Diff of the two buildlogs: -- --- b1/build.log 2024-11-30 05:57:25.341769010 +0000 +++ b2/build.log 2024-11-30 06:02:29.352059099 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri Jan 2 00:13:16 -12 2026 -I: pbuilder-time-stamp: 1767355996 +I: Current time: Sat Nov 30 19:57:28 +14 2024 +I: pbuilder-time-stamp: 1732946248 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -26,52 +26,84 @@ dpkg-source: info: unpacking libcifpp_7.0.7-3.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1890018/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3180215/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 30 05:57 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3180215/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3180215/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='c53ea7ec5d724b348636155cef93ca95' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1890018' - PS1='# ' - PS2='> ' + INVOCATION_ID=7566eea73b6348a095a0823159491e38 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3180215 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.LO43zWkW/pbuilderrc_VSNK --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.LO43zWkW/b1 --logfile b1/build.log libcifpp_7.0.7-3.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.LO43zWkW/pbuilderrc_wrUt --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.LO43zWkW/b2 --logfile b2/build.log libcifpp_7.0.7-3.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink01-arm64 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/1890018/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3180215/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -341,7 +373,7 @@ Get: 210 http://deb.debian.org/debian trixie/main arm64 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 211 http://deb.debian.org/debian trixie/main arm64 python3-sphinx-rtd-theme all 3.0.2+dfsg-1 [29.5 kB] Get: 212 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] -Fetched 156 MB in 1s (136 MB/s) +Fetched 156 MB in 1s (243 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20080 files and directories currently installed.) @@ -1039,8 +1071,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Fri Jan 2 12:14:22 UTC 2026. -Universal Time is now: Fri Jan 2 12:14:22 UTC 2026. +Local time is now: Sat Nov 30 05:58:02 UTC 2024. +Universal Time is now: Sat Nov 30 05:58:02 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... @@ -1232,7 +1264,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/libcifpp-7.0.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libcifpp_7.0.7-3_source.changes +I: user script /srv/workspace/pbuilder/3180215/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/3180215/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libcifpp-7.0.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libcifpp_7.0.7-3_source.changes dpkg-buildpackage: info: source package libcifpp dpkg-buildpackage: info: source version 7.0.7-3 dpkg-buildpackage: info: source distribution unstable @@ -1297,7 +1333,7 @@ -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot -- Found Sphinx: /usr/bin/sphinx-build --- Configuring done (12.8s) +-- Configuring done (11.3s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: @@ -1323,11 +1359,11 @@ make[3]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' make -f CMakeFiles/cifpp.dir/build.make CMakeFiles/cifpp.dir/depend make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -make -f docs/CMakeFiles/Doxygen-libcifpp.dir/build.make docs/CMakeFiles/Doxygen-libcifpp.dir/depend cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/CMakeFiles/cifpp.dir/DependInfo.cmake "--color=" -make -f docs/CMakeFiles/Sphinx-libcifpp.dir/build.make docs/CMakeFiles/Sphinx-libcifpp.dir/depend +make -f docs/CMakeFiles/Doxygen-libcifpp.dir/build.make docs/CMakeFiles/Doxygen-libcifpp.dir/depend make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/docs /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs/CMakeFiles/Doxygen-libcifpp.dir/DependInfo.cmake "--color=" +make -f docs/CMakeFiles/Sphinx-libcifpp.dir/build.make docs/CMakeFiles/Sphinx-libcifpp.dir/depend make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/docs /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs/CMakeFiles/Sphinx-libcifpp.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' @@ -1335,37 +1371,37 @@ make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' make -f docs/CMakeFiles/Doxygen-libcifpp.dir/build.make docs/CMakeFiles/Doxygen-libcifpp.dir/build -make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' make -f docs/CMakeFiles/Sphinx-libcifpp.dir/build.make docs/CMakeFiles/Sphinx-libcifpp.dir/build -[ 2%] Building CXX object CMakeFiles/cifpp.dir/src/category.cpp.o make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -[ 4%] Building CXX object CMakeFiles/cifpp.dir/src/condition.cpp.o +[ 2%] Building CXX object CMakeFiles/cifpp.dir/src/category.cpp.o /usr/bin/c++ -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-7.0.7/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/category.cpp.o -MF CMakeFiles/cifpp.dir/src/category.cpp.o.d -o CMakeFiles/cifpp.dir/src/category.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/src/category.cpp -[ 6%] Generating xml -/usr/bin/c++ -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-7.0.7/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/condition.cpp.o -MF CMakeFiles/cifpp.dir/src/condition.cpp.o.d -o CMakeFiles/cifpp.dir/src/condition.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/src/condition.cpp -[ 9%] Building CXX object CMakeFiles/cifpp.dir/src/datablock.cpp.o -[ 11%] Building CXX object CMakeFiles/cifpp.dir/src/dictionary_parser.cpp.o -[ 13%] Generating xml +[ 4%] Generating xml cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs && /usr/bin/cmake -E make_directory /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs/xml +[ 6%] Building CXX object CMakeFiles/cifpp.dir/src/condition.cpp.o +[ 9%] Generating xml +/usr/bin/c++ -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-7.0.7/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/condition.cpp.o -MF CMakeFiles/cifpp.dir/src/condition.cpp.o.d -o CMakeFiles/cifpp.dir/src/condition.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/src/condition.cpp cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs && /usr/bin/cmake -E make_directory /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs/xml +[ 11%] Building CXX object CMakeFiles/cifpp.dir/src/datablock.cpp.o /usr/bin/c++ -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-7.0.7/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/datablock.cpp.o -MF CMakeFiles/cifpp.dir/src/datablock.cpp.o.d -o CMakeFiles/cifpp.dir/src/datablock.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/src/datablock.cpp +[ 13%] Generating docs +cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs && /usr/bin/doxygen /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs/Doxyfile +[ 15%] Building CXX object CMakeFiles/cifpp.dir/src/dictionary_parser.cpp.o /usr/bin/c++ -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-7.0.7/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/dictionary_parser.cpp.o -MF CMakeFiles/cifpp.dir/src/dictionary_parser.cpp.o.d -o CMakeFiles/cifpp.dir/src/dictionary_parser.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/src/dictionary_parser.cpp -[ 15%] Building CXX object CMakeFiles/cifpp.dir/src/file.cpp.o [ 18%] Generating docs cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs && /usr/bin/doxygen /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs/Doxyfile +[ 20%] Building CXX object CMakeFiles/cifpp.dir/src/file.cpp.o /usr/bin/c++ -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-7.0.7/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/file.cpp.o -MF CMakeFiles/cifpp.dir/src/file.cpp.o.d -o CMakeFiles/cifpp.dir/src/file.