Diff of the two buildlogs: -- --- b1/build.log 2024-04-27 02:18:05.112293028 +0000 +++ b2/build.log 2024-04-27 02:19:49.591843752 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu May 29 20:38:52 -12 2025 -I: pbuilder-time-stamp: 1748594332 +I: Current time: Sat Apr 27 16:18:07 +14 2024 +I: pbuilder-time-stamp: 1714184287 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -29,51 +29,83 @@ dpkg-source: info: applying shared_and_static.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/947034/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2098299/tmp/hooks/D01_modify_environment starting +debug: Running on infom01-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 27 02:18 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2098299/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2098299/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='3dc50dd49a9242d3bdd0ac6401b7514a' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='947034' - PS1='# ' - PS2='> ' + INVOCATION_ID=6dd26ae3350447bca085998b2ba50e01 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2098299 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.pl6SXdYD/pbuilderrc_9Qux --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.pl6SXdYD/b1 --logfile b1/build.log spoa_4.1.4-1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.pl6SXdYD/pbuilderrc_I43i --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.pl6SXdYD/b2 --logfile b2/build.log spoa_4.1.4-1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom02-amd64 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-20-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 24 13:34 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/947034/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Apr 23 11:24 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2098299/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -222,7 +254,7 @@ Get: 57 http://deb.debian.org/debian trixie/main amd64 libcpu-features-dev amd64 0.9.0-1+b1 [22.0 kB] Get: 58 http://deb.debian.org/debian trixie/main amd64 libgtest-dev amd64 1.14.0-1+b1 [250 kB] Get: 59 http://deb.debian.org/debian trixie/main amd64 libsimde-dev all 0.8.0-1 [458 kB] -Fetched 39.6 MB in 1s (32.3 MB/s) +Fetched 39.6 MB in 0s (102 MB/s) debconf: delaying package configuration, since apt-utils is not installed dpkg: libssl3:amd64: dependency problems, but removing anyway as you requested: libkrb5-3:amd64 depends on libssl3 (>= 3.0.0). @@ -480,7 +512,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/spoa-4.1.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../spoa_4.1.4-1_source.changes +I: user script /srv/workspace/pbuilder/2098299/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/2098299/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/spoa-4.1.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../spoa_4.1.4-1_source.changes dpkg-buildpackage: info: source package spoa dpkg-buildpackage: info: source version 4.1.4-1 dpkg-buildpackage: info: source distribution unstable @@ -505,7 +541,7 @@ -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done --- Configuring done (0.6s) +-- Configuring done (0.4s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -524,36 +560,36 @@ /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' -make -f CMakeFiles/spoa_sse2.dir/build.make CMakeFiles/spoa_sse2.dir/depend -make[3]: Entering directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' -cd /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/spoa-4.1.4 /build/reproducible-path/spoa-4.1.4 /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu/CMakeFiles/spoa_sse2.