Diff of the two buildlogs: -- --- b1/build.log 2024-05-03 00:50:22.042812483 +0000 +++ b2/build.log 2024-05-03 00:51:40.003489003 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu May 2 12:48:05 -12 2024 -I: pbuilder-time-stamp: 1714697285 +I: Current time: Thu Jun 5 21:13:27 +14 2025 +I: pbuilder-time-stamp: 1749107607 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -28,52 +28,84 @@ dpkg-source: info: applying adjust-shenwei356-kmers.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3283742/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3242171/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jun 5 07:13 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3242171/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3242171/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='96b2b4f06be249939eccfcbb278016f7' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3283742' - PS1='# ' - PS2='> ' + INVOCATION_ID=e964b58d1fa044b0a9cc75d1aad91ccb + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3242171 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Ddq4x4jF/pbuilderrc_BU33 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Ddq4x4jF/b1 --logfile b1/build.log golang-github-shenwei356-bio_0.6.2-1.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Ddq4x4jF/pbuilderrc_gK6Y --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Ddq4x4jF/b2 --logfile b2/build.log golang-github-shenwei356-bio_0.6.2-1.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Apr 22 13:10 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3283742/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 27 17:46 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3242171/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -86,7 +118,7 @@ Depends: debhelper-compat (= 13), dh-golang, golang-any, golang-github-cznic-sortutil-dev, golang-github-edsrzf-mmap-go-dev, golang-github-will-rowe-nthash-dev, golang-github-zeebo-wyhash-dev, golang-github-shenwei356-breader-dev (>= 0.1.0~), golang-github-shenwei356-util-dev (>= 0.3.0~) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. -(Reading database ... 19875 files and directories currently installed.) +(Reading database ... 19699 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: @@ -216,10 +248,10 @@ Get: 89 http://deb.debian.org/debian trixie/main amd64 golang-github-shenwei356-util-dev all 0.5.0-2 [35.2 kB] Get: 90 http://deb.debian.org/debian trixie/main amd64 golang-github-will-rowe-nthash-dev all 0.4.0-1 [5644 B] Get: 91 http://deb.debian.org/debian trixie/main amd64 golang-github-zeebo-wyhash-dev all 0.0.1-3 [23.5 kB] -Fetched 107 MB in 4s (27.8 MB/s) +Fetched 107 MB in 1s (79.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. -(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19875 files and directories currently installed.) +(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19699 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. @@ -595,7 +627,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/golang-github-shenwei356-bio-0.6.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../golang-github-shenwei356-bio_0.6.2-1_source.changes +I: user script /srv/workspace/pbuilder/3242171/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/3242171/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/golang-github-shenwei356-bio-0.6.