.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd efetch.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' -/usr/bin/make[4] (Makefile.gencoll_client.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +/usr/bin/make[4] (Makefile.gencoll_client.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=local_taxon -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.efetch.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1cli -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2cli -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1cli -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch TMPL=efetch -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +cd objtools/eutils/efetch/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --xsd efetch all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=gencoll_client -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' i-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src @@ -15506,8 +15512,36 @@ datatool: 2.23.2 make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +File efetch.module not found. Using defaults... +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=efetch MODULE_PATH=objtools/eutils/efetch MODULE_ASN=efetch.xsd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m efetch.xsd -M "" -oA \ + -oc efetch -or objtools/eutils/efetch -odi -od efetch.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd efetch.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seq all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +/usr/bin/make[4] (Makefile.efetch.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch TMPL=efetch -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqblock/seqblock.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' @@ -15527,6 +15561,8 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' /usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -15538,59 +15574,51 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -cd objtools/eutils/egquery/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +cd objtools/eutils/egquery/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +cd objtools/eutils/ehistory/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/eutils/ehistory/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' cd objtools/eutils/einfo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/eutils/elink/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/entrez2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +cd objtools/eutils/elink/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd egquery all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd einfo all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd ehistory all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -cd objtools/eutils/epost/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd objtools/eutils/esearch/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd objects/entrez2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +cd objtools/eutils/epost/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd elink all +cd objtools/eutils/esearch/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd egquery all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd elink all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd einfo all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd ehistory all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh entrez2 all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd epost all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' cd objtools/eutils/espell/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh entrez2 all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd esearch all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd espell all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd esearch all cd objtools/eutils/esummary/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd epost all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd espell all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -cd objtools/eutils/uilist/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd esummary all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd uilist all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -15607,15 +15635,15 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -cd objects/gbseq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd objtools/eutils/uilist/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. File einfo.module not found. Using defaults... /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=einfo MODULE_PATH=objtools/eutils/einfo MODULE_ASN=einfo.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' @@ -15628,19 +15656,66 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -File esearch.module not found. Using defaults... -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esearch MODULE_PATH=objtools/eutils/esearch MODULE_ASN=esearch.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' +File ehistory.module not found. Using defaults... +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=ehistory MODULE_PATH=objtools/eutils/ehistory MODULE_ASN=ehistory.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m esearch.dtd -M "" -oA \ - -oc esearch -or objtools/eutils/esearch -odi -od esearch.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd esearch.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m ehistory.dtd -M "" -oA \ + -oc ehistory -or objtools/eutils/ehistory -odi -od ehistory.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd ehistory.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd uilist all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +File elink.module not found. Using defaults... +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=elink MODULE_PATH=objtools/eutils/elink MODULE_ASN=elink.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m elink.dtd -M "" -oA \ + -oc elink -or objtools/eutils/elink -odi -od elink.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd elink.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +File espell.module not found. Using defaults... +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=espell MODULE_PATH=objtools/eutils/espell MODULE_ASN=espell.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m espell.dtd -M "" -oA \ + -oc espell -or objtools/eutils/espell -odi -od espell.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd espell.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' File epost.module not found. Using defaults... /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=epost MODULE_PATH=objtools/eutils/epost MODULE_ASN=epost.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' @@ -15651,9 +15726,24 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' +File esearch.module not found. Using defaults... +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esearch MODULE_PATH=objtools/eutils/esearch MODULE_ASN=esearch.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m esearch.dtd -M "" -oA \ + -oc esearch -or objtools/eutils/esearch -odi -od esearch.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd esearch.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -15663,12 +15753,9 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' +/usr/bin/make[4] (Makefile.egquery.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. File esummary.module not found. Using defaults... /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esummary MODULE_PATH=objtools/eutils/esummary MODULE_ASN=esummary.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all @@ -15680,259 +15767,175 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gbseq all -File ehistory.module not found. Using defaults... -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=ehistory MODULE_PATH=objtools/eutils/ehistory MODULE_ASN=ehistory.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m ehistory.dtd -M "" -oA \ - -oc ehistory -or objtools/eutils/ehistory -odi -od ehistory.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd ehistory.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -File elink.module not found. Using defaults... -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=elink MODULE_PATH=objtools/eutils/elink MODULE_ASN=elink.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m elink.dtd -M "" -oA \ - -oc elink -or objtools/eutils/elink -odi -od elink.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd elink.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +/usr/bin/make[4] (Makefile.ehistory.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +/usr/bin/make[4] (Makefile.einfo.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -File espell.module not found. Using defaults... -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=espell MODULE_PATH=objtools/eutils/espell MODULE_ASN=espell.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m espell.dtd -M "" -oA \ - -oc espell -or objtools/eutils/espell -odi -od espell.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd espell.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +/usr/bin/make[4] (Makefile.elink.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -File uilist.module not found. Using defaults... -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=uilist MODULE_PATH=objtools/eutils/uilist MODULE_ASN=uilist.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m uilist.dtd -M "" -oA \ - -oc uilist -or objtools/eutils/uilist -odi -od uilist.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd uilist.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' -/usr/bin/make[4] (Makefile.egquery.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +/usr/bin/make[4] (Makefile.espell.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -/usr/bin/make[4] (Makefile.einfo.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' /usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' /usr/bin/make[4] (Makefile.epost.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.esummary.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.esearch.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +/usr/bin/make[4] (Makefile.esummary.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make[4] (Makefile.espell.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -/usr/bin/make[4] (Makefile.elink.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -/usr/bin/make[4] (Makefile.ehistory.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -/usr/bin/make[4] (Makefile.uilist.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +File uilist.module not found. Using defaults... +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=uilist MODULE_PATH=objtools/eutils/uilist MODULE_ASN=uilist.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m uilist.dtd -M "" -oA \ + -oc uilist -or objtools/eutils/uilist -odi -od uilist.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd uilist.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m gbseq.asn -M "" -oA \ - -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +/usr/bin/make[4] (Makefile.uilist.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -/usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' @@ -15941,19 +15944,50 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +cd objects/gbseq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gbseq all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m gbseq.asn -M "" -oA \ + -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' cd objects/medlars/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh medlars all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars' @@ -15967,6 +16001,8 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' @@ -15984,106 +16020,110 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -cd objects/mla/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +cd objects/mla/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' cd objects/taxon3/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/valid/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -cd objects/general/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +cd objects/valid/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/seqcode/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -cd objects/blastxml/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +cd objects/general/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh mla all -cd objects/blastxml2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon3 all +cd objects/seqcode/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh valid all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/eutils/egquery/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=egquery UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +cd objects/blastxml/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +cd objects/blastxml2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon3 all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +cd objtools/eutils/egquery/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=egquery UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh valid all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' cd objtools/eutils/ehistory/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ehistory UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -cd objtools/eutils/einfo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=einfo UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +cd objtools/eutils/einfo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=einfo UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m valid.asn -M "" -oA \ + -oc valid -or objects/valid -odi -od valid.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars/medlars.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed/pubmed.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' @@ -16094,17 +16134,6 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -cd objtools/eutils/elink/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=elink UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -16114,82 +16143,77 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m valid.asn -M "" -oA \ - -oc valid -or objects/valid -odi -od valid.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -/usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' /usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -/usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' @@ -16198,12 +16222,26 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +cd objtools/eutils/elink/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=elink UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mlacli -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' cd objects/entrez2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' @@ -16211,19 +16249,17 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' cd objtools/eutils/epost/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=epost UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' cd objtools/eutils/esearch/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=esearch UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' cd objtools/eutils/espell/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=espell UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' @@ -16234,22 +16270,35 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -w -j12 --jobserver-auth=7,8 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery__.cpp -o egquery__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery___.cpp -o egquery___.o +/bin/rm -f libegquery.so .libegquery.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libegquery.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC egquery__.o egquery___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libegquery.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libegquery.so +/bin/ln -f .egquery.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.egquery.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +cd objtools/eutils/esummary/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=esummary UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory/ehistory__.cpp -o ehistory__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory/ehistory___.cpp -o ehistory___.o @@ -16259,59 +16308,25 @@ /bin/ln -f libehistory.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libehistory.so /bin/ln -f .ehistory.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ehistory.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -cd objtools/eutils/esummary/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=esummary UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery__.cpp -o egquery__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery___.cpp -o egquery___.o -/bin/rm -f libegquery.so .libegquery.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libegquery.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC egquery__.o egquery___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libegquery.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libegquery.so -/bin/ln -f .egquery.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.egquery.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o -/bin/rm -f libseqcode.so .libseqcode.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libseqcode.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqcode__.o seqcode___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libseqcode.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqcode.so -/bin/ln -f .seqcode.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqcode.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' cd objtools/eutils/uilist/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=uilist UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -cd objects/gbseq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo/einfo__.cpp -o einfo__.o @@ -16323,6 +16338,26 @@ /bin/ln -f .einfo.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.einfo.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +cd objects/gbseq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o +/bin/rm -f libseqcode.so .libseqcode.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libseqcode.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqcode__.o seqcode___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libseqcode.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqcode.so +/bin/ln -f .seqcode.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqcode.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml/blastxml__.cpp -o blastxml__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o @@ -16332,6 +16367,7 @@ /bin/ln -f libblastxml.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblastxml.so /bin/ln -f .blastxml.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastxml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell/espell__.cpp -o espell__.o @@ -16383,15 +16419,6 @@ /bin/ln -f .uilist.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.uilist.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink/elink__.cpp -o elink__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink/elink___.cpp -o elink___.o -/bin/rm -f libelink.so .libelink.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libelink.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC elink__.o elink___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libelink.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libelink.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libelink.so -/bin/ln -f .elink.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.elink.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary/esummary__.cpp -o esummary__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary/esummary___.cpp -o esummary___.o @@ -16401,8 +16428,17 @@ /bin/ln -f libesummary.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libesummary.so /bin/ln -f .esummary.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.esummary.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink/elink__.cpp -o elink__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink/elink___.cpp -o elink___.o +/bin/rm -f libelink.so .libelink.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libelink.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC elink__.o elink___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libelink.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libelink.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libelink.so +/bin/ln -f .elink.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.elink.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' cd objtools/eutils/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=eutils UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -16412,7 +16448,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/eutils.cpp -o eutils.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp -o efetch.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/einfo.cpp -o einfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/esearch.cpp -o esearch.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/egquery.cpp -o egquery.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/epost.cpp -o epost.o +/usr/bin/g+make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2__.cpp -o entrez2__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2___.cpp -o entrez2___.o /bin/rm -f libentrez2.so .libentrez2.so.stamp @@ -16425,27 +16470,28 @@ cd objects/entrez2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/eutils.cpp -o eutils.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp -o efetch.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/einfo.cpp -o einfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/esearch.cpp -o esearch.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/egquery.cpp -o egquery.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/epost.cpp -o epost.o -/usr/bin/g+make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp: In member function 'virtual ncbi::CRef ncbi::CEFetch_Request::FetchIdList(int)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp:133:12: warning: catching polymorphic type 'class ncbi::CSerialException' by value [-Wcatch-value=] 133 | catch (CSerialException) { | ^~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o +/bin/rm -f libgbseq.so .libgbseq.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libgbseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbseq__.o gbseq___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgbseq.so +/bin/ln -f .gbseq.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gbseq.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general__.cpp -o general__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general___.cpp -o general___.o @@ -16469,26 +16515,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o -/bin/rm -f libgbseq.so .libgbseq.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libgbseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbseq__.o gbseq___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgbseq.so -/bin/ln -f .gbseq.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gbseq.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' + -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/elink.cpp -o elink.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/esummary.cpp -o esummary.