Diff of the two buildlogs: -- --- b1/build.log 2024-12-29 02:56:41.125080802 +0000 +++ b2/build.log 2024-12-29 03:09:44.473299919 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri Jan 30 21:16:14 -12 2026 -I: pbuilder-time-stamp: 1769850974 +I: Current time: Sun Dec 29 16:56:44 +14 2024 +I: pbuilder-time-stamp: 1735441004 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -27,52 +27,84 @@ dpkg-source: info: applying enable_complex_build.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/4192104/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/102524/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 29 02:57 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/102524/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/102524/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='0c5e0b9d75ae4e8f8d0481826175328e' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='4192104' - PS1='# ' - PS2='> ' + INVOCATION_ID=0ad707ba3afb4b518520a0ab7345e702 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=102524 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XKihvrhS/pbuilderrc_6OZX --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XKihvrhS/b1 --logfile b1/build.log fenicsx-performance-tests_0.9.0-2.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XKihvrhS/pbuilderrc_ZvcA --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XKihvrhS/b2 --logfile b2/build.log fenicsx-performance-tests_0.9.0-2.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos5-amd64 6.11.10+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.10-1~bpo12+1 (2024-12-19) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/4192104/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/102524/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -493,7 +525,7 @@ Get: 371 http://deb.debian.org/debian trixie/main amd64 python3-setuptools all 75.6.0-1 [720 kB] Get: 372 http://deb.debian.org/debian trixie/main amd64 python3-ffcx all 1:0.9.0-2 [94.9 kB] Get: 373 http://deb.debian.org/debian trixie/main amd64 libdolfinx-dev amd64 1:0.9.0-5+b1 [202 kB] -Fetched 296 MB in 19s (15.5 MB/s) +Fetched 296 MB in 13s (22.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19965 files and directories currently installed.) @@ -1689,8 +1721,8 @@ Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Sat Jan 31 09:17:49 UTC 2026. -Universal Time is now: Sat Jan 31 09:17:49 UTC 2026. +Local time is now: Sun Dec 29 03:01:58 UTC 2024. +Universal Time is now: Sun Dec 29 03:01:58 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:amd64 (1.83.0-4) ... @@ -2067,7 +2099,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/fenicsx-performance-tests-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fenicsx-performance-tests_0.9.0-2_source.changes +I: user script /srv/workspace/pbuilder/102524/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/102524/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/fenicsx-performance-tests-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fenicsx-performance-tests_0.9.0-2_source.changes dpkg-buildpackage: info: source package fenicsx-performance-tests dpkg-buildpackage: info: source version 0.9.0-2 dpkg-buildpackage: info: source distribution unstable @@ -2151,8 +2187,8 @@ -- Adding boost_program_options dependencies: headers -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70") found components: program_options -- -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall --- Configuring done (2.1s) --- Generating done (0.0s) +-- Configuring done (20.6s) +-- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: @@ -2164,7 +2200,7 @@ -- Build files have been written to: /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0' dh_auto_build -O--buildsystem=cmake -O--sourcedirectory=src - cd obj-x86_64-linux-gnu && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -2172,25 +2208,25 @@ make[2]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/depend make[3]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu' -[ 9%] Generating Poisson.c -[ 18%] Generating Elasticity.c -ffcx /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/Poisson.py +[ 9%] Generating Elasticity.c ffcx /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/Elasticity.py +[ 18%] Generating Poisson.c +ffcx /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/Poisson.py cd /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenicsx-performance-tests-0.9.0/src /build/reproducible-path/fenicsx-performance-tests-0.9.0/src /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu/CMakeFiles/dolfinx-scaling-test.