Diff of the two buildlogs: -- --- b1/build.log 2024-09-03 20:36:07.675658291 +0000 +++ b2/build.log 2024-09-03 20:53:26.675583083 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Oct 6 14:41:19 -12 2025 -I: pbuilder-time-stamp: 1759804879 +I: Current time: Wed Sep 4 10:36:19 +14 2024 +I: pbuilder-time-stamp: 1725395779 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -25,52 +25,84 @@ dpkg-source: info: unpacking massxpert2_8.5.0-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2754393/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1584344/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Sep 3 20:36 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1584344/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1584344/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='9808fd0e88da41b5980944aa8f6331ca' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2754393' - PS1='# ' - PS2='> ' + INVOCATION_ID=28bdb4294d7747b2a812cfcf589e4299 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1584344 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.5ezqW6Rj/pbuilderrc_NB2e --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.5ezqW6Rj/b1 --logfile b1/build.log massxpert2_8.5.0-1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.5ezqW6Rj/pbuilderrc_koOR --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.5ezqW6Rj/b2 --logfile b2/build.log massxpert2_8.5.0-1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.1.0-25-cloud-arm64 #1 SMP Debian 6.1.106-3 (2024-08-26) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-25-cloud-arm64 #1 SMP Debian 6.1.106-3 (2024-08-26) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2754393/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1584344/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -625,7 +657,7 @@ Get: 481 http://deb.debian.org/debian trixie/main arm64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 482 http://deb.debian.org/debian trixie/main arm64 texlive-base all 2024.20240706-1 [22.7 MB] Get: 483 http://deb.debian.org/debian trixie/main arm64 texlive-fonts-extra all 2024.20240706-2 [623 MB] -Fetched 983 MB in 15s (66.6 MB/s) +Fetched 983 MB in 38s (26.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19885 files and directories currently installed.) @@ -2199,8 +2231,8 @@ Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Tue Oct 7 02:43:48 UTC 2025. -Universal Time is now: Tue Oct 7 02:43:48 UTC 2025. +Local time is now: Tue Sep 3 20:38:04 UTC 2024. +Universal Time is now: Tue Sep 3 20:38:04 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:arm64 (1.83.0-3.2) ... @@ -2821,7 +2853,11 @@ fakeroot is already the newest version (1.36-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/massxpert2-8.5.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../massxpert2_8.5.0-1_source.changes +I: user script /srv/workspace/pbuilder/1584344/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/1584344/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/massxpert2-8.5.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../massxpert2_8.5.0-1_source.changes dpkg-buildpackage: info: source package massxpert2 dpkg-buildpackage: info: source version 8.5.0-1 dpkg-buildpackage: info: source distribution unstable @@ -2829,11 +2865,11 @@ dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean -PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games +PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path dh clean debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/massxpert2-8.5.0' -PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games +PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ @@ -2854,13 +2890,13 @@ rm -f doc/user-manual/massxpert2-doc.pdf make[1]: Leaving directory '/build/reproducible-path/massxpert2-8.5.0' debian/rules build -PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games +PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path dh build dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/massxpert2-8.5.0' -PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games +PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path mkdir -p debian/build mkdir -p debian/tmp cd debian/build && cmake -DCMAKE_BUILD_TYPE=Release -DBUILD_USER_MANUAL=1 -DCMAKE_INSTALL_PREFIX=/usr ../.. @@ -2902,20 +2938,20 @@ -- Main CMAKE_BINARY_DIR: /build/reproducible-path/massxpert2-8.5.0/debian/build -- CMAKE_CXX_COMPILER: /usr/bin/c++ -** (process:2805642): WARNING **: 14:45:36.463: Unable to create profile directory (Permission denied) (13) -** Message: 14:45:36.475: Cannot create profile directory /nonexistent/first-build/.config/inkscape. -** Message: 14:45:36.475: Inkscape will run with default settings, and new settings will not be saved. +** (process:1627996): WARNING **: 10:39:41.845: Unable to create profile directory (Permission denied) (13) +** Message: 10:39:41.858: Cannot create profile directory /nonexistent/second-build/.config/inkscape. +** Message: 10:39:41.858: Inkscape will run with default settings, and new settings will not be saved. Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories -** (inkscape:2805642): WARNING **: 14:45:36.789: Could not create directory '/nonexistent/first-build/.config/inkscape' +** (inkscape:1627996): WARNING **: 10:39:42.069: Could not create directory '/nonexistent/second-build/.config/inkscape' -** (inkscape:2805642): WARNING **: 14:45:36.790: Could not create extension error log file '/nonexistent/first-build/.config/inkscape/extension-errors.log' +** (inkscape:1627996): WARNING **: 10:39:42.069: Could not create extension error log file '/nonexistent/second-build/.config/inkscape/extension-errors.log' -(inkscape:2805642): Gtk-CRITICAL **: 14:45:36.831: Unable to create user data directory '/nonexistent/first-build/.local/share' for storing the recently used files list: Permission denied +(inkscape:1627996): Gtk-CRITICAL **: 10:39:42.111: Unable to create user data directory '/nonexistent/second-build/.local/share' for storing the recently used files list: Permission denied -** (inkscape:2805642): WARNING **: 14:45:36.831: Failed to wrap object of type 'GtkRecentManager'. Hint: this error is commonly caused by failing to call a library init() function. +** (inkscape:1627996): WARNING **: 10:39:42.111: Failed to wrap object of type 'GtkRecentManager'. Hint: this error is commonly caused by failing to call a library init() function. -- Adding subdirectory src for TARGET: massxpert2 Now configuring src/ for massxpert2 @@ -2979,13 +3015,13 @@ -- ~~~~~~~~~~~~~~~~~~~~~~~~ SUMMARY ~~~~~~~~~~~~~~~~~~~~~~~~ --- Configuring done (2.5s) +-- Configuring done (1.5s) -- Generating done (0.1s) -- Build files have been written to: /build/reproducible-path/massxpert2-8.5.0/debian/build make[1]: Leaving directory '/build/reproducible-path/massxpert2-8.5.0' debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/massxpert2-8.5.0' -PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games +PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path cd debian/build && make make[2]: Entering directory '/build/reproducible-path/massxpert2-8.5.0/debian/build' /usr/bin/cmake -S/build/reproducible-path/massxpert2-8.5.0 -B/build/reproducible-path/massxpert2-8.5.0/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 @@ -7867,10 +7903,10 @@ make[2]: Leaving directory '/build/reproducible-path/massxpert2-8.5.0/debian/build' make[1]: Leaving directory '/build/reproducible-path/massxpert2-8.5.0' dh_auto_test - rm -fr -- /tmp/dh-xdg-rundir-qFYeC6Pb + rm -fr -- /tmp/dh-xdg-rundir-Ow4pfYKn create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary -PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games +PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path dh binary dh_testroot dh_prep @@ -7881,7 +7917,7 @@ install -m0755 -d debian/massxpert2-data/usr/share/massxpert2/data debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/massxpert2-8.5.0' -PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games +PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path cd debian/build && DESTDIR=../tmp make install make[2]: Entering directory '/build/reproducible-path/massxpert2-8.5.0/debian/build' /usr/bin/cmake -S/build/reproducible-path/massxpert2-8.5.0 -B/build/reproducible-path/massxpert2-8.5.0/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 @@ -10636,16 +10672,16 @@ install -m0755 -d debian/massxpert2-doc/usr/share/doc-base/ install -p -m0644 debian/massxpert2-doc.doc-base debian/massxpert2-doc/usr/share/doc-base/massxpert2-doc.massxpert2-user-manual dh_installchangelogs + install -m0755 -d debian/massxpert2-doc/usr/share/doc/massxpert2-doc + install -p -m0644 debian/.debhelper/generated/massxpert2-doc/dh_installchangelogs.dch.trimmed debian/massxpert2-doc/usr/share/doc/massxpert2-doc/changelog.Debian + install -m0755 -d debian/massxpert-doc/usr/share/doc/massxpert-doc + install -p -m0644 debian/.debhelper/generated/massxpert-doc/dh_installchangelogs.dch.trimmed debian/massxpert-doc/usr/share/doc/massxpert-doc/changelog.Debian + install -m0755 -d debian/massxpert/usr/share/doc/massxpert + install -p -m0644 debian/.debhelper/generated/massxpert/dh_installchangelogs.dch.trimmed debian/massxpert/usr/share/doc/massxpert/changelog.Debian install -m0755 -d debian/massxpert2-data/usr/share/doc/massxpert2-data install -p -m0644 debian/.debhelper/generated/massxpert2-data/dh_installchangelogs.dch.trimmed debian/massxpert2-data/usr/share/doc/massxpert2-data/changelog.Debian install -m0755 -d debian/massxpert2/usr/share/doc/massxpert2 install -p -m0644 debian/.debhelper/generated/massxpert2/dh_installchangelogs.dch.trimmed debian/massxpert2/usr/share/doc/massxpert2/changelog.Debian - install -m0755 -d debian/massxpert/usr/share/doc/massxpert - install -p -m0644 debian/.debhelper/generated/massxpert/dh_installchangelogs.dch.trimmed debian/massxpert/usr/share/doc/massxpert/changelog.Debian - install -m0755 -d debian/massxpert-doc/usr/share/doc/massxpert-doc - install -p -m0644 debian/.debhelper/generated/massxpert-doc/dh_installchangelogs.dch.trimmed debian/massxpert-doc/usr/share/doc/massxpert-doc/changelog.Debian - install -m0755 -d debian/massxpert2-doc/usr/share/doc/massxpert2-doc - install -p -m0644 debian/.debhelper/generated/massxpert2-doc/dh_installchangelogs.dch.trimmed debian/massxpert2-doc/usr/share/doc/massxpert2-doc/changelog.Debian dh_installman install -m0755 -d debian/massxpert2/usr/share/man/man1/ install -p -m0644 debian/tmp/usr/share/man/man1/massxpert2.1 debian/massxpert2/usr/share/man/man1/massxpert2.1 @@ -10663,8 +10699,8 @@ ln -s ../../../../../javascript/jquery/jquery.min.js debian/massxpert2-doc/usr/share/doc/massxpert2/html/static/js/jquery-1.10.2.min.js dh_strip_nondeterminism Using 1721645320 as canonical time - Normalizing debian/massxpert2/usr/share/icons/hicolor/64x64/apps/massxpert2.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2/usr/share/icons/hicolor/48x48/apps/massxpert2.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2/usr/share/icons/hicolor/64x64/apps/massxpert2.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2/usr/share/icons/hicolor/32x32/apps/massxpert2.