Diff of the two buildlogs: -- --- b1/build.log 2024-11-22 11:18:17.058425959 +0000 +++ b2/build.log 2024-11-22 11:19:12.319913901 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Nov 21 23:17:30 -12 2024 -I: pbuilder-time-stamp: 1732274250 +I: Current time: Fri Dec 26 07:41:19 +14 2025 +I: pbuilder-time-stamp: 1766684479 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -29,52 +29,84 @@ dpkg-source: info: applying 0002-endianness.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/284477/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1243287/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 25 17:41 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1243287/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1243287/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='79e7d7cd8f7246e2a3a454362a907300' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='284477' - PS1='# ' - PS2='> ' + INVOCATION_ID=3d3f06126e7c45d9a63ec32082a2dbab + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1243287 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.xYx689UJ/pbuilderrc_nT3l --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.xYx689UJ/b1 --logfile b1/build.log libccp4_8.0.0-4.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.xYx689UJ/pbuilderrc_keZf --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.xYx689UJ/b2 --logfile b2/build.log libccp4_8.0.0-4.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/284477/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1243287/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -153,7 +185,7 @@ Get: 35 http://deb.debian.org/debian trixie/main arm64 gfortran arm64 4:14.2.0-1 [1424 B] Get: 36 http://deb.debian.org/debian trixie/main arm64 libmmdb2-0 arm64 2.0.22-1+b2 [309 kB] Get: 37 http://deb.debian.org/debian trixie/main arm64 libmmdb2-dev arm64 2.0.22-1+b2 [92.9 kB] -Fetched 30.4 MB in 0s (164 MB/s) +Fetched 30.4 MB in 0s (169 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20087 files and directories currently installed.) @@ -318,7 +350,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/libccp4-8.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libccp4_8.0.0-4_source.changes +I: user script /srv/workspace/pbuilder/1243287/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/1243287/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libccp4-8.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libccp4_8.0.0-4_source.changes dpkg-buildpackage: info: source package libccp4 dpkg-buildpackage: info: source version 8.0.0-4 dpkg-buildpackage: info: source distribution unstable @@ -488,29 +524,27 @@ m4 -D_gfort=1 fortran/unix.m4 > fortran/unix.f make all-am make[2]: Entering directory '/build/reproducible-path/libccp4-8.0.0' -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/ccp4_array.lo ccp4/ccp4_array.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_data.lo ccp4/cmap_data.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmtzlib.lo ccp4/cmtzlib.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/ccp4_general.lo ccp4/ccp4_general.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_header.lo ccp4/cmap_header.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/csymlib.lo ccp4/csymlib.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/ccp4_parser.lo ccp4/ccp4_parser.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_labels.lo ccp4/cmap_labels.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cvecmat.lo ccp4/cvecmat.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/ccp4_program.lo ccp4/ccp4_program.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_open.lo ccp4/cmap_open.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/library_err.lo ccp4/library_err.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/ccp4_array.lo ccp4/ccp4_array.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_data.lo ccp4/cmap_data.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmtzlib.lo ccp4/cmtzlib.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/ccp4_general.lo ccp4/ccp4_general.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_header.lo ccp4/cmap_header.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/csymlib.lo ccp4/csymlib.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/ccp4_parser.lo ccp4/ccp4_parser.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_labels.lo ccp4/cmap_labels.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cvecmat.lo ccp4/cvecmat.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/ccp4_program.lo ccp4/ccp4_program.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_open.lo ccp4/cmap_open.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/library_err.lo ccp4/library_err.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_data.c -fPIC -DPIC -o ccp4/.libs/cmap_data.