Diff of the two buildlogs: -- --- b1/build.log 2024-11-17 21:51:51.084222634 +0000 +++ b2/build.log 2024-11-17 21:54:27.721111172 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Dec 20 16:13:45 -12 2025 -I: pbuilder-time-stamp: 1766290425 +I: Current time: Mon Nov 18 11:51:54 +14 2024 +I: pbuilder-time-stamp: 1731880314 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -27,52 +27,84 @@ dpkg-source: info: applying add-a-version-header-in-snakemake.el-to-.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/464363/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1088878/tmp/hooks/D01_modify_environment starting +debug: Running on codethink02-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 17 21:52 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1088878/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1088878/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='a31e2fc77f3047b289cff5011daa1e91' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='464363' - PS1='# ' - PS2='> ' + INVOCATION_ID=591fe9536f244c7eb740469f20dee0ff + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1088878 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zdV7g0bB/pbuilderrc_TyZg --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zdV7g0bB/b1 --logfile b1/build.log elpa-snakemake_2.0.0+git20231210.4ad41da-3.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zdV7g0bB/pbuilderrc_ueLy --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zdV7g0bB/b2 --logfile b2/build.log elpa-snakemake_2.0.0+git20231210.4ad41da-3.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink01-arm64 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/464363/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1088878/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -314,7 +346,7 @@ Get: 198 http://deb.debian.org/debian trixie/main arm64 python3-yaml arm64 6.0.2-1+b1 [148 kB] Get: 199 http://deb.debian.org/debian trixie/main arm64 python3-yte all 1.5.4-1 [13.6 kB] Get: 200 http://deb.debian.org/debian trixie/main arm64 snakemake all 7.32.4-6 [318 kB] -Fetched 102 MB in 1s (163 MB/s) +Fetched 102 MB in 1s (114 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20089 files and directories currently installed.) @@ -973,8 +1005,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Sun Dec 21 04:14:11 UTC 2025. -Universal Time is now: Sun Dec 21 04:14:11 UTC 2025. +Local time is now: Sun Nov 17 21:52:55 UTC 2024. +Universal Time is now: Sun Nov 17 21:52:55 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up liberror-perl (0.17029-2) ... @@ -1143,23 +1175,16 @@ update-alternatives: using /usr/bin/emacs to provide /usr/bin/editor (editor) in auto mode update-alternatives: using /usr/bin/emacsclient.emacs to provide /usr/bin/emacsclient (emacsclient) in auto mode tsort: -: input contains a loop: -tsort: elpa-compat tsort: emacsen-common tsort: elpa-seq -tsort: -: input contains a loop: -tsort: elpa-compat -tsort: emacsen-common -tsort: -: input contains a loop: -tsort: elpa-seq -tsort: emacsen-common -Install elpa-compat for emacs -install/compat-30.0.0.0: Handling install of emacsen flavor emacs -install/compat-30.0.0.0: byte-compiling for emacs +Install emacsen-common for emacs +emacsen-common: Handling install of emacsen flavor emacs Install elpa-seq for emacs install/seq-2.24: Handling install of emacsen flavor emacs install/seq-2.24: byte-compiling for emacs -Install emacsen-common for emacs -emacsen-common: Handling install of emacsen flavor emacs +Install elpa-compat for emacs +install/compat-30.0.0.0: Handling install of emacsen flavor emacs +install/compat-30.0.0.0: byte-compiling for emacs Install elpa-transient for emacs install/transient-0.7.8: Handling install of emacsen flavor emacs install/transient-0.7.8: byte-compiling for emacs @@ -1185,7 +1210,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/elpa-snakemake-2.0.0+git20231210.4ad41da/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../elpa-snakemake_2.0.0+git20231210.4ad41da-3_source.changes +I: user script /srv/workspace/pbuilder/1088878/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/1088878/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/elpa-snakemake-2.0.0+git20231210.4ad41da/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../elpa-snakemake_2.0.0+git20231210.4ad41da-3_source.changes dpkg-buildpackage: info: source package elpa-snakemake dpkg-buildpackage: info: source version 2.0.0+git20231210.4ad41da-3 dpkg-buildpackage: info: source distribution unstable @@ -1208,29 +1237,29 @@ dh_auto_test make -j12 test make[1]: Entering directory '/build/reproducible-path/elpa-snakemake-2.0.0+git20231210.4ad41da' -Running 20 tests (2025-12-20 16:14:36-1200, selector `(not (tag interactive))') - passed 1/20 snakemake-test-all-rules (0.726233 sec) - passed 2/20 snakemake-test-beginning-of-block (0.002485 sec) - passed 3/20 snakemake-test-block-info (0.000535 sec) - passed 4/20 snakemake-test-block-or-defun-name (0.001882 sec) - passed 5/20 snakemake-test-check-target (4.239263 sec) - passed 6/20 snakemake-test-end-of-block (0.001715 sec) - passed 7/20 snakemake-test-file-targets (0.000954 sec) - passed 8/20 snakemake-test-file-targets-at-point (1.184410 sec) - passed 9/20 snakemake-test-indent-line/at-rule-block (0.003691 sec) - passed 10/20 snakemake-test-indent-line/field-key (0.007479 sec) - passed 11/20 snakemake-test-indent-line/field-value (0.008612 sec) - passed 12/20 snakemake-test-indent-line/outside-rule (0.000743 sec) - passed 13/20 snakemake-test-indent-line/toplevel-command (0.002316 sec) - passed 14/20 snakemake-test-org-link-file-targets (0.433697 sec) - passed 15/20 snakemake-test-region-file-targets (0.000271 sec) - passed 16/20 snakemake-test-rule-at-point (1.174773 sec) - passed 17/20 snakemake-test-rule-targets (0.396748 sec) - passed 18/20 snakemake-test-snakefile-directory (0.001031 sec) - passed 19/20 snakemake-test-split-lines (0.000277 sec) - passed 20/20 snakemake-test/indent-region (0.006119 sec) +Running 20 tests (2024-11-18 11:54:06+1400, selector `(not (tag interactive))') + passed 1/20 snakemake-test-all-rules (1.238795 sec) + passed 2/20 snakemake-test-beginning-of-block (0.000987 sec) + passed 3/20 snakemake-test-block-info (0.000263 sec) + passed 4/20 snakemake-test-block-or-defun-name (0.000771 sec) + passed 5/20 snakemake-test-check-target (7.919255 sec) + passed 6/20 snakemake-test-end-of-block (0.000762 sec) + passed 7/20 snakemake-test-file-targets (0.000491 sec) + passed 8/20 snakemake-test-file-targets-at-point (2.289911 sec) + passed 9/20 snakemake-test-indent-line/at-rule-block (0.001534 sec) + passed 10/20 snakemake-test-indent-line/field-key (0.002904 sec) + passed 11/20 snakemake-test-indent-line/field-value (0.003454 sec) + passed 12/20 snakemake-test-indent-line/outside-rule (0.000555 sec) + passed 13/20 snakemake-test-indent-line/toplevel-command (0.001057 sec) + passed 14/20 snakemake-test-org-link-file-targets (0.836105 sec) + passed 15/20 snakemake-test-region-file-targets (0.000288 sec) + passed 16/20 snakemake-test-rule-at-point (1.704109 sec) + passed 17/20 snakemake-test-rule-targets (0.356299 sec) + passed 18/20 snakemake-test-snakefile-directory (0.000520 sec) + passed 19/20 snakemake-test-split-lines (0.000169 sec) + passed 20/20 snakemake-test/indent-region (0.002485 sec) -Ran 20 tests, 20 results as expected, 0 unexpected (2025-12-20 16:14:44-1200, 8.196089 sec) +Ran 20 tests, 20 results as expected, 0 unexpected (2024-11-18 11:54:20+1400, 14.375765 sec) make[1]: Leaving directory '/build/reproducible-path/elpa-snakemake-2.0.0+git20231210.4ad41da' create-stamp debian/debhelper-build-stamp @@ -1257,12 +1286,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1088878/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1088878/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/464363 and its subdirectories -I: Current time: Sat Dec 20 16:14:49 -12 2025 -I: pbuilder-time-stamp: 1766290489 +I: removing directory /srv/workspace/pbuilder/1088878 and its subdirectories +I: Current time: Mon Nov 18 11:54:26 +14 2024 +I: pbuilder-time-stamp: 1731880466