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' -make -f CMakeFiles/spoa_sse2.dir/build.make CMakeFiles/spoa_sse2.dir/build -make[3]: Entering directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' -[ 5%] Building CXX object CMakeFiles/spoa_sse2.dir/src/simd_alignment_engine_dispatch.cpp.o -/usr/bin/c++ -DSIMDE_ENABLE_NATIVE_ALIASES -DSIMDE_ENABLE_OPENMP -DSIMDE_NO_NATIVE -DSPOA_GENERATE_DISPATCH -DSPOA_USE_SIMDE -I/build/reproducible-path/spoa-4.1.4/include -I/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu/_deps/simde-src -g -O2 -ffile-prefix-map=/build/reproducible-path/spoa-4.1.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -fopenmp-simd -O3 -DNDEBUG -std=c++17 -msse2 -MD -MT CMakeFiles/spoa_sse2.dir/src/simd_alignment_engine_dispatch.cpp.o -MF CMakeFiles/spoa_sse2.dir/src/simd_alignment_engine_dispatch.cpp.o.d -o CMakeFiles/spoa_sse2.dir/src/simd_alignment_engine_dispatch.cpp.o -c /build/reproducible-path/spoa-4.1.4/src/simd_alignment_engine_dispatch.cpp -make[3]: Leaving directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' -[ 5%] Built target spoa_sse2 make -f CMakeFiles/spoa_avx2.dir/build.make CMakeFiles/spoa_avx2.dir/depend make[3]: Entering directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' cd /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/spoa-4.1.4 /build/reproducible-path/spoa-4.1.4 /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu/CMakeFiles/spoa_avx2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' make -f CMakeFiles/spoa_avx2.dir/build.make CMakeFiles/spoa_avx2.dir/build make[3]: Entering directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' -[ 11%] Building CXX object CMakeFiles/spoa_avx2.dir/src/simd_alignment_engine_dispatch.cpp.o +[ 5%] Building CXX object CMakeFiles/spoa_avx2.dir/src/simd_alignment_engine_dispatch.cpp.o /usr/bin/c++ -DSIMDE_ENABLE_NATIVE_ALIASES -DSIMDE_ENABLE_OPENMP -DSIMDE_NO_NATIVE -DSPOA_GENERATE_DISPATCH -DSPOA_USE_SIMDE -I/build/reproducible-path/spoa-4.1.4/include -I/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu/_deps/simde-src -g -O2 -ffile-prefix-map=/build/reproducible-path/spoa-4.1.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -fopenmp-simd -O3 -DNDEBUG -std=c++17 -mavx2 -MD -MT CMakeFiles/spoa_avx2.dir/src/simd_alignment_engine_dispatch.cpp.o -MF CMakeFiles/spoa_avx2.dir/src/simd_alignment_engine_dispatch.cpp.o.d -o CMakeFiles/spoa_avx2.dir/src/simd_alignment_engine_dispatch.cpp.o -c /build/reproducible-path/spoa-4.1.4/src/simd_alignment_engine_dispatch.cpp make[3]: Leaving directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' -[ 11%] Built target spoa_avx2 +[ 5%] Built target spoa_avx2 make -f CMakeFiles/spoa_sse4.1.dir/build.make CMakeFiles/spoa_sse4.1.dir/depend make[3]: Entering directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' cd /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/spoa-4.1.4 /build/reproducible-path/spoa-4.1.4 /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu/CMakeFiles/spoa_sse4.1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' make -f CMakeFiles/spoa_sse4.1.dir/build.make CMakeFiles/spoa_sse4.1.dir/build make[3]: Entering directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' -[ 17%] Building CXX object CMakeFiles/spoa_sse4.1.dir/src/simd_alignment_engine_dispatch.cpp.o +[ 11%] Building CXX object CMakeFiles/spoa_sse4.1.dir/src/simd_alignment_engine_dispatch.cpp.o /usr/bin/c++ -DSIMDE_ENABLE_NATIVE_ALIASES -DSIMDE_ENABLE_OPENMP -DSIMDE_NO_NATIVE -DSPOA_GENERATE_DISPATCH -DSPOA_USE_SIMDE -I/build/reproducible-path/spoa-4.1.4/include -I/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu/_deps/simde-src -g -O2 -ffile-prefix-map=/build/reproducible-path/spoa-4.1.