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/src/file.cpp -[ 20%] Building CXX object CMakeFiles/cifpp.dir/src/item.cpp.o -[ 22%] Generating docs -cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs && /usr/bin/doxygen /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/docs/Doxyfile +[ 22%] Building CXX object CMakeFiles/cifpp.dir/src/item.cpp.o /usr/bin/c++ -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-7.0.7/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/item.cpp.o -MF CMakeFiles/cifpp.dir/src/item.cpp.o.d -o CMakeFiles/cifpp.dir/src/item.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/src/item.cpp [ 25%] Building CXX object CMakeFiles/cifpp.dir/src/parser.cpp.o /usr/bin/c++ -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-7.0.7/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/parser.cpp.o -MF CMakeFiles/cifpp.dir/src/parser.cpp.o.d -o CMakeFiles/cifpp.dir/src/parser.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/src/parser.cpp [ 27%] Building CXX object CMakeFiles/cifpp.dir/src/row.cpp.o [ 29%] Building CXX object CMakeFiles/cifpp.dir/src/validate.cpp.o /usr/bin/c++ -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-7.0.7/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/row.cpp.o -MF CMakeFiles/cifpp.dir/src/row.cpp.o.d -o CMakeFiles/cifpp.dir/src/row.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/src/row.cpp -[ 31%] Building CXX object CMakeFiles/cifpp.dir/src/text.cpp.o /usr/bin/c++ -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-7.0.7/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/validate.cpp.o -MF CMakeFiles/cifpp.dir/src/validate.cpp.o.d -o CMakeFiles/cifpp.dir/src/validate.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/src/validate.cpp +[ 31%] Building CXX object CMakeFiles/cifpp.dir/src/text.cpp.o /usr/bin/c++ -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-7.0.7/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/text.cpp.o -MF CMakeFiles/cifpp.dir/src/text.cpp.o.d -o CMakeFiles/cifpp.dir/src/text.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/src/text.cpp Doxygen version used: 1.9.8 Searching for include files... @@ -1579,6 +1615,10 @@ Generating code for file cif++/pdb/tls.hpp... Generating code for file c/build/reproducible-path/libcifpp-7.0.7/include/cif++/validate.hpp:161: warning: Member make_error_code(validation_error e) (function) of namespace cif is not documented. /build/reproducible-path/libcifpp-7.0.7/include/cif++/validate.hpp:166: warning: Member make_error_condition(validation_error e) (function) of namespace cif is not documented. +/build/reproducible-path/libcifpp-7.0.7/include/cif++/validate.hpp:161: warning: Member make_error_code(validation_error e) (function) of namespace cif is not documented. +/build/reproducible-path/libcifpp-7.0.7/include/cif++/validate.hpp:166: warning: Member make_error_condition(validation_error e) (function) of namespace cif is not documented. +/build/reproducible-path/libcifpp-7.0.7/include/cif++/category.hpp:975: warning: Member value_provider_type (typedef) of class cif::category is not documented. +/build/reproducible-path/libcifpp-7.0.7/include/cif++/category.hpp:153: warning: Member operator=(category rhs) (function) of class cif::category is not documented. 7/include/cif++/pdb/tls.hpp... Parsing file /build/reproducible-path/libcifpp-7.0.7/include/cif++/pdb/tls.hpp... Preprocessing /build/reproducible-path/libcifpp-7.0.7/include/cif++/point.hpp... @@ -1675,11 +1715,7 @@ Generating code for file cif++/pdb/io.hpp... Generating code for file cif++/pdb/pdb2cif.hpp... Generating code for file cif++/pdb/tls.hpp... -Generating code for file c/build/reproducible-path/libcifpp-7.0.7/include/cif++/validate.hpp:161: warning: Member make_error_code(validation_error e) (function) of namespace cif is not documented. -/build/reproducible-path/libcifpp-7.0.7/include/cif++/validate.hpp:166: warning: Member make_error_condition(validation_error e) (function) of namespace cif is not documented. -/build/reproducible-path/libcifpp-7.0.7/include/cif++/category.hpp:975: warning: Member value_provider_type (typedef) of class cif::category is not documented. -/build/reproducible-path/libcifpp-7.0.7/include/cif++/category.hpp:153: warning: Member operator=(category rhs) (function) of class cif::category is not documented. -/build/reproducible-path/libcifpp-7.0.7/include/cif++/category.hpp:164: warning: Member swap(category &a, category &b) noexcept (friend) of class cif::category is not documented. +Generating code for file c/build/reproducible-path/libcifpp-7.0.7/include/cif++/category.hpp:164: warning: Member swap(category &a, category &b) noexcept (friend) of class cif::category is not documented. /build/reproducible-path/libcifpp-7.0.7/include/cif++/compound.hpp:175: warning: Member one_letter_code() const (function) of class cif::compound is not documented. /build/reproducible-path/libcifpp-7.0.7/include/cif++/compound.hpp:274: warning: Member is_water(std::string_view res_name) const (function) of class cif::compound_factory is not documented. /build/reproducible-path/libcifpp-7.0.7/include/cif++/compound.hpp:292: warning: Member report_missing_compound(std::string_view compound_id) (function) of class cif::compound_factory is not documented. @@ -2288,9 +2324,9 @@ /usr/bin/c++ -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-7.0.7/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/pdb/validate-pdbx.cpp.o -MF CMakeFiles/cifpp.dir/src/pdb/validate-pdbx.cpp.o.d -o CMakeFiles/cifpp.dir/src/pdb/validate-pdbx.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/src/pdb/validate-pdbx.cpp (!) Unabridged API: unexpected kind 'concept' (IGNORED) [~] Exhale: parsing Doxygen XML. -[+] Exhale: finished parsing Doxygen XML in 6.8 seconds. +[+] Exhale: finished parsing Doxygen XML in 5.29 seconds. [~] Exhale: generating reStructuredText documents. -[+] Exhale: generated reStructuredText documents in 5.38 seconds. +[+] Exhale: generated reStructuredText documents in 5.46 seconds. myst v4.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions={'colon_fence'}, disable_syntax=[], all_links_external=False, links_external_new_tab=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=0, heading_slug_func=None, html_meta={}, footnote_sort=True, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True) building [mo]: targets for 0 po files that are out of date writing output... @@ -2354,6 +2390,25 @@ reading sources... [ 17%] api/classcif_1_1validation__category__impl reading sources... [ 17%] api/classcif_1_1validation__exception reading sources... [ 17%] api/classcif_1_1validator +In file included from /usr/include/c++/14/string:42, + from /usr/include/c++/14/stdexcept:39, + from /usr/include/c++/14/system_error:43, + from /usr/include/c++/14/bits/fs_fwd.h:35, + from /usr/include/c++/14/filesystem:51, + from /build/reproducible-path/libcifpp-7.0.7/include/cif++/utilities.hpp:31, + from /build/reproducible-path/libcifpp-7.0.7/include/cif++.hpp:29, + from /build/reproducible-path/libcifpp-7.0.7/src/pdb/reconstruct.cpp:27: +In static member function ‘static constexpr void std::char_traits::assign(char_type&, const char_type&)’, + inlined from ‘constexpr void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::push_back(_CharT) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]’ at /usr/include/c++/14/bits/basic_string.h:1577:21, + inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator+=(_CharT) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]’ at /usr/include/c++/14/bits/basic_string.h:1399:17, + inlined from ‘void cif::pdb::createEntityPoly(cif::datablock&)’ at /build/reproducible-path/libcifpp-7.0.7/src/pdb/reconstruct.cpp:845:29: +/usr/include/c++/14/bits/char_traits.h:350:14: warning: ‘letter_can’ may be used uninitialized [-Wmaybe-uninitialized] + 350 | __c1 = __c2; + | ~~~~~^~~~~~ +/build/reproducible-path/libcifpp-7.0.7/src/pdb/reconstruct.cpp: In function ‘void cif::pdb::createEntityPoly(cif::datablock&)’: +/build/reproducible-path/libcifpp-7.0.7/src/pdb/reconstruct.cpp:780:30: note: ‘letter_can’ was declared here + 780 | char letter_can; + | ^~~~~~~~~~ reading sources... [ 18%] api/classcif_1_1validator__factory reading sources... [ 18%] api/define_exports_8hpp_1a34c1ecdfe0e74030d387cc4e3db0f20d reading sources... [ 18%] api/define_exports_8hpp_1a42700069adcc34faeda32076bd173dc1 @@ -2512,25 +2567,6 @@ reading sources... [ 64%] api/function_namespacecif_1ae07f25a3d33d06b0128d157360949285 reading sources... [ 65%] api/function_namespacecif_1ae338b65793c18872e8bcdfe6a534c83b reading sources... [ 65%] api/function_namespacecif_1ae8f1330ded658c851bda5859f2e071bc -In file included from /usr/include/c++/14/string:42, - from /usr/include/c++/14/stdexcept:39, - from /usr/include/c++/14/system_error:43, - from /usr/include/c++/14/bits/fs_fwd.h:35, - from /usr/include/c++/14/filesystem:51, - from /build/reproducible-path/libcifpp-7.0.7/include/cif++/utilities.hpp:31, - from /build/reproducible-path/libcifpp-7.0.7/include/cif++.hpp:29, - from /build/reproducible-path/libcifpp-7.0.7/src/pdb/reconstruct.cpp:27: -In static member function ‘static constexpr void std::char_traits::assign(char_type&, const char_type&)’, - inlined from ‘constexpr void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::push_back(_CharT) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]’ at /usr/include/c++/14/bits/basic_string.h:1577:21, - inlined from ‘constexpr std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator+=(_CharT) [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]’ at /usr/include/c++/14/bits/basic_string.h:1399:17, - inlined from ‘void cif::pdb::createEntityPoly(cif::datablock&)’ at /build/reproducible-path/libcifpp-7.0.7/src/pdb/reconstruct.cpp:845:29: -/usr/include/c++/14/bits/char_traits.h:350:14: warning: ‘letter_can’ may be used uninitialized [-Wmaybe-uninitialized] - 350 | __c1 = __c2; - | ~~~~~^~~~~~ -/build/reproducible-path/libcifpp-7.0.7/src/pdb/reconstruct.cpp: In function ‘void cif::pdb::createEntityPoly(cif::datablock&)’: -/build/reproducible-path/libcifpp-7.0.7/src/pdb/reconstruct.cpp:780:30: note: ‘letter_can’ was declared here - 780 | char letter_can; - | ^~~~~~~~~~ reading sources... [ 65%] api/function_namespacecif_1aeb2069c34c7d86acc4418d3740adf5d8 reading sources... [ 66%] api/function_namespacecif_1aef6733cba9b16b7930e84b8f578da630 reading sources... [ 66%] api/function_namespacecif_1af443771f125de0bdc78726a4235fc1a3 @@ -2620,7 +2656,35 @@ reading sources... [ 91%] api/typedef_namespacecif_1a35974aa02359ef095b68335a05849c53 reading sources... [ 92%] api/typedef_namespacecif_1a5ae3b948c3296e47bf3ae734cfdca029 reading sources... [ 92%] api/typedef_namespacecif_1a74bfe90596358d194adfab0eb0054b79 -reading sources... [ 92%] api/typedef_namespacecif_1a88b677fc53a3f1e8e0f15cdb6dc52cb7 +In file included from /usr/include/eigen3/Eigen/Core:341, + from /usr/include/eigen3/Eigen/Eigenvalues:11, + from /build/reproducible-path/libcifpp-7.0.7/src/symmetry.cpp:35: +/usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h: In function ‘static void Eigen::internal::trmv_selector::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose, -1, -1, false>, -1, -1, false> >; Rhs = Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >; Dest = Eigen::Transpose, 1, -1, true>, 1, -1, false> >; int Mode = 6]’: +/usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h:332:12: warning: ‘result’ may be used uninitialized [-Wmaybe-uninitialized] + 327 | internal::triangular_matrix_vector_product + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 328 | + | ~~~~~~~~~ + 332 | ::run(actualLhs.rows(),actualLhs.cols(), + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 333 | actualLhs.data(),actualLhs.outerStride(), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 334 | actualRhsPtr,1, + | ~~~~~~~~~~~~~~~ + 335 | dest.data(),dest.innerStride(), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 336 | actualAlpha); + | ~~~~~~~~~~~~ +reading sources... [ 92%] /usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h:105:24: note: by argument 5 of type ‘const float*’ to ‘static void Eigen::internal::triangular_matrix_vector_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, const ResScalar&) [with Index = long int; int Mode = 6; LhsScalar = float; bool ConjLhs = false; RhsScalar = float; bool ConjRhs = false; int Version = 0]’ declared here + 105 | EIGEN_DONT_INLINE void triangular_matrix_vector_product + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +api/typedef_namespacecif_1a88b677fc53a3f1e8e0f15cdb6dc52cb7 reading sources... [ 92%] api/typedef_namespacecif_1a8dcfa853b7f2c8b6dcc921d0c646ab46 reading sources... [ 93%] api/typedef_namespacecif_1aaca06426423d3d411d330b53965e1b2d reading sources... [ 93%] api/typedef_namespacecif_1ab059fcaf3572f71d81e93484789bc0e0 @@ -2728,34 +2792,6 @@ writing output... [ 1%] api/classcif_1_1category writing output... [ 1%] api/classcif_1_1cell writing output... [ 1%] api/classcif_1_1compound -In file included from /usr/include/eigen3/Eigen/Core:341, - from /usr/include/eigen3/Eigen/Eigenvalues:11, - from /build/reproducible-path/libcifpp-7.0.7/src/symmetry.cpp:35: -/usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h: In function ‘static void Eigen::internal::trmv_selector::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose, -1, -1, false>, -1, -1, false> >; Rhs = Eigen::Transpose, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Transpose, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >; Dest = Eigen::Transpose, 1, -1, true>, 1, -1, false> >; int Mode = 6]’: -/usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h:332:12: warning: ‘result’ may be used uninitialized [-Wmaybe-uninitialized] - 327 | internal::triangular_matrix_vector_product - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 328 | - | ~~~~~~~~~ - 332 | ::run(actualLhs.rows(),actualLhs.cols(), - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 333 | actualLhs.data(),actualLhs.outerStride(), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 334 | actualRhsPtr,1, - | ~~~~~~~~~~~~~~~ - 335 | dest.data(),dest.innerStride(), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 336 | actualAlpha); - | ~~~~~~~~~~~~ -/usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h:105:24: note: by argument 5 of type ‘const float*’ to ‘static void Eigen::internal::triangular_matrix_vector_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, const ResScalar&) [with Index = long int; int Mode = 6; LhsScalar = float; bool ConjLhs = false; RhsScalar = float; bool ConjRhs = false; int Version = 0]’ declared here - 105 | EIGEN_DONT_INLINE void triangular_matrix_vector_product - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ writing output... [ 2%] api/classcif_1_1compound__factory writing output... [ 2%] api/classcif_1_1compound__source writing output... [ 2%] api/classcif_1_1condition @@ -3122,68 +3158,68 @@ make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' [ 63%] Built target