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2/usr/share/icons/hicolor/16x16/apps/massxpert2.png using File::StripNondeterminism::handlers::png Using 1721645320 as canonical time @@ -10713,34 +10749,20 @@ Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/static/images/dots-green.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/static/images/dots-grayongreen.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/static/images/dots-gray.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-massxpert-peak-shaper-dlg-results-tab.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-massxpert-protein-fragment-calculation.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-massxpert-utilities-menu.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-nucac-bond-formation.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-nucac-polymer.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-peptide-bond-formation.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-pol-chem-defs-directory-protein-and-saccharide.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-prot-cleavage.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-prot-fragmentation.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-prot-polymer.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-protein-monomer-acidobasic-data.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-sacch-bond-formation.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-sacch-polymer.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertcalc-protein-1-letter-chempad.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertcalc-protein-1-letter-recorder.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertcalc-protein-1-letter.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertcalc-select-pol-chem-def.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-cleavages.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-cross-linkers.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-fragmentation-dna-base-loss-generic-method.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-fragmentation-dna-base-loss-specific-frag-rules-method.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-fragmentation-dna-simplest-case.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-isotopes.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-modifications.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-monomers-mass-differences.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-monomers.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-pol-chem-def-wnd.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-select-pol-chem-def.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-3-letter-code-whole-process.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-cfp-chromophore-disulfide-bond-account-cross-links.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-choose-pol-chem-def.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-cleavages.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-compositions.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-cross-link-monomers.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-filtering-oligomer-data.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-find-sequence-dlg.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-fragmentation-cross-linked-oligomer.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-fragmentation.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-mass-search.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-modify-monomer-manually-defined-modif.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-modify-monomer.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-modify-polymer.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertcalc-select-pol-chem-def.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertdef-cleavages.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertdef-cross-linkers.png using File::StripNondeterminism::handlers::png @@ -10755,20 +10777,6 @@ Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertdef-select-pol-chem-def.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-3-letter-code-whole-process.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-cfp-chromophore-disulfide-bond-account-cross-links.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-choose-pol-chem-def.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-cleavages.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-compositions.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-cross-link-monomers.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-filtering-oligomer-data.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-find-sequence-dlg.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-fragmentation-cross-linked-oligomer.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-fragmentation.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-mass-search.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-modify-monomer-manually-defined-modif.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-modify-monomer.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-modify-polymer.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-mz-ratio-calculator.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-net-charge-pka-ph-pi.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-protein-main-view.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-select-sample-sequence.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-sequence-editor-bad-char.png using File::StripNondeterminism::handlers::png @@ -10783,34 +10791,48 @@ Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/static/images/logo.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/static/images/tick.