Diff of the two buildlogs: -- --- b1/build.log 2024-05-09 12:38:29.665456889 +0000 +++ b2/build.log 2024-05-09 12:39:43.494315419 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu May 9 00:32:48 -12 2024 -I: pbuilder-time-stamp: 1715257968 +I: Current time: Thu Jun 12 09:01:33 +14 2025 +I: pbuilder-time-stamp: 1749668493 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -28,52 +28,84 @@ dpkg-source: info: applying use-archive-xopen.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/419441/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/4167949/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jun 11 19:01 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/4167949/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/4167949/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='52544fd88a4b4dc4a6590239a21d2df9' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='419441' - PS1='# ' - PS2='> ' + INVOCATION_ID=5436c5fe56db4181a0c2366058a53c49 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=4167949 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZC4vtQTL/pbuilderrc_xNqm --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZC4vtQTL/b1 --logfile b1/build.log vcfanno_0.3.5+ds-2.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZC4vtQTL/pbuilderrc_z6Uy --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZC4vtQTL/b2 --logfile b2/build.log vcfanno_0.3.5+ds-2.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos11-amd64 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 7 11:25 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/419441/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Jun 10 17:46 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/4167949/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -220,7 +252,7 @@ Get: 83 http://deb.debian.org/debian trixie/main amd64 libncurses6 amd64 6.4+20240414-1 [104 kB] Get: 84 http://deb.debian.org/debian trixie/main amd64 samtools amd64 1.19.2-1+b1 [645 kB] Get: 85 http://deb.debian.org/debian trixie/main amd64 tabix amd64 1.19+ds-1.1+b1 [476 kB] -Fetched 114 MB in 9s (12.4 MB/s) +Fetched 114 MB in 1s (92.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19699 files and directories currently installed.) @@ -575,7 +607,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/vcfanno-0.3.5+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../vcfanno_0.3.5+ds-2_source.changes +I: user script /srv/workspace/pbuilder/4167949/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/4167949/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/vcfanno-0.3.5+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../vcfanno_0.3.5+ds-2_source.changes dpkg-buildpackage: info: source package vcfanno dpkg-buildpackage: info: source version 0.3.5+ds-2 dpkg-buildpackage: info: source distribution unstable @@ -598,35 +634,35 @@ dh_autoreconf -O--buildsystem=golang dh_auto_configure -O--buildsystem=golang dh_auto_build -O--buildsystem=golang - cd obj-x86_64-linux-gnu && go install -trimpath -v -p 20 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared -internal/goarch -internal/race + cd obj-x86_64-linux-gnu && go install -trimpath -v -p 42 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared +encoding +crypto/internal/alias +cmp +vendor/golang.org/x/crypto/internal/alias +internal/nettrace +vendor/golang.org/x/crypto/cryptobyte/asn1 +internal/unsafeheader internal/godebugs -internal/goexperiment -container/list unicode/utf16 -log/internal +container/list internal/coverage/rtcov -cmp -unicode -internal/goos -unicode/utf8 -internal/cpu -runtime/internal/atomic -sync/atomic +internal/goarch internal/itoa -encoding -runtime/internal/syscall -internal/unsafeheader +internal/race +crypto/internal/boring/sig +log/internal +internal/goexperiment math/bits -crypto/internal/alias crypto/subtle -crypto/internal/boring/sig -internal/nettrace -vendor/golang.org/x/crypto/internal/alias -internal/chacha8rand -vendor/golang.org/x/crypto/cryptobyte/asn1 +unicode/utf8 +sync/atomic +internal/goos +runtime/internal/syscall +internal/cpu +runtime/internal/atomic +unicode runtime/internal/math +internal/chacha8rand internal/abi runtime/internal/sys slices @@ -635,131 +671,131 @@ runtime internal/reflectlite sync +internal/singleflight internal/testlog internal/bisect -internal/singleflight runtime/cgo internal/godebug errors sort -strconv io -internal/oserror -path internal/intern -internal/safefilepath -crypto/internal/nistec/fiat math/rand -vendor/golang.org/x/net/dns/dnsmessage -syscall -strings +strconv +internal/oserror +internal/safefilepath +path +container/heap +crypto/internal/randutil bytes +crypto/rc4 hash -crypto/internal/randutil -container/heap +vendor/golang.org/x/net/dns/dnsmessage +strings +net/netip +reflect +crypto/internal/nistec/fiat +syscall +crypto hash/crc32 vendor/golang.org/x/text/transform -github.com/brentp/irelate/interfaces -bufio net/http/internal/ascii -crypto +bufio +github.com/brentp/irelate/interfaces regexp/syntax -crypto/rc4 -net/netip -reflect regexp -internal/syscall/unix internal/syscall/execenv +internal/syscall/unix time -internal/poll -context github.com/BurntSushi/toml/internal +context io/fs -embed +internal/poll internal/fmtsort encoding/binary +embed encoding/base64 crypto/cipher crypto/internal/edwards25519/field +os crypto/md5 -crypto/internal/nistec vendor/golang.org/x/crypto/internal/poly1305 -os -encoding/pem -crypto/internal/boring +crypto/internal/nistec crypto/des vendor/golang.org/x/crypto/chacha20 -crypto/aes -crypto/sha512 -crypto/hmac -crypto/sha1 -crypto/sha256 -crypto/internal/edwards25519 -vendor/golang.org/x/crypto/hkdf -crypto/ecdh +crypto/internal/boring io/ioutil -fmt path/filepath +fmt vendor/golang.org/x/sys/cpu -net +encoding/pem +crypto/hmac +crypto/sha512 +crypto/aes +crypto/sha256 +crypto/sha1 +vendor/golang.org/x/crypto/hkdf vendor/golang.org/x/crypto/chacha20poly1305 -os/exec flag encoding/hex -encoding/csv -github.com/yuin/gopher-lua/ast github.com/yuin/gopher-lua/pm -encoding/json -log -github.com/pkg/errors +net/http/internal +github.com/yuin/gopher-lua/ast +mime/quotedprintable +crypto/internal/edwards25519 net/url -vendor/golang.org/x/text/unicode/norm +compress/flate vendor/golang.org/x/net/http2/hpack -math/big mime -mime/quotedprintable -net/http/internal -os/user -compress/flate -github.com/yuin/gopher-lua/parse +log +encoding/json +github.com/pkg/errors +encoding/csv +os/exec +math/big +vendor/golang.org/x/text/unicode/norm +crypto/ecdh github.com/brentp/vcfgo vendor/golang.org/x/text/unicode/bidi +github.com/yuin/gopher-lua/parse compress/gzip github.com/klauspost/compress/flate github.com/yuin/gopher-lua -github.com/biogo/hts/bgzf vendor/golang.org/x/text/secure/bidirule -github.com/biogo/hts/bgzf/index github.com/BurntSushi/toml -github.com/biogo/hts/internal -github.com/biogo/hts/csi -github.com/biogo/hts/tabix -github.com/biogo/hts/sam +github.com/biogo/hts/bgzf vendor/golang.org/x/net/idna +github.com/biogo/hts/bgzf/index +github.com/biogo/hts/csi +github.com/biogo/hts/internal +github.com/klauspost/pgzip +crypto/internal/boring/bbig +crypto/dsa crypto/rand crypto/elliptic crypto/internal/bigmod encoding/asn1 -crypto/dsa -crypto/internal/boring/bbig +github.com/biogo/hts/tabix +github.com/biogo/hts/sam crypto/ed25519 crypto/rsa -github.com/klauspost/pgzip -github.com/biogo/hts/bam crypto/x509/pkix vendor/golang.org/x/crypto/cryptobyte +github.com/biogo/hts/bam +github.com/yuin/gluare +crypto/ecdsa github.com/brentp/irelate/parsers +github.com/brentp/goluaez github.com/brentp/bix -crypto/ecdsa github.com/brentp/irelate -github.com/yuin/gluare -github.com/brentp/goluaez github.com/brentp/vcfanno/api +os/user +net vendor/golang.org/x/net/http/httpproxy net/textproto crypto/x509 -mime/multipart vendor/golang.org/x/net/http/httpguts +mime/multipart crypto/tls net/http/httptrace net/http @@ -767,14 +803,14 @@ github.com/brentp/vcfanno/shared github.com/brentp/vcfanno dh_auto_test -O--buildsystem=golang - cd obj-x86_64-linux-gnu && go test -vet=off -v -p 20 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared + cd obj-x86_64-linux-gnu && go test -vet=off -v -p 42 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared ? github.com/brentp/vcfanno/shared [no test files] testing: warning: no tests to run PASS -ok github.com/brentp/vcfanno 0.082s [no tests to run] +ok github.com/brentp/vcfanno 0.005s [no tests to run] === RUN Test OK: 13 passed ---- PASS: Test (0.41s) +--- PASS: Test (0.01s) === RUN TestHandleA --- PASS: TestHandleA (0.00s) === RUN TestHandlAMulti @@ -782,7 +818,7 @@ === RUN TestByAlt --- PASS: TestByAlt (0.00s) PASS -ok github.com/brentp/vcfanno/api 0.446s +ok github.com/brentp/vcfanno/api 0.017s create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=golang dh_prep -O--buildsystem=golang @@ -899,9 +935,9 @@ dpkg-gencontrol: warning: package vcfanno: substitution variable ${misc:Static-Built-Using} unused, but is defined dh_md5sums -O--buildsystem=golang dh_builddeb -O--buildsystem=golang +dpkg-deb: building package 'vcfanno' in '../vcfanno_0.3.5+ds-2_amd64.deb'. dpkg-deb: building package 'vcfanno-dbgsym' in '../vcfanno-dbgsym_0.3.5+ds-2_amd64.deb'. dpkg-deb: building package 'vcfanno-examples' in '../vcfanno-examples_0.3.5+ds-2_all.deb'. -dpkg-deb: building package 'vcfanno' in '../vcfanno_0.3.5+ds-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../vcfanno_0.3.5+ds-2_amd64.buildinfo dpkg-genchanges --build=binary -O../vcfanno_0.3.5+ds-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -909,12 +945,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/4167949/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/4167949/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/419441 and its subdirectories -I: Current time: Thu May 9 00:38:28 -12 2024 -I: pbuilder-time-stamp: 1715258308 +I: removing directory /srv/workspace/pbuilder/4167949 and its subdirectories +I: Current time: Thu Jun 12 09:02:42 +14 2025 +I: pbuilder-time-stamp: 1749668562