test-main make -f test/CMakeFiles/unit-v2-test.dir/build.make test/CMakeFiles/unit-v2-test.dir/depend -make -f test/CMakeFiles/unit-3d-test.dir/build.make test/CMakeFiles/unit-3d-test.dir/depend make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +make -f test/CMakeFiles/unit-3d-test.dir/build.make test/CMakeFiles/unit-3d-test.dir/depend cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/CMakeFiles/unit-v2-test.dir/DependInfo.cmake "--color=" -make -f test/CMakeFiles/format-test.dir/build.make test/CMakeFiles/format-test.dir/depend -make -f test/CMakeFiles/model-test.dir/build.make test/CMakeFiles/model-test.dir/depend make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +make -f test/CMakeFiles/format-test.dir/build.make test/CMakeFiles/format-test.dir/depend cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/CMakeFiles/unit-3d-test.dir/DependInfo.cmake "--color=" -make -f test/CMakeFiles/rename-compound-test.dir/build.make test/CMakeFiles/rename-compound-test.dir/depend make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +make -f test/CMakeFiles/model-test.dir/build.make test/CMakeFiles/model-test.dir/depend cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/CMakeFiles/format-test.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -make -f test/CMakeFiles/unit-v2-test.dir/build.make test/CMakeFiles/unit-v2-test.dir/build +make -f test/CMakeFiles/unit-3d-test.dir/build.make test/CMakeFiles/unit-3d-test.dir/build make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/CMakeFiles/model-test.dir/DependInfo.cmake "--color=" -make -f test/CMakeFiles/sugar-test.dir/build.make test/CMakeFiles/sugar-test.dir/depend -make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/CMakeFiles/rename-compound-test.dir/DependInfo.cmake "--color=" -make -f test/CMakeFiles/spinner-test.dir/build.make test/CMakeFiles/spinner-test.dir/depend make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -make -f test/CMakeFiles/unit-3d-test.dir/build.make test/CMakeFiles/unit-3d-test.dir/build -cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/CMakeFiles/sugar-test.dir/DependInfo.cmake "--color=" +make -f test/CMakeFiles/rename-compound-test.dir/build.make test/CMakeFiles/rename-compound-test.dir/depend make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -make -f test/CMakeFiles/format-test.dir/build.make test/CMakeFiles/format-test.dir/build +cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/CMakeFiles/rename-compound-test.dir/DependInfo.cmake "--color=" +make -f test/CMakeFiles/unit-v2-test.dir/build.make test/CMakeFiles/unit-v2-test.dir/build make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/CMakeFiles/spinner-test.dir/DependInfo.cmake "--color=" -make -f test/CMakeFiles/validate-pdbx-test.dir/build.make test/CMakeFiles/validate-pdbx-test.dir/depend +make -f test/CMakeFiles/format-test.dir/build.make test/CMakeFiles/format-test.dir/build make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +make -f test/CMakeFiles/sugar-test.dir/build.make test/CMakeFiles/sugar-test.dir/depend make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -[ 65%] Building CXX object test/CMakeFiles/unit-v2-test.dir/unit-v2-test.cpp.o +[ 65%] Building CXX object test/CMakeFiles/format-test.dir/format-test.cpp.o make -f test/CMakeFiles/model-test.dir/build.make test/CMakeFiles/model-test.dir/build -cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DCATCH22=0 -DDATA_DIR=\"/usr/share/libcifpp\" -I/usr/include/eigen3 -I/build/reproducible-path/libcifpp-7.0.7/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT test/CMakeFiles/unit-v2-test.dir/unit-v2-test.cpp.o -MF CMakeFiles/unit-v2-test.dir/unit-v2-test.cpp.o.d -o CMakeFiles/unit-v2-test.dir/unit-v2-test.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/test/unit-v2-test.cpp -make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/CMakeFiles/validate-pdbx-test.dir/DependInfo.cmake "--color=" -make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -[ 68%] Building CXX object test/CMakeFiles/format-test.dir/format-test.cpp.o +[ 68%] Building CXX object test/CMakeFiles/unit-3d-test.dir/unit-3d-test.cpp.o make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/CMakeFiles/sugar-test.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DCATCH22=0 -DDATA_DIR=\"/usr/share/libcifpp\" -I/usr/include/eigen3 -I/build/reproducible-path/libcifpp-7.0.7/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT test/CMakeFiles/format-test.dir/format-test.cpp.o -MF CMakeFiles/format-test.dir/format-test.cpp.o.d -o CMakeFiles/format-test.dir/format-test.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/test/format-test.cpp make -f test/CMakeFiles/rename-compound-test.dir/build.make test/CMakeFiles/rename-compound-test.dir/build -[ 70%] Building CXX object test/CMakeFiles/unit-3d-test.dir/unit-3d-test.cpp.o make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DCATCH22=0 -DDATA_DIR=\"/usr/share/libcifpp\" -I/usr/include/eigen3 -I/build/reproducible-path/libcifpp-7.0.7/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT test/CMakeFiles/format-test.dir/format-test.cpp.o -MF CMakeFiles/format-test.dir/format-test.cpp.o.d -o CMakeFiles/format-test.dir/format-test.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/test/format-test.cpp -make -f test/CMakeFiles/sugar-test.dir/build.make test/CMakeFiles/sugar-test.dir/build -make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DCATCH22=0 -DDATA_DIR=\"/usr/share/libcifpp\" -I/usr/include/eigen3 -I/build/reproducible-path/libcifpp-7.0.7/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT test/CMakeFiles/unit-3d-test.dir/unit-3d-test.cpp.o -MF CMakeFiles/unit-3d-test.dir/unit-3d-test.cpp.o.d -o CMakeFiles/unit-3d-test.dir/unit-3d-test.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/test/unit-3d-test.cpp +make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +make -f test/CMakeFiles/spinner-test.dir/build.make test/CMakeFiles/spinner-test.dir/depend make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +make -f test/CMakeFiles/sugar-test.dir/build.make test/CMakeFiles/sugar-test.dir/build make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -make -f test/CMakeFiles/spinner-test.dir/build.make test/CMakeFiles/spinner-test.dir/build -[ 72%] Building CXX object test/CMakeFiles/model-test.dir/model-test.cpp.o +cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/CMakeFiles/spinner-test.dir/DependInfo.cmake "--color=" +[ 70%] Building CXX object test/CMakeFiles/model-test.dir/model-test.cpp.o +[ 72%] Building CXX object test/CMakeFiles/unit-v2-test.dir/unit-v2-test.cpp.o +cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DCATCH22=0 -DDATA_DIR=\"/usr/share/libcifpp\" -I/usr/include/eigen3 -I/build/reproducible-path/libcifpp-7.0.7/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT test/CMakeFiles/unit-v2-test.dir/unit-v2-test.cpp.o -MF CMakeFiles/unit-v2-test.dir/unit-v2-test.cpp.o.d -o CMakeFiles/unit-v2-test.dir/unit-v2-test.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/test/unit-v2-test.cpp +make -f test/CMakeFiles/validate-pdbx-test.dir/build.make test/CMakeFiles/validate-pdbx-test.dir/depend make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -make -f test/CMakeFiles/validate-pdbx-test.dir/build.make test/CMakeFiles/validate-pdbx-test.dir/build cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DCATCH22=0 -DDATA_DIR=\"/usr/share/libcifpp\" -I/usr/include/eigen3 -I/build/reproducible-path/libcifpp-7.0.7/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT test/CMakeFiles/model-test.dir/model-test.cpp.o -MF CMakeFiles/model-test.dir/model-test.cpp.o.d -o CMakeFiles/model-test.dir/model-test.