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/static/images/icons.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-massxpert-utilities-menu.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-nucac-bond-formation.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-nucac-polymer.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-peptide-bond-formation.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-pol-chem-defs-directory-protein-and-saccharide.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-prot-cleavage.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-prot-fragmentation.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-prot-polymer.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-protein-monomer-acidobasic-data.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-sacch-bond-formation.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-sacch-polymer.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertcalc-protein-1-letter-chempad.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertcalc-protein-1-letter-recorder.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertcalc-protein-1-letter.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-3-letter-code-whole-process.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-cfp-chromophore-disulfide-bond-account-cross-links.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-choose-pol-chem-def.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-cleavages.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-compositions.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-cross-link-monomers.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-filtering-oligomer-data.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-find-sequence-dlg.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-fragmentation-cross-linked-oligomer.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-fragmentation.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-mass-search.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-modify-monomer-manually-defined-modif.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-modify-monomer.png using File::StripNondeterminism::handlers::png - Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-modify-polymer.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertcalc-protein-1-letter-recorder.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertcalc-protein-1-letter.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertcalc-select-pol-chem-def.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-cleavages.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-cross-linkers.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-fragmentation-dna-base-loss-generic-method.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-fragmentation-dna-base-loss-specific-frag-rules-method.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-fragmentation-dna-simplest-case.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-isotopes.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-modifications.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-monomers-mass-differences.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-monomers.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-pol-chem-def-wnd.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertdef-select-pol-chem-def.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-massxpert-peak-shaper-dlg-results-tab.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-massxpert-protein-fragment-calculation.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-massxpert-utilities-menu.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-nucac-bond-formation.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-nucac-polymer.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-peptide-bond-formation.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-pol-chem-defs-directory-protein-and-saccharide.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-prot-cleavage.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-prot-fragmentation.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-prot-polymer.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-protein-monomer-acidobasic-data.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-sacch-bond-formation.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-sacch-polymer.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertcalc-protein-1-letter-chempad.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-choose-pol-chem-def.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-cleavages.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-compositions.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-cross-link-monomers.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-filtering-oligomer-data.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-find-sequence-dlg.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-fragmentation-cross-linked-oligomer.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-fragmentation.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-mass-search.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-modify-monomer-manually-defined-modif.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-modify-monomer.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-modify-polymer.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-mz-ratio-calculator.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertedit-net-charge-pka-ph-pi.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-mz-ratio-calculator.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-net-charge-pka-ph-pi.