Diff of the two buildlogs: -- --- b1/build.log 2024-04-27 20:16:14.138378945 +0000 +++ b2/build.log 2024-04-27 20:18:53.655564665 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri May 30 14:35:15 -12 2025 -I: pbuilder-time-stamp: 1748658915 +I: Current time: Sun Apr 28 10:16:29 +14 2024 +I: pbuilder-time-stamp: 1714248989 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -29,52 +29,84 @@ dpkg-source: info: applying cstdint.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2932693/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1364002/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 27 20:16 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1364002/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1364002/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='2d0c72e48581477e8321e899bdace4dd' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2932693' - PS1='# ' - PS2='> ' + INVOCATION_ID=2e39f14007a74533807036e9250ae21d + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1364002 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IXAWETpV/pbuilderrc_L5hH --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IXAWETpV/b1 --logfile b1/build.log metaeuk_6-a5d39d9+ds-5.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IXAWETpV/pbuilderrc_YQKB --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IXAWETpV/b2 --logfile b2/build.log metaeuk_6-a5d39d9+ds-5.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.1.0-20-cloud-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-20-cloud-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 24 13:38 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2932693/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Apr 23 11:23 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1364002/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -223,7 +255,7 @@ Get: 55 http://deb.debian.org/debian trixie/main arm64 libsimde-dev all 0.8.0-1 [458 kB] Get: 56 http://deb.debian.org/debian trixie/main arm64 libxxhash-dev arm64 0.8.2-2+b1 [81.3 kB] Get: 57 http://deb.debian.org/debian trixie/main arm64 libzstd-dev arm64 1.5.5+dfsg2-2 [323 kB] -Fetched 36.2 MB in 0s (85.8 MB/s) +Fetched 36.2 MB in 0s (155 MB/s) debconf: delaying package configuration, since apt-utils is not installed dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). @@ -473,7 +505,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../metaeuk_6-a5d39d9+ds-5_source.changes +I: user script /srv/workspace/pbuilder/1364002/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/1364002/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../metaeuk_6-a5d39d9+ds-5_source.changes dpkg-buildpackage: info: source package metaeuk dpkg-buildpackage: info: source version 6-a5d39d9+ds-5 dpkg-buildpackage: info: source distribution unstable @@ -563,7 +599,7 @@ -- Found OpenMP -- xxd not found, using xxdi.pl instead -- ShellCheck not found --- Configuring done (6.0s) +-- Configuring done (3.9s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: @@ -587,129 +623,144 @@ make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' make -f lib/mmseqs/lib/microtar/CMakeFiles/microtar.dir/build.make lib/mmseqs/lib/microtar/CMakeFiles/microtar.dir/depend +make -f lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/build.make lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/depend +make -f lib/mmseqs/lib/alp/CMakeFiles/alp.dir/build.make lib/mmseqs/lib/alp/CMakeFiles/alp.dir/depend +make -f lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/build.make lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/depend +make -f lib/mmseqs/data/CMakeFiles/generated.dir/build.make lib/mmseqs/data/CMakeFiles/generated.dir/depend make[3]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-6-a5d39d9+ds /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar/CMakeFiles/microtar.dir/DependInfo.cmake "--color=" -make -f lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/build.make lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/depend +make -f lib/mmseqs/lib/tinyexpr/CMakeFiles/tinyexpr.dir/build.make lib/mmseqs/lib/tinyexpr/CMakeFiles/tinyexpr.dir/depend +make -f data/CMakeFiles/local-generated.dir/build.make 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/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp -make -f data/CMakeFiles/local-generated.dir/build.make data/CMakeFiles/local-generated.dir/depend -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h make[3]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-6-a5d39d9+ds /build/reproducible-path/metaeuk-6-a5d39d9+ds/data /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu 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-I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -MD -MT lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o -MF CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o.d -o CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2/ksw2_extz2_sse.cpp +make -f src/version/CMakeFiles/version.dir/build.make src/version/CMakeFiles/version.dir/build +[ 1%] Generating ../generated/VTML80.out.h +[ 1%] Building C object lib/mmseqs/lib/tinyexpr/CMakeFiles/tinyexpr.dir/tinyexpr.c.o +[ 1%] Generating ../generated/VTML40.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cc -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -MD -MT lib/mmseqs/lib/microtar/CMakeFiles/microtar.dir/microtar.c.o -MF CMakeFiles/microtar.dir/microtar.c.o.d -o CMakeFiles/microtar.dir/microtar.c.o -c 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VTML80.out +[ 1%] Generating ../generated/nucleotide.out.h +[ 1%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/lambda_calculator.cpp.o +make[3]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/cacode && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/lambda_calculator.cpp.o -MF CMakeFiles/cacode.dir/lambda_calculator.cpp.o.d -o CMakeFiles/cacode.dir/lambda_calculator.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode/lambda_calculator.