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -fopenmp-simd -O3 -DNDEBUG -std=c++17 -msse4.1 -MD -MT CMakeFiles/spoa_sse4.1.dir/src/simd_alignment_engine_dispatch.cpp.o -MF CMakeFiles/spoa_sse4.1.dir/src/simd_alignment_engine_dispatch.cpp.o.d -o CMakeFiles/spoa_sse4.1.dir/src/simd_alignment_engine_dispatch.cpp.o -c /build/reproducible-path/spoa-4.1.4/src/simd_alignment_engine_dispatch.cpp make[3]: Leaving directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' -[ 17%] Built target spoa_sse4.1 +[ 11%] Built target spoa_sse4.1 +make -f CMakeFiles/spoa_sse2.dir/build.make CMakeFiles/spoa_sse2.dir/depend +make[3]: Entering directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' +cd /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/spoa-4.1.4 /build/reproducible-path/spoa-4.1.4 /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu/CMakeFiles/spoa_sse2.dir/DependInfo.cmake "--color=" +make[3]: Leaving directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' +make -f CMakeFiles/spoa_sse2.dir/build.make CMakeFiles/spoa_sse2.dir/build +make[3]: Entering directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' +[ 17%] Building CXX object CMakeFiles/spoa_sse2.dir/src/simd_alignment_engine_dispatch.cpp.o +/usr/bin/c++ -DSIMDE_ENABLE_NATIVE_ALIASES -DSIMDE_ENABLE_OPENMP -DSIMDE_NO_NATIVE -DSPOA_GENERATE_DISPATCH -DSPOA_USE_SIMDE -I/build/reproducible-path/spoa-4.1.4/include -I/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu/_deps/simde-src -g -O2 -ffile-prefix-map=/build/reproducible-path/spoa-4.1.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -fopenmp-simd -O3 -DNDEBUG -std=c++17 -msse2 -MD -MT CMakeFiles/spoa_sse2.dir/src/simd_alignment_engine_dispatch.cpp.o -MF CMakeFiles/spoa_sse2.dir/src/simd_alignment_engine_dispatch.cpp.o.d -o CMakeFiles/spoa_sse2.dir/src/simd_alignment_engine_dispatch.cpp.o -c /build/reproducible-path/spoa-4.1.4/src/simd_alignment_engine_dispatch.cpp +make[3]: Leaving directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' +[ 17%] Built target spoa_sse2 make -f CMakeFiles/spoa.dir/build.make CMakeFiles/spoa.dir/depend make[3]: Entering directory '/build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu' cd /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/spoa-4.1.4 /build/reproducible-path/spoa-4.1.4 /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu /build/reproducible-path/spoa-4.1.4/obj-x86_64-linux-gnu/CMakeFiles/spoa.dir/DependInfo.cmake "--color=" @@ -641,47 +677,47 @@ [----------] 19 tests from SpoaTest [ RUN ] SpoaTest.Clear -[ OK ] SpoaTest.Clear (86 ms) +[ OK ] SpoaTest.Clear (111 ms) [ RUN ] SpoaTest.Local -[ OK ] SpoaTest.Local (45 ms) +[ OK ] SpoaTest.Local (43 ms) [ RUN ] SpoaTest.LocalAffine -[ OK ] SpoaTest.LocalAffine (66 ms) +[ OK ] SpoaTest.LocalAffine (62 ms) [ RUN ] SpoaTest.LocalConvex -[ OK ] SpoaTest.LocalConvex (76 ms) +[ OK ] SpoaTest.LocalConvex (70 ms) [ RUN ] SpoaTest.LocalWithQualities -[ OK ] SpoaTest.LocalWithQualities (44 ms) +[ OK ] SpoaTest.LocalWithQualities (41 ms) [ RUN ] SpoaTest.LocalAffineWithQualities -[ OK ] SpoaTest.LocalAffineWithQualities (64 ms) +[ OK ] SpoaTest.LocalAffineWithQualities (62 ms) [ RUN ] SpoaTest.LocalConvexWithQualities -[ OK ] SpoaTest.LocalConvexWithQualities (77 ms) +[ OK ] SpoaTest.LocalConvexWithQualities (70 ms) [ RUN ] SpoaTest.Global -[ OK ] SpoaTest.Global (43 ms) +[ OK ] SpoaTest.Global (40 ms) [ RUN ] SpoaTest.GlobalAffine -[ OK ] SpoaTest.GlobalAffine (63 ms) +[ OK ] SpoaTest.GlobalAffine (60 ms) [ RUN ] SpoaTest.GlobalConvex -[ OK ] SpoaTest.GlobalConvex (73 ms) +[ OK ] SpoaTest.GlobalConvex (68 ms) [ RUN ] SpoaTest.GlobalWithQualities -[ OK ] SpoaTest.GlobalWithQualities (42 ms) +[ OK ] SpoaTest.GlobalWithQualities (40 ms) [ RUN ] SpoaTest.GlobalAffineWithQualities -[ OK ] SpoaTest.GlobalAffineWithQualities (64 ms) +[ OK ] SpoaTest.GlobalAffineWithQualities (60 ms) [ RUN ] SpoaTest.GlobalConvexWithQualities -[ OK ] SpoaTest.GlobalConvexWithQualities (72 ms) +[ OK ] SpoaTest.GlobalConvexWithQualities (68 ms) [ RUN ] SpoaTest.SemiGlobal -[ OK ] SpoaTest.SemiGlobal (42 ms) +[ OK ] SpoaTest.SemiGlobal (40 ms) [ RUN ] SpoaTest.SemiGlobalAffine -[ OK ] SpoaTest.SemiGlobalAffine (63 ms) +[ OK ] SpoaTest.SemiGlobalAffine (60 ms) [ RUN ] SpoaTest.SemiGlobalConvex -[ OK ] SpoaTest.SemiGlobalConvex (71 ms) +[ OK ] SpoaTest.SemiGlobalConvex (68 ms) [ RUN ] SpoaTest.SemiGlobalWithQualities -[ OK ] SpoaTest.SemiGlobalWithQualities (41 ms) +[ OK ] SpoaTest.SemiGlobalWithQualities (40 ms) [ RUN ] SpoaTest.SemiGlobalAffineWithQualities -[ OK ] SpoaTest.SemiGlobalAffineWithQualities (63 ms) +[ OK ] SpoaTest.SemiGlobalAffineWithQualities (60 ms) [ RUN ] SpoaTest.SemiGlobalConvexWithQualities -[ OK ] SpoaTest.SemiGlobalConvexWithQualities (71 ms) -[----------] 19 tests from SpoaTest (1181 ms total) +[ OK ] SpoaTest.SemiGlobalConvexWithQualities (68 ms) +[----------] 19 tests from SpoaTest (1143 ms total) [----------] Global test environment tear-down -[==========] 22 tests from 2 test suites ran. (1181 ms total) +[==========] 22 tests from 2 test suites ran. (1145 ms total) [ PASSED ] 22 tests. `find . -name spoa | grep bin` test/data/sample.fastq.gz >Consensus LN:i:495 @@ -706,9 +742,9 @@ -- Installing: /build/reproducible-path/spoa-4.1.4/debian/tmp/usr/lib/x86_64-linux-gnu/libspoa_static.a -- Installing: /build/reproducible-path/spoa-4.1.4/debian/tmp/usr/include/spoa -- Installing: /build/reproducible-path/spoa-4.1.4/debian/tmp/usr/include/spoa/graph.hpp --- Installing: /build/reproducible-path/spoa-4.1.4/debian/tmp/usr/include/spoa/spoa.hpp -- Installing: /build/reproducible-path/spoa-4.1.4/debian/tmp/usr/include/spoa/alignment_engine.hpp -- Installing: /build/reproducible-path/spoa-4.1.4/debian/tmp/usr/include/spoa/version.hpp +-- Installing: /build/reproducible-path/spoa-4.1.4/debian/tmp/usr/include/spoa/spoa.hpp -- Installing: /build/reproducible-path/spoa-4.1.4/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/spoa/spoaTargets.cmake -- Installing: /build/reproducible-path/spoa-4.1.4/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/spoa/spoaTargets-release.cmake -- Installing: /build/reproducible-path/spoa-4.1.4/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/spoa/spoaConfig.cmake @@ -756,7 +792,7 @@ dh_makeshlibs -a -O--no-parallel dpkg-gensymbols: warning: debian/libspoa7.0.0/DEBIAN/symbols doesn't match completely debian/libspoa7.0.0.symbols.amd64 --- debian/libspoa7.0.0.symbols.amd64 (libspoa7.0.0_4.1.4-1_amd64) -+++ dpkg-gensymbolsV2bUIz 2025-05-30 08:41:00.344919648 +0000 ++++ dpkg-gensymbols2Z303A 2024-04-27 02:19:45.688711648 +0000 @@ -28,8 +28,8 @@ GetXCR0Eax@Base 4.0.7 StackLineReader_Initialize@Base 4.0.7 @@ -838,11 +874,11 @@ dpkg-gencontrol: warning: Depends field of package libspoa-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--no-parallel dh_builddeb -O--no-parallel -dpkg-deb: building package 'spoa-dbgsym' in '../spoa-dbgsym_4.1.4-1_amd64.deb'. dpkg-deb: building package 'spoa' in '../spoa_4.1.4-1_amd64.deb'. -dpkg-deb: building package 'libspoa-dev' in '../libspoa-dev_4.1.4-1_amd64.deb'. +dpkg-deb: building package 'spoa-dbgsym' in '../spoa-dbgsym_4.1.4-1_amd64.deb'. dpkg-deb: building package 'libspoa7.0.0' in '../libspoa7.0.0_4.1.4-1_amd64.deb'. dpkg-deb: building package 'libspoa7.0.0-dbgsym' in '../libspoa7.0.0-dbgsym_4.1.4-1_amd64.deb'. +dpkg-deb: building package 'libspoa-dev' in '../libspoa-dev_4.1.4-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../spoa_4.1.4-1_amd64.buildinfo dpkg-genchanges --build=binary -O../spoa_4.1.4-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -850,12 +886,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2098299/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2098299/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/947034 and its subdirectories -I: Current time: Thu May 29 20:41:04 -12 2025 -I: pbuilder-time-stamp: 1748594464 +I: removing directory /srv/workspace/pbuilder/2098299 and its subdirectories +I: Current time: Sat Apr 27 16:19:48 +14 2024 +I: pbuilder-time-stamp: 1714184388