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/build make[3]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu' +[ 27%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o +/usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/main.cpp [ 36%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -[ 36%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -[ 45%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -[ 54%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -[ 63%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -[ 72%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o +[ 45%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/mesh.cpp -[ 90%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -[ 90%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o +[ 54%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/elasticity_problem.cpp -/usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/main.cpp +[ 63%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o +[ 72%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o +[ 81%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o +[ 90%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/poisson_problem.cpp /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/mem.cpp @@ -2208,67 +2244,67 @@ make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0' debian/tests/run-dolfinx-scaling-test -p /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu ==== elasticity weak scaling (3 processes with ndofs=10000) ==== -[2026-01-30 21:18:44.297] [RANK: 0] [info] Using partitioner with 69312 cell data -[2026-01-30 21:18:44.298] [RANK: 0] [info] Compute partition of cells across ranks -[2026-01-30 21:18:44.298] [RANK: 0] [info] Building mesh dual graph -[2026-01-30 21:18:44.298] [RANK: 0] [info] Build local part of mesh dual graph (mixed) -[2026-01-30 21:18:44.312] [RANK: 0] [info] Build nonlocal part of mesh dual graph -[2026-01-30 21:18:44.312] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:18:44.312] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:18:44.312] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 -[2026-01-30 21:18:44.313] [RANK: 0] [info] Graph edges (local: 66332, non-local: 962) -[2026-01-30 21:18:44.313] [RANK: 0] [info] Compute graph partition using PT-SCOTCH -[2026-01-30 21:18:52.033] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -[2026-01-30 21:18:52.034] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -[2026-01-30 21:18:52.036] [RANK: 0] [info] Extract basic topology: 68316->68316 -[2026-01-30 21:18:52.036] [RANK: 0] [info] Build local dual graph -[2026-01-30 21:18:52.036] [RANK: 0] [info] Build local part of mesh dual graph (mixed) -[2026-01-30 21:18:52.053] [RANK: 0] [info] GPS pseudo-diameter:(119) 16558-1134 -[2026-01-30 21:18:52.056] [RANK: 0] [info] Create topology (single cell type) -[2026-01-30 21:18:52.056] [RANK: 0] [info] Create topology (generalised) -[2026-01-30 21:18:52.060] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -[2026-01-30 21:18:52.060] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -[2026-01-30 21:18:52.065] [RANK: 0] [info] Compute ghost indices -[2026-01-30 21:18:52.065] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 -[2026-01-30 21:18:52.065] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 -[2026-01-30 21:18:52.067] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -[2026-01-30 21:18:52.067] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -[2026-01-30 21:18:52.073] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:18:52.073] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:18:52.073] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:18:52.074] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:18:52.075] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -[2026-01-30 21:18:52.075] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -[2026-01-30 21:18:52.075] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 -[2026-01-30 21:18:52.076] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:18:52.076] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:18:52.076] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 -[2026-01-30 21:18:52.076] [RANK: 0] [info] Checking required entities per dimension -[2026-01-30 21:18:52.076] [RANK: 0] [info] Cell type: 0 dofmap: 17079x4 -[2026-01-30 21:18:52.079] [RANK: 0] [info] Global index computation -[2026-01-30 21:18:52.079] [RANK: 0] [info] Got 1 index_maps -[2026-01-30 21:18:52.079] [RANK: 0] [info] Get global indices -[2026-01-30 21:18:52.080] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:18:52.080] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:07:44.677] [RANK: 0] [info] Using partitioner with 69312 cell data +[2024-12-29 17:07:44.679] [RANK: 0] [info] Compute partition of cells across ranks +[2024-12-29 17:07:44.679] [RANK: 0] [info] Building mesh dual graph +[2024-12-29 17:07:44.679] [RANK: 0] [info] Build local part of mesh dual graph (mixed) +[2024-12-29 17:07:44.716] [RANK: 0] [info] Build nonlocal part of mesh dual graph +[2024-12-29 17:07:44.780] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:07:44.792] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:07:44.792] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 +[2024-12-29 17:07:44.794] [RANK: 0] [info] Graph edges (local: 66332, non-local: 962) +[2024-12-29 17:07:44.794] [RANK: 0] [info] Compute graph partition using PT-SCOTCH +[2024-12-29 17:07:54.598] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +[2024-12-29 