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true VTML40.out -[ 4%] Generating ../generated/predictexons.sh.h +[ 1%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprob.cpp.o +[ 1%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/lubksb.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprob.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogprob.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogprob.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_dynprogprob.cpp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/cacode && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/lubksb.cpp.o -MF CMakeFiles/cacode.dir/lubksb.cpp.o.d -o CMakeFiles/cacode.dir/lubksb.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode/lubksb.cpp +[ 1%] Generating ../generated/blosum62.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide.out +[ 2%] Generating ../generated/predictexons.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true predictexons.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blosum62.out +[ 2%] Building CXX object src/version/CMakeFiles/version.dir/Version.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 5%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_localmaxstatmatrix.cpp -[ 6%] Linking C static library libmicrotar.a -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl VTML40.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -P CMakeFiles/microtar.dir/cmake_clean_target.cmake +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/c++ -DGIT_SHA1=6-a5d39d9+ds-5 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/src/commons -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT src/version/CMakeFiles/version.dir/Version.cpp.o -MF CMakeFiles/version.dir/Version.cpp.o.d -o CMakeFiles/version.dir/Version.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/version/Version.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -[ 6%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -MF CMakeFiles/alp.dir/sls_alp_sim.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_sim.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp_sim.cpp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl predictexons.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -E cmake_link_script CMakeFiles/microtar.dir/link.txt --verbose=1 +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl VTML80.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl VTML40.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl nucleotide.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blosum62.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h +[ 3%] Linking CXX static library libversion.a +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -P CMakeFiles/version.dir/cmake_clean_target.cmake cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h -/usr/bin/ar qc libmicrotar.a CMakeFiles/microtar.dir/microtar.c.o -/usr/bin/ranlib libmicrotar.a -[ 6%] Generating ../generated/nucleotide.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide.out -make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -[ 6%] Generating ../generated/easypredict.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 6%] Built target microtar -[ 6%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -E cmake_link_script CMakeFiles/version.dir/link.txt --verbose=1 +[ 4%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/ludcmp.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/cacode && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/ludcmp.cpp.o -MF CMakeFiles/cacode.dir/ludcmp.cpp.o.d -o CMakeFiles/cacode.dir/ludcmp.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode/ludcmp.cpp +[ 4%] Generating ../generated/easypredict.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true easypredict.sh -make -f src/version/CMakeFiles/version.dir/build.make src/version/CMakeFiles/version.dir/depend -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o -MF CMakeFiles/alp.dir/sls_pvalues.cpp.o.d -o CMakeFiles/alp.dir/sls_pvalues.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_pvalues.cpp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl nucleotide.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h -make[3]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-6-a5d39d9+ds /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/version /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version/CMakeFiles/version.dir/DependInfo.cmake "--color=" -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated +/usr/bin/ar qc libversion.a CMakeFiles/version.dir/Version.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h +/usr/bin/ranlib libversion.a +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl easypredict.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h -make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -make -f src/version/CMakeFiles/version.dir/build.make src/version/CMakeFiles/version.dir/build cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h -make[3]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h.tmp -[ 6%] Building CXX object src/version/CMakeFiles/version.dir/Version.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/c++ -DGIT_SHA1=6-a5d39d9+ds-5 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/src/commons -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT src/version/CMakeFiles/version.dir/Version.cpp.o -MF CMakeFiles/version.dir/Version.cpp.o.d -o CMakeFiles/version.dir/Version.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/version/Version.cpp -[ 7%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_dynprogproblim.cpp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h +[ 4%] Built target version cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h -[ 7%] Generating ../generated/blosum62.