Diff of the two buildlogs: -- --- b1/build.log 2024-11-14 05:36:50.926947187 +0000 +++ b2/build.log 2024-11-14 05:51:35.543252553 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue Dec 16 23:54:47 -12 2025 -I: pbuilder-time-stamp: 1765972487 +I: Current time: Thu Nov 14 19:36:54 +14 2024 +I: pbuilder-time-stamp: 1731562614 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -29,52 +29,84 @@ dpkg-source: info: applying create_doc_without_previous_binary_build.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3624419/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2943108/tmp/hooks/D01_modify_environment starting +debug: Running on ionos1-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 14 05:37 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2943108/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2943108/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='304d209cd0dc4bd38c6cd2d46af3af47' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3624419' - PS1='# ' - PS2='> ' + INVOCATION_ID=971a996c1f24433b988baf86ffbec60c + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2943108 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zMlycmFd/pbuilderrc_w8yq --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zMlycmFd/b1 --logfile b1/build.log seqan-needle_1.0.3+ds-1.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zMlycmFd/pbuilderrc_8pcn --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zMlycmFd/b2 --logfile b2/build.log seqan-needle_1.0.3+ds-1.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos15-amd64 6.10.11+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.11-1~bpo12+1 (2024-10-03) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3624419/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2943108/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -206,7 +238,7 @@ Get: 76 http://deb.debian.org/debian trixie/main amd64 libseqan3-dev all 3.3.0+ds-2 [758 kB] Get: 77 http://deb.debian.org/debian trixie/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get: 78 http://deb.debian.org/debian trixie/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] -Fetched 112 MB in 7s (15.5 MB/s) +Fetched 112 MB in 7s (16.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19972 files and directories currently installed.) @@ -533,7 +565,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/seqan-needle-1.0.3+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../seqan-needle_1.0.3+ds-1_source.changes +I: user script /srv/workspace/pbuilder/2943108/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/2943108/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/seqan-needle-1.0.3+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../seqan-needle_1.0.3+ds-1_source.changes dpkg-buildpackage: info: source package seqan-needle dpkg-buildpackage: info: source version 1.0.3+ds-1 dpkg-buildpackage: info: source distribution unstable @@ -586,7 +622,7 @@ -- You can run `make tests` to build tests. -- You can run `make test` to run tests. -- You can run `make check` to build and run tests. --- Configuring done (7.2s) +-- Configuring done (22.2s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: @@ -606,7 +642,7 @@ debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds' dh_auto_build --arch -- tests - cd obj-x86_64-linux-gnu && make -j42 "INSTALL=install --strip-program=true" tests VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j20 "INSTALL=install --strip-program=true" tests VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/CMakeFiles/VerifyGlobs.cmake /usr/bin/cmake -S/build/reproducible-path/seqan-needle-1.0.3+ds -B/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 @@ -623,8 +659,8 @@ make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' make -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +[ 3%] Building CXX object src/CMakeFiles/needle_lib.dir/estimate.cpp.o [ 6%] Building CXX object src/CMakeFiles/needle_lib.dir/ibf.cpp.o -[ 6%] Building CXX object src/CMakeFiles/needle_lib.dir/estimate.cpp.o cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle_lib.dir/estimate.cpp.o -MF CMakeFiles/needle_lib.dir/estimate.cpp.o.d -o CMakeFiles/needle_lib.dir/estimate.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/src/estimate.cpp cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle_lib.dir/ibf.cpp.o -MF CMakeFiles/needle_lib.dir/ibf.cpp.o.d -o CMakeFiles/needle_lib.dir/ibf.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/src/ibf.cpp [ 9%] Linking CXX static library ../lib/libneedle_lib.a @@ -648,174 +684,174 @@ make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' [ 16%] Built target needle make -f test/cli/CMakeFiles/delete_options_test.dir/build.make test/cli/CMakeFiles/delete_options_test.dir/depend -make -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/depend -make -f test/api/CMakeFiles/insert_delete_test.dir/build.make test/api/CMakeFiles/insert_delete_test.dir/depend -make -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/depend -make -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/depend make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/depend cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/delete_options_test.dir/DependInfo.cmake "--color=" -make -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/depend -make -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/depend -make -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/depend make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/api/CMakeFiles/insert_delete_test.dir/build.make test/api/CMakeFiles/insert_delete_test.dir/depend +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/count_test.dir/DependInfo.cmake "--color=" make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/depend +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/insert_delete_test.dir/DependInfo.cmake "--color=" make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/depend cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/estimate_test.dir/DependInfo.cmake "--color=" -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/insert_delete_test.dir/DependInfo.cmake "--color=" -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/count_test.dir/DependInfo.cmake "--color=" -make -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/depend