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../golang-github-shenwei356-bio_0.6.2-1_source.changes dpkg-buildpackage: info: source package golang-github-shenwei356-bio dpkg-buildpackage: info: source version 0.6.2-1 dpkg-buildpackage: info: source distribution unstable @@ -613,36 +649,36 @@ dh_autoreconf -O--builddirectory=_build -O--buildsystem=golang dh_auto_configure -O--builddirectory=_build -O--buildsystem=golang dh_auto_build -O--builddirectory=_build -O--buildsystem=golang - cd _build && go install -trimpath -v -p 20 github.com/shenwei356/bio/featio/gtf github.com/shenwei356/bio/seq github.com/shenwei356/bio/seqio/fai github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/bio/sketches github.com/shenwei356/bio/taxdump github.com/shenwei356/bio/util -internal/itoa -unicode/utf8 + cd _build && go install -trimpath -v -p 42 github.com/shenwei356/bio/featio/gtf github.com/shenwei356/bio/seq github.com/shenwei356/bio/seqio/fai github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/bio/sketches github.com/shenwei356/bio/taxdump github.com/shenwei356/bio/util +log/internal +vendor/golang.org/x/crypto/internal/alias +cmp +internal/unsafeheader +unicode/utf16 +internal/nettrace +internal/goos +vendor/golang.org/x/crypto/cryptobyte/asn1 +container/list +internal/race crypto/internal/alias -internal/goarch +internal/itoa +crypto/internal/boring/sig internal/coverage/rtcov -internal/godebugs -internal/race -internal/unsafeheader math/bits -internal/goexperiment -internal/goos +internal/cpu crypto/subtle -crypto/internal/boring/sig -cmp runtime/internal/syscall -internal/cpu -container/list -runtime/internal/atomic -sync/atomic +unicode/utf8 unicode -vendor/golang.org/x/crypto/cryptobyte/asn1 -unicode/utf16 -internal/abi -internal/chacha8rand -internal/nettrace -vendor/golang.org/x/crypto/internal/alias +internal/godebugs +sync/atomic +internal/goarch +runtime/internal/atomic +internal/goexperiment runtime/internal/math +internal/chacha8rand runtime/internal/sys -log/internal +internal/abi slices internal/bytealg math @@ -653,100 +689,100 @@ internal/singleflight internal/bisect runtime/cgo +internal/godebug errors sort -strconv -io internal/oserror internal/safefilepath +io path -internal/godebug -github.com/shenwei356/bio/util +internal/intern vendor/golang.org/x/net/dns/dnsmessage +math/rand +strconv crypto/internal/nistec/fiat syscall -bytes -strings +github.com/shenwei356/bio/util hash crypto/internal/randutil -math/rand -internal/intern +bytes +strings hash/crc32 +vendor/golang.org/x/text/transform +github.com/twotwotwo/sorts crypto -reflect crypto/rc4 net/netip -vendor/golang.org/x/text/transform -github.com/twotwotwo/sorts -bufio net/http/internal/ascii +bufio regexp/syntax +reflect github.com/twotwotwo/sorts/sortutil internal/syscall/unix -time internal/syscall/execenv +time regexp -internal/fmtsort -encoding/binary -io/fs context +io/fs internal/poll embed +os +internal/fmtsort +encoding/binary crypto/internal/edwards25519/field -crypto/md5 +github.com/zeebo/wyhash encoding/base64 -crypto/cipher vendor/golang.org/x/crypto/internal/poly1305 -github.com/zeebo/wyhash -golang.org/x/sys/unix -os +crypto/md5 +crypto/cipher crypto/internal/nistec +golang.org/x/sys/unix encoding/pem -vendor/golang.org/x/crypto/chacha20 -crypto/des crypto/internal/boring +crypto/des +vendor/golang.org/x/crypto/chacha20 crypto/internal/edwards25519 +crypto/sha512 crypto/hmac +crypto/aes crypto/sha256 crypto/sha1 -crypto/aes -crypto/sha512 vendor/golang.org/x/crypto/hkdf -crypto/ecdh path/filepath -fmt vendor/golang.org/x/sys/cpu -os/exec +fmt +net vendor/golang.org/x/crypto/chacha20poly1305 -log -vendor/golang.org/x/net/http2/hpack -mime/quotedprintable -net/http/internal +crypto/ecdh +os/exec encoding/hex -github.com/will-rowe/nthash +net/http/internal +mime/quotedprintable net/url -github.com/shenwei356/util/byteutil -compress/flate mime -vendor/golang.org/x/text/unicode/norm +compress/flate +vendor/golang.org/x/net/http2/hpack +os/user +github.com/will-rowe/nthash +log +github.com/shenwei356/util/byteutil math/big +vendor/golang.org/x/text/unicode/norm