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/espell.cpp -o espell.o @@ -16532,25 +16568,25 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' cd objects/medline/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null -cd objects/medlars/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +cd objects/medlars/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars TMPL=medlars -w -j12 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars TMPL=medlars -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' @@ -16574,25 +16610,25 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' cd objects/pub/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null -cd objects/pubmed/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +cd objects/pubmed/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' @@ -16627,23 +16663,23 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' cd objects/seq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null -cd objects/mla/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/mla/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq TMPL=seq -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -16680,16 +16716,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Dense_seg.cpp:1214:32: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CDense_seg_Base::TNumseg' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1214 | for ( ; extra_seg < extra_segs.size() && extra_segs[extra_seg] == seg; ++new_seg, ++extra_seg) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42, - from seqfeat__.cpp:1: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'ncbi::CTempString ncbi::objects::s_AaName(int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:124:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] - 124 | if (idx > 0 && idx < ArraySize(sc_TrnaList)) { - | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'void ncbi::objects::s_SetTrnaProduct(CTrna_ext&, const std::string&, std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:186:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] - 186 | for (int i = 0; i < ArraySize(sc_TrnaList); ++i) { - | ~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/seqalign__.cpp:9: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Seq_align.cpp: In member function 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Seq_align.cpp:1382:41: warning: 'void ncbi::objects::CDense_seg::RemapToLoc(ncbi::objects::CDense_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations] @@ -16715,6 +16741,41 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Seq_align.cpp:1893:52: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CDense_seg_Base::TNumseg' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1893 | for (CDense_seg::TNumseg i = 0; i < ds.GetLens().size(); | ~~^~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42, + from seqfeat__.cpp:1: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'ncbi::CTempString ncbi::objects::s_AaName(int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:124:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] + 124 | if (idx > 0 && idx < ArraySize(sc_TrnaList)) { + | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'void ncbi::objects::s_SetTrnaProduct(CTrna_ext&, const std::string&, std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:186:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] + 186 | for (int i = 0; i < ArraySize(sc_TrnaList); ++i) { + | ~~^~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch__.cpp:282: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In function 'std::string eutils::{anonymous}::utf8_to_string(const std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:157:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 157 | catch (CStringException) { + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToUpper(StringT&) [with StringT = std::__cxx11::basic_string]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:173:14: required from here + 173 | s_ToUpper(fore_name); + | ~~~~~~~~~^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:86:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] + 86 | static const auto& s_Facet = get_ctype_facet(locale()); + | ^~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:86:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' + 86 | static const auto& s_Facet = get_ctype_facet(locale()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToLower(StringT&) [with StringT = std::__cxx11::basic_string]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:631:18: required from here + 631 | s_ToLower(databank_name); + | ~~~~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] + 77 | static const auto& s_Facet = get_ctype_facet(locale()); + | ^~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' + 77 | static const auto& s_Facet = get_ctype_facet(locale()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla__.cpp -o mla__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla___.cpp -o mla___.o @@ -16735,37 +16796,12 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mlacli -w -j12 --jobserver-auth=7,8 all -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch__.cpp:282: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In function 'std::string eutils::{anonymous}::utf8_to_string(const std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:157:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 157 | catch (CStringException) { - | ^~~~~~~~~~~~~~~~ make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToUpper(StringT&) [with StringT = std::__cxx11::basic_string]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:173:14: required from here - 173 | s_ToUpper(fore_name); - | ~~~~~~~~~^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:86:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] - 86 | static const auto& s_Facet = get_ctype_facet(locale()); - | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:86:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' - 86 | static const auto& s_Facet = get_ctype_facet(locale()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:48: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/SubSource.cpp: In function 'ncbi::objects::CCountries::EStateCleanup ncbi::objects::s_DoUSAStateCleanup(std::string&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/SubSource.cpp:4598:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 4598 | if ( j == match) continue; | ~~^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToLower(StringT&) [with StringT = std::__cxx11::basic_string]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:631:18: required from here - 631 | s_ToLower(databank_name); - | ~~~~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] - 77 | static const auto& s_Facet = get_ctype_facet(locale()); - | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' - 77 | static const auto& s_Facet = get_ctype_facet(locale()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqfeat___.cpp -o seqfeat___.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqloc___.cpp -o seqloc___.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqres___.cpp -o seqres___.o @@ -16799,16 +16835,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seqport_util.cpp:1735:40: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 1735 | if((n2 >= start_at) && (n2 < start_at + size)) | ~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_tree.cpp: In member function 'virtual void ncbi::objects::CSeq_id_Giim_Tree::FindMatchStr(const std::string&, ncbi::objects::CSeq_id_Which_Tree::TSeq_id_MatchList&) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_tree.cpp:2965:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 2965 | catch (CStringException) { - | ^~~~~~~~~~~~~~~~ -strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Wemake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla_client.cpp -o mla_client.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o /bin/rm -f libmlacli.so .libmlacli.so.stamp @@ -16818,7 +16845,16 @@ /bin/ln -f .mlacli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.mlacli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstStd(ncbi::CRef&) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_tree.cpp: In member function 'virtual void ncbi::objects::CSeq_id_Giim_Tree::FindMatchStr(const std::string&, ncbi::objects::CSeq_id_Which_Tree::TSeq_id_MatchList&) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_tree.cpp:2965:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 2965 | catch (CStringException) { + | ^~~~~~~~~~~~~~~~ +strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -We/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstStd(ncbi::CRef&) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp:1506:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 1506 | if ( row_n == p_row ) { | ~~~~~~^~~~~~~~ @@ -16846,66 +16882,66 @@ make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' cd objects/seqset/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null cd objects/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null -cd objects/genomecoll/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null -cd objects/variation/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null -cd objects/taxon1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/taxon3/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null +cd objects/genomecoll/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/variation/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +cd objects/taxon1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +cd objects/taxon3/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -16924,17 +16960,6 @@ /bin/ln -f .blastdb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3___.cpp -o taxon3___.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o -/bin/rm -f libtaxon3.so .libtaxon3.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libtaxon3.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC taxon3__.o taxon3___.o taxon3.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libtaxon3.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtaxon3.so -/bin/ln -f .taxon3.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon3.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset__.cpp -o seqset__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset___.cpp -o seqset___.o @@ -16947,60 +16972,71 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' cd objects/scoremat/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null -cd objects/seqedit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null -cd objects/seqsplit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null -cd objects/submit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/seqedit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null +cd objects/seqsplit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/submit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3___.cpp -o taxon3___.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o +/bin/rm -f libtaxon3.so .libtaxon3.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libtaxon3.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC taxon3__.o taxon3___.o taxon3.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libtaxon3.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtaxon3.so +/bin/ln -f .taxon3.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon3.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation/variation__.cpp -o variation__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation/variation___.cpp -o variation___.o @@ -17035,16 +17071,6 @@ /bin/ln -f .taxon1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1__.cpp -o id1__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1___.cpp -o id1___.o -/bin/rm -f libid1.so .libid1.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libid1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC id1__.o id1___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid1.so -/bin/ln -f .id1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id1.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit/submit__.cpp -o submit__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit/submit___.cpp -o submit___.o @@ -17078,7 +17104,40 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp -o agp_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1__.cpp -o id1__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1___.cpp -o id1___.o +/bin/rm -f libid1.so .libid1.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libid1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC id1__.o id1___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid1.so +/bin/ln -f .id1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id1.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp: In member function 'virtual void ncbi::CAgpValidateReader::OnObjectChange()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp:585:28: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] + 585 | catch(CException e){ + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef ncbi::AgpRead(CNcbiIstream&, EAgpRead_IdRule, bool, std::vector >*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp:58:12: warning: 'void ncbi::AgpRead(CNcbiIstream&, std::vector >&, EAgpRead_IdRule, bool, std::vector >*)' is deprecated [-Wdeprecated-declarations] + 58 | AgpRead(is, entries, component_id_rule, set_gap_data, component_types); + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp:33: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/agp_read.hpp:61:6: note: declared here + 61 | void AgpRead(CNcbiIstream& is, + | ^~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp: In function 'void ncbi::AgpRead(CNcbiIstream&, std::vector >&, EAgpRead_IdRule, bool, std::vector >*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp:74:12: warning: 'void ncbi::AgpRead(CNcbiIstream&, std::vector >&, EAgpRead_IdRule, bool, std::vector >*)' is deprecated [-Wdeprecated-declarations] + 74 | AgpRead(is, bioseqs, component_id_rule, set_gap_data, component_types); + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here + 52 | void AgpRead(CNcbiIstream& is, + | ^~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpErrEx::GetCount(ncbi::CAgpErr::EErrCode) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp:1708:14: warning: comparison between 'enum ncbi::CAgpErr::EErrCode' and 'enum ncbi::CAgpErrEx::' [-Wenum-compare] + 1708 | if (code < CODE_Last) { + | ~~~~~^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o /bin/rm -f libscoremat.so .libscoremat.so.stamp @@ -17099,30 +17158,13 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpErrEx::GetCount(ncbi::CAgpErr::EErrCode) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp:1708:14: warning: comparison between 'enum ncbi::CAgpErr::EErrCode' and 'enum ncbi::CAgpErrEx::' [-Wenum-compare] - 1708 | if (code < CODE_Last) { - | ~~~~~^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef ncbi::AgpRead(CNcbiIstream&, EAgpRead_IdRule, bool, std::vector >*)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp:58:12: warning: 'void ncbi::AgpRead(CNcbiIstream&, std::vector >&, EAgpRead_IdRule, bool, std::vector >*)' is deprecated [-Wdeprecated-declarations] - 58 | AgpRead(is, entries, component_id_rule, set_gap_data, component_types); - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp:33: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/agp_read.hpp:61:6: note: declared here - 61 | void AgpRead(CNcbiIstream& is, - | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp: In function 'void ncbi::AgpRead(CNcbiIstream&, std::vector >&, EAgpRead_IdRule, bool, std::vector >*)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp:74:12: warning: 'void ncbi::AgpRead(CNcbiIstream&, std::vector >&, EAgpRead_IdRule, bool, std::vector >*)' is deprecated [-Wdeprecated-declarations] - 74 | AgpRead(is, bioseqs, component_id_rule, set_gap_data, component_types); - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here - 52 | void AgpRead(CNcbiIstream& is, - | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp: In member function 'virtual void ncbi::CAgpValidateReader::OnObjectChange()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp:585:28: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] - 585 | catch(CException e){ - | ^ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +E64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/cigar.cpp -o cigar.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta.cpp -o fasta.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formats.cpp -o aln_formats.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/alnread.cpp -o alnread.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_errors.cpp -o aln_errors.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_error_reporter.cpp -o aln_error_reporter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o /bin/rm -f libseqedit.so .libseqedit.so.stamp @@ -17132,13 +17174,7 @@ /bin/ln -f .seqedit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqedit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -E64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/cigar.cpp -o cigar.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta.cpp -o fasta.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formats.cpp -o aln_formats.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/alnread.cpp -o alnread.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_errors.cpp -o aln_errors.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_error_reporter.cpp -o aln_error_reporter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o /bin/rm -f libseqsplit.so .libseqsplit.so.stamp @@ -17149,8 +17185,8 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' cd objmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null -cd objects/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +cd objects/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -17162,12 +17198,12 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -w -j12 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' @@ -17177,20 +17213,14 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/table_field.cpp -o table_field.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o -/usr/bDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp -o aln_formatguess.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp -o aln_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp -o aln_scanner.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_fastagap.cpp -o aln_scanner_fastagap.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp -o aln_scanner_clustal.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-p/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp: In member function 'bool ncbi::objects::CAlnFormatGuesser::xSampleIsClustal(TSample&, ncbi::objects::CPeekAheadStream&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp:137:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 137 | if (lineCount < sample.size()) { - | ~~~~~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp: In function 'void ncbi::objects::AlnUtil::CheckId(const std::string&, const std::vector&, int, int, bool)': +/usr/b/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp: In function 'void ncbi::objects::AlnUtil::CheckId(const std::string&, const std::vector&, int, int, bool)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp:56:28: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 56 | if ((orderedIds.size() > idCount) && | ~~~~~~~~~~~~~~~~~~^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp: In member function 'bool ncbi::objects::CAlnFormatGuesser::xSampleIsClustal(TSample&, ncbi::objects::CPeekAheadStream&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp:137:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 137 | if (lineCount < sample.size()) { + | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp: In member function 'bool ncbi::objects::CAlnFormatGuesser::xSampleIsFastaGap(const TSample&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp:176:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 176 | for ( ; i < sample.size(); ++i) { @@ -17209,19 +17239,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp:295:22: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 295 | return (dataSize == (endOffset - startOffset + 1)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'void ncbi::CAlnReader::x_VerifyAlignmentInfo(const ncbi::objects::SAlignmentFile&, TReadFlags)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:409:29: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] - 409 | for (int i=0; i< numDeflines; ++i) { - | ~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'bool ncbi::CAlnReader::x_IsGap(TNumrow, ncbi::TSeqPos, const std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:461:13: warning: comparison of integer expressions of different signedness: 'ncbi::CAlnReader::TNumrow' {aka 'int'} and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 461 | if (row > m_MiddleSections.size()) { - | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'void ncbi::CAlnReader::x_AssignDensegIds(TFastaFlags, ncbi::objects::CDense_seg&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:507:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 507 | if (i < m_DeflineInfo.size() && !m_DeflineInfo[i].mData.empty()) { - | ~~^~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp: In member function 'virtual void ncbi::objects::CAlnScanner::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': +DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp -o aln_formatguess.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp -o aln_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp -o aln_scanner.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_fastagap.cpp -o aln_scanner_fastagap.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp -o aln_scanner_clustal.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-p/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp: In member function 'virtual void ncbi::objects::CAlnScanner::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp:92:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 92 | for (auto i=0; i < mSequences.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~ @@ -17235,18 +17259,22 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp -o aln_scanner_multalign.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o -/usr/bin/g++ -std=gnu++17 -c -W/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp: In member function 'void ncbi::objects::CAlnScannerClustal::sProcessClustalDataLine(const std::vector >&, int, int, int, bool, int&)': +/usr/bin/g++ -std=gnu++17 -c -W/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'void ncbi::CAlnReader::x_VerifyAlignmentInfo(const ncbi::objects::SAlignmentFile&, TReadFlags)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:409:29: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] + 409 | for (int i=0; i< numDeflines; ++i) { + | ~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'bool ncbi::CAlnReader::x_IsGap(TNumrow, ncbi::TSeqPos, const std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:461:13: warning: comparison of integer expressions of different signedness: 'ncbi::CAlnReader::TNumrow' {aka 'int'} and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 461 | if (row > m_MiddleSections.size()) { + | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'void ncbi::CAlnReader::x_AssignDensegIds(TFastaFlags, ncbi::objects::CDense_seg&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:507:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 507 | if (i < m_DeflineInfo.size() && !m_DeflineInfo[i].mData.empty()) { + | ~~^~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp: In member function 'void ncbi::objects::CAlnScannerClustal::sProcessClustalDataLine(const std::vector >&, int, int, int, bool, int&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp:296:27: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 296 | if (currentLineLength != blockLineLength) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:129:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 129 | if (dataLineCount < mSequenceCount) { // in first block - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:210:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 210 | if (mSequenceCount != mSeqIds.size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ in/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_selector.cpp -o annot_selector.o @@ -17277,6 +17305,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:135:48: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 135 | if (!inFirstBlock && lineInBlock == expectedNumSequences) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:129:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 129 | if (dataLineCount < mSequenceCount) { // in first block + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:210:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 210 | if (mSequenceCount != mSeqIds.size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ all -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/getfeature.cpp -o getfeature.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/track_data.cpp -o track_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/reader_data.cpp -o reader_data.o @@ -17315,7 +17351,29 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +-mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_source.cpp -o data_source.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/priority.cpp -o priority.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOU/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp: In member function 'bool ncbi::objects::CFeatureTableReader_Imp::x_AddQualifierToCdregion(ncbi::CRef, ncbi::objects::CSeqFeatData&, EQual, const std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp:1279:22: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 1279 | } catch( CStringException ) { + | ^~~~~~~~~~~~~~~~ +RCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope.cpp -o scope.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/heap_scope.cpp -o heap_scope.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_impl.cpp -o scope_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reprod-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff3_location_merger.cpp -o gff3_location_merger.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gtf_location_merger.cpp -o gtf_location_merger.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff_base_columns.cpp -o gff_base_columns.