make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/ibf_test.dir/DependInfo.cmake "--color=" -make -f test/cli/CMakeFiles/insert_options_test.dir/build.make test/cli/CMakeFiles/insert_options_test.dir/depend +make -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/depend make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/depend cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/ibfmin_test.dir/DependInfo.cmake "--color=" -make -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/depend -make -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/depend +make -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/depend +make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/minimiser_test.dir/DependInfo.cmake "--color=" make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/needle_options_test.dir/DependInfo.cmake "--color=" -make -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/depend +make -f test/cli/CMakeFiles/delete_options_test.dir/build.make test/cli/CMakeFiles/delete_options_test.dir/build +make -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/depend make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/minimiser_test.dir/DependInfo.cmake "--color=" make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/cli/CMakeFiles/insert_options_test.dir/build.make test/cli/CMakeFiles/insert_options_test.dir/depend cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/ibf_options_test.dir/DependInfo.cmake "--color=" +make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/build make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/insert_options_test.dir/DependInfo.cmake "--color=" make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/minimiser_options_test.dir/DependInfo.cmake "--color=" -make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/estimate_options_test.dir/DependInfo.cmake "--color=" -make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/count_options_test.dir/DependInfo.cmake "--color=" -make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make -f test/cli/CMakeFiles/delete_options_test.dir/build.make test/cli/CMakeFiles/delete_options_test.dir/build -make -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/build -make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/build make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' make -f test/api/CMakeFiles/insert_delete_test.dir/build.make test/api/CMakeFiles/insert_delete_test.dir/build -make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/build make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/build +make -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/build make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/build +make -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/depend make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make -f test/cli/CMakeFiles/insert_options_test.dir/build.make test/cli/CMakeFiles/insert_options_test.dir/build make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/minimiser_options_test.dir/DependInfo.cmake "--color=" make -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/build make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/build -make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +[ 19%] Building CXX object test/cli/CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -MF CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o.d -o CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli/delete_options_test.cpp make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/build make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/build +make -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/build +make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/build make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/build make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -make -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/build +make -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/build +[ 22%] Building CXX object test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/depend +make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/cli/CMakeFiles/insert_options_test.dir/build.make test/cli/CMakeFiles/insert_options_test.dir/build make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/estimate_options_test.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o -MF CMakeFiles/estimate_test.dir/estimate_test.cpp.o.d -o CMakeFiles/estimate_test.dir/estimate_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/api/estimate_test.cpp +[ 25%] Building CXX object test/api/CMakeFiles/count_test.dir/count_test.cpp.o make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/depend +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/count_test.dir/count_test.cpp.o -MF CMakeFiles/count_test.dir/count_test.cpp.o.d -o CMakeFiles/count_test.dir/count_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/api/count_test.cpp make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -[ 25%] Building CXX object test/api/CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -[ 25%] Building CXX object test/cli/CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -[ 25%] Building CXX object test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -[ 29%] Building CXX object test/api/CMakeFiles/count_test.dir/count_test.cpp.o -[ 32%] Building CXX object test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o +[ 29%] Building CXX object test/api/CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/count_options_test.dir/DependInfo.cmake "--color=" +[ 32%] Building CXX object test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o +[ 35%] Building CXX object test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -MF CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o.d -o CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/api/minimiser_test.cpp +make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -MF CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o.d -o CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/api/insert_delete_test.cpp -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -MF CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o.d -o CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/api/ibfmin_test.cpp -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -MF CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o.d -o CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli/delete_options_test.cpp -[ 38%] Building CXX object test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o -[ 38%] Building CXX object test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/count_test.dir/count_test.cpp.o -MF CMakeFiles/count_test.dir/count_test.cpp.o.d -o CMakeFiles/count_test.dir/count_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/api/count_test.cpp -[ 41%] Building CXX object test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -MF CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o.d -o CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli/ibf_options_test.cpp -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o -MF CMakeFiles/estimate_test.dir/estimate_test.cpp.o.d -o CMakeFiles/estimate_test.dir/estimate_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/api/estimate_test.cpp +make -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/build cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o -MF CMakeFiles/ibf_test.dir/ibf_test.cpp.o.d -o CMakeFiles/ibf_test.dir/ibf_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/api/ibf_test.cpp -[ 48%] Building CXX object test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -[ 48%] Building CXX object test/cli/CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o +make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +[ 38%] Building CXX object test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o +[ 41%] Building CXX object test/cli/CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -MF CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o.d -o CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/api/ibfmin_test.cpp +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -MF CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o.d -o CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli/insert_options_test.cpp +[ 45%] Building CXX object test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o +make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/build +[ 48%] Building CXX object test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -MF CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o.d -o CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli/needle_options_test.cpp +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -MF CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o.d -o CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli/ibf_options_test.cpp +make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/build +make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' [ 51%] Building CXX object test/cli/CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -[ 54%] Building CXX object test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -MF CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o.d -o CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli/estimate_options_test.cpp -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -MF CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o.d -o CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli/insert_options_test.cpp cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -MF CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o.d -o CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli/minimiser_options_test.cpp -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -MF CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o.d -o CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/api/minimiser_test.cpp +[ 54%] Building CXX object test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -MF CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o.d -o CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli/estimate_options_test.cpp [ 58%] Building CXX object test/cli/CMakeFiles/count_options_test.dir/count_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DAPPNAME=\"needle\" -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.3+ds/src/../include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -isystem /build/reproducible-path/seqan-needle-1.0.3+ds/vendor/robin-hood/1c87b2a63d3c9a4c89a4da9d2468db0e82ddd789/src/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Werror -pedantic -Wall -Wextra -Wnrvo -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/count_options_test.dir/count_options_test.cpp.o -MF CMakeFiles/count_options_test.dir/count_options_test.cpp.o.d -o CMakeFiles/count_options_test.dir/count_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.3+ds/test/cli/count_options_test.cpp [ 61%] Linking CXX executable ../../needle_options_test cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -o ../../needle_options_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a [ 64%] Linking CXX executable ../../count_options_test -[ 67%] Linking CXX executable ../../minimiser_options_test cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_options_test.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/count_options_test.dir/count_options_test.cpp.o -o ../../count_options_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a +[ 67%] Linking CXX executable ../../minimiser_options_test cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/minimiser_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -o ../../minimiser_options_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/count_options_test.dir/count_options_test.cpp.o -o ../../count_options_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a [ 70%] Linking CXX executable ../../ibf_options_test cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -o ../../ibf_options_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' [ 70%] Built target needle_options_test make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -[ 70%] Built target ibf_options_test -make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' [ 70%] Built target count_options_test make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' [ 70%] Built target minimiser_options_test -[ 74%] Linking CXX executable ../../count_test -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_test.