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/ccp4_program.c -fPIC -DPIC -o ccp4/.libs/ccp4_program.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_header.c -fPIC -DPIC -o ccp4/.libs/cmap_header.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/ccp4_array.c -fPIC -DPIC -o ccp4/.libs/ccp4_array.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cvecmat.c -fPIC -DPIC -o ccp4/.libs/cvecmat.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmtzlib.c -fPIC -DPIC -o ccp4/.libs/cmtzlib.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/csymlib.c -fPIC -DPIC -o ccp4/.libs/csymlib.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/ccp4_array.c -fPIC -DPIC -o ccp4/.libs/ccp4_array.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/ccp4_program.c -fPIC -DPIC -o ccp4/.libs/ccp4_program.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/ccp4_parser.c -fPIC -DPIC -o ccp4/.libs/ccp4_parser.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/library_err.c -fPIC -DPIC -o ccp4/.libs/library_err.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_labels.c -fPIC -DPIC -o ccp4/.libs/cmap_labels.o -ccp4/ccp4_program.c: In function 'ccp4_vers_no': -ccp4/ccp4_program.c:68:12: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] - 68 | fgets(ccp4version,MAXLEN_PROGVERSION,cfile); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/ccp4_general.c -fPIC -DPIC -o ccp4/.libs/ccp4_general.o ccp4/library_err.c: In function 'CFile_Perror': ccp4/library_err.c:247:26: warning: comparison between pointer and zero character constant [-Wpointer-compare] @@ -519,40 +553,44 @@ ccp4/library_err.c:247:22: note: did you mean to dereference the pointer? 247 | if (msg == NULL || msg == '\0') colon = ""; | ^ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/ccp4_parser.c -fPIC -DPIC -o ccp4/.libs/ccp4_parser.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/ccp4_unitcell.lo ccp4/ccp4_unitcell.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_skew.lo ccp4/cmap_skew.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_header.c -fPIC -DPIC -o ccp4/.libs/cmap_header.o +ccp4/ccp4_program.c: In function 'ccp4_vers_no': +ccp4/ccp4_program.c:68:12: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] + 68 | fgets(ccp4version,MAXLEN_PROGVERSION,cfile); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_open.c -fPIC -DPIC -o ccp4/.libs/cmap_open.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/library_file.lo ccp4/library_file.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cvecmat.c -fPIC -DPIC -o ccp4/.libs/cvecmat.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_accessor.lo ccp4/cmap_accessor.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_stats.lo ccp4/cmap_stats.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/library_utils.lo ccp4/library_utils.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_close.lo ccp4/cmap_close.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_symop.lo ccp4/cmap_symop.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_labels.c -fPIC -DPIC -o ccp4/.libs/cmap_labels.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/ccp4_unitcell.lo ccp4/ccp4_unitcell.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_skew.lo ccp4/cmap_skew.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/library_file.lo ccp4/library_file.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_accessor.lo ccp4/cmap_accessor.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_stats.lo ccp4/cmap_stats.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/library_utils.lo ccp4/library_utils.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_close.lo ccp4/cmap_close.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/cmap_symop.lo ccp4/cmap_symop.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/ccp4_unitcell.c -fPIC -DPIC -o ccp4/.libs/ccp4_unitcell.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/library_file.c -fPIC -DPIC -o ccp4/.libs/library_file.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_skew.c -fPIC -DPIC -o ccp4/.libs/cmap_skew.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_accessor.c -fPIC -DPIC -o ccp4/.libs/cmap_accessor.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/pack_c.lo ccp4/pack_c.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_symop.c -fPIC -DPIC -o ccp4/.libs/cmap_symop.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-ccp4_diskio_f.lo `test -f 'fortran/ccp4_diskio_f.c' || echo './'`fortran/ccp4_diskio_f.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/library_file.c -fPIC -DPIC -o ccp4/.libs/library_file.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_stats.c -fPIC -DPIC -o ccp4/.libs/cmap_stats.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_accessor.c -fPIC -DPIC -o ccp4/.libs/cmap_accessor.