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-pamake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blast__.cpp -o blast__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blast___.cpp -o blast___.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/names.cpp -o names.o @@ -17327,14 +17385,14 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' cd objects/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -17344,14 +17402,11 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -17362,74 +17417,18 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -w -j12 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j12 --jobserver-auth=7,8 all --mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_source.cpp -o data_source.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/priority.cpp -o priority.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOUmake[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp: In member function 'bool ncbi::objects::CFeatureTableReader_Imp::x_AddQualifierToCdregion(ncbi::CRef, ncbi::objects::CSeqFeatData&, EQual, const std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp:1279:22: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 1279 | } catch( CStringException ) { - | ^~~~~~~~~~~~~~~~ -RCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope.cpp -o scope.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/heap_scope.cpp -o heap_scope.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_impl.cpp -o scope_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reprodmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o -/bin/rm -f libseqalign_util.a .libseqalign_util.a.stamp -ar cr libseqalign_util.a seqalign_cmp.o seqalign_set_convert.o -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqalign_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libseqalign_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqalign_util.a -/bin/ln -f .seqalign_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqalign_util.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' --typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff3_location_merger.cpp -o gff3_location_merger.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gtf_location_merger.cpp -o gtf_location_merger.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff_base_columns.cpp -o gff_base_columns.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-pamake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blastclient.cpp -o blastclient.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o -/bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxnetblastcli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blastclient.o blastclient_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxnetblast -lxconnect -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxnetblastcli.so -/bin/ln -f .xnetblastcli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xnetblastcli.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -cd objtools/blast/services/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -th/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/vcf_reader.cpp -o vcf_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_reader.cpp -o psl_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp -o psl_data.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql.cpp -o bed_autosql.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql_standard.cpp -o bed_autosql_standard.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xGetStartsOnPlusStrand(ncbi::TSeqPos, const std::vector >&, bool, std::vector&) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xGetStartsOnPlusStrand(ncbi::TSeqPos, const std::vector >&, bool, std::vector&) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:832:21: warning: comparison of integer expressions of different signedness: 'int' and 'const long unsigned int' [-Wsign-compare] 832 | for (auto i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 144 | if (mBlockCount != mBlockSizes.size()) { @@ -17462,15 +17477,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp:505:36: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 505 | if (blockStarts.size() != blockCount) { | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o -/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp -ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_unit_test_util.a -/bin/ln -f .blast_unit_test_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_unit_test_util.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blastclient.cpp -o blastclient.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o +/bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxnetblastcli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blastclient.o blastclient_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxnetblast -lxconnect -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxnetblastcli.so +/bin/ln -f .xnetblastcli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xnetblastcli.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +cd objtools/blast/services/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -w -j12 --jobserver-auth=7,8 all ucible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_info.cpp -o scope_info.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_handle.cpp -o tse_handle.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map.cpp -o seq_map.o @@ -17478,39 +17504,36 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_annot_ci.cpp -o seq_annot_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_table_ci.cpp -o seq_table_ci.o -/usr/bimake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bimake[5]: warning: -j12 forced in submake: resetting jobserver mode. SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql_custom.cpp -o bed_autosql_custom.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_column_data.cpp -o bed_column_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp -o source_mod_parser.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_converter.cpp -o agp_converter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o -/bin/rm -f libblast_services.so .libblast_services.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libblast_services.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_services.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_services.so -/bin/ln -f .blast_services.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_services.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/struct_cmt_reader.cpp -o struct_cmt_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_reader.cpp -o mod_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_error.cpp -o mod_error.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/descr_mod_apply.cpp -o descr_mod_apply.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/feature_mod_apply.cpp -o feature_mod_apply.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/n/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp: In function 'ncbi::CRef ncbi::ExtractPssmAncillaryData(const objects::CPssmWithParameters&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp:802:66: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 802 | true)); - | ^ +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o +/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp +ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_unit_test_util.a +/bin/ln -f .blast_unit_test_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_unit_test_util.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' n/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/align_ci.cpp -o align_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_loader.cpp -o data_loader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-pat/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp: In function 'void ncbi::objects::s_GetPrimerInfo(const CSourceModParser::SMod*, const CSourceModParser::SMod*, std::vector, std::__cxx11::basic_string > >&)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-patWformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/struct_cmt_reader.cpp -o struct_cmt_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_reader.cpp -o mod_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_error.cpp -o mod_error.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/descr_mod_apply.cpp -o descr_mod_apply.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/feature_mod_apply.cpp -o feature_mod_apply.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/n/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp: In function 'void ncbi::objects::s_GetPrimerInfo(const CSourceModParser::SMod*, const CSourceModParser::SMod*, std::vector, std::__cxx11::basic_string > >&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:877:20: warning: comparison of integer expressions of different signedness: 'int' and 'const long unsigned int' [-Wsign-compare] 877 | for (int i=0; i ncbi::ExtractPssmAncillaryData(const objects::CPssmWithParameters&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp:802:66: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 802 | true)); + | ^ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client.cpp -o psg_client.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp -o psg_client_transport.o /bin/rm -f libpsg_client.so .libpsg_client.so.stamp @@ -17567,13 +17588,34 @@ /bin/ln -f .psg_client.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.psg_client.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +tection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_split_info.cpp -o tse_split_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_chunk_info.cpp -o tse_chunk_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSEmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o +/bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp +ar cr libblast_app_util.a blast_app_util.o +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_app_util.a +/bin/ln -f .blast_app_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_app_util.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' T_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_collector.cpp -o annot_collector.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_feat_handle.cpp -o seq_feat_handle.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_graph_handle.cpp -o seq_graph_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/cbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_to_enum.cpp -o mod_to_enum.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/edit_commands_impl.cpp -o edit_commands_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_edit_commands.cpp -o bioseq_edit_commands.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/bcbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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-Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/message_listener.cpp -o message_listener.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/line_error.cpp -o line_error.o /bin/rm -f libxobjread.so .libxobjread.so.stamp @@ -17583,13 +17625,7 @@ /bin/ln -f .xobjread.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjread.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/edit_commands_impl.cpp -o edit_commands_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_edit_commands.cpp -o bioseq_edit_commands.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_edit_commands.cpp -o seq_entry_edit_commands.o +uild/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_edit_commands.cpp -o seq_entry_edit_commands.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_edit_commands.cpp -o bioseq_set_edit_commands.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/edit_saver.cpp -o edit_saver.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/unsupp_editsaver.cpp -o unsupp_editsaver.o @@ -17607,109 +17643,109 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null -cd objmgr/util/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null -cd algo/dustmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null -cd algo/segmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +cd objmgr/util/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objmgr/split/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +cd algo/dustmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/segmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objmgr/split/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter.cpp -o blob_splitter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_params.cpp -o blob_splitter_params.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/split_blob.cpp -o split_blob.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_impl.cpp -o blob_splitter_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_parser.cpp -o blob_splitter_parser.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/nmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/wgsmaster.cpp -o wgsmaster.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp -o weight.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp -o sequence.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp -o feature.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/indexer.cpp -o indexer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp -o create_defline.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wnmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/wgsmaster.cpp -o wgsmaster.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o 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-I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ni-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/seqref.cpp -o seqref.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp -o blob_id.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp -o reader_id1_base.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp -o reader_id2_base.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp: In constructor 'ncbi::objects::CBlob_id::CBlob_id(ncbi::CTempString)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp:51:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] 51 | catch (CStringException) { | ^~~~~~~~~~~~~~~~ @@ -17732,41 +17768,41 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1094:52: warning: comparison of integer expressions of different signedness: 'Int4' {aka 'int'} and 'unsigned int' [-Wsign-compare] 1094 | if (((bendp - bbeginp) < 2) || (bbeginp[0] != 0xFFFFFFFF) | ~~~~~~~~~~~^~~~~~~~~~~~~ -o-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp -o objutil.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp: In function 'std::string ncbi::objects::{anonymous}::sx_ErrorSeqIds(ncbi::objects::CReaderRequestResult&, const std::vector&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp: In function 'std::string ncbi::objects::{anonymous}::sx_ErrorSeqIds(ncbi::objects::CReaderRequestResult&, const std::vector&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:1155:37: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 1155 | if (++total > kMaxErrorSeqIds) continue; | ~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:1162:23: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 1162 | if (total > kMaxErrorSeqIds) { | ~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp: In function 'void ncbi::objects::GetProteinWeights(const CBioseq_Handle&, TWeights&)': +o-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp -o objutil.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp: In function 'void ncbi::objects::GetProteinWeights(const CBioseq_Handle&, TWeights&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp:363:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 363 | } catch (CObjmgrUtilException) { | ^~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1824:61: required from here - 1824 | if (!in_html_tag && *str_iter == '<' && s_IsTagStart(str_iter, str.end())) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1752:57: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] - 1752 | for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'int ncbi::CSeqDBVol::GetAmbigPartialSeq(int, char**, int, ncbi::ESeqDBAllocType, ncbi::CSeqDB::TSequenceRanges*, ncbi::CSeqDB::TSequenceRanges*) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:1542:50: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 1542 | if ((*partial_ranges)[num_ranges - 1].second > base_length) { /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp: In function 'bool ncbi::objects::sequence::BadSeqLocSortOrder(const ncbi::objects::CBioseq_Handle&, const ncbi::objects::CSeq_loc&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:612:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] 612 | } catch (CException) { | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'int ncbi::CSeqDBVol::GetAmbigPartialSeq(int, char**, int, ncbi::ESeqDBAllocType, ncbi::CSeqDB::TSequenceRanges*, ncbi::CSeqDB::TSequenceRanges*) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:1542:50: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 1542 | if ((*partial_ranges)[num_ranges - 1].second > base_length) { /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'int ncbi::CSeqDBVol::x_GetSequence(int, const char**) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:1785:24: warning: comparing the result of pointer addition '((* buffer) + -1)' and NULL [-Waddress] 1785 | if (! (*buffer - 1)) return -1; | ~~~~~~~~~^~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1824:61: required from here + 1824 | if (!in_html_tag && *str_iter == '<' && s_IsTagStart(str_iter, str.end())) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1752:57: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] + 1752 | for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'void ncbi::CSeqDBVol::GetRawSeqAndAmbig(int, const char**, int*, int*) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:2998:11: warning: variable 'map_end' set but not used [-Wunused-but-set-variable] 2998 | TIndx map_end = 0; @@ -17789,9 +17825,6 @@ /bin/ln -f .xalgodustmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgodustmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1114:13: warning: 'bool ncbi::objects::s_IsValidAccession(const std::string&)' defined but not used [-Wunused-function] - 1114 | static bool s_IsValidAccession(const string& acc) - | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp: In function 'ncbi::CRef ncbi::objects::sequence::SourceToProduct(const ncbi::objects::CSeq_feat&, const ncbi::objects::CSeq_loc&, TS2PFlags, ncbi::objects::CScope*, int*)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:814:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 814 | } catch (CObjmgrUtilException) { @@ -17803,14 +17836,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:862:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 862 | } catch (CObjmgrUtilException) { | ^~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp:2436:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 2436 | if (offset > 0 && offset < m_MainTitle.length()) { - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1114:13: warning: 'bool ncbi::objects::s_IsValidAccession(const std::string&)' defined but not used [-Wunused-function] + 1114 | static bool s_IsValidAccession(const string& acc) + | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp: In member function 'ncbi::CRef ncbi::objects::SRelLoc::Resolve(const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*, TFlags) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:4763:22: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 4763 | } catch (CObjmgrUtilException) { | ^~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp:2436:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 2436 | if (offset > 0 && offset < m_MainTitle.length()) { + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp: In instantiation of 'void ncbi::objects::x_Translate(const Container&, std::string&, int, const CGenetic_code*, bool, bool, bool, bool, bool*) [with Container = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string]': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:4103:16: required from here 4103 | x_Translate(seq, prot, 0, code, @@ -17897,35 +17933,36 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' @@ -17934,8 +17971,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp -o writedb_volume.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp -o writedb_files.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp -o writedb_isam.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANTmake[5]: warning: -j12 forced in submake: resetting jobserver mode. - -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o writedb_gimask.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o writedb_gimask.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp -o writedb_convert.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp -o writedb_general.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o @@ -17953,8 +17989,8 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o /bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp -ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o /bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp +ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lid2 -lseqsplit -lid1 -lseqset -lseq -lgeneral -lxser -lxconnect -lxcompress -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lid2 -lseqsplit -lid1 -lseqset -lseq -lgeneral -lxser -lxconnect -lxcompress -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader.a @@ -17968,31 +18004,31 @@ cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -18023,12 +18059,12 @@ cd objtools/alnmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' @@ -18036,36 +18072,38 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -18075,15 +18113,24 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alndimake[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alndimake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp -o mask_fasta_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/repmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/rep/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp: In function 'ncbi::objects::SCacheInfo::TParams* ncbi::objects::GetDriverParams(SCacheInfo::TParams*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1538:19: warning: possibly dangling reference to a temporary [-Wdangling-reference] + 1538 | const string& driver_name = + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1539:39: note: the temporary was destroyed at the end of the full expression 'ncbi::objects::SPluginParams::SetDefaultValue(params, std::__cxx11::basic_string(((const char*)"driver"), std::allocator()), ((const char*)"bdb"))' + 1539 | SPluginParams::SetDefaultValue(params, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ + 1540 | NCBI_GBLOADER_READER_CACHE_PARAM_DRIVER, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1541 | "bdb"); + | ~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o @@ -18112,18 +18159,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/buil/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp: In function 'ncbi::objects::SCacheInfo::TParams* ncbi::objects::GetDriverParams(SCacheInfo::TParams*)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1538:19: warning: possibly dangling reference to a temporary [-Wdangling-reference] - 1538 | const string& driver_name = - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1539:39: note: the temporary was destroyed at the end of the full expression 'ncbi::objects::SPluginParams::SetDefaultValue(params, std::__cxx11::basic_string(((const char*)"driver"), std::allocator()), ((const char*)"bdb"))' - 1539 | SPluginParams::SetDefaultValue(params, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ - 1540 | NCBI_GBLOADER_READER_CACHE_PARAM_DRIVER, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1541 | "bdb"); - | ~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/buil/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] 52 | objects::CFastaReader::fAllSeqIds; | ^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35: @@ -18136,14 +18172,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/fasta.hpp:93:9: note: declared here 93 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o gene_info_reader -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_reader -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=tax4blast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function 'static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef&, const ncbi::CRef&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:76:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 76 | match1->m_ChainScore == match2->m_ChainScore && @@ -18166,12 +18194,20 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 199 | strand2 != eNa_strand_minus)) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ESegmentTrimFlag)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:1475:35: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CAlnMap::TNumrow' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1475 | for (TNumrow row = 0; row < selected_rows.size(); row++) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o gene_info_reader +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_reader +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=tax4blast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' @@ -18180,6 +18216,33 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +-mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp -o writedb_lmdb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/seqidlist_writer.cpp -o seqidlist_writer.o +/bin/rm -f libwritedb.so .libwritedb.