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/count_test.dir/count_test.cpp.o -o ../../count_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a -[ 77%] Linking CXX executable ../../delete_options_test +[ 70%] Built target ibf_options_test +[ 74%] Linking CXX executable ../../delete_options_test cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/delete_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -o ../../delete_options_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a -[ 80%] Linking CXX executable ../../insert_options_test +[ 77%] Linking CXX executable ../../insert_options_test cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/insert_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -o ../../insert_options_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a -[ 83%] Linking CXX executable ../../estimate_options_test +[ 80%] Linking CXX executable ../../estimate_options_test cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/estimate_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -o ../../estimate_options_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a +[ 83%] Linking CXX executable ../../count_test +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_test.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/count_test.dir/count_test.cpp.o -o ../../count_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a [ 87%] Linking CXX executable ../../estimate_test cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/estimate_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/estimate_test.dir/estimate_test.cpp.o -o ../../estimate_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a -[ 90%] Linking CXX executable ../../ibfmin_test -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibfmin_test.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -o ../../ibfmin_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a -[ 93%] Linking CXX executable ../../insert_delete_test +[ 90%] Linking CXX executable ../../insert_delete_test cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/insert_delete_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -o ../../insert_delete_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a -[ 96%] Linking CXX executable ../../ibf_test -cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_test.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/ibf_test.dir/ibf_test.cpp.o -o ../../ibf_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a -[100%] Linking CXX executable ../../minimiser_test +[ 93%] Linking CXX executable ../../minimiser_test cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/minimiser_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -o ../../minimiser_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a +[ 96%] Linking CXX executable ../../ibfmin_test +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibfmin_test.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -o ../../ibfmin_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a +[100%] Linking CXX executable ../../ibf_test +cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_test.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.3+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -flto=auto -fno-fat-lto-objects -Wl,-z,relro -Wl,-z,now CMakeFiles/ibf_test.dir/ibf_test.cpp.o -o ../../ibf_test ../../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/14/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' [100%] Built target delete_options_test make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +[100%] Built target insert_options_test make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -[100%] Built target count_test [100%] Built target estimate_options_test make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -[100%] Built target insert_options_test +[100%] Built target count_test make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' [100%] Built target estimate_test make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -[100%] Built target ibf_test -make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' -[100%] Built target ibfmin_test -make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' [100%] Built target insert_delete_test make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' [100%] Built target minimiser_test +make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +[100%] Built target ibfmin_test +make[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' +[100%] Built target ibf_test make -f test/CMakeFiles/tests.dir/build.make test/CMakeFiles/tests.dir/depend make[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.3+ds /build/reproducible-path/seqan-needle-1.0.3+ds/test /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/test/CMakeFiles/tests.dir/DependInfo.cmake "--color=" @@ -999,10 +1035,10 @@ I: Not running tests for the docs make[1]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds' dh_auto_test -Nseqan-needle-doc - cd obj-x86_64-linux-gnu && make -j42 test ARGS\+=--verbose ARGS\+=-j42 + cd obj-x86_64-linux-gnu && make -j20 test ARGS\+=--verbose ARGS\+=-j20 make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' Running tests... -/usr/bin/ctest --force-new-ctest-process --output-on-failure --no-tests=error --verbose -j42 +/usr/bin/ctest --force-new-ctest-process --output-on-failure --no-tests=error --verbose -j20 UpdateCTestConfiguration from :/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu @@ -1095,17 +1131,17 @@ 1: [----------] Global test environment set-up. 1: [----------] 4 tests from count_test 1: [ RUN ] count_test.small_example -1: [ OK ] count_test.small_example (1 ms) +1: [ OK ] count_test.small_example (2 ms) 1: [ RUN ] count_test.small_example_paired -1: [ OK ] count_test.small_example_paired (1 ms) +1: [ OK ] count_test.small_example_paired (3 ms) 1: [ RUN ] count_test.small_example_exclude 1: [ OK ] count_test.small_example_exclude (0 ms) 1: [ RUN ] count_test.genome_small_example -1: [ OK ] count_test.genome_small_example (0 ms) -1: [----------] 4 tests from count_test (4 ms total) +1: [ OK ] count_test.genome_small_example (8 ms) +1: [----------] 4 tests from count_test (15 ms total) 1: 1: [----------] Global test environment tear-down -1: [==========] 4 tests from 1 test suite ran. (4 ms total) +1: [==========] 4 tests from 1 test suite ran. (15 ms total) 1: [ PASSED ] 4 tests. 