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blosum62.out -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 7%] Generating ../generated/taxtocontig.sh.h +[ 4%] Generating ../generated/taxtocontig.sh.h +[ 4%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/nrutil.cpp.o +[ 4%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_random.cpp.o +[ 5%] Generating ../generated/PAM30.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/cacode && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/nrutil.cpp.o -MF CMakeFiles/cacode.dir/nrutil.cpp.o.d -o CMakeFiles/cacode.dir/nrutil.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode/nrutil.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true taxtocontig.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blosum62.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true PAM30.out +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_random.cpp.o -MF CMakeFiles/alp.dir/njn_random.cpp.o.d -o CMakeFiles/alp.dir/njn_random.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_random.cpp +[ 6%] Generating ../generated/CovSeqidQscPercMinDiag.lib.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl taxtocontig.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true CovSeqidQscPercMinDiag.lib +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h +make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 7%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o +[ 7%] Built target local-generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_dynprogprobproto.cpp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 8%] Linking C static library libmicrotar.a +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -P CMakeFiles/microtar.dir/cmake_clean_target.cmake +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl PAM30.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiag.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -E cmake_link_script CMakeFiles/microtar.dir/link.txt --verbose=1 +[ 8%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstat.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_localmaxstat.cpp +/usr/bin/ar qc libmicrotar.a CMakeFiles/microtar.dir/microtar.c.o +/usr/bin/ranlib libmicrotar.a +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h +[ 9%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c: In function ‘base’: /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c:373:16: warning: array subscript ‘te_expr[0]’ is partly outside array bounds of ‘unsigned char[16]’ [-Warray-bounds=] 373 | ret->bound = s->bound; @@ -745,271 +796,256 @@ /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c:88:20: note: object of size 16 allocated by ‘malloc’ 88 | te_expr *ret = malloc(size); | ^~~~~~~~~~~~ -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl taxtocontig.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp -[ 8%] Linking CXX static library libversion.a -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -P CMakeFiles/version.dir/cmake_clean_target.cmake -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -E cmake_link_script CMakeFiles/version.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -[ 9%] Generating ../generated/PAM30.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true PAM30.out -/usr/bin/ar qc libversion.a CMakeFiles/version.dir/Version.cpp.o -/usr/bin/ranlib libversion.a -make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 9%] Built target local-generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl PAM30.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h -[ 9%] Built target version -[ 10%] Generating ../generated/CovSeqidQscPercMinDiag.lib.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true CovSeqidQscPercMinDiag.lib -[ 10%] Generating ../generated/CovSeqidQscPercMinDiagTargetCov.lib.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_localmaxstatmatrix.cpp +[ 9%] Generating ../generated/CovSeqidQscPercMinDiagTargetCov.lib.h +[ 9%] Built target microtar cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true CovSeqidQscPercMinDiagTargetCov.lib -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiag.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiagTargetCov.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h -[ 10%] Generating ../generated/ExpOpt3_8_polished.cs32.lib.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true ExpOpt3_8_polished.cs32.lib +[ 9%] Generating ../generated/ExpOpt3_8_polished.cs32.lib.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp -make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' +[ 9%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -MF CMakeFiles/alp.dir/sls_alp_sim.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_sim.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp_sim.cpp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true ExpOpt3_8_polished.cs32.lib cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h +[ 9%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o -MF CMakeFiles/alp.dir/sls_pvalues.cpp.o.d -o CMakeFiles/alp.dir/sls_pvalues.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_pvalues.cpp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiagTargetCov.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h +[ 10%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl ExpOpt3_8_polished.cs32.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h -[ 10%] Built target cacode +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_dynprogproblim.cpp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h.tmp -[ 10%] Generating ../generated/Library255_may17.lib.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true Library255_may17.lib +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h [ 10%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -MF CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o.d -o CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alignment_evaluer.cpp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h +[ 10%] Generating ../generated/Library255_may17.lib.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true Library255_may17.lib +[ 11%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -MF CMakeFiles/alp.dir/sls_alp_regression.