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/library_utils.c -fPIC -DPIC -o ccp4/.libs/library_utils.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-ccp4_parser_f.lo `test -f 'fortran/ccp4_parser_f.c' || echo './'`fortran/ccp4_parser_f.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o ccp4/pack_c.lo ccp4/pack_c.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-ccp4_diskio_f.lo `test -f 'fortran/ccp4_diskio_f.c' || echo './'`fortran/ccp4_diskio_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_close.c -fPIC -DPIC -o ccp4/.libs/cmap_close.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-cmaplib_f.lo `test -f 'fortran/cmaplib_f.c' || echo './'`fortran/cmaplib_f.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-csymlib_f.lo `test -f 'fortran/csymlib_f.c' || echo './'`fortran/csymlib_f.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-ccp4_general_f.lo `test -f 'fortran/ccp4_general_f.c' || echo './'`fortran/ccp4_general_f.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-ccp4_unitcell_f.lo `test -f 'fortran/ccp4_unitcell_f.c' || echo './'`fortran/ccp4_unitcell_f.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-cmtzlib_f.lo `test -f 'fortran/cmtzlib_f.c' || echo './'`fortran/cmtzlib_f.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-library_f.lo `test -f 'fortran/library_f.c' || echo './'`fortran/library_f.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-ccp4_parser_f.lo `test -f 'fortran/ccp4_parser_f.c' || echo './'`fortran/ccp4_parser_f.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-cmaplib_f.lo `test -f 'fortran/cmaplib_f.c' || echo './'`fortran/cmaplib_f.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/cmap_symop.c -fPIC -DPIC -o ccp4/.libs/cmap_symop.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-csymlib_f.lo `test -f 'fortran/csymlib_f.c' || echo './'`fortran/csymlib_f.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-ccp4_general_f.lo `test -f 'fortran/ccp4_general_f.c' || echo './'`fortran/ccp4_general_f.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-ccp4_unitcell_f.lo `test -f 'fortran/ccp4_unitcell_f.c' || echo './'`fortran/ccp4_unitcell_f.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/ccp4_parser_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_parser_f.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-cmtzlib_f.lo `test -f 'fortran/cmtzlib_f.c' || echo './'`fortran/cmtzlib_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c ccp4/pack_c.c -fPIC -DPIC -o ccp4/.libs/pack_c.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/ccp4_unitcell_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_unitcell_f.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/ccp4_general_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_general_f.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/csymlib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-csymlib_f.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/ccp4_diskio_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_diskio_f.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/cmaplib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-cmaplib_f.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c -o fortran/libccp4f_la-library_f.lo `test -f 'fortran/library_f.c' || echo './'`fortran/library_f.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/csymlib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-csymlib_f.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/ccp4_unitcell_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_unitcell_f.o +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/ccplib.lo fortran/ccplib.f fortran/ccp4_unitcell_f.c: In function 'ccp4uc_f_orthu_to_fracu_': fortran/ccp4_unitcell_f.c:124:3: warning: 'ccp4uc_orthu_to_fracu' reading 48 bytes from a region of size 24 [-Wstringop-overread] 124 | ccp4uc_orthu_to_fracu((const double (*)[3])rf_cmat, duo, duf); @@ -574,19 +612,14 @@ ./ccp4/ccp4_unitcell.h:77:6: note: in a call to function 'ccp4uc_orthu_to_fracu' 77 | void ccp4uc_orthu_to_fracu(const double rf[3][3], const double uo[6], double uf[6]); | ^~~~~~~~~~~~~~~~~~~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/cmaplib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-cmaplib_f.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/ccp4_parser_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_parser_f.o -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/ccplib.lo fortran/ccplib.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/fftlib.lo fortran/fftlib.