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertedit-protein-main-view.png using File::StripNondeterminism::handlers::png @@ -10825,10 +10847,24 @@ Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertminer-mz-z-filled-output-mz-list.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/print-xpertminer-mzlab-wnd.png using File::StripNondeterminism::handlers::png Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-dna-fragmentation.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-massxpert-utilities-menu.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-nucac-bond-formation.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-nucac-polymer.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-peptide-bond-formation.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-pol-chem-defs-directory-protein-and-saccharide.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-prot-cleavage.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-prot-fragmentation.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-prot-polymer.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-protein-monomer-acidobasic-data.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-sacch-bond-formation.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-sacch-polymer.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertcalc-protein-1-letter-chempad.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertcalc-protein-1-letter-recorder.png using File::StripNondeterminism::handlers::png + Normalizing debian/massxpert2-doc/usr/share/doc/massxpert2/html/images/web-xpertcalc-protein-1-letter.png using File::StripNondeterminism::handlers::png rm -f debian/massxpert-doc.debhelper.log debian/massxpert.debhelper.log debian/massxpert2-data.debhelper.log debian/massxpert2-doc.debhelper.log debian/massxpert2.debhelper.log debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/massxpert2-8.5.0' -PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games +PATH: /build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/build/reproducible-path/massxpert2-8.5.0/doc/user-manual/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path dh_compress -X.pdf cd debian/massxpert cd debian/massxpert-doc @@ -10836,13 +10872,13 @@ cd debian/massxpert2-data cd debian/massxpert2-doc chmod a-x usr/share/doc/massxpert/changelog.Debian - chmod a-x usr/share/doc/massxpert2-data/changelog.Debian chmod a-x usr/share/doc/massxpert-doc/changelog.Debian + chmod a-x usr/share/doc/massxpert2-data/changelog.Debian chmod a-x usr/share/doc/massxpert2/changelog.Debian usr/share/man/man1/massxpert2.1 - gzip -9nf usr/share/doc/massxpert2-data/changelog.Debian gzip -9nf usr/share/doc/massxpert/changelog.Debian - gzip -9nf usr/share/doc/massxpert-doc/changelog.Debian gzip -9nf usr/share/doc/massxpert2/changelog.Debian usr/share/man/man1/massxpert2.1 + gzip -9nf usr/share/doc/massxpert-doc/changelog.Debian + gzip -9nf usr/share/doc/massxpert2-data/changelog.Debian cd '/build/reproducible-path/massxpert2-8.5.0' cd '/build/reproducible-path/massxpert2-8.5.0' cd '/build/reproducible-path/massxpert2-8.5.0' @@ -10857,22 +10893,22 @@ find debian/massxpert2 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/massxpert2-data -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/massxpert2-doc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 - find debian/massxpert ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/massxpert-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s + find debian/massxpert ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/massxpert2 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/massxpert/usr/share/doc -type f -a -true -a ! -regex 'debian/massxpert/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/massxpert-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/massxpert-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/massxpert/usr/share/doc -type f -a -true -a ! -regex 'debian/massxpert/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/massxpert-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/massxpert/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/massxpert2/usr/share/doc -type f -a -true -a ! -regex 'debian/massxpert2/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/massxpert2-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/massxpert-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/massxpert -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/massxpert2-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/massxpert2/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/massxpert2-data ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/massxpert2/usr/share/man debian/massxpert2/usr/share/applications -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/massxpert2-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/massxpert2-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/massxpert2 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/massxpert2-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/massxpert2-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/massxpert2/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/massxpert2-data/usr/share/doc -type f -a -true -a ! -regex 'debian/massxpert2-data/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/massxpert2-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 @@ -10913,51 +10949,51 @@ echo misc:Depends= >> debian/massxpert-doc.substvars echo misc:Pre-Depends= >> debian/massxpert-doc.substvars dpkg-gencontrol -pmassxpert-doc -ldebian/changelog -Tdebian/massxpert-doc.substvars -cdebian/control -Pdebian/massxpert-doc - install -m0755 -d debian/massxpert/DEBIAN - echo misc:Depends= >> debian/massxpert.substvars - echo misc:Pre-Depends= >> debian/massxpert.substvars - dpkg-gencontrol -pmassxpert -ldebian/changelog -Tdebian/massxpert.substvars -cdebian/control -Pdebian/massxpert + install -m0755 -d debian/massxpert2-data/DEBIAN + echo misc:Depends= >> debian/massxpert2-data.substvars + echo misc:Pre-Depends= >> debian/massxpert2-data.substvars + dpkg-gencontrol -pmassxpert2-data -ldebian/changelog -Tdebian/massxpert2-data.substvars -cdebian/control -Pdebian/massxpert2-data install -m0755 -d debian/massxpert2-doc/DEBIAN echo misc:Depends= >> debian/massxpert2-doc.substvars echo misc:Pre-Depends= >> debian/massxpert2-doc.substvars dpkg-gencontrol -pmassxpert2-doc -ldebian/changelog -Tdebian/massxpert2-doc.substvars -cdebian/control -Pdebian/massxpert2-doc + install -m0755 -d debian/massxpert/DEBIAN + echo misc:Depends= >> debian/massxpert.substvars + echo misc:Pre-Depends= >> debian/massxpert.substvars + dpkg-gencontrol -pmassxpert -ldebian/changelog -Tdebian/massxpert.substvars -cdebian/control -Pdebian/massxpert install -m0755 -d debian/massxpert2/DEBIAN echo misc:Depends= >> debian/massxpert2.substvars echo misc:Pre-Depends= >> debian/massxpert2.substvars install -m0755 -d debian/.debhelper/massxpert2/dbgsym-root/DEBIAN dpkg-gencontrol -pmassxpert2 -ldebian/changelog -Tdebian/massxpert2.substvars -cdebian/control -Pdebian/.debhelper/massxpert2/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=massxpert2-dbgsym "-DDepends=massxpert2 (= \${binary:Version})" "-DDescription=debug symbols for massxpert2" -DBuild-Ids=bb11a42e4aa772c5f03cfdddb0f95137907e2091 -DSection=debug -UMulti-Arch -UReplaces -UBreaks - install -m0755 -d debian/massxpert2-data/DEBIAN - echo misc:Depends= >> debian/massxpert2-data.substvars - echo misc:Pre-Depends= >> debian/massxpert2-data.substvars - dpkg-gencontrol -pmassxpert2-data -ldebian/changelog -Tdebian/massxpert2-data.substvars -cdebian/control -Pdebian/massxpert2-data chmod 0644 -- debian/massxpert-doc/DEBIAN/control chown 0:0 -- debian/massxpert-doc/DEBIAN/control chmod 0644 -- debian/massxpert/DEBIAN/control chown 0:0 -- debian/massxpert/DEBIAN/control - chmod 0644 -- debian/massxpert2-doc/DEBIAN/control - chown 0:0 -- debian/massxpert2-doc/DEBIAN/control - chmod 0644 -- debian/massxpert2-data/DEBIAN/control - chown 0:0 -- debian/massxpert2-data/DEBIAN/control chmod 0644 -- debian/.debhelper/massxpert2/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/massxpert2/dbgsym-root/DEBIAN/control dpkg-gencontrol -pmassxpert2 -ldebian/changelog -Tdebian/massxpert2.substvars -cdebian/control -Pdebian/massxpert2 + chmod 0644 -- debian/massxpert2-data/DEBIAN/control + chown 0:0 -- debian/massxpert2-data/DEBIAN/control + chmod 0644 -- debian/massxpert2-doc/DEBIAN/control + chown 0:0 -- debian/massxpert2-doc/DEBIAN/control chmod 0644 -- debian/massxpert2/DEBIAN/control chown 0:0 -- debian/massxpert2/DEBIAN/control dh_md5sums - install -m0755 -d debian/massxpert/DEBIAN install -m0755 -d debian/massxpert-doc/DEBIAN - install -m0755 -d debian/massxpert2/DEBIAN install -m0755 -d debian/massxpert2-doc/DEBIAN + install -m0755 -d debian/massxpert2/DEBIAN install -m0755 -d debian/massxpert2-data/DEBIAN - cd debian/massxpert >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + install -m0755 -d debian/massxpert/DEBIAN cd debian/massxpert-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + cd debian/massxpert >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/massxpert2-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - cd debian/massxpert2 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/massxpert2-data >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - chmod 0644 -- debian/massxpert/DEBIAN/md5sums - chown 0:0 -- debian/massxpert/DEBIAN/md5sums + cd debian/massxpert2 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/massxpert-doc/DEBIAN/md5sums chown 0:0 -- debian/massxpert-doc/DEBIAN/md5sums + chmod 0644 -- debian/massxpert/DEBIAN/md5sums + chown 0:0 -- debian/massxpert/DEBIAN/md5sums chmod 0644 -- debian/massxpert2/DEBIAN/md5sums chown 0:0 -- debian/massxpert2/DEBIAN/md5sums install -m0755 -d debian/.debhelper/massxpert2/dbgsym-root/DEBIAN @@ -10976,10 +11012,10 @@ dpkg-deb --build debian/massxpert2-data .. dpkg-deb --build debian/massxpert2-doc .. dpkg-deb: building package 'massxpert-doc' in '../massxpert-doc_8.5.0-1_all.deb'. -dpkg-deb: building package 'massxpert2-dbgsym' in '../massxpert2-dbgsym_8.5.0-1_arm64.deb'. +dpkg-deb: building package 'massxpert' in '../massxpert_8.5.0-1_all.deb'. dpkg-deb: building package 'massxpert2' in '../massxpert2_8.5.0-1_arm64.deb'. +dpkg-deb: building package 'massxpert2-dbgsym' in '../massxpert2-dbgsym_8.5.0-1_arm64.deb'. dpkg-deb: building package 'massxpert2-data' in '../massxpert2-data_8.5.0-1_all.deb'. -dpkg-deb: building package 'massxpert' in '../massxpert_8.5.0-1_all.deb'. dpkg-deb: building package 'massxpert2-doc' in '../massxpert2-doc_8.5.0-1_all.deb'. dpkg-genbuildinfo --build=binary -O../massxpert2_8.5.0-1_arm64.buildinfo dpkg-genchanges --build=binary -O../massxpert2_8.5.0-1_arm64.changes @@ -10988,12 +11024,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1584344/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1584344/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2754393 and its subdirectories -I: Current time: Mon Oct 6 14:59:06 -12 2025 -I: pbuilder-time-stamp: 1759805946 +I: removing directory /srv/workspace/pbuilder/1584344 and its subdirectories +I: Current time: Wed Sep 4 10:53:25 +14 2024 +I: pbuilder-time-stamp: 1725396805