github.com/shenwei356/bio/seq vendor/golang.org/x/text/unicode/bidi +github.com/shenwei356/bio/sketches compress/gzip github.com/klauspost/compress/flate vendor/golang.org/x/text/secure/bidirule -github.com/shenwei356/bio/sketches vendor/golang.org/x/net/idna github.com/edsrzf/mmap-go -os/user -net -github.com/shenwei356/bio/seqio/fai -crypto/rand crypto/internal/boring/bbig -crypto/internal/bigmod +crypto/rand crypto/dsa -encoding/asn1 +crypto/internal/bigmod crypto/elliptic +encoding/asn1 +github.com/shenwei356/bio/seqio/fai crypto/ed25519 crypto/rsa github.com/klauspost/pgzip @@ -756,15 +792,15 @@ vendor/golang.org/x/net/http/httpproxy net/textproto crypto/x509 -mime/multipart vendor/golang.org/x/net/http/httpguts +mime/multipart crypto/tls net/http/httptrace net/http github.com/shenwei356/xopen github.com/shenwei356/breader -github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/bio/taxdump +github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/bio/featio/gtf debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/golang-github-shenwei356-bio-0.6.2' @@ -772,45 +808,45 @@ cp seqio/fai/seq.fa* _build/src/github.com/shenwei356/bio/seqio/fai cp featio/gtf/test*.gtf _build/src/github.com/shenwei356/bio/featio/gtf dh_auto_test - cd _build && go test -vet=off -v -p 20 github.com/shenwei356/bio/featio/gtf github.com/shenwei356/bio/seq github.com/shenwei356/bio/seqio/fai github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/bio/sketches github.com/shenwei356/bio/taxdump github.com/shenwei356/bio/util + cd _build && go test -vet=off -v -p 42 github.com/shenwei356/bio/featio/gtf github.com/shenwei356/bio/seq github.com/shenwei356/bio/seqio/fai github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/bio/sketches github.com/shenwei356/bio/taxdump github.com/shenwei356/bio/util === RUN TestGTF {140 Twinscan inter 5141 8522 0xc0000383f0 []} {140 Twinscan inter_CNS 8523 9711 0xc000038410 []} {140 Twinscan inter 9712 13182 0xc000038420 []} {140 Twinscan 3UTR 65149 65487 0xc000038430 []} {140 Twinscan 3UTR 66823 66992 0xc000038440 []} -{140 Twinscan stop_codon 66993 66995 0xc000038450 0xc0000143a8 []} -{140 Twinscan CDS 66996 66999 0xc000038460 0xc000014400 []} +{140 Twinscan stop_codon 66993 66995 0xc000038450 0xc0000143c8 []} +{140 Twinscan CDS 66996 66999 0xc000038460 0xc000014420 []} {140 Twinscan intron_CNS 70103 70151 0xc000038470 []} -{140 Twinscan CDS 70207 70294 0xc000038480 0xc000014408 []} -{140 Twinscan CDS 71696 71807 0xc000038490 0xc000014410 []} -{140 Twinscan start_codon 71805 71806 0xc0000384a0 0xc000014418 []} -{140 Twinscan start_codon 73222 73222 0xc0000384b0 0xc000014420 []} -{140 Twinscan CDS 73222 73222 0xc0000384c0 0xc000014428 []} +{140 Twinscan CDS 70207 70294 0xc000038480 0xc000014428 []} +{140 Twinscan CDS 71696 71807 0xc000038490 0xc000014430 []} +{140 Twinscan start_codon 71805 71806 0xc0000384a0 0xc000014438 []} +{140 Twinscan start_codon 73222 73222 0xc0000384b0 0xc000014440 []} +{140 Twinscan CDS 73222 73222 0xc0000384c0 0xc000014448 []} {140 Twinscan 5UTR 73223 73504 0xc0000384d0 []} --- PASS: TestGTF (0.00s) === RUN TestGTF2 {381 Twinscan exon 150 200 0xc000038570 []} {381 Twinscan exon 300 401 0xc000038590 []} -{381 Twinscan CDS 380 401 0xc0000385a0 0xc000014448 []} +{381 Twinscan CDS 380 401 0xc0000385a0 0xc000014468 []} {381 Twinscan exon 501 650 0xc0000385b0 []} -{381 Twinscan CDS 501 650 0xc0000385c0 0xc0000144a0 []} +{381 Twinscan CDS 501 650 0xc0000385c0 0xc0000144c0 []} {381 Twinscan exon 700 800 0xc0000385d0 []} -{381 Twinscan CDS 700 707 0xc0000385e0 0xc0000144a8 []} +{381 Twinscan CDS 700 707 0xc0000385e0 0xc0000144c8 []} {381 Twinscan exon 900 1000 0xc0000385f0 []} -{381 Twinscan start_codon 380 382 0xc000038600 