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_regression.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp_regression.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 11%] Generating ../generated/libPolished_8.lib.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true libPolished_8.lib cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl Library255_may17.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h +[ 12%] Linking C static library libtinyexpr.a +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -P CMakeFiles/tinyexpr.dir/cmake_clean_target.cmake +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinyexpr.dir/link.txt --verbose=1 +[ 13%] Generating ../generated/libPolished_8.lib.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true libPolished_8.lib +/usr/bin/ar qc libtinyexpr.a CMakeFiles/tinyexpr.dir/tinyexpr.c.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 11%] Generating ../generated/cs219.lib.h +/usr/bin/ranlib libtinyexpr.a cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl libPolished_8.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true cs219.lib -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h.tmp +make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h +[ 13%] Built target tinyexpr cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h +[ 13%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -MF CMakeFiles/alp.dir/sls_alp.cpp.o.d -o CMakeFiles/alp.dir/sls_alp.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp.cpp +[ 13%] Generating ../generated/cs219.lib.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true cs219.lib +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl cs219.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h +make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h -[ 12%] Linking C static library libtinyexpr.a -[ 12%] Generating ../generated/krona_prelude.html.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -P CMakeFiles/tinyexpr.dir/cmake_clean_target.cmake +[ 13%] Built target cacode +[ 13%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_localmaxstatutil.cpp +[ 13%] Generating ../generated/krona_prelude.html.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true krona_prelude.html -[ 13%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -MF CMakeFiles/alp.dir/sls_alp_regression.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_regression.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp_regression.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinyexpr.dir/link.txt --verbose=1 cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl krona_prelude.html > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h -[ 13%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -MF CMakeFiles/alp.dir/sls_alp.cpp.o.d -o CMakeFiles/alp.dir/sls_alp.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp.cpp -/usr/bin/ar qc libtinyexpr.a CMakeFiles/tinyexpr.dir/tinyexpr.c.o -[ 13%] Generating ../generated/result_viz_prelude.html.zst.h -[ 13%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_localmaxstatutil.cpp +[ 14%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o -MF CMakeFiles/alp.dir/sls_basic.cpp.o.d -o CMakeFiles/alp.dir/sls_basic.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_basic.cpp +[ 14%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o -MF CMakeFiles/alp.dir/sls_alp_data.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_data.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp_data.cpp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp +[ 15%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o -MF CMakeFiles/alp.dir/njn_ioutil.cpp.o.d -o CMakeFiles/alp.dir/njn_ioutil.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_ioutil.cpp +[ 15%] Generating ../generated/result_viz_prelude.html.zst.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true result_viz_prelude.html.zst -/usr/bin/ranlib libtinyexpr.a -make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl result_viz_prelude.html.zst > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h -[ 13%] Built target tinyexpr -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h -[ 14%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o -MF CMakeFiles/alp.dir/sls_basic.cpp.o.d -o CMakeFiles/alp.dir/sls_basic.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_basic.cpp +make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp +[ 15%] Built target ksw2 cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h -[ 15%] Generating ../generated/K4000.crf.h +[ 16%] Generating ../generated/K4000.crf.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true K4000.crf cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl K4000.crf > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h -[ 16%] Generating ../generated/easysearch.sh.h +[ 17%] Generating ../generated/easysearch.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true easysearch.sh -[ 16%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o -MF CMakeFiles/alp.dir/sls_alp_data.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_data.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp_data.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl easysearch.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h -[ 17%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o -MF CMakeFiles/alp.dir/njn_ioutil.cpp.o.d -o CMakeFiles/alp.dir/njn_ioutil.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_ioutil.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h [ 17%] Generating ../generated/easycluster.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true easycluster.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl easycluster.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h [ 17%] Generating ../generated/easytaxonomy.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true easytaxonomy.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl easycluster.