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/modlib.lo fortran/modlib.f -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/library_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-library_f.o -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/parser.lo fortran/parser.f +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/ccp4_general_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_general_f.o +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/fftlib.lo fortran/fftlib.f libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/cmtzlib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-cmtzlib_f.o -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/rwbrook.lo fortran/rwbrook.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/libhtml.lo fortran/libhtml.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/keyparse.lo fortran/keyparse.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/modlib.lo fortran/modlib.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/parser.lo fortran/parser.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/rwbrook.lo fortran/rwbrook.f +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -c fortran/library_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-library_f.o libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/ccplib.f -fPIC -o fortran/.libs/ccplib.o -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/dna_output.lo fortran/dna_output.f fortran/ccplib.f:1039:72: 1039 | 10 IARR1(J)=IARR2(J) @@ -597,7 +630,6 @@ 1064 | 10 ARR1(J)=ARR2(J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) -libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/fftlib.f -fPIC -o fortran/.libs/fftlib.o fortran/ccplib.f:1834:72: 1834 | 10 ARR1(J)=0 @@ -613,12 +645,53 @@ 1879 | 10 ARR1(J)=0.0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/libhtml.lo fortran/libhtml.f +libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/fftlib.f -fPIC -o fortran/.libs/fftlib.o +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/keyparse.lo fortran/keyparse.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/dna_output.lo fortran/dna_output.f +libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/parser.f -fPIC -o fortran/.libs/parser.o +libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/rwbrook.f -fPIC -o fortran/.libs/rwbrook.o libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/modlib.f -fPIC -o fortran/.libs/modlib.o fortran/fftlib.f:1252:72: 1252 | IF (K-I) 90,130,100 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) +fortran/rwbrook.f:1633:72: + + 1633 | DO 10 J=1,4 + | 1 +Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) +fortran/rwbrook.f:1651:72: + + 1651 | DO 20 J=1,3 + | 1 +Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) +fortran/rwbrook.f:2314:72: + + 2314 | DO 10 J=1,3 + | 1 +Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) +fortran/rwbrook.f:2320:72: + + 2320 | DO 20 J=1,3 + | 1 +Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) +fortran/rwbrook.f:2374:72: + + 2374 | 1 CELLD(I) = CELL(I) + | 1 +Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) +fortran/rwbrook.f:2410:72: + + 2410 | 1 RCEL(I) = CELLAS(I) + | 1 +Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) +fortran/rwbrook.f:2817:72: + + 2817 | DO 40 J = 1,3 + | 1 +Warning: Fortran 2018 deleted feature: Shared DO termination label 40 at (1) fortran/modlib.f:256:72: 256 | DO 100 I = 1, P @@ -699,105 +772,15 @@ 1443 | A(I,I) = H | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) -libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/parser.f -fPIC -o fortran/.libs/parser.o -libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/rwbrook.f -fPIC -o fortran/.libs/rwbrook.o -libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/libhtml.f -fPIC -o fortran/.libs/libhtml.o -fortran/rwbrook.f:1633:72: - - 1633 | DO 10 J=1,4 - | 1 -Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) -fortran/rwbrook.f:1651:72: - - 1651 | DO 20 J=1,3 - | 1 -Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) -fortran/rwbrook.f:2314:72: - - 2314 | DO 10 J=1,3 - | 1 -Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) -fortran/rwbrook.f:2320:72: - - 2320 | DO 20 J=1,3 - | 1 -Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) -fortran/rwbrook.f:2374:72: - - 2374 | 1 CELLD(I) = CELL(I) - | 1 -Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) -fortran/rwbrook.f:2410:72: - - 2410 | 1 RCEL(I) = CELLAS(I) - | 1 -Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) -fortran/rwbrook.f:2817:72: - - 2817 | DO 40 J = 1,3 - | 1 -Warning: Fortran 2018 deleted feature: Shared DO termination label 40 at (1) -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/pack_f.lo fortran/pack_f.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/pxxml.lo fortran/pxxml.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/lgglib.lo fortran/lgglib.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/plot84lib.lo fortran/plot84lib.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/plotsubs.lo fortran/plotsubs.