2: Running main() from ./googletest/src/gtest_main.cc 2: [==========] Running 9 tests from 2 test suites. @@ -1117,55 +1153,55 @@ 2: 2: [----------] 8 tests from insert_test 2: [ RUN ] insert_test.ibf -2: [ OK ] insert_test.ibf (1 ms) +2: [ OK ] insert_test.ibf (7 ms) 2: [ RUN ] insert_test.ibf_no_given_thresholds -2: [ OK ] insert_test.ibf_no_given_thresholds (1 ms) +2: [ OK ] insert_test.ibf_no_given_thresholds (12 ms) 2: [ RUN ] insert_test.ibf_delete -2: [ OK ] insert_test.ibf_delete (1 ms) +2: [ OK ] insert_test.ibf_delete (22 ms) 2: [ RUN ] insert_test.ibf_delete_no_given_threshold -2: [ OK ] insert_test.ibf_delete_no_given_threshold (2 ms) +2: [ OK ] insert_test.ibf_delete_no_given_threshold (16 ms) 2: [ RUN ] insert_test.ibfmin -2: [ OK ] insert_test.ibfmin (0 ms) +2: [ OK ] insert_test.ibfmin (1 ms) 2: [ RUN ] insert_test.ibfmin_delete -2: [ OK ] insert_test.ibfmin_delete (1 ms) +2: [ OK ] insert_test.ibfmin_delete (11 ms) 2: [ RUN ] insert_test.ibfmin_no_given_thresholds -2: [ OK ] insert_test.ibfmin_no_given_thresholds (0 ms) +2: [ OK ] insert_test.ibfmin_no_given_thresholds (1 ms) 2: [ RUN ] insert_test.delete_ibfmin_no_given_thresholds -2: [ OK ] insert_test.delete_ibfmin_no_given_thresholds (1 ms) -2: [----------] 8 tests from insert_test (10 ms total) +2: [ OK ] insert_test.delete_ibfmin_no_given_thresholds (21 ms) +2: [----------] 8 tests from insert_test (93 ms total) 2: 2: [----------] Global test environment tear-down -2: [==========] 9 tests from 2 test suites ran. (12 ms total) +2: [==========] 9 tests from 2 test suites ran. (96 ms total) 2: [ PASSED ] 9 tests. 3: Running main() from ./googletest/src/gtest_main.cc 3: [==========] Running 10 tests from 1 test suite. 3: [----------] Global test environment set-up. 3: [----------] 10 tests from estimate_test 3: [ RUN ] estimate_test.small_example -3: [ OK ] estimate_test.small_example (2 ms) +3: [ OK ] estimate_test.small_example (18 ms) 3: [ RUN ] estimate_test.small_example_uncompressed -3: [ OK ] estimate_test.small_example_uncompressed (0 ms) +3: [ OK ] estimate_test.small_example_uncompressed (11 ms) 3: [ RUN ] estimate_test.small_example_gene_not_found -3: [ OK ] estimate_test.small_example_gene_not_found (0 ms) +3: [ OK ] estimate_test.small_example_gene_not_found (1 ms) 3: [ RUN ] estimate_test.small_example_different_expressions_per_level -3: [ OK ] estimate_test.small_example_different_expressions_per_level (0 ms) +3: [ OK ] estimate_test.small_example_different_expressions_per_level (1 ms) 3: [ RUN ] estimate_test.small_example_different_expressions_per_level_normalization_1 -3: [ OK ] estimate_test.small_example_different_expressions_per_level_normalization_1 (1 ms) +3: [ OK ] estimate_test.small_example_different_expressions_per_level_normalization_1 (17 ms) 3: [ RUN ] estimate_test.small_example_different_expressions_per_level_normalization_1_uncompressed -3: [ OK ] estimate_test.small_example_different_expressions_per_level_normalization_1_uncompressed (0 ms) +3: [ OK ] estimate_test.small_example_different_expressions_per_level_normalization_1_uncompressed (1 ms) 3: [ RUN ] estimate_test.example 4: Running main() from ./googletest/src/gtest_main.cc 4: [==========] Running 8 tests from 1 test suite. 4: [----------] Global test environment set-up. 4: [----------] 8 tests from ibf_test 4: [ RUN ] ibf_test.given_expression_thresholds -4: [ OK ] ibf_test.given_expression_thresholds (1 ms) +4: [ OK ] ibf_test.given_expression_thresholds (10 ms) 4: [ RUN ] ibf_test.given_expression_thresholds_include_file -4: [ OK ] ibf_test.given_expression_thresholds_include_file (1 ms) +4: [ OK ] ibf_test.given_expression_thresholds_include_file (2 ms) 4: [ RUN ] ibf_test.given_expression_thresholds_exclude_file -4: [ OK ] ibf_test.given_expression_thresholds_exclude_file (0 ms) +4: [ OK ] ibf_test.given_expression_thresholds_exclude_file (1 ms) 4: [ RUN ] ibf_test.no_given_expression_thresholds -4: [ OK ] ibf_test.no_given_expression_thresholds (0 ms) +4: [ OK ] ibf_test.no_given_expression_thresholds (1 ms) 4: [ RUN ] ibf_test.expression_thresholds_by_genome 4: [ OK ] ibf_test.expression_thresholds_by_genome (0 ms) 4: [ RUN ] ibf_test.throws @@ -1178,242 +1214,242 @@ 5: [----------] Global test environment set-up. 5: [----------] 6 tests from ibfmin_test 5: [ RUN ] ibfmin_test.given_expression_thresholds -5: [ OK ] ibfmin_test.given_expression_thresholds (0 ms) +5: [ OK ] ibfmin_test.given_expression_thresholds (1 ms) 5: [ RUN ] ibfmin_test.given_expression_thresholds_multiple_threads -5: [ OK ] ibfmin_test.given_expression_thresholds_multiple_threads (2 ms) +5: [ OK ] ibfmin_test.given_expression_thresholds_multiple_threads (26 ms) 5: [ RUN ] ibfmin_test.no_given_expression_thresholds -5: [ OK ] ibfmin_test.no_given_expression_thresholds (0 ms) +5: [ OK ] ibfmin_test.no_given_expression_thresholds (8 ms) 5: [ RUN ] ibfmin_test.expression_thresholds_by_genome -5: [ OK ] ibfmin_test.expression_thresholds_by_genome (1 ms) +5: [ OK ] ibfmin_test.expression_thresholds_by_genome (2 ms) 5: [ RUN ] ibfmin_test.no_given_expression_thresholds_multiple_threads -5: [ OK ] ibfmin_test.no_given_expression_thresholds_multiple_threads (1 ms) +5: [ OK ] ibfmin_test.no_given_expression_thresholds_multiple_threads (13 ms) 5: [ RUN ] ibfmin_test.different_shape -5: [ OK ] ibfmin_test.different_shape (0 ms) -5: [----------] 6 tests from ibfmin_test (7 ms total) +5: [ OK ] ibfmin_test.different_shape (2 ms) +5: [----------] 6 tests from ibfmin_test (54 ms total) 5: 5: [----------] Global test environment tear-down -5: [==========] 6 tests from 1 test suite ran. (7 ms total) +5: [==========] 6 tests from 1 test suite ran. (54 ms total) 5: [ PASSED ] 6 tests. 6: Running main() from ./googletest/src/gtest_main.cc 6: [==========] Running 8 tests from 1 test suite. 