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/test/model-test.cpp [ 75%] Building CXX object test/CMakeFiles/rename-compound-test.dir/rename-compound-test.cpp.o cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DCATCH22=0 -DDATA_DIR=\"/usr/share/libcifpp\" -I/usr/include/eigen3 -I/build/reproducible-path/libcifpp-7.0.7/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT test/CMakeFiles/rename-compound-test.dir/rename-compound-test.cpp.o -MF CMakeFiles/rename-compound-test.dir/rename-compound-test.cpp.o.d -o CMakeFiles/rename-compound-test.dir/rename-compound-test.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/test/rename-compound-test.cpp make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-7.0.7 /build/reproducible-path/libcifpp-7.0.7/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/CMakeFiles/validate-pdbx-test.dir/DependInfo.cmake "--color=" +make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +make -f test/CMakeFiles/spinner-test.dir/build.make test/CMakeFiles/spinner-test.dir/build [ 77%] Building CXX object test/CMakeFiles/sugar-test.dir/sugar-test.cpp.o cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DCATCH22=0 -DDATA_DIR=\"/usr/share/libcifpp\" -I/usr/include/eigen3 -I/build/reproducible-path/libcifpp-7.0.7/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT test/CMakeFiles/sugar-test.dir/sugar-test.cpp.o -MF CMakeFiles/sugar-test.dir/sugar-test.cpp.o.d -o CMakeFiles/sugar-test.dir/sugar-test.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/test/sugar-test.cpp -[ 81%] Building CXX object test/CMakeFiles/validate-pdbx-test.dir/validate-pdbx-test.cpp.o +make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +make -f test/CMakeFiles/validate-pdbx-test.dir/build.make test/CMakeFiles/validate-pdbx-test.dir/build +make[4]: Entering directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' [ 79%] Building CXX object test/CMakeFiles/spinner-test.dir/spinner-test.cpp.o cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DCATCH22=0 -DDATA_DIR=\"/usr/share/libcifpp\" -I/usr/include/eigen3 -I/build/reproducible-path/libcifpp-7.0.7/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT test/CMakeFiles/spinner-test.dir/spinner-test.cpp.o -MF CMakeFiles/spinner-test.dir/spinner-test.cpp.o.d -o CMakeFiles/spinner-test.dir/spinner-test.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/test/spinner-test.cpp +[ 81%] Building CXX object test/CMakeFiles/validate-pdbx-test.dir/validate-pdbx-test.cpp.o cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DCATCH22=0 -DDATA_DIR=\"/usr/share/libcifpp\" -I/usr/include/eigen3 -I/build/reproducible-path/libcifpp-7.0.7/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT test/CMakeFiles/validate-pdbx-test.dir/validate-pdbx-test.cpp.o -MF CMakeFiles/validate-pdbx-test.dir/validate-pdbx-test.cpp.o.d -o CMakeFiles/validate-pdbx-test.dir/validate-pdbx-test.cpp.o -c /build/reproducible-path/libcifpp-7.0.7/test/validate-pdbx-test.cpp [ 84%] Linking CXX executable spinner-test cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/spinner-test.dir/link.txt --verbose=1 @@ -3195,16 +3231,16 @@ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/format-test.dir/format-test.cpp.o" "CMakeFiles/test-main.dir/test-main.cpp.o" -o format-test -Wl,-rpath,/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu ../libcifpp.so.7.0.7 /usr/lib/libCatch2.a /usr/lib/aarch64-linux-gnu/libz.so make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' [ 86%] Built target format-test -[ 88%] Linking CXX executable sugar-test -cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/sugar-test.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/sugar-test.dir/sugar-test.cpp.o" "CMakeFiles/test-main.dir/test-main.cpp.o" -o sugar-test -Wl,-rpath,/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu ../libcifpp.so.7.0.7 /usr/lib/libCatch2.a /usr/lib/aarch64-linux-gnu/libz.so -make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -[ 88%] Built target sugar-test -[ 90%] Linking CXX executable rename-compound-test +[ 88%] Linking CXX executable rename-compound-test cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/rename-compound-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/rename-compound-test.dir/rename-compound-test.cpp.o" "CMakeFiles/test-main.dir/test-main.cpp.o" -o rename-compound-test -Wl,-rpath,/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu ../libcifpp.so.7.0.7 /usr/lib/libCatch2.a /usr/lib/aarch64-linux-gnu/libz.so make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -[ 90%] Built target rename-compound-test +[ 88%] Built target rename-compound-test +[ 90%] Linking CXX executable sugar-test +cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/sugar-test.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/sugar-test.dir/sugar-test.cpp.o" "CMakeFiles/test-main.dir/test-main.cpp.o" -o sugar-test -Wl,-rpath,/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu ../libcifpp.so.7.0.7 /usr/lib/libCatch2.a /usr/lib/aarch64-linux-gnu/libz.so +make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +[ 90%] Built target sugar-test [ 93%] Linking CXX executable validate-pdbx-test cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/validate-pdbx-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/validate-pdbx-test.dir/validate-pdbx-test.cpp.o" "CMakeFiles/test-main.dir/test-main.cpp.o" -o validate-pdbx-test -Wl,-rpath,/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu ../libcifpp.so.7.0.7 /usr/lib/libCatch2.a /usr/lib/aarch64-linux-gnu/libz.so @@ -3215,11 +3251,6 @@ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/model-test.dir/model-test.cpp.o" "CMakeFiles/test-main.dir/test-main.cpp.o" -o model-test -Wl,-rpath,/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu ../libcifpp.so.7.0.7 /usr/lib/libCatch2.a /usr/lib/aarch64-linux-gnu/libz.so make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' [ 95%] Built target model-test -[ 97%] Linking CXX executable unit-v2-test -cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit-v2-test.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/unit-v2-test.dir/unit-v2-test.cpp.o" "CMakeFiles/test-main.dir/test-main.cpp.o" -o unit-v2-test -Wl,-rpath,/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu ../libcifpp.so.7.0.7 /usr/lib/libCatch2.a /usr/lib/aarch64-linux-gnu/libz.so -make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' -[ 97%] Built target unit-v2-test In file included from /usr/include/eigen3/Eigen/Core:341, from /usr/include/eigen3/Eigen/Eigenvalues:11, from /build/reproducible-path/libcifpp-7.0.7/test/unit-3d-test.cpp:33: @@ -3248,6 +3279,11 @@ /usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h:105:24: note: by argument 5 of type ‘const float*’ to ‘static void Eigen::internal::triangular_matrix_vector_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, const ResScalar&) [with Index = long int; int Mode = 6; LhsScalar = float; bool ConjLhs = false; RhsScalar = float; bool ConjRhs = false; int Version = 0]’ declared here 105 | EIGEN_DONT_INLINE void triangular_matrix_vector_product | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 97%] Linking CXX executable unit-v2-test +cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit-v2-test.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/unit-v2-test.dir/unit-v2-test.cpp.o" "CMakeFiles/test-main.dir/test-main.cpp.o" -o unit-v2-test -Wl,-rpath,/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu ../libcifpp.so.7.0.7 /usr/lib/libCatch2.a /usr/lib/aarch64-linux-gnu/libz.so +make[4]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' +[ 97%] Built target unit-v2-test [100%] Linking CXX executable unit-3d-test cd /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit-3d-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-7.0.