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/pack_f.lo fortran/pack_f.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/pxxml.lo fortran/pxxml.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/lgglib.lo fortran/lgglib.f libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/keyparse.f -fPIC -o fortran/.libs/keyparse.o -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/sorting_main.lo fortran/sorting_main.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/unix.lo fortran/unix.f -libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/dna_output.f -fPIC -o fortran/.libs/dna_output.o -libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/plot84lib.f -fPIC -o fortran/.libs/plot84lib.o +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/plot84lib.lo fortran/plot84lib.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/plotsubs.lo fortran/plotsubs.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/sorting_main.lo fortran/sorting_main.f libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/pack_f.f -fPIC -o fortran/.libs/pack_f.o -libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/unix.f -fPIC -o fortran/.libs/unix.o libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/lgglib.f -fPIC -o fortran/.libs/lgglib.o -libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/pxxml.f -fPIC -o fortran/.libs/pxxml.o -ccp4/cmtzlib.c: In function 'MtzPut': -ccp4/cmtzlib.c:2746:27: warning: '%74s' directive writing between 74 and 80 bytes into a region of size 76 [-Wformat-overflow=] - 2746 | sprintf(hdrrec,"SYMM %74s",symline); - | ^~~~ ~~~~~~~ -In file included from /usr/include/stdio.h:970, - from ccp4/cmtzlib.c:23: -In function 'sprintf', - inlined from 'MtzPut' at ccp4/cmtzlib.c:2746:6: -/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 80 and 86 bytes into a destination of size 81 - 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 31 | __glibc_objsize (__s), __fmt, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 32 | __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~ -ccp4/cmtzlib.c: In function 'MtzPut': -ccp4/cmtzlib.c:2840:52: warning: '%1X' directive writing between 1 and 8 bytes into a region of size 7 [-Wformat-overflow=] - 2840 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d","M/ISYM",mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); - | ^~~ -ccp4/cmtzlib.c:2840:27: note: directive argument in the range [0, 2147483647] - 2840 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d","M/ISYM",mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'sprintf', - inlined from 'MtzPut' at ccp4/cmtzlib.c:2840:5: -/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 81 and 95 bytes into a destination of size 81 - 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 31 | __glibc_objsize (__s), __fmt, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 32 | __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~ -ccp4/cmtzlib.c: In function 'MtzPut': -ccp4/cmtzlib.c:2842:52: warning: '%1X' directive writing between 1 and 8 bytes into a region of size 7 [-Wformat-overflow=] - 2842 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d",mtz->xtal[i]->set[j]->col[k]->label,mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); - | ^~~ -ccp4/cmtzlib.c:2842:27: note: directive argument in the range [0, 2147483647] - 2842 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d",mtz->xtal[i]->set[j]->col[k]->label,mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'sprintf', - inlined from 'MtzPut' at ccp4/cmtzlib.c:2842:5: -/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 81 and 95 bytes into a destination of size 81 - 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 31 | __glibc_objsize (__s), __fmt, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 32 | __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~ fortran/lgglib.f:43:72: 43 | 10 A(I)=CELL(I)*V(I) @@ -813,6 +796,7 @@ 52 | 10 A(IJ,II)=A1(II,IJ) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) +libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/libhtml.f -fPIC -o fortran/.libs/libhtml.o fortran/lgglib.f:60:72: 60 | DO 10 IJ=1,IN @@ -873,7 +857,8 @@ 668 | 10 DOSQ = DOSQ + V(I)*V(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) -libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/sorting_main.f -fPIC -o fortran/.libs/sorting_main.o +libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/pxxml.f -fPIC -o fortran/.libs/pxxml.o +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -fallow-argument-mismatch -c -o fortran/unix.lo fortran/unix.f fortran/lgglib.f:1766:72: 1766 | DO 10 I2=1,IN @@ -904,6 +889,7 @@ 1980 | 1 IF (TH(I).GT.180.) TH(I) = TH(I) - 360. | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) +libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/dna_output.f -fPIC -o fortran/.libs/dna_output.o fortran/lgglib.f:2106:72: 2106 | DO 50 J = 1, N @@ -1029,7 +1015,6 @@ 3222 | 10 POIMULT=V1(I)*V2(I)+POIMULT | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) -libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/plotsubs.f -fPIC -o fortran/.libs/plotsubs.o fortran/lgglib.f:4072:72: 4072 | DO 5 J = 1, NATM @@ -1040,21 +1025,7 @@ 4073 | 5 CALL ARRGIVE(3,EMT(1,I),VT((J-1)*3+1,I+3)) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 5 at (1) -fortran/plotsubs.f:312:72: - - 312 | 1 CALL PLTDWU(X(I),Y(I)) - | 1 -Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) -fortran/plotsubs.f:352:72: - - 352 | IF(J) 26,26,27 - | 1 -Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) -fortran/plotsubs.f:377:72: - - 377 | IF(J) 30,28,20 - | 1 -Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) +libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/plot84lib.f -fPIC -o fortran/.libs/plot84lib.o fortran/lgglib.f:5842:72: 5842 | 10 C=C+V(I)*V(I) @@ -1080,6 +1051,7 @@ 1489 | 1 res(natm), (X(I,NATM),I=1,3),occ(natm),bfac(natm) | 1 Warning: Branch at (1) may result in an infinite loop +libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/sorting_main.f -fPIC -o fortran/.libs/sorting_main.o fortran/lgglib.f:1546:72: 1546 | 1 , (X(I,NATM),I=1,3) @@ -1097,6 +1069,23 @@ 2424 | rt(j,4) = gt(4,j) | 1 Warning: Array reference at (1) out of bounds (4 > 3) in loop beginning at (2) +libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/unix.f -fPIC -o fortran/.libs/unix.o +libtool: compile: gfortran -fno-second-underscore -fallow-argument-mismatch -c fortran/plotsubs.f -fPIC -o fortran/.libs/plotsubs.o +fortran/plotsubs.f:312:72: + + 312 | 1 CALL PLTDWU(X(I),Y(I)) + | 1 +Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) +fortran/plotsubs.f:352:72: + + 352 | IF(J) 26,26,27 + | 1 +Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) +fortran/plotsubs.f:377:72: + + 377 | IF(J) 30,28,20 + | 1 +Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/plot84lib.f:6390:25: 6390 | CALL QWRITE(IUNITR,IREC,NRECL) @@ -1123,12 +1112,59 @@ 10427 | CALL TRIPLOT(ICLEAR,1) | 1 Warning: Rank mismatch in argument 'line' at (1) (rank-1 and scalar) -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -no-undefined -Wl,-z,relro -o ccp4/libccp4c.la -rpath /usr/lib/aarch64-linux-gnu ccp4/ccp4_array.lo ccp4/cmap_data.lo ccp4/cmtzlib.lo ccp4/ccp4_general.lo ccp4/cmap_header.lo ccp4/csymlib.lo ccp4/ccp4_parser.lo ccp4/cmap_labels.lo ccp4/cvecmat.lo ccp4/ccp4_program.lo ccp4/cmap_open.lo ccp4/library_err.lo ccp4/ccp4_unitcell.lo ccp4/cmap_skew.lo ccp4/library_file.lo ccp4/cmap_accessor.lo ccp4/cmap_stats.lo ccp4/library_utils.lo ccp4/cmap_close.lo ccp4/cmap_symop.lo ccp4/pack_c.lo -lm +ccp4/cmtzlib.c: In function 'MtzPut': +ccp4/cmtzlib.c:2746:27: warning: '%74s' directive writing between 74 and 80 bytes into a region of size 76 [-Wformat-overflow=] + 2746 | sprintf(hdrrec,"SYMM %74s",symline); + | ^~~~ ~~~~~~~ +In file included from /usr/include/stdio.h:970, + from ccp4/cmtzlib.c:23: +In function 'sprintf', + inlined from 'MtzPut' at ccp4/cmtzlib.c:2746:6: +/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 80 and 86 bytes into a destination of size 81 + 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 31 | __glibc_objsize (__s), __fmt, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 32 | __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~ +ccp4/cmtzlib.c: In function 'MtzPut': +ccp4/cmtzlib.c:2840:52: warning: '%1X' directive writing between 1 and 8 bytes into a region of size 7 [-Wformat-overflow=] + 2840 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d","M/ISYM",mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); + | ^~~ +ccp4/cmtzlib.c:2840:27: note: directive argument in the range [0, 2147483647] + 2840 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d","M/ISYM",mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'sprintf', + inlined from 'MtzPut' at ccp4/cmtzlib.c:2840:5: +/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 81 and 95 bytes into a destination of size 81 + 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 31 | __glibc_objsize (__s), __fmt, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 32 | __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~ +ccp4/cmtzlib.c: In function 'MtzPut': +ccp4/cmtzlib.c:2842:52: warning: '%1X' directive writing between 1 and 8 bytes into a region of size 7 [-Wformat-overflow=] + 2842 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d",mtz->xtal[i]->set[j]->col[k]->label,mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); + | ^~~ +ccp4/cmtzlib.c:2842:27: note: directive argument in the range [0, 2147483647] + 2842 | sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d",mtz->xtal[i]->set[j]->col[k]->label,mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'sprintf', + inlined from 'MtzPut' at ccp4/cmtzlib.c:2842:5: +/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 81 and 95 bytes into a destination of size 81 + 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 31 | __glibc_objsize (__s), __fmt, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 32 | __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~ +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libccp4-8.