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libwritedb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o writedb_lmdb.o seqidlist_writer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16./build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable] + 306 | unsigned long tmp; + | ^~~ +0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libwritedb.so +/bin/ln -f .writedb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.writedb.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); @@ -18208,34 +18271,33 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:49:74: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] 49 | CSeqFormatterConfig config /* = CSeqFormatterConfig() */) | ^ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blast_services_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_services_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { | ^~~~~~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=writedb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:270:72: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] 270 | void CSeqFormatter::DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config) | ^ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable] - 306 | unsigned long tmp; - | ^~~ --mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp -o writedb_lmdb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/seqidlist_writer.cpp -o seqidlist_writer.o -/bin/rm -f libwritedb.so .libwritedb.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libwritedb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o writedb_lmdb.o seqidlist_writer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libwritedb.so -/bin/ln -f .writedb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.writedb.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /usr/include/c++/14/vector:66, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:44, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -18258,14 +18320,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:129:19: note: 'l_anchor_index' was declared here 129 | TNumseg l_anchor_index, r_anchor_index, anchor_index; | ^~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(TSeqData&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:47: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] 658 | string idstr = objects::sequence::GetTitle( bsh ); @@ -18274,18 +18328,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:290:8: note: declared here 290 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); | ^~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blast_services_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_services_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 311 | if (plus && prev_start_plus_len < start || - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=writedb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o +/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp +ar cr libncbi_xreader_id2.a reader_id2.o +/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ) +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.a +/bin/ln -f .ncbi_xreader_id2-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.so +/bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' @@ -18294,6 +18351,12 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 311 | if (plus && prev_start_plus_len < start || + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ roducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o @@ -18305,26 +18368,6 @@ /bin/ln -f .seqmasks_io.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqmasks_io.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_demo -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_demo -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' cd algo/winmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -18334,7 +18377,13 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j12 --jobserver-auth=7,8 all +d/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-pr/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o @@ -18342,28 +18391,21 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncb/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:691:40: warning: 'second_row_fits' may be used uninitialized [-Wmaybe-uninitialized] - 691 | second_row_fits != eIgnoreMatch) { - | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/incmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/tax4blast.cpp -o tax4blast.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tax4blast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lsqlitewrapp -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lsqlite3 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tax4blast /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tax4blast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:155:20: note: 'second_row_fits' was declared here - 155 | TSecondRowFits second_row_fits; - | ^~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null -i-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/incmake[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -18373,37 +18415,6 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -d/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-prmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o -/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp -ar cr libncbi_xreader_id2.a reader_id2.o -/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ) -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.a -/bin/ln -f .ncbi_xreader_id2-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.so -/bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'void CSeqDBPerfApp::x_UpdateMemoryUsage(int)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:114:23: warning: 'bool ncbi::GetMemoryUsage(size_t*, size_t*, size_t*)' is deprecated [-Wdeprecated-declarations] 114 | if (GetMemoryUsage(&mu.total, &mu.resident, &mu.shared)) { @@ -18416,26 +18427,36 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:154:31: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 154 | for (ssize_t i = 0; i < oids2iterate.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, EAlgorithm)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 136 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, EAlgorithm)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 300 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o -/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o -/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o -/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o -/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o -/bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_demo +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_demo +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:691:40: warning: 'second_row_fits' may be used uninitialized [-Wmaybe-uninitialized] + 691 | second_row_fits != eIgnoreMatch) { + | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:155:20: note: 'second_row_fits' was declared here + 155 | TSecondRowFits second_row_fits; + | ^~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o /bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp -/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp ar cr libncbi_xreader_id1.a reader_id1.o +/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid1 -lseq -lgeneral -lxser -lxconnect -lxutil -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid1 -lseq -lgeneral -lxser -lxconnect -lxutil -lxncbi -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id1.a @@ -18448,38 +18469,73 @@ cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_tax4blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -ds/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgoblastdbindex.so -/bin/ln -f .xalgoblastdbindex.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgoblastdbindex.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, EAlgorithm)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 136 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, EAlgorithm)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 300 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o +/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp +ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o +/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ) +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_cache.a +/bin/ln -f .ncbi_xreader_cache-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_cache.so +/bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -lude /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o +/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o +/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o +/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o +/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o +/bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgoblastdbindex.so +/bin/ln -f .xalgoblastdbindex.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgoblastdbindex.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_perf /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -18497,6 +18553,22 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +lude /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/b/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::string&, const ncbi::IAlnExplorer::TSignedRange&, bool) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: 'ncbi::COpenRange::position_type' {aka 'int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] + 702 | if (translate && aln_range.GetLength() >= trim_from + trim_to) { + | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o @@ -18508,7 +18580,6 @@ /bin/ln -f libblastdb_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblastdb_format.so /bin/ln -f .blastdb_format.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastdb_format.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -awk: cannot open "make_blastdb_format.log.new" (No such file or directory) make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' @@ -18519,57 +18590,28 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/b/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::string&, const ncbi::IAlnExplorer::TSignedRange&, bool) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: 'ncbi::COpenRange::position_type' {aka 'int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] - 702 | if (translate && aln_range.GetLength() >= trim_from + trim_to) { - | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o -/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp -/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp -ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ) -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_cache.a -/bin/ln -f .ncbi_xreader_cache-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_cache.so -/bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -uild/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp -o writedb_lmdb_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie writedb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o writedb_lmdb_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/writedb_lmdb_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +uild/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_tax4blast_unit_test.cpp -o seqdb_tax4blast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_tax4blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lsqlitewrapp -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_tax4blast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_tax4blast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/alnmgr/sparse_aln.hpp:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:34: In member function 'ncbi::CAlignRangeCollExtender::position_type ncbi::CAlignRangeCollExtender::GetSecondFrom() const [with TColl = ncbi::CAlignRangeCollectionList >]', @@ -18756,20 +18798,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter | ^~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_tax4blast_unit_test.cpp -o seqdb_tax4blast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_tax4blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lsqlitewrapp -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_tax4blast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_tax4blast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp -o seqdb_lmdb_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_lmdb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_lmdb_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp:130:39: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] 130 | string id_str = sequence::GetTitle( bsh ); @@ -18778,6 +18806,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:290:8: note: declared here 290 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); | ^~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp -o seqdb_lmdb_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_lmdb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_lmdb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o mkindex_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makembindex +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makembindex +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' otector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_ci.cpp -o sparse_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alntext.cpp -o alntext.o @@ -18790,14 +18833,6 @@ /bin/ln -f .xalnmgr.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalnmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o mkindex_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makembindex -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makembindex -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp -o seq_formatter_unit_test.o @@ -18872,7 +18907,11 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/bl2seq.cpp -o bl2seq.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_objmgr_tools.cpp -o blast_objmgr_tools.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-bl/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp: In member function 'bool ncbi::blast::CRemoteBlast::LoadFromArchive()': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-bl/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CLocalBlast::Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp:207:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 207 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp: In member function 'bool ncbi::blast::CRemoteBlast::LoadFromArchive()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:1660:19: warning: ignoring return value of 'bool std::vector<_Tp, _Alloc>::empty() const [with _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]', declared with attribute 'nodiscard' [-Wunused-result] 1660 | m_Errs.empty(); | ~~~~~~~~~~~~^~ @@ -18896,19 +18935,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_db_adapter.cpp -o local_db_adapter.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -Omake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o writedb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/writedb_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CLocalBlast::Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp:207:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 207 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); - | ^ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -Omake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp -o gbnative.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o @@ -18917,34 +18944,15 @@ /bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp ar cr libncbi_xloader_genbank.a gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o /bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_immake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch__.cpp -o efetch__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch___.cpp -o efetch___.o -/bin/rm -f libefetch.so .libefetch.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libefetch.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC efetch__.o efetch___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libefetch.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libefetch.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libefetch.so -/bin/ln -f .efetch.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.efetch.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -cd objtools/edit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=edit UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gene_utils.cpp -o gene_utils.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp -o seq_entry_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp -o promote.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/autodef_with_tax.cpp -o autodef_with_tax.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/field_handler.cpp -o field_handler.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/apply_object.cpp pl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lpsg_client -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnserv -lxcompress -lxser -lxthrserv -lxxconnect2 -lsequtil -lxconnect -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread ) +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_immake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o writedb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/writedb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +pl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lpsg_client -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnserv -lxcompress -lxser -lxthrserv -lxxconnect2 -lsequtil -lxconnect -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_genbank.a /bin/ln -f .ncbi_xloader_genbank-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_genbank-static.dep @@ -18954,23 +18962,20 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' cd objtools/align_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/simple/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/dustmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/simple/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/winmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/dustmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +cd app/winmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' @@ -18980,35 +18985,44 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_iteration.cpp -o psiblast_iteration.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psi_pssm_input.cpp -o psi_pssm_input.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_advprot_options.cpp -o blastmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/format_flags.cpp -o format_flags.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/align_format_util.cpp -o align_format_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/showdefline.cpp -o showdefline.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/showalign.cpp -o showalign.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/tabular.cpp -o tabular.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reprod/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ReadAsciiMsa(ncbi::CNcbiIstream&)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reprod2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_iteration.cpp -o psiblast_iteration.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psi_pssm_input.cpp -o psi_pssm_input.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast_advprot_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blastp_kmer_options.cpp -o blastp_kmer_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/version.cpp -o version.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ReadAsciiMsa(ncbi::CNcbiIstream&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:125:20: warning: 'void ncbi::CAlnReader::Read(bool, bool, ncbi::objects::ILineErrorListener*)' is deprecated [-Wdeprecated-declarations] 125 | reader.Read(false, true); | ~~~~~~~~~~~^~~~~~~~~~~~~ @@ -19020,66 +19034,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:376:22: warning: comparison of integer expressions of different signedness: 'int' and 'Uint4' {aka 'unsigned int'} [-Wsign-compare] 376 | while (k < m_Msa->dimensions->query_length && | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -_advprot_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blastp_kmer_options.cpp -o blastp_kmer_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/version.cpp -o version.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In constructor 'ncbi::objects::edit::CSeqIdGuesser::CSeqIdGuesser(ncbi::objects::CSeq_entry_Handle)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:92:48: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] - 92 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); - | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/serialbase.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/general/Dbtag_.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/general/Dbtag.hpp:44, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:31: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here - 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, - | ^~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In static member function 'static std::vector > ncbi::objects::edit::CSeqIdGuesser::GetIdStrings(ncbi::objects::CBioseq_Handle)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:171:44: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] - 171 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); - | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here - 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, - | ^~~~ --o apply_object.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/string_constraint.cpp -o string_constraint.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp -o seqid_guesser.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/dblink_field.cpp -o dblink_field.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/struc_comm_field.cpp -o struc_comm_field.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_desc_field.cpp -o text_desc_field.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gb_block_field.cpp -o gb_block_field.