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/unit-3d-test.dir/unit-3d-test.cpp.o" "CMakeFiles/test-main.dir/test-main.cpp.o" -o unit-3d-test -Wl,-rpath,/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu ../libcifpp.so.7.0.7 /usr/lib/libCatch2.a /usr/lib/aarch64-linux-gnu/libz.so @@ -3321,10 +3357,7 @@ 8: Test command: /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test/validate-pdbx-test "--data-dir" "/build/reproducible-path/libcifpp-7.0.7/test" 8: Working Directory: /build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu/test 8: Test timeout computed to be: 1500 -1: Randomness seeded to: 238407944 -1: warning: no child to parent links were found for child cat_1 and parent cat_3 -1: Error parsing mmCIF: This file does not seem to be an mmCIF file -3: Randomness seeded to: 4153454912 +3: Randomness seeded to: 174148850 3: Hello, world! 3: Hello, world! 3: Hello, world! @@ -3335,11 +3368,14 @@ 3: =============================================================================== 3: All tests passed (2 assertions in 2 test cases) 3: -1/8 Test #3: format-test ...................... Passed 0.10 sec -5: Randomness seeded to: 3930969577 +1/8 Test #3: format-test ...................... Passed 0.13 sec +1: Randomness seeded to: 4022930780 +1: warning: no child to parent links were found for child cat_1 and parent cat_3 +1: Error parsing mmCIF: This file does not seem to be an mmCIF file +5: Randomness seeded to: 670747788 5: inconsistent mandatory value for _diffrn_refln.standard_code in dictionary 5: choosing N -4: Randomness seeded to: 4250716571 +4: Randomness seeded to: 3473405721 4: Warning: no atoms loaded 4: Warning: no atoms loaded 5: inconsistent mandatory value for _diffrn_refln.frame_id in dictionary @@ -4112,52 +4148,6 @@ 5: A 1 88 GLU 88 88 88 GLU GLU A . n 5: A 1 89 SER 89 89 89 SER SER A . n 5: A 1 90 GLU 90 90 90 GLU GLU A . n -8: Randomness seeded to: 1558908093 -8: =============================================================================== -8: All tests passed (15 assertions in 1 test case) -8: -1: Adding mandatory item conn_type_id to category struct_conn -1: Adding mandatory item ptnr1_label_asym_id to category struct_conn -1: Adding mandatory item ptnr1_label_comp_id to category struct_conn -1: Adding mandatory item ptnr1_label_seq_id to category struct_conn -1: Adding mandatory item ptnr2_label_asym_id to category struct_conn -1: Adding mandatory item ptnr2_label_comp_id to category struct_conn -1: Adding mandatory item ptnr2_label_seq_id to category struct_conn -1: The asym ID's of ndb_poly_seq_scheme and pdbx_poly_seq_scheme are not equal, dropping ndb_poly_seq_scheme -1: -1: Configuration error: -1: -1: The attempt to retrieve compound information for "&&&" failed. -1: -1: This information is searched for in a CCD file called components.cif or -1: components.cif.gz which should be located in one of the following directories: -1: -1: -1: (Note that you can add a directory to the search paths by setting the -1: LIBCIFPP_DATA_DIR environmental variable) -1: -1: On Linux an optional cron script might have been installed that automatically updates -1: components.cif and mmCIF dictionary files. This script only works when the file -1: libcifpp.conf contains an uncommented line with the text: -1: -1: update=true -1: -1: If you do not have a working cron script, you can manually update the files -1: in /var/cache/libcifpp using the following commands: -1: -1: curl -o /var/cache/libcifpp/components.cif https://files.wwpdb.org/pub/pdb/data/monomers/components.cif -1: curl -o /var/cache/libcifpp/mmcif_pdbx.dic https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic -1: curl -o /var/cache/libcifpp/mmcif_ma.dic https://github.com/ihmwg/ModelCIF/raw/master/dist/mmcif_ma.dic -1: -1: The current order of compound factory objects is: -1: -1: CCD components file: "/build/reproducible-path/libcifpp-7.0.7/test/REA_v2.cif" -1: CCD components file: "/build/reproducible-path/libcifpp-7.0.7/test/HEM.cif" -1: CCD components.cif resource -1: -1: The following named resources were loaded: -1: components.cif -> "/build/reproducible-path/libcifpp-7.0.7/test/../rsrc/ccd-subset.cif" -1: mmcif_pdbx.dic -> "/build/reproducible-path/libcifpp-7.0.7/test/../rsrc/mmcif_pdbx.dic" 5: A 1 91 ASN 91 91 91 ASN ASN A . n 5: A 1 92 LYS 92 92 92 LYS LYS A . n 5: A 1 93 MET 93 93 93 MET MET A . n @@ -5709,6 +5699,53 @@ 5: _pdbx_struct_sheet_hbond.range_2_auth_seq_id 5: A 1 2 O PHE A 65 ? O PHE A 65 N PHE A 50 ? N PHE A 50 5: A 2 3 N SER A 55 ? N SER A 55 O ALA A 40 ? O ALA A 40 +1: Adding mandatory item conn_type_id to category struct_conn +1: Adding mandatory item ptnr1_label_asym_id to category struct_conn +1: Adding mandatory item ptnr1_label_comp_id to category struct_conn +1: Adding mandatory item ptnr1_label_seq_id to category struct_conn +1: Adding mandatory item ptnr2_label_asym_id to category struct_conn +1: Adding mandatory item ptnr2_label_comp_id to category struct_conn +1: Adding mandatory item ptnr2_label_seq_id to category struct_conn +1: The asym ID's of ndb_poly_seq_scheme and pdbx_poly_seq_scheme are not equal, dropping ndb_poly_seq_scheme +1: +1: Configuration error: +1: +1: The attempt to retrieve compound information for "&&&" failed. +1: +1: This information is searched for in a CCD file called components.cif or +1: components.cif.gz which should be located in one of the following directories: +1: +1: +1: (Note that you can add a directory to the search paths by setting the +1: LIBCIFPP_DATA_DIR environmental variable) +1: +1: On Linux an optional cron script might have been installed that automatically updates +1: components.cif and mmCIF dictionary files. This script only works when the file +1: libcifpp.conf contains an uncommented line with the text: +1: +1: update=true +1: +1: If you do not have a working cron script, you can manually update the files +1: in /var/cache/libcifpp using the following commands: +1: +1: curl -o /var/cache/libcifpp/components.cif https://files.wwpdb.org/pub/pdb/data/monomers/components.cif +1: curl -o /var/cache/libcifpp/mmcif_pdbx.dic https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic +1: curl -o /var/cache/libcifpp/mmcif_ma.dic https://github.com/ihmwg/ModelCIF/raw/master/dist/mmcif_ma.dic +1: +1: The current order of compound factory objects is: +1: +1: CCD components file: "/build/reproducible-path/libcifpp-7.0.7/test/REA_v2.cif" +1: CCD components file: "/build/reproducible-path/libcifpp-7.0.7/test/HEM.cif" +1: CCD components.cif resource +1: +1: The following named resources were loaded: +1: components.cif -> "/build/reproducible-path/libcifpp-7.0.7/test/../rsrc/ccd-subset.cif" +1: mmcif_pdbx.dic -> "/build/reproducible-path/libcifpp-7.0.7/test/../rsrc/mmcif_pdbx.dic" +8: Randomness seeded to: 1179842900 +8: =============================================================================== +8: All tests passed (15 assertions in 1 test case) +8: +2/8 Test #8: validate-pdbx-test ............... Passed 0.32 sec 5: A 3 4 N ILE A 43 ? N ILE A 43 O GLY A 5 ? O GLY A 5 5: A 4 5 N GLU A 13 ? N GLU A 13 O THR A 131 ? O THR A 131 5: A 5 6 N TYR A 134 ? N TYR A 134 O LEU A 119 ? O LEU A 119 @@ -5721,8 +5758,7 @@ 4: =============================================================================== 4: All tests passed (8500 assertions in 6 test cases) 4: -2/8 Test #4: model-test ....................... Passed 0.35 sec -3/8 Test #8: validate-pdbx-test ............... Passed 0.29 sec +3/8 Test #4: model-test ....................... Passed 0.44 sec 5: data_1CBS 5: # 5: _entry.id 1CBS @@ -8056,8 +8092,8 @@ 5: test cases: 1 | 1 passed 5: assertions: - none - 5: +4/8 Test #5: rename-compound-test ............. Passed 0.51 sec 1: Choosing X-PLOR version '' as refinement program. Score = 1 -4/8 Test #5: rename-compound-test ............. Passed 0.43 sec 1: Adding mandatory item value to category pdbx_struct_assembly_prop 1: Adding mandatory item conn_type_id to category struct_conn 1: Adding mandatory item ptnr1_label_asym_id to category struct_conn @@ -8070,30 +8106,30 @@ 1: =============================================================================== 1: All tests passed (100465 assertions in 51 test cases) 1: -5/8 Test #1: unit-v2-test ..................... Passed 0.63 sec -2: Randomness seeded to: 3300152085 +5/8 Test #1: unit-v2-test ..................... Passed 0.70 sec +2: Randomness seeded to: 2472720105 2: (1.70711,1.70711,0) 2: =============================================================================== 2: All tests passed (5099624 assertions in 15 test cases) 2: -6/8 Test #2: unit-3d-test ..................... Passed 1.51 sec -6: Randomness seeded to: 3516102062 -6: =============================================================================== -6: All tests passed (10 assertions in 2 test cases) -6: -7/8 Test #6: sugar-test ....................... Passed 4.71 sec -7: Randomness seeded to: 3653937125 +6/8 Test #2: unit-3d-test ..................... Passed 2.72 sec +7: Randomness seeded to: 24175554 7: =============================================================================== 7: test cases: 3 | 3 passed 7: assertions: - none - 7: -8/8 Test #7: spinner-test ..................... Passed 6.16 sec +7/8 Test #7: spinner-test ..................... Passed 5.08 sec +6: Randomness seeded to: 3220626166 +6: =============================================================================== +6: All tests passed (10 assertions in 2 test cases) +6: +8/8 Test #6: sugar-test ....................... Passed 13.02 sec 100% tests passed, 0 tests failed out of 8 -Total Test time (real) = 6.27 sec +Total Test time (real) = 13.14 sec make[1]: Leaving directory '/build/reproducible-path/libcifpp-7.0.7/obj-aarch64-linux-gnu' - rm -fr -- /tmp/dh-xdg-rundir-oKzmMr5j + rm -fr -- /tmp/dh-xdg-rundir-wGPuIHDY create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/libcifpp-dev.substvars debian/libcifpp-doc.substvars debian/libcifpp7.substvars debian/libcifpp-data.substvars @@ -8891,18 +8927,18 @@ install -m0755 -d debian/libcifpp-data/usr/share/doc/libcifpp-data install -p -m0644 debian/copyright debian/libcifpp-data/usr/share/doc/libcifpp-data/copyright dh_installchangelogs - install -m0755 -d debian/libcifpp-doc/usr/share/doc/libcifpp-doc - install -p -m0644 debian/.debhelper/generated/libcifpp-doc/dh_installchangelogs.dch.trimmed debian/libcifpp-doc/usr/share/doc/libcifpp-doc/changelog.Debian - install -p -m0644 ./changelog debian/libcifpp-doc/usr/share/doc/libcifpp-doc/changelog install -m0755 -d debian/libcifpp-dev/usr/share/doc/libcifpp-dev install -p -m0644 debian/.debhelper/generated/libcifpp-dev/dh_installchangelogs.dch.trimmed debian/libcifpp-dev/usr/share/doc/libcifpp-dev/changelog.Debian install -p -m0644 ./changelog debian/libcifpp-dev/usr/share/doc/libcifpp-dev/changelog - install -m0755 -d debian/libcifpp-data/usr/share/doc/libcifpp-data - install -p -m0644 debian/.debhelper/generated/libcifpp-data/dh_installchangelogs.dch.trimmed debian/libcifpp-data/usr/share/doc/libcifpp-data/changelog.Debian - install -p -m0644 ./changelog debian/libcifpp-data/usr/share/doc/libcifpp-data/changelog + install -m0755 -d debian/libcifpp-doc/usr/share/doc/libcifpp-doc + install -p -m0644 debian/.debhelper/generated/libcifpp-doc/dh_installchangelogs.dch.trimmed debian/libcifpp-doc/usr/share/doc/libcifpp-doc/changelog.Debian + install -p -m0644 ./changelog debian/libcifpp-doc/usr/share/doc/libcifpp-doc/changelog install -m0755 -d debian/libcifpp7/usr/share/doc/libcifpp7 install -p -m0644 debian/.debhelper/generated/libcifpp7/dh_installchangelogs.dch.trimmed debian/libcifpp7/usr/share/doc/libcifpp7/changelog.Debian install -p -m0644 ./changelog debian/libcifpp7/usr/share/doc/libcifpp7/changelog + install -m0755 -d debian/libcifpp-data/usr/share/doc/libcifpp-data + install -p -m0644 debian/.debhelper/generated/libcifpp-data/dh_installchangelogs.dch.trimmed debian/libcifpp-data/usr/share/doc/libcifpp-data/changelog.Debian + install -p -m0644 ./changelog debian/libcifpp-data/usr/share/doc/libcifpp-data/changelog dh_installexamples install -m0755 -d debian/libcifpp-dev/usr/share/doc/libcifpp-dev/examples cp --reflink=auto -a ./examples/1cbs.cif.gz debian/libcifpp-dev/usr/share/doc/libcifpp-dev/examples @@ -8929,45 +8965,45 @@ Using 1730185215 as canonical time Normalizing debian/libcifpp-dev/usr/share/doc/libcifpp-dev/examples/1cbs.cif.gz using File::StripNondeterminism::handlers::gzip Using 1730185215 as canonical time + Normalizing debian/libcifpp-doc/usr/share/doc/libcifpp/_static/minus.png using File::StripNondeterminism::handlers::png Normalizing debian/libcifpp-doc/usr/share/doc/libcifpp/_static/plus.png using File::StripNondeterminism::handlers::png Normalizing debian/libcifpp-doc/usr/share/doc/libcifpp/_static/file.png using File::StripNondeterminism::handlers::png - Normalizing debian/libcifpp-doc/usr/share/doc/libcifpp/_static/minus.png using File::StripNondeterminism::handlers::png dh_compress - cd debian/libcifpp-dev cd debian/libcifpp7 cd debian/libcifpp-data + cd debian/libcifpp-dev cd debian/libcifpp-doc - chmod a-x usr/share/doc/libcifpp-data/changelog usr/share/doc/libcifpp-data/changelog.Debian - chmod a-x usr/share/doc/libcifpp7/README.md usr/share/doc/libcifpp7/changelog usr/share/doc/libcifpp7/changelog.Debian chmod a-x usr/share/doc/libcifpp-dev/changelog usr/share/doc/libcifpp-dev/changelog.Debian chmod a-x usr/share/doc/libcifpp-doc/changelog usr/share/doc/libcifpp-doc/changelog.Debian usr/share/doc/libcifpp/_static/fonts/Lato-Bold.ttf usr/share/doc/libcifpp/_static/fonts/Lato-BoldItalic.ttf usr/share/doc/libcifpp/_static/fonts/Lato-Italic.ttf usr/share/doc/libcifpp/_static/fonts/Lato-Regular.ttf usr/share/doc/libcifpp/_static/fonts/fontawesome-webfont.eot usr/share/doc/libcifpp/_static/fonts/fontawesome-webfont.ttf - gzip -9nf usr/share/doc/libcifpp7/README.md usr/share/doc/libcifpp7/changelog usr/share/doc/libcifpp7/changelog.Debian - gzip -9nf usr/share/doc/libcifpp-data/changelog usr/share/doc/libcifpp-data/changelog.Debian + chmod a-x usr/share/doc/libcifpp-data/changelog usr/share/doc/libcifpp-data/changelog.Debian gzip -9nf usr/share/doc/libcifpp-dev/changelog usr/share/doc/libcifpp-dev/changelog.Debian - gzip -9nf usr/share/doc/libcifpp-doc/changelog usr/share/doc/libcifpp-doc/changelog.Debian usr/share/doc/libcifpp/_static/fonts/Lato-Bold.ttf usr/share/doc/libcifpp/_static/fonts/Lato-BoldItalic.ttf usr/share/doc/libcifpp/_static/fonts/Lato-Italic.ttf usr/share/doc/libcifpp/_static/fonts/Lato-Regular.ttf usr/share/doc/libcifpp/_static/fonts/fontawesome-webfont.eot usr/share/doc/libcifpp/_static/fonts/fontawesome-webfont.ttf + chmod a-x usr/share/doc/libcifpp7/README.md usr/share/doc/libcifpp7/changelog usr/share/doc/libcifpp7/changelog.Debian cd '/build/reproducible-path/libcifpp-7.0.7' + gzip -9nf usr/share/doc/libcifpp-doc/changelog usr/share/doc/libcifpp-doc/changelog.Debian usr/share/doc/libcifpp/_static/fonts/Lato-Bold.ttf usr/share/doc/libcifpp/_static/fonts/Lato-BoldItalic.ttf usr/share/doc/libcifpp/_static/fonts/Lato-Italic.ttf