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl easytaxonomy.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h [ 17%] Generating ../generated/easyrbh.sh.h +[ 17%] Generating ../generated/blastp.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true easyrbh.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blastp.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 18%] Generating ../generated/blastpgp.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blastpgp.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl easyrbh.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h -[ 17%] Generating ../generated/blastp.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blastp.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blastp.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blastpgp.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h.tmp -[ 18%] Generating ../generated/blastpgp.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h [ 18%] Generating ../generated/map.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blastpgp.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true map.sh -make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 18%] Built target ksw2 -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated [ 18%] Generating ../generated/rbh.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true rbh.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blastpgp.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl map.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h.tmp [ 18%] Generating ../generated/linclust.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true rbh.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true linclust.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl rbh.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl map.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl rbh.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl linclust.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp [ 18%] Generating ../generated/clustering.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true clustering.sh -[ 19%] Generating ../generated/cascaded_clustering.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl clustering.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp +[ 19%] Generating ../generated/cascaded_clustering.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true cascaded_clustering.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h [ 19%] Generating ../generated/update_clustering.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true update_clustering.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl clustering.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl cascaded_clustering.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h -[ 19%] Generating ../generated/searchtargetprofile.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true searchtargetprofile.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl update_clustering.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl searchtargetprofile.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h +[ 19%] Generating ../generated/searchtargetprofile.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true searchtargetprofile.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 19%] Generating ../generated/createindex.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true createindex.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl searchtargetprofile.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl createindex.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h [ 20%] Generating ../generated/createtaxdb.sh.h -[ 20%] Generating ../generated/createindex.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h -[ 20%] Generating ../generated/translated_search.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true createindex.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true createtaxdb.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true translated_search.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl createindex.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl createtaxdb.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl translated_search.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h.tmp -[ 20%] Generating ../generated/taxpercontig.sh.h +[ 20%] Generating ../generated/translated_search.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true translated_search.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true taxpercontig.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl taxpercontig.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h +[ 20%] Generating ../generated/taxpercontig.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true taxpercontig.sh [ 20%] Generating ../generated/multihitdb.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl translated_search.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true multihitdb.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl taxpercontig.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl multihitdb.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h [ 21%] Generating ../generated/enrich.sh.h [ 22%] Generating ../generated/multihitsearch.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true multihitsearch.sh -[ 23%] Generating ../generated/blastn.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true enrich.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blastn.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl multihitdb.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl multihitsearch.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl enrich.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blastn.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h +[ 23%] Generating ../generated/blastn.sh.h [ 24%] Generating ../generated/searchslicedtargetprofile.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blastn.