6: [----------] Global test environment set-up. 6: [----------] 8 tests from minimiser_test 6: [ RUN ] minimiser_test.small_example -6: [ OK ] minimiser_test.small_example (2 ms) +6: [ OK ] minimiser_test.small_example (20 ms) 6: [ RUN ] minimiser_test.small_example_different_shape -6: [ OK ] minimiser_test.small_example_different_shape (0 ms) +6: [ OK ] minimiser_test.small_example_different_shape (5 ms) 6: [ RUN ] minimiser_test.small_example_samplewise -6: [ OK ] minimiser_test.small_example_samplewise (0 ms) +6: [ OK ] minimiser_test.small_example_samplewise (1 ms) 6: [ RUN ] minimiser_test.cutoff_by_filesize 6: [ OK ] minimiser_test.cutoff_by_filesize (0 ms) 6: [ RUN ] minimiser_test.small_example_two_threads -6: [ OK ] minimiser_test.small_example_two_threads (1 ms) +6: [ OK ] minimiser_test.small_example_two_threads (13 ms) 6: [ RUN ] minimiser_test.small_example_include -6: [ OK ] minimiser_test.small_example_include (0 ms) +6: [ OK ] minimiser_test.small_example_include (1 ms) 6: [ RUN ] minimiser_test.small_example_exclude -6: [ OK ] minimiser_test.small_example_exclude (0 ms) +6: [ OK ] minimiser_test.small_example_exclude (1 ms) 6: [ RUN ] minimiser_test.small_example_shape -6: [ OK ] minimiser_test.small_example_shape (0 ms) -6: [----------] 8 tests from minimiser_test (6 ms total) +6: [ OK ] minimiser_test.small_example_shape (6 ms) +6: [----------] 8 tests from minimiser_test (50 ms total) 6: 6: [----------] Global test environment tear-down -6: [==========] 8 tests from 1 test suite ran. (6 ms total) +6: [==========] 8 tests from 1 test suite ran. (50 ms total) 6: [ PASSED ] 8 tests. 7: Running main() from ./googletest/src/gtest_main.cc 7: [==========] Running 2 tests from 1 test suite. 7: [----------] Global test environment set-up. 7: [----------] 2 tests from needle_options_test 7: [ RUN ] needle_options_test.no_options -7: [ OK ] needle_options_test.no_options (3 ms) +7: [ OK ] needle_options_test.no_options (31 ms) 7: [ RUN ] needle_options_test.fail_no_argument -7: [ OK ] needle_options_test.fail_no_argument (3 ms) -7: [----------] 2 tests from needle_options_test (7 ms total) +7: [ OK ] needle_options_test.fail_no_argument (41 ms) +7: [----------] 2 tests from needle_options_test (72 ms total) 7: 7: [----------] Global test environment tear-down -7: [==========] 2 tests from 1 test suite ran. (7 ms total) +7: [==========] 2 tests from 1 test suite ran. (73 ms total) 7: [ PASSED ] 2 tests. 8: Running main() from ./googletest/src/gtest_main.cc 8: [==========] Running 19 tests from 1 test suite. 8: [----------] Global test environment set-up. 8: [----------] 19 tests from ibf_options_test 8: [ RUN ] ibf_options_test.ibf_no_options -8: [ OK ] ibf_options_test.ibf_no_options (3 ms) +8: [ OK ] ibf_options_test.ibf_no_options (34 ms) 8: [ RUN ] ibf_options_test.ibf_fail_no_argument -8: [ OK ] ibf_options_test.ibf_fail_no_argument (3 ms) +8: [ OK ] ibf_options_test.ibf_fail_no_argument (37 ms) 8: [ RUN ] ibf_options_test.ibf_fail_contradiction +8: [ OK ] ibf_options_test.ibf_fail_contradiction (63 ms) +8: [ RUN ] ibf_options_test.ibf_fail_contradiction2 9: Running main() from ./googletest/src/gtest_main.cc 9: [==========] Running 3 tests from 1 test suite. 9: [----------] Global test environment set-up. 9: [----------] 3 tests from insert_options_test 9: [ RUN ] insert_options_test.insert_no_options -9: [ OK ] insert_options_test.insert_no_options (3 ms) +9: [ OK ] insert_options_test.insert_no_options (51 ms) 9: [ RUN ] insert_options_test.insert_fail_no_argument +9: [ OK ] insert_options_test.insert_fail_no_argument (43 ms) +9: [ RUN ] insert_options_test.with_argument 10: Running main() from ./googletest/src/gtest_main.cc 10: [==========] Running 8 tests from 1 test suite. 10: [----------] Global test environment set-up. 10: [----------] 8 tests from minimiser_options_test 10: [ RUN ] minimiser_options_test.no_options -10: [ OK ] minimiser_options_test.no_options (3 ms) +10: [ OK ] minimiser_options_test.no_options (39 ms) 10: [ RUN ] minimiser_options_test.fail_no_argument +10: [ OK ] minimiser_options_test.fail_no_argument (31 ms) +10: [ RUN ] minimiser_options_test.with_arguments 11: Running main() from ./googletest/src/gtest_main.cc 11: [==========] Running 5 tests from 1 test suite. 11: [----------] Global test environment set-up. 11: [----------] 5 tests from estimate_options_test 11: [ RUN ] estimate_options_test.no_options +11: [ OK ] estimate_options_test.no_options (53 ms) +11: [ RUN ] estimate_options_test.fail_no_argument 12: Running main() from ./googletest/src/gtest_main.cc 12: [==========] Running 8 tests from 2 test suites. 12: [----------] Global test environment set-up. 12: [----------] 5 tests from count_options_test 12: [ RUN ] count_options_test.no_options - 1/13 Test #1: count_test ....................... Passed 0.02 sec - 2/13 Test #2: insert_delete_test ............... Passed 0.02 sec - 3/13 Test #5: ibfmin_test ...................... Passed 0.02 sec - 4/13 Test #6: minimiser_test ................... Passed 0.02 sec - 5/13 Test #7: needle_options_test .............. Passed 0.01 sec -9: [ OK ] insert_options_test.insert_fail_no_argument (3 ms) -9: [ RUN ] insert_options_test.with_argument -11: [ OK ] estimate_options_test.no_options (4 ms) -11: [ RUN ] estimate_options_test.fail_no_argument +12: [ OK ] count_options_test.no_options (38 ms) +12: [ RUN ] count_options_test.fail_no_argument + 1/13 Test #1: count_test ....................... Passed 0.31 sec + 2/13 Test #2: insert_delete_test ............... Passed 0.29 sec + 3/13 Test #5: ibfmin_test ...................... Passed 0.26 sec + 4/13 Test #6: minimiser_test ................... Passed 0.23 sec + 5/13 Test #7: needle_options_test .............. Passed 0.22 sec +10: [ OK ] minimiser_options_test.with_arguments (44 ms) +10: [ RUN ] minimiser_options_test.cutoff 13: Running main() from ./googletest/src/gtest_main.cc 13: [==========] Running 2 tests from 1 test suite. 13: [----------] Global test environment set-up. 13: [----------] 2 tests from delete_options_test 13: [ RUN ] delete_options_test.delete_no_options -12: [ OK ] count_options_test.no_options (4 ms) -12: [ RUN ] count_options_test.fail_no_argument -10: [ OK ] minimiser_options_test.fail_no_argument (3 ms) -10: [ RUN ] minimiser_options_test.with_arguments -8: [ OK ] ibf_options_test.ibf_fail_contradiction (3 ms) -8: [ RUN ] ibf_options_test.ibf_fail_contradiction2 -13: [ OK ] delete_options_test.delete_no_options (3 ms) +8: [ OK ] ibf_options_test.ibf_fail_contradiction2 (48 ms) +8: [ RUN ] ibf_options_test.ibf_fail_no_fpr +13: [ OK ] delete_options_test.delete_no_options (45 ms) 13: [ RUN ] delete_options_test.with_argument -11: [ OK ] estimate_options_test.fail_no_argument (3 ms) -11: [ RUN ] estimate_options_test.with_argument -12: [ OK ] count_options_test.fail_no_argument (3 ms) +12: [ OK ] count_options_test.fail_no_argument (47 ms) 12: [ RUN ] count_options_test.with_arguments -8: [ OK ] ibf_options_test.ibf_fail_contradiction2 (3 ms) -8: [ RUN ] ibf_options_test.ibf_fail_no_fpr -10: [ OK ] minimiser_options_test.with_arguments (5 ms) -10: [ RUN ] minimiser_options_test.cutoff -8: [ OK ] ibf_options_test.ibf_fail_no_fpr (3 ms) +11: [ OK ] estimate_options_test.fail_no_argument (71 ms) +11: [ RUN ] estimate_options_test.with_argument +10: [ OK ] minimiser_options_test.cutoff (50 ms) +10: [ RUN ] minimiser_options_test.multiple_sample +8: [ OK ] ibf_options_test.ibf_fail_no_fpr (52 ms) 8: [ RUN ] ibf_options_test.ibf_fail_incorrect_number_of_fprs -12: [ OK ] count_options_test.with_arguments (5 ms) +12: [ OK ] count_options_test.with_arguments (64 ms) 12: [ RUN ] count_options_test.multithreads -10: [ OK ] minimiser_options_test.cutoff (4 ms) -10: [ RUN ] minimiser_options_test.multiple_sample -8: [ OK ] ibf_options_test.ibf_fail_incorrect_number_of_fprs (3 ms) +10: [ OK ] minimiser_options_test.multiple_sample (42 ms) +10: [ RUN ] minimiser_options_test.multithreads +8: [ OK ] ibf_options_test.ibf_fail_incorrect_number_of_fprs (40 ms) 8: [ RUN ] ibf_options_test.ibf_with_argument -12: [ OK ] count_options_test.multithreads (5 ms) +12: [ OK ] count_options_test.multithreads (39 ms) 12: [ RUN ] count_options_test.paired -10: [ OK ] minimiser_options_test.multiple_sample (5 ms) -10: [ RUN ] minimiser_options_test.multithreads -12: [ OK ] count_options_test.paired (6 ms) -12: [----------] 5 tests from count_options_test (25 ms total) +10: [ OK ] minimiser_options_test.multithreads (103 ms) +10: [ RUN ] minimiser_options_test.paired +12: [ OK ] count_options_test.paired (96 ms) +12: [----------] 5 tests from count_options_test (287 ms total) 12: 12: [----------] 3 tests from genome_options_test 12: [ RUN ] genome_options_test.no_options -10: [ OK ] minimiser_options_test.multithreads (5 ms) -10: [ RUN ] minimiser_options_test.paired -12: [ OK ] genome_options_test.no_options (3 ms) -12: [ RUN ] genome_options_test.fail_no_argument -10: [ OK ] minimiser_options_test.paired (5 ms) +10: [ OK ] minimiser_options_test.paired (49 ms) 10: [ RUN ] minimiser_options_test.invalid_argument -12: [ OK ] genome_options_test.fail_no_argument (4 ms) -12: [ RUN ] genome_options_test.with_arguments -10: [ OK ] minimiser_options_test.invalid_argument (3 ms) -10: [----------] 8 tests from minimiser_options_test (38 ms total) +10: [ OK ] minimiser_options_test.invalid_argument (46 ms) +10: [----------] 8 tests from minimiser_options_test (407 ms total) 10: 10: [----------] Global test environment tear-down -10: [==========] 8 tests from 1 test suite ran. (38 ms total) +10: [==========] 8 tests from 1 test suite ran. (407 ms total) 10: [ PASSED ] 8 tests. - 6/13 Test #10: minimiser_options_test ........... Passed 0.04 sec -12: [ OK ] genome_options_test.with_arguments (4 ms) -12: [----------] 3 tests from genome_options_test (12 ms total) +12: [ OK ] genome_options_test.no_options (67 ms) +12: [ RUN ] genome_options_test.fail_no_argument + 6/13 Test #10: minimiser_options_test ........... Passed 0.43 sec +12: [ OK ] genome_options_test.fail_no_argument (32 ms) +12: [ RUN ] genome_options_test.with_arguments +12: [ OK ] genome_options_test.with_arguments (59 ms) +12: [----------] 3 tests from genome_options_test (160 ms total) 12: 12: [----------] Global test environment tear-down -12: [==========] 8 tests from 2 test suites ran. (38 ms total) +12: [==========] 8 tests from 2 test suites ran. (447 ms total) 12: [ PASSED ] 8 tests. - 7/13 Test #12: count_options_test ............... Passed 0.04 sec -4: [ OK ] ibf_test.different_file_sizes (1588 ms) -4: [----------] 8 tests from ibf_test (1593 ms total) + 7/13 Test #12: count_options_test ............... Passed 0.49 sec +4: [ OK ] ibf_test.different_file_sizes (18828 ms) +4: [----------] 8 tests from ibf_test (18846 ms total) 4: 4: [----------] Global test environment tear-down -4: [==========] 8 tests from 1 test suite ran. (1593 ms total) +4: [==========] 8 tests from 1 test suite ran. (18846 ms total) 4: [ PASSED ] 8 tests. - 8/13 Test #4: ibf_test ......................... Passed 1.60 sec -8: [ OK ] ibf_options_test.ibf_with_argument (2285 ms) -8: [ RUN ] ibf_options_test.ibf_with_argument_with_options -3: [ OK ] estimate_test.example (2656 ms) + 8/13 Test #4: ibf_test ......................... Passed 18.87 sec +3: [ OK ] estimate_test.example (31851 ms) 3: [ RUN ] estimate_test.example_multiple_threads -11: [ OK ] estimate_options_test.with_argument (3634 ms) -11: [ RUN ] estimate_options_test.with_argument_normalization_method -9: [ OK ] insert_options_test.with_argument (3866 ms) -9: [----------] 3 tests from insert_options_test (3874 ms total) +8: [ OK ] ibf_options_test.ibf_with_argument (33931 ms) +8: [ RUN ] ibf_options_test.ibf_with_argument_with_options +9: [ OK ] insert_options_test.with_argument (43224 ms) +9: [----------] 3 tests from insert_options_test (43319 ms total) 9: 9: [----------] Global test environment tear-down -9: [==========] 3 tests from 1 test suite ran. (3874 ms total) +9: [==========] 3 tests from 1 test suite ran. (43319 ms total) 9: [ PASSED ] 3 tests. - 9/13 Test #9: insert_options_test .............. Passed 3.88 sec -8: [ OK ] ibf_options_test.ibf_with_argument_with_options (9453 ms) -8: [ RUN ] ibf_options_test.ibf_with_argument_with_userdefined_shape -3: [ OK ] estimate_test.example_multiple_threads (16380 ms) + 9/13 Test #9: insert_options_test .............. Passed 43.36 sec +11: [ OK ] estimate_options_test.with_argument (46971 ms) +11: [ RUN ] estimate_options_test.with_argument_normalization_method +3: [ OK ] estimate_test.example_multiple_threads (23055 ms) 3: [ RUN ] estimate_test.example_different_expressions_per_level -3: [ OK ] estimate_test.example_different_expressions_per_level (5618 ms) +8: [ OK ] ibf_options_test.ibf_with_argument_with_options (27616 ms) +8: [ RUN ] ibf_options_test.ibf_with_argument_with_userdefined_shape +3: [ OK ] estimate_test.example_different_expressions_per_level (7041 ms) 3: [ RUN ] estimate_test.example_different_expressions_per_level_multiple_threads -3: [ OK ] estimate_test.example_different_expressions_per_level_multiple_threads (13065 ms) -3: [----------] 10 tests from estimate_test (37727 ms total) +3: [ OK ] estimate_test.example_different_expressions_per_level_multiple_threads (7597 ms) +3: [----------] 10 tests from estimate_test (69598 ms total) 3: 3: [----------] Global