usr/share/doc/libcifpp/_static/fonts/Lato-Regular.ttf usr/share/doc/libcifpp/_static/fonts/fontawesome-webfont.eot usr/share/doc/libcifpp/_static/fonts/fontawesome-webfont.ttf + gzip -9nf usr/share/doc/libcifpp-data/changelog usr/share/doc/libcifpp-data/changelog.Debian + gzip -9nf usr/share/doc/libcifpp7/README.md usr/share/doc/libcifpp7/changelog usr/share/doc/libcifpp7/changelog.Debian cd '/build/reproducible-path/libcifpp-7.0.7' cd '/build/reproducible-path/libcifpp-7.0.7' cd '/build/reproducible-path/libcifpp-7.0.7' dh_fixperms + find debian/libcifpp7 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcifpp-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcifpp-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcifpp-data ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/libcifpp7 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/libcifpp-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libcifpp-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp7/usr/share/doc -type f -a -true -a ! -regex 'debian/libcifpp7/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/libcifpp-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libcifpp-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/libcifpp-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp-data/usr/share/doc -type f -a -true -a ! -regex 'debian/libcifpp-data/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/libcifpp-data/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 + find debian/libcifpp7/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcifpp-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcifpp-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/libcifpp7/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/libcifpp-data/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/libcifpp-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp7 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/libcifpp-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp-data -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/libcifpp-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp7/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w + find debian/libcifpp-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_dwz -a @@ -9011,10 +9047,10 @@ ' | LC_ALL=C sort >> debian/libcifpp-data/DEBIAN/conffiles chmod 0644 -- debian/libcifpp-data/DEBIAN/conffiles dh_gencontrol - install -m0755 -d debian/libcifpp-doc/DEBIAN - echo misc:Depends= >> debian/libcifpp-doc.substvars - echo misc:Pre-Depends= >> debian/libcifpp-doc.substvars - dpkg-gencontrol -plibcifpp-doc -ldebian/changelog -Tdebian/libcifpp-doc.substvars -cdebian/control -Pdebian/libcifpp-doc + install -m0755 -d debian/libcifpp-dev/DEBIAN + echo misc:Depends= >> debian/libcifpp-dev.substvars + echo misc:Pre-Depends= >> debian/libcifpp-dev.substvars + dpkg-gencontrol -plibcifpp-dev -ldebian/changelog -Tdebian/libcifpp-dev.substvars -cdebian/control -Pdebian/libcifpp-dev install -m0755 -d debian/libcifpp-data/DEBIAN echo misc:Pre-Depends= >> debian/libcifpp-data.substvars dpkg-gencontrol -plibcifpp-data -ldebian/changelog -Tdebian/libcifpp-data.substvars -cdebian/control -Pdebian/libcifpp-data @@ -9023,43 +9059,43 @@ echo misc:Pre-Depends= >> debian/libcifpp7.substvars install -m0755 -d debian/.debhelper/libcifpp7/dbgsym-root/DEBIAN dpkg-gencontrol -plibcifpp7 -ldebian/changelog -Tdebian/libcifpp7.substvars -cdebian/control -Pdebian/.debhelper/libcifpp7/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libcifpp7-dbgsym "-DDepends=libcifpp7 (= \${binary:Version})" "-DDescription=debug symbols for libcifpp7" -DBuild-Ids=571997a3a4142073d9db5647c4f2b36ebbc722e3 -DSection=debug -UReplaces -UBreaks - install -m0755 -d debian/libcifpp-dev/DEBIAN - echo misc:Depends= >> debian/libcifpp-dev.substvars - echo misc:Pre-Depends= >> debian/libcifpp-dev.substvars - dpkg-gencontrol -plibcifpp-dev -ldebian/changelog -Tdebian/libcifpp-dev.substvars -cdebian/control -Pdebian/libcifpp-dev - chmod 0644 -- debian/libcifpp-dev/DEBIAN/control - chmod 0644 -- debian/libcifpp-data/DEBIAN/control - chmod 0644 -- debian/libcifpp-doc/DEBIAN/control + install -m0755 -d debian/libcifpp-doc/DEBIAN + echo misc:Depends= >> debian/libcifpp-doc.substvars + echo misc:Pre-Depends= >> debian/libcifpp-doc.substvars + dpkg-gencontrol -plibcifpp-doc -ldebian/changelog -Tdebian/libcifpp-doc.substvars -cdebian/control -Pdebian/libcifpp-doc chmod 0644 -- debian/.debhelper/libcifpp7/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibcifpp7 -ldebian/changelog -Tdebian/libcifpp7.substvars -cdebian/control -Pdebian/libcifpp7 + chmod 0644 -- debian/libcifpp-data/DEBIAN/control + chmod 0644 -- debian/libcifpp-dev/DEBIAN/control + chmod 0644 -- debian/libcifpp-doc/DEBIAN/control chmod 0644 -- debian/libcifpp7/DEBIAN/control dh_md5sums - install -m0755 -d debian/libcifpp-doc/DEBIAN install -m0755 -d debian/libcifpp-dev/DEBIAN - install -m0755 -d debian/libcifpp7/DEBIAN + install -m0755 -d debian/libcifpp-doc/DEBIAN install -m0755 -d debian/libcifpp-data/DEBIAN - cd debian/libcifpp-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + install -m0755 -d debian/libcifpp7/DEBIAN cd debian/libcifpp-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - cd debian/libcifpp7 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + cd debian/libcifpp-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libcifpp-data >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + cd debian/libcifpp7 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libcifpp-dev/DEBIAN/md5sums chmod 0644 -- debian/libcifpp7/DEBIAN/md5sums install -m0755 -d debian/.debhelper/libcifpp7/dbgsym-root/DEBIAN + chmod 0644 -- debian/libcifpp-data/DEBIAN/md5sums cd debian/.debhelper/libcifpp7/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libcifpp-doc/DEBIAN/md5sums - chmod 0644 -- debian/libcifpp-data/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libcifpp7/dbgsym-root/DEBIAN/md5sums dh_builddeb + dpkg-deb --root-owner-group --build debian/libcifpp-doc .. dpkg-deb --root-owner-group --build debian/libcifpp-data .. + dpkg-deb --root-owner-group --build debian/libcifpp7 .. dpkg-deb --root-owner-group --build debian/libcifpp-dev .. dpkg-deb --root-owner-group --build debian/.debhelper/libcifpp7/dbgsym-root .. - dpkg-deb --root-owner-group --build debian/libcifpp-doc .. - dpkg-deb --root-owner-group --build debian/libcifpp7 .. dpkg-deb: building package 'libcifpp7-dbgsym' in '../libcifpp7-dbgsym_7.0.7-3_arm64.deb'. -dpkg-deb: building package 'libcifpp-doc' in '../libcifpp-doc_7.0.7-3_all.deb'. +dpkg-deb: building package 'libcifpp-dev' in '../libcifpp-dev_7.0.7-3_arm64.deb'. dpkg-deb: building package 'libcifpp7' in '../libcifpp7_7.0.7-3_arm64.deb'. +dpkg-deb: building package 'libcifpp-doc' in '../libcifpp-doc_7.0.7-3_all.deb'. dpkg-deb: building package 'libcifpp-data' in '../libcifpp-data_7.0.7-3_all.deb'. -dpkg-deb: building package 'libcifpp-dev' in '../libcifpp-dev_7.0.7-3_arm64.deb'. dpkg-genbuildinfo --build=binary -O../libcifpp_7.0.7-3_arm64.buildinfo dpkg-genchanges --build=binary -O../libcifpp_7.0.7-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -9067,12 +9103,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3180215/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3180215/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1890018 and its subdirectories -I: Current time: Fri Jan 2 00:20:23 -12 2026 -I: pbuilder-time-stamp: 1767356423 +I: removing directory /srv/workspace/pbuilder/3180215 and its subdirectories +I: Current time: Sat Nov 30 20:02:28 +14 2024 +I: pbuilder-time-stamp: 1732946548