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wn/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp: In member function 'void ncbi::align_format::CVecscreen::x_MergeSeqalign(ncbi::objects::CSeq_align_set&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CRemoteBlast::GetResultSet()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:2238:99: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 2238 | (new CBlastAncillaryData(lambdas, Ks, Hs, effective_search_space, m_Task == "psiblast")); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp: In member function 'void ncbi::align_format::CVecscreen::x_MergeSeqalign(ncbi::objects::CSeq_align_set&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp:448:35: warning: unused variable 'da' [-Wunused-variable] 448 | const CSeq_align& da = *x_OrigAlignsById[*di]; | ^~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp: In member function 'void ncbi::objects::edit::CPromote::x_PromoteCdregion(ncbi::objects::CSeq_feat&, TRnaMap*) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:224:51: warning: 'static void ncbi::objects::CCdregion_translate::TranslateCdregion(std::string&, const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, bool, bool, bool*, ETranslationLengthProblemOptions)' is deprecated [-Wdeprecated-declarations] - 224 | CCdregion_translate::TranslateCdregion(data, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ - 225 | feat, - | ~~~~~ - 226 | x_Scope(), - | ~~~~~~~~~~ - 227 | include_stop, - | ~~~~~~~~~~~~~ - 228 | remove_trailingX); - | ~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:52: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:966:17: note: declared here - 966 | static void TranslateCdregion(string& prot, - | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/align_format_util.cpp: In static member function 'static void ncbi::align_format::CAlignFormatUtil::AddSpace(ncbi::CNcbiOstream&, size_t)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/align_format_util.cpp:810:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 810 | for(auto i=0; i ncbi::blast::CRemoteBlast::GetResultSet()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:2238:99: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 2238 | (new CBlastAncillaryData(lambdas, Ks, Hs, effective_search_space, m_Task == "psiblast")); - | ^ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple/simple_om.cpp -o simple_om.o /bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp @@ -19093,50 +19059,20 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/showalign.cpp:2113:33: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] 2113 | } catch (CException e){ | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::ConvertRawToDeltaByNs(ncbi::objects::CSeq_inst&, size_t, int, size_t, int, bool, int, int, int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1850:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 1850 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { - | ~~~~~~^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1852:74: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 1852 | } else if (n_len >= min_known && (max_known < 0 || n_len <= max_known)) { - | ~~~~~~^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1875:63: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 1875 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { - | ~~~~~~^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1877:66: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 1877 | } else if (n_len >= min_known && (max_known < 0 || n_len <= max_known)) { - | ~~~~~~^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::UpdateSeqLength(ncbi::CAutoInitRef&, ncbi::objects::CBioseq_Handle&, ncbi::objects::CSeqMap_CI&, ncbi::objects::CSeq_inst_Base::TLength&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqSubMap' not handled in switch [-Wswitch] - 2458 | switch (seqmap_ci.GetType()) { - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqRef' not handled in switch [-Wswitch] -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqEnd' not handled in switch [-Wswitch] -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqChunk' not handled in switch [-Wswitch] -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqLiteral' not handled in switch [-Wswitch] ds/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/traceback_stage.cpp -o traceback_stage.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/uniform_search.cpp -o uniform_search.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_search.cpp -o local_search.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'bool ncbi::objects::edit::s_FindSegment(const ncbi::objects::CDense_seg&, ncbi::objects::CDense_seg_Base::TDim, ncbi::TSeqPos, ncbi::objects::CDense_seg_Base::TNumseg&, ncbi::TSeqPos&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2881:21: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] - 2881 | if (pos >= start && pos < start + len) { - | ~~~~^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2881:39: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] - 2881 | if (pos >= start && pos < start + len) { - | ~~~~^~~~~~~~~~~~~ -o-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp -o link_cds_mrna.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp -o cds_fix.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/loc_edit.cpp -o loc_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/mail_report.cpp -o mail_report.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feattable_edit.cpp -o feattable_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gaps_edit.cpp -o gaps_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -s/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp: In constructor 'ncbi::blast::CBlastAncillaryData::CBlastAncillaryData(std::pair, std::pair, std::pair, Int8, bool)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp:117:1: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 117 | CBlastAncillaryData::CBlastAncillaryData(pair lambda, - | ^~~~~~~~~~~~~~~~~~~ +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+dsmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker/main.cpp -o main.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o dust_mask_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgodustmask -lseqmasks_io -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lseqdb -lblastdb -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o dustmasker +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/dustmasker +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/main.cpp -o main.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o @@ -19146,116 +19082,40 @@ /bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/windowmasker make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker/main.cpp -o main.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o dust_mask_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgodustmask -lseqmasks_io -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lseqdb -lblastdb -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o dustmasker -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/dustmasker -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -pecs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/source_edit.cpp -o source_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp -o rna_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/remote_updater.cpp -o remote_updater.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/eutils_updater.cpp -o eutils_updater.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp -o parse_text_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/publication_edit.cpp -o publication_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fs/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp: In function 'bool ncbi::objects::edit::AdjustForCDSPartials(const ncbi::objects::CSeq_feat&, ncbi::objects::CSeq_entry_Handle)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:457:57: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] - 457 | any_change |= AdjustProteinMolInfoToMatchCDS((*it)->SetMolinfo(), cds); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here - 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:463:39: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] - 463 | AdjustProteinMolInfoToMatchCDS(new_molinfo_desc->SetMolinfo(), cds); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here - 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp: In member function 'bool ncbi::objects::edit::CFindITSParser::IsLengthTooLarge(const std::string&, int, int, const std::vector&, const std::vector&, const std::vector&, int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp:259:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 259 | for (int j = i + 1; j < spans.size(); j++) - | ~~^~~~~~~~~~~~~~ /c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_search.cpp -o remote_search.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/query_data.cpp -o query_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/objmgr_query_data.cpp -o objmgr_query_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I//build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp: In function 'ncbi::SIZE_TYPE ncbi::objects::edit::FindWithOptions(const std::string&, const std::string&, ncbi::SIZE_TYPE, bool, bool)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp:47:25: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] - 47 | pos = NStr::Find(str, pattern, pos, NPOS, NStr::eFirst, str_case); - | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/edit/parse_text_options.hpp:34, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp:33: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here - 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, - | ^~~~ -build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_blk.cpp -o split_query_blk.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/winmask_filter.cpp -o winmask_filter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_Omake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I//build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp: In constructor 'ncbi::blast::CBlastAncillaryData::CBlastAncillaryData(std::pair, std::pair, std::pair, Int8, bool)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp:117:1: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 117 | CBlastAncillaryData::CBlastAncillaryData(pair lambda, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -FFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/subj_ranges_set.cpp -o subj_ranges_set.o +build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_blk.cpp -o split_query_blk.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/winmask_filter.cpp -o winmask_filter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/subj_ranges_set.cpp -o subj_ranges_set.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/rpsblast_local.cpp -o rpsblast_local.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seedtop.cpp -o seedtop.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/cdd_pssm_input.cpp -o cdd_pssm_input.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/deltablast_options.cpp -o deltablast_options.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/deltablast.cpp -o deltablast.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_object_description.cpp:336:15: warning: 'std::string ncbi::objects::edit::GetTextObjectDescription(const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, const std::string&)' defined but not used [-Wunused-function] - 336 | static string GetTextObjectDescription(const CSeq_feat& seq_feat, CScope& scope, const string& product) - | ^~~~~~~~~~~~~~~~~~~~~~~~ -tack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gap_trim.cpp -o gap_trim.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/external_annots.cpp -o external_annots.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feature_propagate.cpp -o feature_propagate.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_object_description.cpp -o text_object_description.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_edit.cpp -o seq_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/pub_fix.cpp -o pub_fix.o -/bin/rm -f libxobjedit.so .libxobjedit.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxobjedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_utils.o /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp: In member function 'int ncbi::blast::CMagicBlast::x_Run()': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp: In member function 'int ncbi::blast::CMagicBlast::x_Run()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp:148:65: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 148 | tmp_pair, 0)); | ^ -seq_entry_edit.o promote.o autodef_with_tax.o field_handler.o apply_object.o string_constraint.o seqid_guesser.o dblink_field.o struc_comm_field.o text_desc_field.o gb_block_field.o link_cds_mrna.o cds_fix.o loc_edit.o mail_report.o feattable_edit.o gaps_edit.o source_edit.o rna_edit.o remote_updater.o eutils_updater.o parse_text_options.o publication_edit.o gap_trim.o external_annots.o feature_propagate.o text_object_description.o seq_edit.o pub_fix.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjutil -ltaxon3 -lvalid -lxlogging -leutils -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxobjedit.so -/bin/ln -f .xobjedit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjedit.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -cd objtools/cleanup/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp -o autogenerated_extended_cleanup.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp -o cleanup.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_utils.cpp -o cleanup_utils.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/gene_qual_normalization.cpp -o gene_qual_normalization.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp -o cleanup_user_object.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_author.cpp -o cleanup_author.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_pub.cpp -o cleanup_pub.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp -o capitalization_string.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/fix_feature_id.cpp -o fix_feature_id.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blasNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o +NCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp -o magicblast.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_node.cpp -o blast_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_usage_report.cpp -o blast_usage_report.o @@ -19288,20 +19148,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp: In static member function 'static bool ncbi::objects::CCleanup::s_AddNumToUserField(ncbi::objects::CUser_field&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:398:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 398 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetStrs().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:404:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 404 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetInts().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:410:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 410 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetReals().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:416:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector*>::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 416 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetOss().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -eproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-patheproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libxblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxblast.so /bin/ln -f .xblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xblast.dep @@ -19316,15 +19163,15 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19347,11 +19194,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/rmblastn_args.cpp -o rmblastn_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blastx_args.cpp -o blastx_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/tblastn_args.cpp -o tblastn_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::x_HasShortIntron(const ncbi::objects::CSeq_loc&, size_t)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp:2875:68: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] - 2875 | if (abs((long int)this_start - (long int)prev_end) < min_len) { - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp: In member function 'void ncbi::blast::CMinHashFile::GetMinHits(int, int&, std::vector&) const': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp: In member function 'void ncbi::blast::CMinHashFile::GetMinHits(int, int&, std::vector&) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp:77:25: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 77 | if (hits.size() < numHashes) | ~~~~~~~~~~~~^~~~~~~~~~~ @@ -19380,56 +19223,56 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' cd algo/blast/igblast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19437,40 +19280,40 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j12 --jobserver-auth=7,8 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19498,6 +19341,7 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp: In member function 'virtual void ncbi::blast::CMapperMTArgs::ExtractAlgorithmOptions(const ncbi::CArgs&, ncbi::blast::CBlastOptions&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp:205:59: warning: 'unsigned int ncbi::GetCpuCount()' is deprecated [-Wdeprecated-declarations] 205 | const int kMaxValue = static_cast(GetCpuCount()); @@ -19512,7 +19356,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:479:14: note: declared here 479 | unsigned int GetCpuCount(void) | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:452:29: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] 452 | options->SetFilterString("L"); /* NCBI_FAKE_WARNING */ @@ -19530,38 +19373,46 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:760:10: warning: unused variable 'subject_length' [-Wunused-variable] 760 | Int4 subject_length = subject_blk->length; | ^~~~~~~~~~~~~~ +h-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o +/bin/rm -f libblastinput.so .libblastinput.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libblastinput.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlitewrapp -lscoremat -lsqlite3 -llmdb -lpthread -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libblastinput.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblastinput.so +/bin/ln -f .blastinput.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastinput.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdiag_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastdiag_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdiag_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j12 --jobserver-auth=7,8 all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -h-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o -/bin/rm -f libblastinput.so .libblastinput.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libblastinput.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlitewrapp -lscoremat -lsqlite3 -llmdb -lpthread -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblastinput.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/l/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j12 --jobserver-auth=7,8 all -ibblastinput.so -/bin/ln -f .blastinput.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastinput.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::RemoteOptionsTest::test_method()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:73:47: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] @@ -19579,13 +19430,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); | ^~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j12 --jobserver-auth=7,8 all /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testRemoteFilterString::test_method()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1329:28: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] 1329 | opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */ @@ -19657,12 +19501,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here 178 | NCBI_DEPRECATED char* GetFilterString() const; | ^~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastextend_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastextend_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxconnect -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o gapinfo_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gapinfo_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -19682,10 +19525,26 @@ /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastengine_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastextend_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastextend_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19693,6 +19552,8 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o @@ -19701,7 +19562,7 @@ /bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/aalookup_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19710,24 +19571,14 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxconnect -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o gapinfo_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gapinfo_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie aascan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o aascan_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/aascan_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19738,14 +19589,6 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19766,24 +19609,6 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o proteinkmer_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/proteinkmer_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o /bin/rm -f libigblast.so .libigblast.so.stamp @@ -19793,7 +19618,7 @@ /bin/ln -f .igblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.igblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19802,16 +19627,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o hspfilter_culling_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspfilter_culling_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o proteinkmer_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/proteinkmer_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19820,7 +19645,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o @@ -19829,7 +19654,7 @@ /bin/ln -f hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspfilter_besthit_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19838,7 +19663,8 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o gencode_singleton_unit_test @@ -19846,7 +19672,16 @@ /bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gencode_singleton_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o hspfilter_culling_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspfilter_culling_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19856,8 +19691,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastoptions_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastoptions_unit_test @@ -19913,13 +19756,16 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie linkhsp_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o linkhsp_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/linkhsp_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch__.cpp -o efetch__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch___.cpp -o efetch___.o +/bin/rm -f libefetch.so .libefetch.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libefetch.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC efetch__.o efetch___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libefetch.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libefetch.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libefetch.so +/bin/ln -f .efetch.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.efetch.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19931,15 +19777,13 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -t+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_message.cpp -o cleanup_message.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/influenza_set.cpp -o influenza_set.o -/bin/rm -f libxcleanup.so .libxcleanup.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxcleanup.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o gene_qual_normalization.o cleanup_user_object.o cleanup_author.o cleanup_pub.o newcleanupp.o capitalization_string.o fix_feature_id.o cleanup_message.o influenza_set.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxobjutil -lvalid -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre2-8 -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcleanup.so -/bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcleanup.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie linkhsp_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o linkhsp_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/linkhsp_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19988,10 +19832,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o prelimsearch_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/prelimsearch_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o ntscan_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/ntscan_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=rmblast_blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20006,10 +19850,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psiblast_iteration_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_iteration_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o phiblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/phiblast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=rmblast_traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20024,10 +19868,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o phiblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/phiblast_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastsetup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastsetup_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastsetup_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20042,46 +19886,46 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o ntscan_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/ntscan_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psiblast_iteration_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_iteration_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psibl2seq_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psibl2seq_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastsetup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastsetup_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastsetup_unit_test +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psibl2seq_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psibl2seq_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o prelimsearch_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/prelimsearch_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20114,10 +19958,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie optionshandle_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o optionshandle_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/optionshandle_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o querydata_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/querydata_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20132,10 +19976,14 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp -o rmblast_blasthits_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rmblast_blasthits_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_blasthits_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie optionshandle_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o optionshandle_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/optionshandle_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20150,14 +19998,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o queryinfo_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/queryinfo_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp -o rmblast_blasthits_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rmblast_blasthits_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_blasthits_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20169,29 +20013,29 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o querydata_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/querydata_unit_test +lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o pssmcreate_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/pssmcreate_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o pssmcreate_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/pssmcreate_unit_test +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o queryinfo_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/queryinfo_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20206,10 +20050,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o scoreblk_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/scoreblk_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp -o rmblast_traceback_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rmblast_traceback_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_traceback_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20224,10 +20068,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp -o rmblast_traceback_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rmblast_traceback_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_traceback_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rps_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rps_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20239,18 +20083,18 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rps_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rps_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o seqinfosrc_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqinfosrc_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j12 --jobserver-auth=7,8 all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20260,10 +20104,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o seqinfosrc_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqinfosrc_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o scoreblk_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/scoreblk_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20293,50 +20137,36 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o search_strategy_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/search_strategy_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd objtools/format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/accession_item.cpp -o accession_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/basecount_item.cpp -o basecount_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/comment_item.cpp -o comment_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/contig_item.cpp -o contig_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/date_item.cpp -o date_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/dbsmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp -o subj_ranges_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie subj_ranges_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o subj_ranges_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/subj_ranges_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp -o seqsrc_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp -o seqsrc_mock.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp -o mockseqsrc1_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp -o mockseqsrc2_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqsrc_unit_test.o seqsrc_mock.o mockseqsrc1_unit_test.o mockseqsrc2_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqsrc_unit_test.o seqsrc_mock.o mockseqsrc1_unit_test.o mockseqsrc2_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lx/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. algoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o seqsrc_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqsrc_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd objtools/edit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=edit UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gene_utils.cpp -o gene_utils.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp -o seq_entry_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp -o promote.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/autodef_with_tax.cpp -o autodef_with_tax.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/field_handler.cpp -o field_handler.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/apply_object.cpp make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie setupfactory_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o setupfactory_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -20344,44 +20174,109 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o search_strategy_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/search_strategy_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In constructor 'ncbi::objects::edit::CSeqIdGuesser::CSeqIdGuesser(ncbi::objects::CSeq_entry_Handle)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:92:48: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] + 92 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); + | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/serialbase.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/general/Dbtag_.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/general/Dbtag.hpp:44, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:31: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here + 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, + | ^~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In static member function 'static std::vector > ncbi::objects::edit::CSeqIdGuesser::GetIdStrings(ncbi::objects::CBioseq_Handle)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:171:44: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] + 171 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); + | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here + 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, + | ^~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp -o subj_ranges_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie subj_ranges_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o subj_ranges_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/subj_ranges_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie version_reference_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o version_reference_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/version_reference_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -ource_item.cpp -o dbsource_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/defline_item.cpp -o defline_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp -o feature_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genome_item.cpp -o genome_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ctrl_items.cpp -o ctrl_items.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/locus_item.cpp -o locus_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-ymake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker/segmasker.cpp -o segmasker.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie segmasker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o segmasker -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/segmasker -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp: In member function 'void ncbi::objects::edit::CPromote::x_PromoteCdregion(ncbi::objects::CSeq_feat&, TRnaMap*) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:224:51: warning: 'static void ncbi::objects::CCdregion_translate::TranslateCdregion(std::string&, const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, bool, bool, bool*, ETranslationLengthProblemOptions)' is deprecated [-Wdeprecated-declarations] + 224 | CCdregion_translate::TranslateCdregion(data, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ + 225 | feat, + | ~~~~~ + 226 | x_Scope(), + | ~~~~~~~~~~ + 227 | include_stop, + | ~~~~~~~~~~~~~ + 228 | remove_trailingX); + | ~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:52: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:966:17: note: declared here + 966 | static void TranslateCdregion(string& prot, + | ^~~~~~~~~~~~~~~~~ +-o apply_object.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/string_constraint.cpp -o string_constraint.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp -o seqid_guesser.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/dblink_field.cpp -o dblink_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/struc_comm_field.cpp -o struc_comm_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_desc_field.cpp -o text_desc_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gb_block_field.cpp -o gb_block_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wnmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie remote_blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o remote_blast_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/remote_blast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o traceback_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/traceback_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp: In function 'const std::string& ncbi::objects::s_AaName(int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp:2135:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] - 2135 | if ( idx > 0 && idx < ArraySize(s_TrnaList) ) { - | ~~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::ConvertRawToDeltaByNs(ncbi::objects::CSeq_inst&, size_t, int, size_t, int, bool, int, int, int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1850:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 1850 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { + | ~~~~~~^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1852:74: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 1852 | } else if (n_len >= min_known && (max_known < 0 || n_len <= max_known)) { + | ~~~~~~^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1875:63: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 1875 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { + | ~~~~~~^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1877:66: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 1877 | } else if (n_len >= min_known && (max_known < 0 || n_len <= max_known)) { + | ~~~~~~^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::UpdateSeqLength(ncbi::CAutoInitRef&, ncbi::objects::CBioseq_Handle&, ncbi::objects::CSeqMap_CI&, ncbi::objects::CSeq_inst_Base::TLength&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqSubMap' not handled in switch [-Wswitch] + 2458 | switch (seqmap_ci.GetType()) { + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqRef' not handled in switch [-Wswitch] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqEnd' not handled in switch [-Wswitch] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqChunk' not handled in switch [-Wswitch] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2458:12: warning: enumeration value 'eSeqLiteral' not handled in switch [-Wswitch] +o-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp -o link_cds_mrna.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp -o cds_fix.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/loc_edit.cpp -o loc_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/mail_report.cpp -o mail_report.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feattable_edit.cpp -o feattable_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gaps_edit.cpp -o gaps_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -s/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'bool ncbi::objects::edit::s_FindSegment(const ncbi::objects::CDense_seg&, ncbi::objects::CDense_seg_Base::TDim, ncbi::TSeqPos, ncbi::objects::CDense_seg_Base::TNumseg&, ncbi::TSeqPos&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2881:21: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] + 2881 | if (pos >= start && pos < start + len) { + | ~~~~^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2881:39: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] + 2881 | if (pos >= start && pos < start + len) { + | ~~~~^~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=convert2blastmask /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie convert2blastmask.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o convert2blastmask @@ -20389,6 +20284,13 @@ /bin/ln -f convert2blastmask /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/convert2blastmask make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker/segmasker.cpp -o segmasker.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie segmasker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o segmasker +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/segmasker +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tracebacksearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o tracebacksearch_unit_test @@ -20396,6 +20298,33 @@ /bin/ln -f tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tracebacksearch_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +pecs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/source_edit.cpp -o source_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp -o rna_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/remote_updater.cpp -o remote_updater.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/eutils_updater.cpp -o eutils_updater.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp -o parse_text_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/publication_edit.cpp -o publication_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fsmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o traceback_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/traceback_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp: In member function 'bool ncbi::objects::edit::CFindITSParser::IsLengthTooLarge(const std::string&, int, int, const std::vector&, const std::vector&, const std::vector&, int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp:259:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 259 | for (int j = i + 1; j < spans.size(); j++) + | ~~^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp: In function 'ncbi::SIZE_TYPE ncbi::objects::edit::FindWithOptions(const std::string&, const std::string&, ncbi::SIZE_TYPE, bool, bool)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp:47:25: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] + 47 | pos = NStr::Find(str, pattern, pos, NPOS, NStr::eFirst, str_case); + | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/edit/parse_text_options.hpp:34, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp:33: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here + 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, + | ^~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie uniform_search_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o uniform_search_unit_test @@ -20403,6 +20332,119 @@ /bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/uniform_search_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp: In function 'bool ncbi::objects::edit::AdjustForCDSPartials(const ncbi::objects::CSeq_feat&, ncbi::objects::CSeq_entry_Handle)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:457:57: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] + 457 | any_change |= AdjustProteinMolInfoToMatchCDS((*it)->SetMolinfo(), cds); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here + 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:463:39: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] + 463 | AdjustProteinMolInfoToMatchCDS(new_molinfo_desc->SetMolinfo(), cds); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here + 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o split_query_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/split_query_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_object_description.cpp:336:15: warning: 'std::string ncbi::objects::edit::GetTextObjectDescription(const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, const std::string&)' defined but not used [-Wunused-function] + 336 | static string GetTextObjectDescription(const CSeq_feat& seq_feat, CScope& scope, const string& product) + | ^~~~~~~~~~~~~~~~~~~~~~~~ +tack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gap_trim.cpp -o gap_trim.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/external_annots.cpp -o external_annots.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feature_propagate.cpp -o feature_propagate.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_object_description.cpp -o text_object_description.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_edit.cpp -o seq_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/pub_fix.cpp -o pub_fix.o +/bin/rm -f libxobjedit.so .libxobjedit.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxobjedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_utils.o seq_entry_edit.o promote.o autodef_with_tax.o field_handler.o apply_object.o string_constraint.o seqid_guesser.o dblink_field.o struc_comm_field.o text_desc_field.o gb_block_field.o link_cds_mrna.o cds_fix.o loc_edit.o mail_report.o feattable_edit.o gaps_edit.o source_edit.o rna_edit.o remote_updater.o eutils_updater.o parse_text_options.o publication_edit.o gap_trim.o external_annots.o feature_propagate.o text_object_description.o seq_edit.o pub_fix.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjutil -ltaxon3 -lvalid -lxlogging -leutils -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxobjedit.so +/bin/ln -f .xobjedit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjedit.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +cd objtools/cleanup/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp -o autogenerated_extended_cleanup.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp -o cleanup.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_utils.cpp -o cleanup_utils.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/gene_qual_normalization.cpp -o gene_qual_normalization.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp -o cleanup_user_object.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_author.cpp -o cleanup_author.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_pub.cpp -o cleanup_pub.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp -o capitalization_string.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/fix_feature_id.cpp -o fix_feature_id.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blas/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp: In static member function 'static bool ncbi::objects::CCleanup::s_AddNumToUserField(ncbi::objects::CUser_field&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:398:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 398 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetStrs().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:404:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 404 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetInts().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:410:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 410 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetReals().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:416:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector*>::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 416 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetOss().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::x_HasShortIntron(const ncbi::objects::CSeq_loc&, size_t)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp:2875:68: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] + 2875 | if (abs((long int)this_start - (long int)prev_end) < min_len) { + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ +t+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_message.cpp -o cleanup_message.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/influenza_set.cpp -o influenza_set.o +/bin/rm -f libxcleanup.so .libxcleanup.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxcleanup.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o gene_qual_normalization.o cleanup_user_object.o cleanup_author.o cleanup_pub.o newcleanupp.o capitalization_string.o fix_feature_id.o cleanup_message.o influenza_set.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxobjutil -lvalid -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre2-8 +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcleanup.so +/bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcleanup.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +cd objtools/format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/accession_item.cpp -o accession_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/basecount_item.cpp -o basecount_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/comment_item.cpp -o comment_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/contig_item.cpp -o contig_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/date_item.cpp -o date_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/dbsource_item.cpp -o dbsource_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/defline_item.cpp -o defline_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp -o feature_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genome_item.cpp -o genome_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ctrl_items.cpp -o ctrl_items.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/locus_item.cpp -o locus_item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp: In function 'const std::string& ncbi::objects::s_AaName(int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp:2135:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] + 2135 | if ( idx > 0 && idx < ArraySize(s_TrnaList) ) { + | ~~~~^~~~~~~~~~~~~~~~~~~~~~~ 2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp -o primary_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/reference_item.cpp -o reference_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/segment_item.cpp -o segment_item.o @@ -20416,24 +20458,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp:301:28: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] 301 | if (this_start < (15 + last_stop) ) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o split_query_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/split_query_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp:346:21: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CBioSource_Base::TGenome' {aka 'int'} and 'const unsigned int' [-Wsign-compare] - 346 | if ( genome >= s_organelle_prefix_size ) { - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/wgs_item.cpp -o wgs_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/tsa_item.cpp -o tsa_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/flat_seqloc.cpp -o flat_seqloc.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/qualifiers.cpp -o qualifiers.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/context.cpp -o context.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp -o gather_items.