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true searchslicedtargetprofile.sh -[ 25%] Generating ../generated/databases.sh.h -[ 27%] Generating ../generated/taxonomy.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true taxonomy.sh -[ 27%] Generating ../generated/linsearch.sh.h -[ 28%] Generating ../generated/nucleotide_clustering.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true linsearch.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true databases.sh -[ 28%] Generating ../generated/iterativepp.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide_clustering.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true iterativepp.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blastn.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl searchslicedtargetprofile.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 25%] Generating ../generated/taxonomy.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true taxonomy.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl taxonomy.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl linsearch.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl databases.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl nucleotide_clustering.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl iterativepp.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h +[ 26%] Generating ../generated/linsearch.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true linsearch.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 27%] Generating ../generated/databases.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true databases.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl linsearch.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 28%] Generating ../generated/nucleotide_clustering.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide_clustering.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl databases.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl nucleotide_clustering.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h +[ 28%] Generating ../generated/iterativepp.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true iterativepp.sh [ 29%] Generating ../generated/tsv2exprofiledb.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true tsv2exprofiledb.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl tsv2exprofiledb.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl iterativepp.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' @@ -1022,28 +1058,28 @@ make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' make -f lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/build.make lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/build make[3]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -[ 29%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/Alignment.cpp.o -[ 30%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/CompressedA3M.cpp.o +[ 30%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/PSSMCalculator.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/MsaFilter.cpp.o +[ 32%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/Main.cpp.o +[ 32%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/MultipleAlignment.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 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/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment/BandedNucleotideAligner.cpp [ 33%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/rescorediagonal.cpp.o -[ 33%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/Main.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/rescorediagonal.cpp.o -MF CMakeFiles/mmseqs-framework.dir/alignment/rescorediagonal.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/alignment/rescorediagonal.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment/rescorediagonal.cpp [ 34%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/AlignmentSymmetry.cpp.o +[ 34%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/Main.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr 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/usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons 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CMakeFiles/mmseqs-framework.dir/clustering/AlignmentSymmetry.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering/AlignmentSymmetry.cpp [ 34%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/Clustering.cpp.o @@ -1191,6 +1227,10 @@ cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/appenddbtoindex.cpp [ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib 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-I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/apply.cpp +[ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/clusthash.cpp +[ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/compress.cpp In file included from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd/simd.h:9, from /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons/CSProfile.h:9, @@ -1203,8 +1243,6 @@ /usr/include/c++/13/bits/stl_algobase.h:931:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744065119617024 and 18446744073709551612 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 931 | *__first = __tmp; | ~~~~~~~~~^~~~~~~ -[ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/clusthash.cpp In function ‘typename __gnu_cxx::__enable_if::__value, void>::__type std::__fill_a1(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’, inlined from ‘void std::__fill_a(_FIte, _FIte, const _Tp&) [with _FIte = float*; _Tp = double]’ at /usr/include/c++/13/bits/stl_algobase.h:977:21, inlined from ‘void std::fill(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’ at /usr/include/c++/13/bits/stl_algobase.h:1007:20, @@ -1213,8 +1251,6 @@ /usr/include/c++/13/bits/stl_algobase.h:931:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744065119617024 and 18446744073709551612 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 931 | *__first = __tmp; | ~~~~~~~~~^~~~~~~ -[ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/compress.cpp [ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 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99%] Building CXX object src/CMakeFiles/metaeuk.dir/workflow/EasyPredict.cpp.o +[ 99%] Building CXX object src/CMakeFiles/metaeuk.dir/workflow/TaxToContig.