0xc0000144b0 []} -{381 Twinscan stop_codon 708 710 0xc000038610 0xc0000144b8 []} +{381 Twinscan start_codon 380 382 0xc000038600 0xc0000144d0 []} +{381 Twinscan stop_codon 708 710 0xc000038610 0xc0000144d8 []} --- PASS: TestGTF2 (0.00s) === RUN TestGTF3 -{NC_002516.2 genbank gene 6261828 6263564 0xc0000386b0 0xc0000144d8 []} -{NC_002516.2 genbank CDS 6261828 6263564 0xc0000386d0 0xc000014530 []} -{NC_002516.2 genbank gene 6263805 6264212 0xc0000386e0 0xc000014538 []} -{NC_002516.2 genbank CDS 6263805 6264212 0xc0000386f0 0xc000014540 []} -{NC_002516.2 genbank gene 6264227 6264361 0xc000038700 0xc000014548 []} -{NC_002516.2 genbank CDS 6264227 6264361 0xc000038710 0xc000014550 []} +{NC_002516.2 genbank gene 6261828 6263564 0xc00021c090 0xc000214080 []} +{NC_002516.2 genbank CDS 6261828 6263564 0xc00021c0b0 0xc000214088 []} +{NC_002516.2 genbank gene 6263805 6264212 0xc00021c0c0 0xc000214090 []} +{NC_002516.2 genbank CDS 6263805 6264212 0xc00021c0d0 0xc000214098 []} +{NC_002516.2 genbank gene 6264227 6264361 0xc00021c0e0 0xc0002140a0 []} +{NC_002516.2 genbank CDS 6264227 6264361 0xc00021c0f0 0xc0002140a8 []} --- PASS: TestGTF3 (0.00s) PASS -ok github.com/shenwei356/bio/featio/gtf 0.014s +ok github.com/shenwei356/bio/featio/gtf 0.006s === RUN Test --- PASS: Test (0.00s) === RUN TestBases2AmbBase @@ -832,23 +868,23 @@ === RUN TestSubSeqInplace --- PASS: TestSubSeqInplace (0.00s) PASS -ok github.com/shenwei356/bio/seq 0.035s +ok github.com/shenwei356/bio/seq 0.018s === RUN TestFastaReader --- PASS: TestFastaReader (0.00s) === RUN TestFastaReaderNotMapWholeFile --- PASS: TestFastaReaderNotMapWholeFile (0.00s) PASS -ok github.com/shenwei356/bio/seqio/fai 0.010s +ok github.com/shenwei356/bio/seqio/fai 0.003s === RUN TestFastaReader2 ---- PASS: TestFastaReader2 (0.01s) +--- PASS: TestFastaReader2 (0.00s) === RUN TestFastaReader3 --- PASS: TestFastaReader3 (0.00s) === RUN TestFastqReadern --- PASS: TestFastqReadern (0.01s) === RUN TestFastaReader ---- PASS: TestFastaReader (0.02s) +--- PASS: TestFastaReader (0.01s) === RUN TestFastqReader ---- PASS: TestFastqReader (0.03s) +--- PASS: TestFastqReader (0.01s) === RUN TestFastqReader2 --- PASS: TestFastqReader2 (0.01s) === RUN TestFastqReader3 @@ -856,11 +892,11 @@ === RUN TestBlankFile --- PASS: TestBlankFile (0.01s) === RUN TestBlankFile2 ---- PASS: TestBlankFile2 (0.00s) +--- PASS: TestBlankFile2 (0.14s) === RUN TestEmptyFile --- PASS: TestEmptyFile (0.00s) PASS -ok github.com/shenwei356/bio/seqio/fastx 0.146s +ok github.com/shenwei356/bio/seqio/fastx 0.202s === RUN TestProteinIterator --- PASS: TestProteinIterator (0.00s) === RUN TestKmerIterator @@ -874,15 +910,15 @@ === RUN TestSyncmer --- PASS: TestSyncmer (0.00s) PASS -ok github.com/shenwei356/bio/sketches 0.038s +ok github.com/shenwei356/bio/sketches 0.014s === RUN TestPackTwoTaxids --- PASS: TestPackTwoTaxids (0.00s) PASS -ok github.com/shenwei356/bio/taxdump 0.014s +ok github.com/shenwei356/bio/taxdump 0.005s === RUN Test --- PASS: Test (0.00s) PASS -ok github.com/shenwei356/bio/util 0.007s +ok github.com/shenwei356/bio/util 0.003s make[1]: Leaving directory '/build/reproducible-path/golang-github-shenwei356-bio-0.6.2' create-stamp debian/debhelper-build-stamp dh_testroot -O--builddirectory=_build -O--buildsystem=golang @@ -915,12 +951,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3242171/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3242171/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3283742 and its subdirectories -I: Current time: Thu May 2 12:50:21 -12 2024 -I: pbuilder-time-stamp: 1714697421 +I: removing directory /srv/workspace/pbuilder/3242171 and its subdirectories +I: Current time: Thu Jun 5 21:14:39 +14 2025 +I: pbuilder-time-stamp: 1749107679