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-p/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/qualifiers.cpp: In member function 'virtual void ncbi::objects::CFlatSeqIdQVal::Format(ncbi::objects::TFlatQuals&, const ncbi::CTempString&, ncbi::objects::CBioseqContext&, ncbi::objects::IFlatQVal::TFlags) const': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-p/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp:346:21: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CBioSource_Base::TGenome' {aka 'int'} and 'const unsigned int' [-Wsign-compare] + 346 | if ( genome >= s_organelle_prefix_size ) { + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/qualifiers.cpp: In member function 'virtual void ncbi::objects::CFlatSeqIdQVal::Format(ncbi::objects::TFlatQuals&, const ncbi::CTempString&, ncbi::objects::CBioseqContext&, ncbi::objects::IFlatQVal::TFlags) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/qualifiers.cpp:1105:10: warning: unused variable 'bHtml' [-Wunused-variable] 1105 | bool bHtml = ctx.Config().DoHTML(); | ^~~~~ @@ -20454,16 +20489,16 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:969:13: warning: 'bool ncbi::objects::s_NsAreGaps(const CBioseq_Handle&, CBioseqContext&)' defined but not used [-Wunused-function] 969 | static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx) | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genbank_formatter.cpp:285:15: warning: 'std::string ncbi::objects::s_get_anchor_html(const std::string&, ncbi::TGi)' defined but not used [-Wunused-function] + 285 | static string s_get_anchor_html(const string & sAnchorName, TGi iGi ) + | ^~~~~~~~~~~~~~~~~ -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/format_item_ostream.cpp -o format_item_ostream.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/item_ostream.cpp -o item_ostream.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ostream_text_ostream.cpp -o ostream_text_ostream.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/origin_item.cpp -o origin_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ftable_gather.cpp -o ftable_gather.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ftable_formatter.cpp -o ftable_formatter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genbank_formatter.cpp:285:15: warning: 'std::string ncbi::objects::s_get_anchor_html(const std::string&, ncbi::TGi)' defined but not used [-Wunused-function] - 285 | static string s_get_anchor_html(const string & sAnchorName, TGi iGi ) - | ^~~~~~~~~~~~~~~~~ --DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/flat_file_config.cpp -o flat_file_config.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/flat_file_html.cpp -o flat_file_html.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/alignment_item.cpp -o alignment_item.o @@ -20587,131 +20622,131 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j12 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -20723,7 +20758,24 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp -o blastfmtutil_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp -o build_archive_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp -o vecscreen_run_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp: In member function 'void blastinput::RangeInvalid_FromGreaterThanTo::test_method()': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp: In member function 'virtual int CBlastpApp::Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:148:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 148 | if (total_length < max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:159:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 159 | if (total_length > max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp: In member function 'void blastinput::RangeInvalid_FromGreaterThanTo::test_method()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:1977:50: warning: ignoring return value of 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::front() [with _Tp = ncbi::blast::SSeqLoc; _Alloc = std::allocator; reference = ncbi::blast::SSeqLoc&]', declared with attribute 'nodiscard' [-Wunused-result] 1977 | try { source->GetNextSeqLocBatch(scope).front(); } | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ @@ -20749,16 +20801,6 @@ /usr/include/c++/14/bits/stl_vector.h:1211:7: note: declared here 1211 | front() _GLIBCXX_NOEXCEPT | ^~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' @@ -20767,13 +20809,6 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp: In member function 'virtual int CBlastpApp::Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:148:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 148 | if (total_length < max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:159:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 159 | if (total_length > max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp: In member function 'virtual int CBlastnApp::Run()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp:148:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] 148 | if (total_length < max_db_size) { @@ -20809,37 +20844,37 @@ cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie delta_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o delta_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/delta_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o redoalignment_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/redoalignment_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie delta_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o delta_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/delta_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o redoalignment_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/redoalignment_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20860,14 +20895,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_app.cpp:161:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] 161 | if (total_length > max_db_size) { | ~~~~~~~~~~~~~^~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_node.cpp -o blastp_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp -o blastp_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastp_node.o blastp_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastp -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastp -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/blast_format/blast_format_unit_test.cpp -o blast_format_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o blast_format_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blast_format_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_format_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -20879,13 +20912,14 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psiblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_node.cpp -o blastp_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp -o blastp_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastp_node.o blastp_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastp +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastp +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -20898,10 +20932,11 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blast_formatter /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_formatter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blast_formatter -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_formatter /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blast_formatter /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_formatter +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_node.cpp -o blastn_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp -o blastn_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastn_node.o blastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastn +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastn make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20915,14 +20950,13 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_node.cpp -o blastn_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp -o blastn_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastn_node.o blastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastn -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastn -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psiblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -20934,12 +20968,13 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/blast_format/blast_format_unit_test.cpp -o blast_format_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o blast_format_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blast_format_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_format_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blast_formatter /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_formatter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blast_formatter +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_formatter /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blast_formatter /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_formatter +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdb_convert LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -20951,13 +20986,6 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp: In member function 'virtual int CTblastnApp::Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:143:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 143 | if (total_length < max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:154:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 154 | if (total_length > max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_node.cpp -o blastx_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_app.cpp -o blastx_app.o @@ -20977,11 +21005,18 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp: In member function 'virtual int CTblastnApp::Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:143:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 143 | if (total_length < max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:154:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 154 | if (total_length > max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastx_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastx -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastx +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie deltablast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o deltablast +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/deltablast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20996,11 +21031,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_node.cpp -o rpsblast_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rpsblast_node.o rpsblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o rpsblast -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpsblast +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o psiblast +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -21015,11 +21049,11 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_node.cpp -o rpstblastn_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rpstblastn_node.o rpstblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o rpstblastn -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpstblastn +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_node.cpp -o rpsblast_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rpsblast_node.o rpsblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o rpsblast +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpsblast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -21031,36 +21065,37 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o psiblast -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_node.cpp -o rpstblastn_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rpstblastn_node.o rpstblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o rpstblastn +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpstblastn make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie deltablast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o deltablast -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/deltablast -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_convert.cpp -o blastdb_convert.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_convert.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_convert +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_convert +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=makeclusterdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' @@ -21070,10 +21105,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seedtop -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seedtop +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastx_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastx +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastx make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -21088,21 +21123,13 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_node.cpp -o tblastn_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastn_node.o tblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastn -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastn +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seedtop +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seedtop make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_convert.cpp -o blastdb_convert.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_convert.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_convert -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_convert -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_aliastool.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_aliastool /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -21123,10 +21150,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcmd.cpp:1213:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1213 | CRef m = m_BlastDb->GetDBMetaData(output_prefix); | ^~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp: In member function 'void CMakeClusterDBApp::x_BuildDatabase()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp:565:10: warning: unused variable 'success' [-Wunused-variable] - 565 | bool success = m_DB->EndBuild(); - | ^~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_node.cpp -o tblastn_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastn_node.o tblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastn +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastn +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp: In member function 'void CMakeProfileDBApp::x_InitRPSDbInfo(CRPS_DbInfo&, Int4, Int4)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp:768:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 768 | if (!rpsDbInfo.aux_file.is_open()) @@ -21134,6 +21165,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp:771:10: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 771 | string freq_str = rpsDbInfo.db_name + ".freq"; | ^~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp: In member function 'void CMakeClusterDBApp::x_BuildDatabase()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp:565:10: warning: unused variable 'success' [-Wunused-variable] + 565 | bool success = m_DB->EndBuild(); + | ^~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp: In member function 'int CMakeProfileDBApp::x_Run()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp:1392:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1392 | if (m_NumOfVols == m_VolNames.size()) { @@ -21160,6 +21195,21 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeblastdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeblastdb.cpp -o makeblastdb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeblastdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/masked_range_set.cpp -o masked_range_set.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie makeblastdb.o masked_range_set.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makeblastdb +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeblastdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f makeblastdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeblastdb +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp -o makeprofiledb.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie makeprofiledb.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makeprofiledb +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeprofiledb +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp -o makeclusterdb.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie makeclusterdb.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makeclusterdb /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -21173,21 +21223,6 @@ /bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/bl2seq_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp -o makeprofiledb.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie makeprofiledb.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makeprofiledb -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeprofiledb -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeblastdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeblastdb.cpp -o makeblastdb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeblastdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/masked_range_set.cpp -o masked_range_set.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie makeblastdb.o masked_range_set.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makeblastdb -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeblastdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f makeblastdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeblastdb -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o @@ -23006,8 +23041,8 @@ Testing, please wait... -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/check.sh: 331: ulimit: error setting limit (Operation not permitted) -OK -- [serial/datatool] datatool.sh (real 0.51, user 0.35, sys 0.16) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/check.sh: line 331: ulimit: core file size: cannot modify limit: Operation not permitted +OK -- [serial/datatool] datatool.sh (real 2.73, user 0.31, sys 0.06) SKP -- [serial/datatool] datatool_xml.sh ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM_BY_SEQ @@ -23026,17 +23061,17 @@ DIS -- [objtools/blast/seqdb_reader/test] get_blastdb_metadata DIS -- [objtools/blast/seqdb_writer/unit_test] writedb_unit_test DIS -- [objtools/blast/seqdb_writer/unit_test] writedb_lmdb_unit_test -OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.04, user 0.02, sys 0.02) +OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.27, user 0.03, sys 0.00) DIS -- [objtools/blast/blastdb_format/unit_test] blastdb_format_unit_test ABS -- [objtools/pubseq_gateway/client/test] test_psg_client_impl DIS -- [objtools/align_format/unit_test] align_format_unit_test -OK -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 4.15, user 3.34, sys 0.82) +OK -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 8.94, user 3.55, sys 0.74) DIS -- [algo/blast/blastinput/unit_test] blastinput_unit_test DIS -- [algo/blast/unit_tests/blast_format] blast_format_unit_test DIS -- [algo/blast/unit_tests/blastdb] bdbloader_unit_test DIS -- [algo/blast/unit_tests/seqdb_reader] seqdb_unit_test DIS -- [algo/blast/unit_tests/seqdb_reader] seqdb_lmdb_unit_test -OK -- [algo/blast/unit_tests/seqdb_reader] seqdb_tax4blast_unit_test (real 0.07, user 0.05, sys 0.02) +OK -- [algo/blast/unit_tests/seqdb_reader] seqdb_tax4blast_unit_test (real 0.27, user 0.04, sys 0.01) DIS -- [algo/blast/unit_tests/api] blast_unit_test DIS -- [algo/blast/unit_tests/api] aalookup_unit_test DIS -- [algo/blast/unit_tests/api] seqsrc_unit_test @@ -23051,7 +23086,7 @@ DIS -- [algo/blast/unit_tests/api] pssmenginefreqratios_unit_test DIS -- [algo/blast/unit_tests/api] blastsetup_unit_test DIS -- [algo/blast/unit_tests/api] blastextend_unit_test -OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.07, user 0.05, sys 0.02) +OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.25, user 0.04, sys 0.00) DIS -- [algo/blast/unit_tests/api] pssmcreate_unit_test DIS -- [algo/blast/unit_tests/api] psiblast_iteration_unit_test DIS -- [algo/blast/unit_tests/api] hspfilter_besthit_unit_test @@ -23075,7 +23110,7 @@ DIS -- [algo/blast/unit_tests/api] subj_ranges_unit_test DIS -- [algo/blast/unit_tests/api] version_reference_unit_test DIS -- [algo/blast/unit_tests/api] ntscan_unit_test -TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 201.09, user 0.18, sys 0.03) +TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 201.45, user 0.20, sys 0.00) DIS -- [algo/blast/unit_tests/api] remote_blast_unit_test DIS -- [algo/blast/unit_tests/api] uniform_search_unit_test DIS -- [algo/blast/unit_tests/api] blastfilter_unit_test @@ -23100,127 +23135,127 @@ make[2]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++' c++/BUILD/build/check.sh concat_err cat c++/BUILD/build/check.sh.out_err -TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 201.09, user 0.18, sys 0.03) +TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 201.45, user 0.20, sys 0.00) ====================================================================== aascan_unit_test ====================================================================== -1338374/000/0000/PB 61976C06937FCF01 0001/0001 2025-12-09T10:41:52.522858 codethink03-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test start /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test -1338374/000/0000/PB 61976C06937FCF01 0002/0002 2025-12-09T10:41:52.523132 codethink03-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_app_username=pbuilder1&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.16.0%2Bds/c%2B%2B/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test&ncbi_app_build_date=Aug++7+2024+01:45:09&ncbi_app_package_name=blast&ncbi_app_package_version=2.16.0&ncbi_app_package_date=Aug++7+2024+01:45:09&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 +145567/000/0000/PB AF28389F72AF8FF1 0001/0001 2024-11-06T05:05:03.561774 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test start /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test +145567/000/0000/PB AF28389F72AF8FF1 0002/0002 2024-11-06T05:05:03.561981 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_app_username=pbuilder2&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.16.0%2Bds/c%2B%2B/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test&ncbi_app_build_date=Aug++7+2024+01:45:09&ncbi_app_package_name=blast&ncbi_app_package_version=2.16.0&ncbi_app_package_date=Aug++7+2024+01:45:09&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 Running 7 test cases... -1338374/000/0001/RB 61976C06937FCF01 0003/0003 2025-12-09T10:41:52.525570 codethink03-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanOffsetTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 -1338374/000/0001/R 61976C06937FCF01 0004/0004 2025-12-09T10:41:52.528231 codethink03-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=61976C06937FCF010000000000010001 -1338374/000/0001/R 61976C06937FCF01 0005/0005 2025-12-09T10:41:52.528278 codethink03-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 -1338374/000/0001/R 61976C06937FCF01 0006/0006 2025-12-09T10:41:52.529258 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=2 -1338374/000/0001/R 61976C06937FCF01 0007/0007 2025-12-09T10:41:52.529432 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#1000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0001/R 61976C06937FCF01 0008/0008 2025-12-09T10:41:52.529463 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0001/R 61976C06937FCF01 0009/0009 2025-12-09T10:41:52.529480 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0001/R 61976C06937FCF01 0010/0010 2025-12-09T10:41:52.529495 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0001/R 61976C06937FCF01 0011/0011 2025-12-09T10:41:52.529509 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0001/R 61976C06937FCF01 0012/0012 2025-12-09T10:41:52.530040 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=3 -1338374/000/0001/R 61976C06937FCF01 0013/0013 2025-12-09T10:41:52.530364 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=4 -1338374/000/0001/R 61976C06937FCF01 0014/0014 2025-12-09T10:41:52.530701 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#2000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0001/R 61976C06937FCF01 0015/0015 2025-12-09T10:41:52.530724 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0001/R 61976C06937FCF01 0016/0016 2025-12-09T10:41:52.530750 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0001/R 61976C06937FCF01 0017/0017 2025-12-09T10:41:52.530766 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0001/R 61976C06937FCF01 0018/0018 2025-12-09T10:41:52.530779 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0001/R 61976C06937FCF01 0019/0019 2025-12-09T10:41:52.530903 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=5 -1338374/000/0001/R 61976C06937FCF01 0020/0020 2025-12-09T10:41:53.531722 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=6 -1338374/000/0001/R 61976C06937FCF01 0021/0021 2025-12-09T10:41:53.531976 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#3000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0001/R 61976C06937FCF01 0022/0022 2025-12-09T10:41:53.532011 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0001/R 61976C06937FCF01 0023/0023 2025-12-09T10:41:53.532039 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0001/R 