test environment tear-down -3: [==========] 10 tests from 1 test suite ran. (37727 ms total) +3: [==========] 10 tests from 1 test suite ran. (69598 ms total) 3: [ PASSED ] 10 tests. -10/13 Test #3: estimate_test .................... Passed 37.74 sec -13: [ OK ] delete_options_test.with_argument (120095 ms) -13: [----------] 2 tests from delete_options_test (120098 ms total) +10/13 Test #3: estimate_test .................... Passed 69.64 sec +13: [ OK ] delete_options_test.with_argument (70831 ms) +13: [----------] 2 tests from delete_options_test (70877 ms total) 13: 13: [----------] Global test environment tear-down -13: [==========] 2 tests from 1 test suite ran. (120098 ms total) +13: [==========] 2 tests from 1 test suite ran. (70877 ms total) 13: [ PASSED ] 2 tests. -11/13 Test #13: delete_options_test .............. Passed 120.10 sec -11: [ OK ] estimate_options_test.with_argument_normalization_method (132739 ms) +11/13 Test #13: delete_options_test .............. Passed 70.92 sec +11: [ OK ] estimate_options_test.with_argument_normalization_method (46879 ms) 11: [ RUN ] estimate_options_test.with_argument_out -8: [ OK ] ibf_options_test.ibf_with_argument_with_userdefined_shape (125445 ms) +8: [ OK ] ibf_options_test.ibf_with_argument_with_userdefined_shape (34015 ms) 8: [ RUN ] ibf_options_test.ibfmin_no_options -8: [ OK ] ibf_options_test.ibfmin_no_options (4 ms) +8: [ OK ] ibf_options_test.ibfmin_no_options (28 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_no_argument -8: [ OK ] ibf_options_test.ibfmin_fail_no_argument (396 ms) +8: [ OK ] ibf_options_test.ibfmin_fail_no_argument (32 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_contradiction -8: [ OK ] ibf_options_test.ibfmin_fail_contradiction (3 ms) +8: [ OK ] ibf_options_test.ibfmin_fail_contradiction (43 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_contradiction2 -8: [ OK ] ibf_options_test.ibfmin_fail_contradiction2 (4 ms) +8: [ OK ] ibf_options_test.ibfmin_fail_contradiction2 (47 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_no_fpr -8: [ OK ] ibf_options_test.ibfmin_fail_no_fpr (3 ms) +8: [ OK ] ibf_options_test.ibfmin_fail_no_fpr (39 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_incorrect_number_of_fprs -8: [ OK ] ibf_options_test.ibfmin_fail_incorrect_number_of_fprs (3 ms) +8: [ OK ] ibf_options_test.ibfmin_fail_incorrect_number_of_fprs (35 ms) 8: [ RUN ] ibf_options_test.ibfmin_with_argument -8: [ OK ] ibf_options_test.ibfmin_with_argument (3 ms) +8: [ OK ] ibf_options_test.ibfmin_with_argument (40 ms) 8: [ RUN ] ibf_options_test.compressed -8: [ OK ] ibf_options_test.compressed (3 ms) +8: [ OK ] ibf_options_test.compressed (31 ms) 8: [ RUN ] ibf_options_test.more_hash_functions -8: [ OK ] ibf_options_test.more_hash_functions (3 ms) +8: [ OK ] ibf_options_test.more_hash_functions (48 ms) 8: [ RUN ] ibf_options_test.expression_thresholds -8: [ OK ] ibf_options_test.expression_thresholds (3 ms) -8: [----------] 19 tests from ibf_options_test (137640 ms total) +8: [ OK ] ibf_options_test.expression_thresholds (31 ms) +8: [----------] 19 tests from ibf_options_test (96219 ms total) 8: 8: [----------] Global test environment tear-down -8: [==========] 19 tests from 1 test suite ran. (137640 ms total) +8: [==========] 19 tests from 1 test suite ran. (96219 ms total) 8: [ PASSED ] 19 tests. -12/13 Test #8: ibf_options_test ................. Passed 137.64 sec -11: [ OK ] estimate_options_test.with_argument_out (15895 ms) -11: [----------] 5 tests from estimate_options_test (152277 ms total) +12/13 Test #8: ibf_options_test ................. Passed 96.25 sec +11: [ OK ] estimate_options_test.with_argument_out (39547 ms) +11: [----------] 5 tests from estimate_options_test (133524 ms total) 11: 11: [----------] Global test environment tear-down -11: [==========] 5 tests from 1 test suite ran. (152277 ms total) +11: [==========] 5 tests from 1 test suite ran. (133525 ms total) 11: [ PASSED ] 5 tests. -13/13 Test #11: estimate_options_test ............ Passed 152.28 sec +13/13 Test #11: estimate_options_test ............ Passed 133.55 sec 100% tests passed, 0 tests failed out of 13 -Total Test time (real) = 152.30 sec +Total Test time (real) = 133.78 sec make[1]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' debian/rules execute_after_dh_auto_test make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds' @@ -1422,7 +1458,7 @@ create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install - cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/seqan-needle-1.0.3\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j20 install DESTDIR=/build/reproducible-path/seqan-needle-1.0.3\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu/CMakeFiles/VerifyGlobs.cmake /usr/bin/cmake -S/build/reproducible-path/seqan-needle-1.0.3+ds -B/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 @@ -1452,8 +1488,8 @@ -- You can run `make tests` to build tests. -- You can run `make test` to run tests. -- You can run `make check` to build and run tests. --- Configuring done (3.1s) --- Generating done (0.2s) +-- Configuring done (9.9s) +-- Generating done (0.3s) -- Build files have been written to: /build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/seqan-needle-1.0.3+ds/obj-x86_64-linux-gnu' @@ -1482,9 +1518,9 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'seqan-needle' in '../seqan-needle_1.0.3+ds-1_amd64.deb'. dpkg-deb: building package 'seqan-needle-dbgsym' in '../seqan-needle-dbgsym_1.0.3+ds-1_amd64.deb'. dpkg-deb: building package 'seqan-needle-doc' in '../seqan-needle-doc_1.0.3+ds-1_all.deb'. +dpkg-deb: building package 'seqan-needle' in '../seqan-needle_1.0.3+ds-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../seqan-needle_1.0.3+ds-1_amd64.buildinfo dpkg-genchanges --build=binary -O../seqan-needle_1.0.3+ds-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1492,12 +1528,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2943108/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2943108/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3624419 and its subdirectories -I: Current time: Tue Dec 16 23:59:49 -12 2025 -I: pbuilder-time-stamp: 1765972789 +I: removing directory /srv/workspace/pbuilder/2943108 and its subdirectories +I: Current time: Thu Nov 14 19:51:34 +14 2024 +I: pbuilder-time-stamp: 1731563494