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT src/CMakeFiles/metaeuk.dir/exonpredictor/resultspercontig.cpp.o -MF CMakeFiles/metaeuk.dir/exonpredictor/resultspercontig.cpp.o.d -o CMakeFiles/metaeuk.dir/exonpredictor/resultspercontig.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/exonpredictor/resultspercontig.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib 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-I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT src/CMakeFiles/metaeuk.dir/workflow/PredictExons.cpp.o -MF CMakeFiles/metaeuk.dir/workflow/PredictExons.cpp.o.d -o CMakeFiles/metaeuk.dir/workflow/PredictExons.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/workflow/PredictExons.cpp -[ 99%] Building CXX object src/CMakeFiles/metaeuk.dir/workflow/EasyPredict.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT src/CMakeFiles/metaeuk.dir/workflow/EasyPredict.cpp.o -MF CMakeFiles/metaeuk.dir/workflow/EasyPredict.cpp.o.d -o CMakeFiles/metaeuk.dir/workflow/EasyPredict.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/workflow/EasyPredict.cpp -[ 99%] Building CXX object src/CMakeFiles/metaeuk.dir/workflow/TaxToContig.cpp.o -[100%] Building CXX object src/CMakeFiles/metaeuk.dir/metaeuk.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT src/CMakeFiles/metaeuk.dir/workflow/TaxToContig.cpp.o -MF CMakeFiles/metaeuk.dir/workflow/TaxToContig.cpp.o.d -o CMakeFiles/metaeuk.dir/workflow/TaxToContig.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/workflow/TaxToContig.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT src/CMakeFiles/metaeuk.dir/metaeuk.cpp.o -MF CMakeFiles/metaeuk.dir/metaeuk.cpp.o.d -o CMakeFiles/metaeuk.dir/metaeuk.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/metaeuk.cpp [100%] Linking CXX executable metaeuk @@ -1426,7 +1462,7 @@ /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' dh_auto_test - rm -fr -- /tmp/dh-xdg-rundir-Xx2Smhx4 + rm -fr -- /tmp/dh-xdg-rundir-98VyKtMz create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/metaeuk.substvars debian/metaeuk-examples.substvars @@ -1463,31 +1499,31 @@ install -m0755 -d debian/metaeuk-examples/usr/share/doc/metaeuk-examples install -p -m0644 debian/copyright debian/metaeuk-examples/usr/share/doc/metaeuk-examples/copyright dh_installchangelogs - install -m0755 -d debian/metaeuk/usr/share/doc/metaeuk - install -p -m0644 debian/.debhelper/generated/metaeuk/dh_installchangelogs.dch.trimmed debian/metaeuk/usr/share/doc/metaeuk/changelog.Debian install -m0755 -d debian/metaeuk-examples/usr/share/doc/metaeuk-examples install -p -m0644 debian/.debhelper/generated/metaeuk-examples/dh_installchangelogs.dch.trimmed debian/metaeuk-examples/usr/share/doc/metaeuk-examples/changelog.Debian + install -m0755 -d debian/metaeuk/usr/share/doc/metaeuk + install -p -m0644 debian/.debhelper/generated/metaeuk/dh_installchangelogs.dch.trimmed debian/metaeuk/usr/share/doc/metaeuk/changelog.Debian dh_perl dh_link dh_strip_nondeterminism dh_compress - cd debian/metaeuk-examples cd debian/metaeuk + cd debian/metaeuk-examples chmod a-x usr/share/doc/metaeuk/README.md usr/share/doc/metaeuk/changelog.Debian - chmod a-x usr/share/doc/metaeuk-examples/changelog.Debian usr/share/doc/metaeuk/example-data/DB.fasta usr/share/doc/metaeuk/example-data/QUERY.fasta usr/share/doc/metaeuk/example-data/VTML80.out usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiag.lib usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiagTargetCov.lib usr/share/doc/metaeuk/example-data/resources/ExpOpt3_8_polished.cs32.lib usr/share/doc/metaeuk/example-data/resources/K4000.crf usr/share/doc/metaeuk/example-data/resources/Library255_may17.lib usr/share/doc/metaeuk/example-data/resources/cs219.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_255.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_32.lib usr/share/doc/metaeuk/example-data/workflow/blastpgp.sh usr/share/doc/metaeuk/example-data/workflow/cascaded_clustering.sh usr/share/doc/metaeuk/example-data/workflow/createtaxdb.sh usr/share/doc/metaeuk/example-data/workflow/databases.sh usr/share/doc/metaeuk/example-data/workflow/enrich.sh usr/share/doc/metaeuk/example-data/workflow/linclust.sh usr/share/doc/metaeuk/example-data/workflow/nucleotide_clustering.sh usr/share/doc/metaeuk/example-data/workflow/searchslicedtargetprofile.sh usr/share/doc/metaeuk/example-data/workflow/taxpercontig.sh usr/share/doc/metaeuk/example-data/workflow/update_clustering.sh gzip -9nf usr/share/doc/metaeuk/README.md usr/share/doc/metaeuk/changelog.Debian + chmod a-x usr/share/doc/metaeuk-examples/changelog.Debian usr/share/doc/metaeuk/example-data/DB.fasta usr/share/doc/metaeuk/example-data/QUERY.fasta usr/share/doc/metaeuk/example-data/VTML80.out usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiag.lib usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiagTargetCov.lib usr/share/doc/metaeuk/example-data/resources/ExpOpt3_8_polished.cs32.lib usr/share/doc/metaeuk/example-data/resources/K4000.crf usr/share/doc/metaeuk/example-data/resources/Library255_may17.lib usr/share/doc/metaeuk/example-data/resources/cs219.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_255.