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-incompatible-pointer-types -no-undefined -Wl,-z,relro -o ccp4/libccp4c.la -rpath /usr/lib/aarch64-linux-gnu ccp4/ccp4_array.lo ccp4/cmap_data.lo ccp4/cmtzlib.lo ccp4/ccp4_general.lo ccp4/cmap_header.lo ccp4/csymlib.lo ccp4/ccp4_parser.lo ccp4/cmap_labels.lo ccp4/cvecmat.lo ccp4/ccp4_program.lo ccp4/cmap_open.lo ccp4/library_err.lo ccp4/ccp4_unitcell.lo ccp4/cmap_skew.lo ccp4/library_file.lo ccp4/cmap_accessor.lo ccp4/cmap_stats.lo ccp4/library_utils.lo ccp4/cmap_close.lo ccp4/cmap_symop.lo ccp4/pack_c.lo -lm libtool: link: gcc -shared -fPIC -DPIC ccp4/.libs/ccp4_array.o ccp4/.libs/cmap_data.o ccp4/.libs/cmtzlib.o ccp4/.libs/ccp4_general.o ccp4/.libs/cmap_header.o ccp4/.libs/csymlib.o ccp4/.libs/ccp4_parser.o ccp4/.libs/cmap_labels.o ccp4/.libs/cvecmat.o ccp4/.libs/ccp4_program.o ccp4/.libs/cmap_open.o ccp4/.libs/library_err.o ccp4/.libs/ccp4_unitcell.o ccp4/.libs/cmap_skew.o ccp4/.libs/library_file.o ccp4/.libs/cmap_accessor.o ccp4/.libs/cmap_stats.o ccp4/.libs/library_utils.o ccp4/.libs/cmap_close.o ccp4/.libs/cmap_symop.o ccp4/.libs/pack_c.o -lm -g -O2 -fstack-protector-strong -mbranch-protection=standard -Wl,-z -Wl,relro -Wl,-soname -Wl,libccp4c.so.0 -o ccp4/.libs/libccp4c.so.0.0.0 libtool: link: (cd "ccp4/.libs" && rm -f "libccp4c.so.0" && ln -s "libccp4c.so.0.0.0" "libccp4c.so.0") libtool: link: (cd "ccp4/.libs" && rm -f "libccp4c.so" && ln -s "libccp4c.so.0.0.0" "libccp4c.so") libtool: link: ( cd "ccp4/.libs" && rm -f "libccp4c.la" && ln -s "../libccp4c.la" "libccp4c.la" ) -/bin/bash ./libtool --tag=F77 --mode=link gfortran -fno-second-underscore -fallow-argument-mismatch -no-undefined -Wl,-z,relro -o fortran/libccp4f.la -rpath /usr/lib/aarch64-linux-gnu fortran/libccp4f_la-ccp4_diskio_f.lo fortran/libccp4f_la-ccp4_parser_f.lo fortran/libccp4f_la-cmaplib_f.lo fortran/libccp4f_la-csymlib_f.lo fortran/libccp4f_la-ccp4_general_f.lo fortran/libccp4f_la-ccp4_unitcell_f.lo fortran/libccp4f_la-cmtzlib_f.lo fortran/libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb2 -lm +/bin/sh ./libtool --tag=F77 --mode=link gfortran -fno-second-underscore -fallow-argument-mismatch -no-undefined -Wl,-z,relro -o fortran/libccp4f.la -rpath /usr/lib/aarch64-linux-gnu fortran/libccp4f_la-ccp4_diskio_f.lo fortran/libccp4f_la-ccp4_parser_f.lo fortran/libccp4f_la-cmaplib_f.lo fortran/libccp4f_la-csymlib_f.lo fortran/libccp4f_la-ccp4_general_f.lo fortran/libccp4f_la-ccp4_unitcell_f.lo fortran/libccp4f_la-cmtzlib_f.lo fortran/libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb2 -lm libtool: link: gfortran -shared -fPIC fortran/.libs/libccp4f_la-ccp4_diskio_f.o fortran/.libs/libccp4f_la-ccp4_parser_f.o fortran/.libs/libccp4f_la-cmaplib_f.o fortran/.libs/libccp4f_la-csymlib_f.o fortran/.libs/libccp4f_la-ccp4_general_f.o fortran/.libs/libccp4f_la-ccp4_unitcell_f.o fortran/.libs/libccp4f_la-cmtzlib_f.o fortran/.libs/libccp4f_la-library_f.o fortran/.libs/ccplib.o fortran/.libs/fftlib.o fortran/.libs/modlib.o fortran/.libs/parser.o fortran/.libs/rwbrook.o fortran/.libs/libhtml.o fortran/.libs/keyparse.o fortran/.libs/dna_output.o fortran/.libs/pack_f.o fortran/.libs/pxxml.o fortran/.libs/lgglib.o fortran/.libs/plot84lib.o fortran/.libs/plotsubs.o fortran/.libs/sorting_main.o fortran/.libs/unix.o -Wl,-rpath -Wl,/build/reproducible-path/libccp4-8.0.0/ccp4/.libs ccp4/.libs/libccp4c.so -lmmdb2 -lm -Wl,-z -Wl,relro -Wl,-soname -Wl,libccp4f.so.0 -o fortran/.libs/libccp4f.so.0.0.0 libtool: link: (cd "fortran/.libs" && rm -f "libccp4f.so.0" && ln -s "libccp4f.so.0.0.0" "libccp4f.so.0") libtool: link: (cd "fortran/.libs" && rm -f "libccp4f.so" && ln -s "libccp4f.so.0.0.0" "libccp4f.so") @@ -1151,13 +1187,13 @@ make[2]: Entering directory '/build/reproducible-path/libccp4-8.0.0' make[3]: Entering directory '/build/reproducible-path/libccp4-8.0.0' /usr/bin/mkdir -p '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/aarch64-linux-gnu' - /bin/bash ./libtool --mode=install /usr/bin/install -c ccp4/libccp4c.la fortran/libccp4f.la '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/aarch64-linux-gnu' + /bin/sh ./libtool --mode=install /usr/bin/install -c ccp4/libccp4c.la fortran/libccp4f.la '/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c ccp4/.libs/libccp4c.so.0.0.0 /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/aarch64-linux-gnu/libccp4c.so.0.0.0 libtool: install: (cd /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libccp4c.so.0.0.0 libccp4c.so.0 || { rm -f libccp4c.so.0 && ln -s libccp4c.so.0.0.0 libccp4c.so.0; }; }) libtool: install: (cd /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libccp4c.so.0.0.0 libccp4c.so || { rm -f libccp4c.so && ln -s libccp4c.so.0.0.0 libccp4c.so; }; }) libtool: install: /usr/bin/install -c ccp4/.libs/libccp4c.lai /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/aarch64-linux-gnu/libccp4c.la libtool: warning: relinking 'fortran/libccp4f.la' -libtool: install: (cd /build/reproducible-path/libccp4-8.0.0; /bin/bash "/build/reproducible-path/libccp4-8.0.0/libtool" --tag F77 --mode=relink gfortran -fno-second-underscore -fallow-argument-mismatch -no-undefined -Wl,-z,relro -o fortran/libccp4f.la -rpath /usr/lib/aarch64-linux-gnu fortran/libccp4f_la-ccp4_diskio_f.lo fortran/libccp4f_la-ccp4_parser_f.lo fortran/libccp4f_la-cmaplib_f.lo fortran/libccp4f_la-csymlib_f.lo fortran/libccp4f_la-ccp4_general_f.lo fortran/libccp4f_la-ccp4_unitcell_f.lo fortran/libccp4f_la-cmtzlib_f.lo fortran/libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb2 -lm -inst-prefix-dir /build/reproducible-path/libccp4-8.0.0/debian/tmp) +libtool: install: (cd /build/reproducible-path/libccp4-8.0.0; /bin/sh "/build/reproducible-path/libccp4-8.0.0/libtool" --tag F77 --mode=relink gfortran -fno-second-underscore -fallow-argument-mismatch -no-undefined -Wl,-z,relro -o fortran/libccp4f.la -rpath /usr/lib/aarch64-linux-gnu fortran/libccp4f_la-ccp4_diskio_f.lo fortran/libccp4f_la-ccp4_parser_f.lo fortran/libccp4f_la-cmaplib_f.lo fortran/libccp4f_la-csymlib_f.lo fortran/libccp4f_la-ccp4_general_f.lo fortran/libccp4f_la-ccp4_unitcell_f.lo fortran/libccp4f_la-cmtzlib_f.lo fortran/libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb2 -lm -inst-prefix-dir /build/reproducible-path/libccp4-8.0.0/debian/tmp) libtool: relink: gfortran -shared -fPIC fortran/.libs/libccp4f_la-ccp4_diskio_f.o fortran/.libs/libccp4f_la-ccp4_parser_f.o fortran/.libs/libccp4f_la-cmaplib_f.o fortran/.libs/libccp4f_la-csymlib_f.o fortran/.libs/libccp4f_la-ccp4_general_f.o fortran/.libs/libccp4f_la-ccp4_unitcell_f.o fortran/.libs/libccp4f_la-cmtzlib_f.o fortran/.libs/libccp4f_la-library_f.o fortran/.libs/ccplib.o fortran/.libs/fftlib.o fortran/.libs/modlib.o fortran/.libs/parser.o fortran/.libs/rwbrook.o fortran/.libs/libhtml.o fortran/.libs/keyparse.o fortran/.libs/dna_output.o fortran/.libs/pack_f.o fortran/.libs/pxxml.o fortran/.libs/lgglib.o fortran/.libs/plot84lib.o fortran/.libs/plotsubs.o fortran/.libs/sorting_main.o fortran/.libs/unix.o -L/build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -lccp4c -lmmdb2 -lm -Wl,-z -Wl,relro -Wl,-soname -Wl,libccp4f.so.0 -o fortran/.libs/libccp4f.so.0.0.0 libtool: install: /usr/bin/install -c fortran/.libs/libccp4f.so.0.0.0T /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/aarch64-linux-gnu/libccp4f.so.0.0.0 libtool: install: (cd /build/reproducible-path/libccp4-8.0.0/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libccp4f.so.0.0.0 libccp4f.so.0 || { rm -f libccp4f.so.0 && ln -s libccp4f.so.0.0.0 libccp4f.so.0; }; }) @@ -1206,12 +1242,12 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'libccp4c0t64-dbgsym' in '../libccp4c0t64-dbgsym_8.0.0-4_arm64.deb'. -dpkg-deb: building package 'libccp4c0t64' in '../libccp4c0t64_8.0.0-4_arm64.deb'. -dpkg-deb: building package 'libccp4f0t64' in '../libccp4f0t64_8.0.0-4_arm64.deb'. -dpkg-deb: building package 'libccp4-dev' in '../libccp4-dev_8.0.0-4_arm64.deb'. dpkg-deb: building package 'libccp4f0t64-dbgsym' in '../libccp4f0t64-dbgsym_8.0.0-4_arm64.deb'. dpkg-deb: building package 'libccp4-data' in '../libccp4-data_8.0.0-4_all.deb'. +dpkg-deb: building package 'libccp4-dev' in '../libccp4-dev_8.0.0-4_arm64.deb'. +dpkg-deb: building package 'libccp4c0t64' in '../libccp4c0t64_8.0.0-4_arm64.deb'. +dpkg-deb: building package 'libccp4c0t64-dbgsym' in '../libccp4c0t64-dbgsym_8.0.0-4_arm64.deb'. +dpkg-deb: building package 'libccp4f0t64' in '../libccp4f0t64_8.0.0-4_arm64.deb'. dpkg-genbuildinfo --build=binary -O../libccp4_8.0.0-4_arm64.buildinfo dpkg-genchanges --build=binary -O../libccp4_8.0.0-4_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1219,12 +1255,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1243287/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1243287/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/284477 and its subdirectories -I: Current time: Thu Nov 21 23:18:16 -12 2024 -I: pbuilder-time-stamp: 1732274296 +I: removing directory /srv/workspace/pbuilder/1243287 and its subdirectories +I: Current time: Fri Dec 26 07:42:11 +14 2025 +I: pbuilder-time-stamp: 1766684531