Diff of the two buildlogs: -- --- b1/build.log 2024-04-28 22:39:19.159206282 +0000 +++ b2/build.log 2024-04-28 22:40:47.379439923 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat May 31 17:00:16 -12 2025 -I: pbuilder-time-stamp: 1748754016 +I: Current time: Mon Apr 29 12:39:21 +14 2024 +I: pbuilder-time-stamp: 1714343961 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -29,52 +29,84 @@ dpkg-source: info: applying spelling.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2720514/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3875679/tmp/hooks/D01_modify_environment starting +debug: Running on ionos1-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 28 22:39 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3875679/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3875679/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='d5380f59380d493ca56306125ba4a847' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2720514' - PS1='# ' - PS2='> ' + INVOCATION_ID=0e7a63779fe94721b906df668a7be917 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3875679 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.10Ck8dmE/pbuilderrc_XKW1 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.10Ck8dmE/b1 --logfile b1/build.log libbio-mage-utils-perl_20030502.0-5.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.10Ck8dmE/pbuilderrc_hE3w --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.10Ck8dmE/b2 --logfile b2/build.log libbio-mage-utils-perl_20030502.0-5.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos15-amd64 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 27 17:46 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2720514/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Apr 22 13:10 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3875679/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -87,7 +119,7 @@ Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. -(Reading database ... 19724 files and directories currently installed.) +(Reading database ... 19900 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: @@ -140,10 +172,10 @@ Get: 28 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.15.3 [901 kB] -Fetched 19.0 MB in 11s (1785 kB/s) +Fetched 19.0 MB in 4s (4834 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. -(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19724 files and directories currently installed.) +(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19900 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. @@ -275,7 +307,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/libbio-mage-utils-perl-20030502.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbio-mage-utils-perl_20030502.0-5_source.changes +I: user script /srv/workspace/pbuilder/3875679/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/3875679/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libbio-mage-utils-perl-20030502.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libbio-mage-utils-perl_20030502.0-5_source.changes dpkg-buildpackage: info: source package libbio-mage-utils-perl dpkg-buildpackage: info: source version 20030502.0-5 dpkg-buildpackage: info: source distribution unstable @@ -298,57 +334,57 @@ Writing Makefile for Bio::MAGE Writing MYMETA.yml and MYMETA.json dh_auto_build - make -j42 + make -j20 make[1]: Entering directory '/build/reproducible-path/libbio-mage-utils-perl-20030502.0' -cp MAGE/XML/Handler/DocumentHandler.pm blib/lib/Bio/MAGE/XML/Handler/DocumentHandler.pm -cp MAGE/Tools/MGEDOntologyEntry.pm blib/lib/Bio/MAGE/Tools/MGEDOntologyEntry.pm +cp MAGE/XML/Writer.pm blib/lib/Bio/MAGE/XML/Writer.pm +cp MAGE/XML/Handler.pm blib/lib/Bio/MAGE/XML/Handler.pm cp MAGE/SQLUtils.pm blib/lib/Bio/MAGE/SQLUtils.pm +cp MAGE/Tools/MGEDOntologyClassEntry.pm blib/lib/Bio/MAGE/Tools/MGEDOntologyClassEntry.pm cp MAGE/XML/Reader.pm blib/lib/Bio/MAGE/XML/Reader.pm cp MAGE/XML/Handler/ObjectHandlerI.pm blib/lib/Bio/MAGE/XML/Handler/ObjectHandlerI.pm -cp MAGE/XMLUtils.pm blib/lib/Bio/MAGE/XMLUtils.pm -cp MAGE/XML/Handler.pm blib/lib/Bio/MAGE/XML/Handler.pm -cp MAGE/Tools/MGEDOntologyHelper.pm blib/lib/Bio/MAGE/Tools/MGEDOntologyHelper.pm -cp MAGE/Tools/MGEDOntologyClassEntry.pm blib/lib/Bio/MAGE/Tools/MGEDOntologyClassEntry.pm +cp MAGE/XML/Handler/DocumentHandler.pm blib/lib/Bio/MAGE/XML/Handler/DocumentHandler.pm cp MAGE/XML/Handler/ContentHandler.pm blib/lib/Bio/MAGE/XML/Handler/ContentHandler.pm -cp MAGE/XML/Writer.pm blib/lib/Bio/MAGE/XML/Writer.pm +cp MAGE/XMLUtils.pm blib/lib/Bio/MAGE/XMLUtils.pm +cp MAGE/Tools/MGEDOntologyEntry.pm