61976C06937FCF01 0024/0024 2025-12-09T10:41:53.532064 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0001/R 61976C06937FCF01 0025/0025 2025-12-09T10:41:53.532087 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0001/R 61976C06937FCF01 0026/0026 2025-12-09T10:41:53.532320 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=7 -1338374/000/0001/R 61976C06937FCF01 0027/0027 2025-12-09T10:41:56.033290 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=8 -1338374/000/0001/R 61976C06937FCF01 0028/0028 2025-12-09T10:41:56.033538 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#4000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0001/R 61976C06937FCF01 0029/0029 2025-12-09T10:41:56.033573 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0001/R 61976C06937FCF01 0030/0030 2025-12-09T10:41:56.033609 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0001/R 61976C06937FCF01 0031/0031 2025-12-09T10:41:56.033637 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0001/R 61976C06937FCF01 0032/0032 2025-12-09T10:41:56.033659 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0001/R 61976C06937FCF01 0033/0033 2025-12-09T10:41:56.033888 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=9 -1338374/000/0001/R 61976C06937FCF01 0034/0034 2025-12-09T10:42:00.787541 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=10 -1338374/000/0001/R 61976C06937FCF01 0035/0035 2025-12-09T10:42:00.787691 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#5000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0001/R 61976C06937FCF01 0036/0036 2025-12-09T10:42:00.787707 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0001/R 61976C06937FCF01 0037/0037 2025-12-09T10:42:00.787718 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0001/R 61976C06937FCF01 0038/0038 2025-12-09T10:42:00.787728 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0001/R 61976C06937FCF01 0039/0039 2025-12-09T10:42:00.787738 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0001/R 61976C06937FCF01 0040/0040 2025-12-09T10:42:00.788133 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=11 -1338374/000/0001/R 61976C06937FCF01 0041/0041 2025-12-09T10:42:08.915531 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=12 -1338374/000/0001/R 61976C06937FCF01 0042/0042 2025-12-09T10:42:08.915698 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#6000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0001/R 61976C06937FCF01 0043/0043 2025-12-09T10:42:08.915715 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0001/R 61976C06937FCF01 0044/0044 2025-12-09T10:42:08.915733 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0001/R 61976C06937FCF01 0045/0045 2025-12-09T10:42:08.915745 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0001/R 61976C06937FCF01 0046/0046 2025-12-09T10:42:08.915756 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0001/R 61976C06937FCF01 0047/0047 2025-12-09T10:42:08.915890 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=13 -1338374/000/0001/R 61976C06937FCF01 0048/0048 2025-12-09T10:42:22.107536 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=14 -1338374/000/0001/R 61976C06937FCF01 0049/0049 2025-12-09T10:42:22.107691 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#7000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0001/R 61976C06937FCF01 0050/0050 2025-12-09T10:42:22.107707 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0001/R 61976C06937FCF01 0051/0051 2025-12-09T10:42:22.107719 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0001/R 61976C06937FCF01 0052/0052 2025-12-09T10:42:22.107728 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0001/R 61976C06937FCF01 0053/0053 2025-12-09T10:42:22.107739 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0001/R 61976C06937FCF01 0054/0054 2025-12-09T10:42:22.107874 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=15 -1338374/000/0001/R 61976C06937FCF01 0055/0055 2025-12-09T10:42:42.891538 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=16 -1338374/000/0001/R 61976C06937FCF01 0056/0056 2025-12-09T10:42:42.891695 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#8000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0001/R 61976C06937FCF01 0057/0057 2025-12-09T10:42:42.891712 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0001/R 61976C06937FCF01 0058/0058 2025-12-09T10:42:42.891730 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0001/R 61976C06937FCF01 0059/0059 2025-12-09T10:42:42.891741 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0001/R 61976C06937FCF01 0060/0060 2025-12-09T10:42:42.891752 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0001/R 61976C06937FCF01 0061/0061 2025-12-09T10:42:42.891887 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=17 -1338374/000/0001/R 61976C06937FCF01 0062/0062 2025-12-09T10:43:12.895553 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=18 -1338374/000/0001/R 61976C06937FCF01 0063/0063 2025-12-09T10:43:12.895707 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#9000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0001/R 61976C06937FCF01 0064/0064 2025-12-09T10:43:12.895723 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0001/R 61976C06937FCF01 0065/0065 2025-12-09T10:43:12.895734 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0001/R 61976C06937FCF01 0066/0066 2025-12-09T10:43:12.895744 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0001/R 61976C06937FCF01 0067/0067 2025-12-09T10:43:12.895754 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0001/R 61976C06937FCF01 0068/0068 2025-12-09T10:43:12.895896 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=19 -1338374/000/0001/R 61976C06937FCF01 0069/0069 2025-12-09T10:43:42.899543 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test extra issued_subhit=20 -1338374/000/0001/R 61976C06937FCF01 0070/0070 2025-12-09T10:43:42.899710 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#10000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0001/R 61976C06937FCF01 0071/0071 2025-12-09T10:43:42.899726 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0001/R 61976C06937FCF01 0072/0072 2025-12-09T10:43:42.899744 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0001/R 61976C06937FCF01 0073/0073 2025-12-09T10:43:42.899756 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0001/R 61976C06937FCF01 0074/0074 2025-12-09T10:43:42.899767 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0001/RE 61976C06937FCF01 0075/0075 2025-12-09T10:43:42.900761 codethink03-arm64 UNK_CLIENT 61976C06937FCF01_0001SID aascan_unit_test request-stop 500 110.375206947 0 0 +145567/000/0001/RB AF28389F72AF8FF1 0003/0003 2024-11-06T05:05:03.571840 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanOffsetTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 +145567/000/0001/R AF28389F72AF8FF1 0004/0004 2024-11-06T05:05:03.578291 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=AF28389F72AF8FF10000000000010001 +145567/000/0001/R AF28389F72AF8FF1 0005/0005 2024-11-06T05:05:03.582286 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 +145567/000/0001/R AF28389F72AF8FF1 0006/0006 2024-11-06T05:05:03.586526 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=2 +145567/000/0001/R AF28389F72AF8FF1 0007/0007 2024-11-06T05:05:03.594299 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#1000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0001/R AF28389F72AF8FF1 0008/0008 2024-11-06T05:05:03.594356 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0001/R AF28389F72AF8FF1 0009/0009 2024-11-06T05:05:03.594372 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0001/R AF28389F72AF8FF1 0010/0010 2024-11-06T05:05:03.594385 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0001/R AF28389F72AF8FF1 0011/0011 2024-11-06T05:05:03.594397 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0001/R AF28389F72AF8FF1 0012/0012 2024-11-06T05:05:03.594919 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=3 +145567/000/0001/R AF28389F72AF8FF1 0013/0013 2024-11-06T05:05:03.595194 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=4 +145567/000/0001/R AF28389F72AF8FF1 0014/0014 2024-11-06T05:05:03.595356 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#2000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0001/R AF28389F72AF8FF1 0015/0015 2024-11-06T05:05:03.595371 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0001/R AF28389F72AF8FF1 0016/0016 2024-11-06T05:05:03.595390 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0001/R AF28389F72AF8FF1 0017/0017 2024-11-06T05:05:03.595401 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0001/R AF28389F72AF8FF1 0018/0018 2024-11-06T05:05:03.595409 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0001/R AF28389F72AF8FF1 0019/0019 2024-11-06T05:05:03.595497 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=5 +145567/000/0001/R AF28389F72AF8FF1 0020/0020 2024-11-06T05:05:04.598536 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=6 +145567/000/0001/R AF28389F72AF8FF1 0021/0021 2024-11-06T05:05:04.598706 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#3000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0001/R AF28389F72AF8FF1 0022/0022 2024-11-06T05:05:04.598723 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0001/R AF28389F72AF8FF1 0023/0023 2024-11-06T05:05:04.598734 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0001/R AF28389F72AF8FF1 0024/0024 2024-11-06T05:05:04.598745 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0001/R AF28389F72AF8FF1 0025/0025 2024-11-06T05:05:04.598755 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0001/R AF28389F72AF8FF1 0026/0026 2024-11-06T05:05:04.598880 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=7 +145567/000/0001/R AF28389F72AF8FF1 0027/0027 2024-11-06T05:05:07.102530 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=8 +145567/000/0001/R AF28389F72AF8FF1 0028/0028 2024-11-06T05:05:07.102704 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#4000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0001/R AF28389F72AF8FF1 0029/0029 2024-11-06T05:05:07.102720 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0001/R AF28389F72AF8FF1 0030/0030 2024-11-06T05:05:07.102741 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0001/R AF28389F72AF8FF1 0031/0031 2024-11-06T05:05:07.102754 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0001/R AF28389F72AF8FF1 0032/0032 2024-11-06T05:05:07.102764 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0001/R AF28389F72AF8FF1 0033/0033 2024-11-06T05:05:07.102899 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=9 +145567/000/0001/R AF28389F72AF8FF1 0034/0034 2024-11-06T05:05:11.854542 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=10 +145567/000/0001/R AF28389F72AF8FF1 0035/0035 2024-11-06T05:05:11.854730 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#5000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0001/R AF28389F72AF8FF1 0036/0036 2024-11-06T05:05:11.854747 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0001/R AF28389F72AF8FF1 0037/0037 2024-11-06T05:05:11.854759 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0001/R AF28389F72AF8FF1 0038/0038 2024-11-06T05:05:11.854769 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0001/R AF28389F72AF8FF1 0039/0039 2024-11-06T05:05:11.854781 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0001/R AF28389F72AF8FF1 0040/0040 2024-11-06T05:05:11.855187 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=11 +145567/000/0001/R AF28389F72AF8FF1 0041/0041 2024-11-06T05:05:19.982537 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=12 +145567/000/0001/R AF28389F72AF8FF1 0042/0042 2024-11-06T05:05:19.982718 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#6000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0001/R AF28389F72AF8FF1 0043/0043 2024-11-06T05:05:19.982734 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0001/R AF28389F72AF8FF1 0044/0044 2024-11-06T05:05:19.982753 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0001/R AF28389F72AF8FF1 0045/0045 2024-11-06T05:05:19.982766 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0001/R AF28389F72AF8FF1 0046/0046 2024-11-06T05:05:19.982776 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0001/R AF28389F72AF8FF1 0047/0047 2024-11-06T05:05:19.982920 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=13 +145567/000/0001/R AF28389F72AF8FF1 0048/0048 2024-11-06T05:05:33.171210 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=14 +145567/000/0001/R AF28389F72AF8FF1 0049/0049 2024-11-06T05:05:33.171388 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#7000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0001/R AF28389F72AF8FF1 0050/0050 2024-11-06T05:05:33.171406 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0001/R AF28389F72AF8FF1 0051/0051 2024-11-06T05:05:33.171418 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0001/R AF28389F72AF8FF1 0052/0052 2024-11-06T05:05:33.171429 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0001/R AF28389F72AF8FF1 0053/0053 2024-11-06T05:05:33.171440 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0001/R AF28389F72AF8FF1 0054/0054 2024-11-06T05:05:33.171582 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=15 +145567/000/0001/R AF28389F72AF8FF1 0055/0055 2024-11-06T05:05:53.954529 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=16 +145567/000/0001/R AF28389F72AF8FF1 0056/0056 2024-11-06T05:05:53.954704 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#8000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0001/R AF28389F72AF8FF1 0057/0057 2024-11-06T05:05:53.954728 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0001/R AF28389F72AF8FF1 0058/0058 2024-11-06T05:05:53.954742 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0001/R AF28389F72AF8FF1 0059/0059 2024-11-06T05:05:53.954751 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0001/R AF28389F72AF8FF1 0060/0060 2024-11-06T05:05:53.954761 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0001/R AF28389F72AF8FF1 0061/0061 2024-11-06T05:05:53.954909 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=17 +145567/000/0001/R AF28389F72AF8FF1 0062/0062 2024-11-06T05:06:23.958530 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=18 +145567/000/0001/R AF28389F72AF8FF1 0063/0063 2024-11-06T05:06:23.958718 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#9000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0001/R AF28389F72AF8FF1 0064/0064 2024-11-06T05:06:23.958736 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0001/R AF28389F72AF8FF1 0065/0065 2024-11-06T05:06:23.958747 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0001/R AF28389F72AF8FF1 0066/0066 2024-11-06T05:06:23.958758 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0001/R AF28389F72AF8FF1 0067/0067 2024-11-06T05:06:23.958768 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0001/R AF28389F72AF8FF1 0068/0068 2024-11-06T05:06:23.958908 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=19 +145567/000/0001/R AF28389F72AF8FF1 0069/0069 2024-11-06T05:06:53.962528 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test extra issued_subhit=20 +145567/000/0001/R AF28389F72AF8FF1 0070/0070 2024-11-06T05:06:53.962704 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#10000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0001/R AF28389F72AF8FF1 0071/0071 2024-11-06T05:06:53.962731 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0001/R AF28389F72AF8FF1 0072/0072 2024-11-06T05:06:53.962745 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0001/R AF28389F72AF8FF1 0073/0073 2024-11-06T05:06:53.962755 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0001/R AF28389F72AF8FF1 0074/0074 2024-11-06T05:06:53.962766 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0001/RE AF28389F72AF8FF1 0075/0075 2024-11-06T05:06:53.963775 i-capture-the-hostname UNK_CLIENT AF28389F72AF8FF1_0001SID aascan_unit_test request-stop 500 110.391945123 0 0 unknown location(0): fatal error: in "aascan/ScanOffsetTest": ncbi::objects::CLoaderException: NCBI C++ Exception: Error: ID2(CLoaderException::eConnectionFailed) "./c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 253: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 Error: GENBANK(CLoaderException::eConnectionFailed) "./c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp", line 1926: ncbi::objects::CId2ReaderBase::x_SendID2Packet() --- failed to send request: NULL (in GetRecords(gi|18652417)) ./c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp(251): last checkpoint: "ScanOffsetTest" fixture entry. -1338374/000/0002/RB 61976C06937FCF01 0078/0078 2025-12-09T10:43:42.901233 codethink03-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanMaxHitsTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 -1338374/000/0002/R 61976C06937FCF01 0079/0079 2025-12-09T10:43:42.901325 codethink03-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=61976C06937FCF010000000000020002 -1338374/000/0002/R 61976C06937FCF01 0080/0080 2025-12-09T10:43:42.901338 codethink03-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 -1338374/000/0002/R 61976C06937FCF01 0081/0081 2025-12-09T10:44:12.903562 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test extra issued_subhit=2 -1338374/000/0002/R 61976C06937FCF01 0082/0082 2025-12-09T10:44:12.903726 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#11000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0002/R 61976C06937FCF01 0083/0083 2025-12-09T10:44:12.903742 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0002/R 61976C06937FCF01 0084/0084 2025-12-09T10:44:12.903754 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0002/R 61976C06937FCF01 0085/0085 2025-12-09T10:44:12.903765 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0002/R 61976C06937FCF01 0086/0086 2025-12-09T10:44:12.903775 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0002/R 61976C06937FCF01 0087/0087 2025-12-09T10:44:12.903906 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test extra issued_subhit=3 -1338374/000/0002/R 61976C06937FCF01 0088/0088 2025-12-09T10:44:42.907560 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test extra issued_subhit=4 -1338374/000/0002/R 61976C06937FCF01 0089/0089 2025-12-09T10:44:42.907718 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#12000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0002/R 61976C06937FCF01 0090/0090 2025-12-09T10:44:42.907735 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0002/R 61976C06937FCF01 0091/0091 2025-12-09T10:44:42.907747 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0002/R 61976C06937FCF01 0092/0092 2025-12-09T10:44:42.907757 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0002/R 61976C06937FCF01 0093/0093 2025-12-09T10:44:42.907768 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0002/R 61976C06937FCF01 0094/0094 2025-12-09T10:44:42.907892 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test extra issued_subhit=5 -1338374/000/0002/R 61976C06937FCF01 0095/0095 2025-12-09T10:45:12.911572 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test extra issued_subhit=6 -1338374/000/0002/R 61976C06937FCF01 0096/0096 2025-12-09T10:45:12.911734 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#13000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -1338374/000/0002/R 61976C06937FCF01 0097/0097 2025-12-09T10:45:12.911751 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -1338374/000/0002/R 61976C06937FCF01 0098/0098 2025-12-09T10:45:12.911765 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink03-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -1338374/000/0002/R 61976C06937FCF01 0099/0099 2025-12-09T10:45:12.911776 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -1338374/000/0002/R 61976C06937FCF01 0100/0100 2025-12-09T10:45:12.911790 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -1338374/000/0002/R 61976C06937FCF01 0101/0101 2025-12-09T10:45:12.911945 codethink03-arm64 UNK_CLIENT 61976C06937FD7C1_0002SID aascan_unit_test extra issued_subhit=7 +145567/000/0002/RB AF28389F72AF8FF1 0078/0078 2024-11-06T05:06:53.964243 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanMaxHitsTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 +145567/000/0002/R AF28389F72AF8FF1 0079/0079 2024-11-06T05:06:53.964330 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=AF28389F72AF8FF10000000000020002 +145567/000/0002/R AF28389F72AF8FF1 0080/0080 2024-11-06T05:06:53.964342 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 +145567/000/0002/R AF28389F72AF8FF1 0081/0081 2024-11-06T05:07:23.966520 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test extra issued_subhit=2 +145567/000/0002/R AF28389F72AF8FF1 0082/0082 2024-11-06T05:07:23.966686 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#11000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0002/R AF28389F72AF8FF1 0083/0083 2024-11-06T05:07:23.966703 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0002/R AF28389F72AF8FF1 0084/0084 2024-11-06T05:07:23.966714 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0002/R AF28389F72AF8FF1 0085/0085 2024-11-06T05:07:23.966732 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0002/R AF28389F72AF8FF1 0086/0086 2024-11-06T05:07:23.966745 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0002/R AF28389F72AF8FF1 0087/0087 2024-11-06T05:07:23.966866 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test extra issued_subhit=3 +145567/000/0002/R AF28389F72AF8FF1 0088/0088 2024-11-06T05:07:53.967291 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test extra issued_subhit=4 +145567/000/0002/R AF28389F72AF8FF1 0089/0089 2024-11-06T05:07:53.967459 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#12000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0002/R AF28389F72AF8FF1 0090/0090 2024-11-06T05:07:53.967475 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0002/R AF28389F72AF8FF1 0091/0091 2024-11-06T05:07:53.967487 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0002/R AF28389F72AF8FF1 0092/0092 2024-11-06T05:07:53.967497 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0002/R AF28389F72AF8FF1 0093/0093 2024-11-06T05:07:53.967507 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0002/R AF28389F72AF8FF1 0094/0094 2024-11-06T05:07:53.967635 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test extra issued_subhit=5 +145567/000/0002/R AF28389F72AF8FF1 0095/0095 2024-11-06T05:08:23.970513 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test extra issued_subhit=6 +145567/000/0002/R AF28389F72AF8FF1 0096/0096 2024-11-06T05:08:23.970684 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#13000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +145567/000/0002/R AF28389F72AF8FF1 0097/0097 2024-11-06T05:08:23.970701 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +145567/000/0002/R AF28389F72AF8FF1 0098/0098 2024-11-06T05:08:23.970713 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +145567/000/0002/R AF28389F72AF8FF1 0099/0099 2024-11-06T05:08:23.970732 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +145567/000/0002/R AF28389F72AF8FF1 0100/0100 2024-11-06T05:08:23.970745 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +145567/000/0002/R AF28389F72AF8FF1 0101/0101 2024-11-06T05:08:23.970869 i-capture-the-hostname UNK_CLIENT AF28389F72AF98B1_0002SID aascan_unit_test extra issued_subhit=7 Maximum execution time of 200 second(s) is exceeded -real 201.09 -user 0.18 -sys 0.03 -Start time : 12/09/2025 10:41:52 -Stop time : 12/09/2025 10:45:13 -Load averages: 15.35 18.47 17.90 +real 201.45 +user 0.20 +sys 0.00 +Start time : 11/06/2024 05:05:03 +Stop time : 11/06/2024 05:08:24 +Load averages: 15.59 22.31 26.25 @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@@ EXIT CODE: 143 @@ -23396,9 +23431,9 @@ dh_gencontrol -O--sourcedirectory=c\+\+ -O--with-autoreconf dh_md5sums -O--sourcedirectory=c\+\+ -O--with-autoreconf dh_builddeb -O--sourcedirectory=c\+\+ -O--with-autoreconf -dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.16.0+ds-6_arm64.deb'. dpkg-deb: building package 'ncbi-blast+-legacy' in '../ncbi-blast+-legacy_2.16.0+ds-6_all.deb'. dpkg-deb: building package 'ncbi-blast+-dbgsym' in '../ncbi-blast+-dbgsym_2.16.0+ds-6_arm64.deb'. +dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.16.0+ds-6_arm64.deb'. dpkg-genbuildinfo --build=binary -O../ncbi-blast+_2.16.0+ds-6_arm64.buildinfo dpkg-genchanges --build=binary -O../ncbi-blast+_2.16.0+ds-6_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -23407,12 +23442,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3845928/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3845928/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1173027 and its subdirectories -I: Current time: Mon Dec 8 22:48:27 -12 2025 -I: pbuilder-time-stamp: 1765277307 +I: removing directory /srv/workspace/pbuilder/3845928 and its subdirectories +I: Current time: Wed Nov 6 19:12:31 +14 2024 +I: pbuilder-time-stamp: 1730869951