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_32.lib usr/share/doc/metaeuk/example-data/workflow/blastpgp.sh usr/share/doc/metaeuk/example-data/workflow/cascaded_clustering.sh usr/share/doc/metaeuk/example-data/workflow/createtaxdb.sh usr/share/doc/metaeuk/example-data/workflow/databases.sh usr/share/doc/metaeuk/example-data/workflow/enrich.sh usr/share/doc/metaeuk/example-data/workflow/linclust.sh usr/share/doc/metaeuk/example-data/workflow/nucleotide_clustering.sh usr/share/doc/metaeuk/example-data/workflow/searchslicedtargetprofile.sh usr/share/doc/metaeuk/example-data/workflow/taxpercontig.sh usr/share/doc/metaeuk/example-data/workflow/update_clustering.sh gzip -9nf usr/share/doc/metaeuk-examples/changelog.Debian usr/share/doc/metaeuk/example-data/DB.fasta usr/share/doc/metaeuk/example-data/QUERY.fasta usr/share/doc/metaeuk/example-data/VTML80.out usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiag.lib usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiagTargetCov.lib usr/share/doc/metaeuk/example-data/resources/ExpOpt3_8_polished.cs32.lib usr/share/doc/metaeuk/example-data/resources/K4000.crf usr/share/doc/metaeuk/example-data/resources/Library255_may17.lib usr/share/doc/metaeuk/example-data/resources/cs219.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_255.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_32.lib usr/share/doc/metaeuk/example-data/workflow/blastpgp.sh usr/share/doc/metaeuk/example-data/workflow/cascaded_clustering.sh usr/share/doc/metaeuk/example-data/workflow/createtaxdb.sh usr/share/doc/metaeuk/example-data/workflow/databases.sh usr/share/doc/metaeuk/example-data/workflow/enrich.sh usr/share/doc/metaeuk/example-data/workflow/linclust.sh usr/share/doc/metaeuk/example-data/workflow/nucleotide_clustering.sh usr/share/doc/metaeuk/example-data/workflow/searchslicedtargetprofile.sh usr/share/doc/metaeuk/example-data/workflow/taxpercontig.sh usr/share/doc/metaeuk/example-data/workflow/update_clustering.sh cd '/build/reproducible-path/metaeuk-6-a5d39d9+ds' cd '/build/reproducible-path/metaeuk-6-a5d39d9+ds' dh_fixperms find debian/metaeuk ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/metaeuk-examples ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/metaeuk-examples/usr/share/doc -type f -a -true -a ! -regex 'debian/metaeuk-examples/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk/usr/share/doc -type f -a -true -a ! -regex 'debian/metaeuk/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/metaeuk-examples/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 + find debian/metaeuk-examples/usr/share/doc -type f -a -true -a ! -regex 'debian/metaeuk-examples/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/metaeuk-examples -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/metaeuk-examples/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/metaeuk -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/metaeuk-examples -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing dh_dwz -a @@ -1513,33 +1549,33 @@ debian/rules override_dh_gencontrol make[1]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds' dh_gencontrol -- -Vsimde:Built-Using="simde (= 0.8.0-1), " + install -m0755 -d debian/metaeuk-examples/DEBIAN + echo misc:Depends= >> debian/metaeuk-examples.substvars + echo misc:Pre-Depends= >> debian/metaeuk-examples.substvars + dpkg-gencontrol -pmetaeuk-examples -ldebian/changelog -Tdebian/metaeuk-examples.substvars -cdebian/control -Pdebian/metaeuk-examples "-Vsimde:Built-Using=simde (= 0.8.0-1), " install -m0755 -d debian/metaeuk/DEBIAN echo misc:Depends= >> debian/metaeuk.substvars echo misc:Pre-Depends= >> debian/metaeuk.substvars install -m0755 -d debian/.debhelper/metaeuk/dbgsym-root/DEBIAN dpkg-gencontrol -pmetaeuk -ldebian/changelog -Tdebian/metaeuk.substvars -cdebian/control -Pdebian/.debhelper/metaeuk/dbgsym-root "-Vsimde:Built-Using=simde (= 0.8.0-1), " -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=metaeuk-dbgsym "-DDepends=metaeuk (= \${binary:Version})" "-DDescription=debug symbols for metaeuk" -DBuild-Ids=8dfe0c56e2591418ffdf5a152f20ee6fa1919660 -DSection=debug -UMulti-Arch -UReplaces -UBreaks - install -m0755 -d debian/metaeuk-examples/DEBIAN - echo misc:Depends= >> debian/metaeuk-examples.substvars - echo misc:Pre-Depends= >> debian/metaeuk-examples.substvars - dpkg-gencontrol -pmetaeuk-examples -ldebian/changelog -Tdebian/metaeuk-examples.substvars -cdebian/control -Pdebian/metaeuk-examples "-Vsimde:Built-Using=simde (= 0.8.0-1), " chmod 0644 -- debian/.debhelper/metaeuk/dbgsym-root/DEBIAN/control dpkg-gencontrol -pmetaeuk -ldebian/changelog -Tdebian/metaeuk.substvars -cdebian/control -Pdebian/metaeuk "-Vsimde:Built-Using=simde (= 0.8.0-1), " chmod 0644 -- debian/metaeuk-examples/DEBIAN/control chmod 0644 -- debian/metaeuk/DEBIAN/control make[1]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds' dh_md5sums - install -m0755 -d debian/metaeuk/DEBIAN install -m0755 -d debian/metaeuk-examples/DEBIAN - cd debian/metaeuk >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + install -m0755 -d debian/metaeuk/DEBIAN cd debian/metaeuk-examples >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + cd debian/metaeuk >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/metaeuk-examples/DEBIAN/md5sums chmod 0644 -- debian/metaeuk/DEBIAN/md5sums install -m0755 -d debian/.debhelper/metaeuk/dbgsym-root/DEBIAN cd debian/.debhelper/metaeuk/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/metaeuk/dbgsym-root/DEBIAN/md5sums dh_builddeb - dpkg-deb --root-owner-group --build debian/.debhelper/metaeuk/dbgsym-root .. dpkg-deb --root-owner-group --build debian/metaeuk .. + dpkg-deb --root-owner-group --build debian/.debhelper/metaeuk/dbgsym-root .. dpkg-deb --root-owner-group --build debian/metaeuk-examples .. dpkg-deb: building package 'metaeuk' in '../metaeuk_6-a5d39d9+ds-5_arm64.deb'. dpkg-deb: building package 'metaeuk-dbgsym' in '../metaeuk-dbgsym_6-a5d39d9+ds-5_arm64.deb'. @@ -1551,12 +1587,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1364002/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1364002/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2932693 and its subdirectories -I: Current time: Fri May 30 14:39:11 -12 2025 -I: pbuilder-time-stamp: 1748659151 +I: removing directory /srv/workspace/pbuilder/1364002 and its subdirectories +I: Current time: Sun Apr 28 10:18:52 +14 2024 +I: pbuilder-time-stamp: 1714249132