blib/lib/Bio/MAGE/Tools/MGEDOntologyEntry.pm cp MAGE/Tools/MGEDOntologyPropertyEntry.pm blib/lib/Bio/MAGE/Tools/MGEDOntologyPropertyEntry.pm cp MAGE/XML/Handler/ObjectHandler/SQL.pm blib/lib/Bio/MAGE/XML/Handler/ObjectHandler/SQL.pm +cp MAGE/Tools/MGEDOntologyHelper.pm blib/lib/Bio/MAGE/Tools/MGEDOntologyHelper.pm Manifying 10 pod documents make[1]: Leaving directory '/build/reproducible-path/libbio-mage-utils-perl-20030502.0' dh_auto_test - make -j42 test TEST_VERBOSE=1 + make -j20 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbio-mage-utils-perl-20030502.0' No tests defined for Bio::MAGE extension. make[1]: Leaving directory '/build/reproducible-path/libbio-mage-utils-perl-20030502.0' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libbio-mage-utils-perl/ - make -j42 install DESTDIR=/build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr + make -j20 install DESTDIR=/build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libbio-mage-utils-perl-20030502.0' Manifying 10 pod documents Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/XMLUtils.pm Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/SQLUtils.pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/XML/Writer.pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/XML/Handler.pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/Tools/MGEDOntologyClassEntry.pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/Tools/MGEDOntologyHelper.pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/Tools/MGEDOntologyEntry.pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/Tools/MGEDOntologyPropertyEntry.pm Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/XML/Reader.pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/XML/Handler/DocumentHandler.pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/XML/Handler/ObjectHandlerI.pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/XML/Handler.pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/XML/Writer.pm Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/XML/Handler/ContentHandler.pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/XML/Handler/ObjectHandlerI.pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/XML/Handler/DocumentHandler.pm Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/XML/Handler/ObjectHandler/SQL.pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/Tools/MGEDOntologyEntry.pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/Tools/MGEDOntologyHelper.pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/Tools/MGEDOntologyPropertyEntry.pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/perl5/Bio/MAGE/Tools/MGEDOntologyClassEntry.pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::XML::Handler::ObjectHandler::SQL.3pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::Tools::MGEDOntologyHelper.3pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::XML::Writer.3pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::Tools::MGEDOntologyClassEntry.3pm Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::Tools::MGEDOntologyEntry.3pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::XML::Handler::ObjectHandlerI.3pm Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::SQLUtils.3pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::XML::Reader.3pm Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::Tools::MGEDOntologyPropertyEntry.3pm Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::XML::Handler.3pm -Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::Tools::MGEDOntologyClassEntry.3pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::Tools::MGEDOntologyHelper.3pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::XML::Reader.3pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::XML::Writer.3pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::XML::Handler::ObjectHandler::SQL.3pm +Installing /build/reproducible-path/libbio-mage-utils-perl-20030502.0/debian/libbio-mage-utils-perl/usr/share/man/man3/Bio::MAGE::XML::Handler::ObjectHandlerI.3pm make[1]: Leaving directory '/build/reproducible-path/libbio-mage-utils-perl-20030502.0' dh_installdocs dh_installchangelogs @@ -372,12 +408,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3875679/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3875679/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2720514 and its subdirectories -I: Current time: Sat May 31 17:02:18 -12 2025 -I: pbuilder-time-stamp: 1748754138 +I: removing directory /srv/workspace/pbuilder/3875679 and its subdirectories +I: Current time: Mon Apr 29 12:40:46 +14 2024 +I: pbuilder-time-stamp: 1714344046