17:07:54.610] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +[2024-12-29 17:07:54.615] [RANK: 0] [info] Extract basic topology: 68388->68388 +[2024-12-29 17:07:54.615] [RANK: 0] [info] Build local dual graph +[2024-12-29 17:07:54.615] [RANK: 0] [info] Build local part of mesh dual graph (mixed) +[2024-12-29 17:07:54.643] [RANK: 0] [info] GPS pseudo-diameter:(117) 16672-1129 +[2024-12-29 17:07:54.647] [RANK: 0] [info] Create topology (single cell type) +[2024-12-29 17:07:54.647] [RANK: 0] [info] Create topology (generalised) +[2024-12-29 17:07:54.655] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +[2024-12-29 17:07:54.655] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +[2024-12-29 17:07:54.661] [RANK: 0] [info] Compute ghost indices +[2024-12-29 17:07:54.661] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 +[2024-12-29 17:07:54.661] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 +[2024-12-29 17:07:54.664] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +[2024-12-29 17:07:54.664] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +[2024-12-29 17:07:54.670] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:07:54.670] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:07:54.671] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:07:54.671] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:07:54.673] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +[2024-12-29 17:07:54.673] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +[2024-12-29 17:07:54.673] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 +[2024-12-29 17:07:54.673] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:07:54.674] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:07:54.674] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 +[2024-12-29 17:07:54.675] [RANK: 0] [info] Checking required entities per dimension +[2024-12-29 17:07:54.675] [RANK: 0] [info] Cell type: 0 dofmap: 17097x4 +[2024-12-29 17:07:54.678] [RANK: 0] [info] Global index computation +[2024-12-29 17:07:54.678] [RANK: 0] [info] Got 1 index_maps +[2024-12-29 17:07:54.678] [RANK: 0] [info] Get global indices +[2024-12-29 17:07:54.679] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:07:54.679] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (24x19x19) to be refined 0 times -[2026-01-30 21:18:52.081] [RANK: 0] [info] Computing mesh entities of dimension 2 -[2026-01-30 21:18:52.103] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:18:52.104] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:18:52.165] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:18:52.165] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:18:52.167] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) -[2026-01-30 21:18:52.167] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. -[2026-01-30 21:18:52.167] [RANK: 0] [info] Checking required entities per dimension -[2026-01-30 21:18:52.168] [RANK: 0] [info] Cell type: 0 dofmap: 17079x4 -[2026-01-30 21:18:52.170] [RANK: 0] [info] Global index computation -[2026-01-30 21:18:52.170] [RANK: 0] [info] Got 1 index_maps -[2026-01-30 21:18:52.171] [RANK: 0] [info] Get global indices -[2026-01-30 21:18:52.171] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:18:52.171] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:18:52.172] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) -[2026-01-30 21:18:52.172] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) -[2026-01-30 21:18:52.172] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) -[2026-01-30 21:18:52.192] [RANK: 0] [info] Column ghost size increased from 205 to 539 +[2024-12-29 17:07:54.681] [RANK: 0] [info] Computing mesh entities of dimension 2 +[2024-12-29 17:07:54.706] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:07:54.707] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:07:54.756] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:07:54.757] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:07:54.758] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) +[2024-12-29 17:07:54.758] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. +[2024-12-29 17:07:54.760] [RANK: 0] [info] Checking required entities per dimension +[2024-12-29 17:07:54.760] [RANK: 0] [info] Cell type: 0 dofmap: 17097x4 +[2024-12-29 17:07:54.763] [RANK: 0] [info] Global index computation +[2024-12-29 17:07:54.763] [RANK: 0] [info] Got 1 index_maps +[2024-12-29 17:07:54.764] [RANK: 0] [info] Get global indices +[2024-12-29 17:07:54.764] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:07:54.764] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:07:54.765] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) +[2024-12-29 17:07:54.766] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) +[2024-12-29 17:07:54.766] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) +[2024-12-29 17:07:54.801] [RANK: 0] [info] Column ghost size increased from 212 to 549 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.9.0 @@ -2282,7 +2318,7 @@ Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- -[2026-01-30 21:18:52.308] [RANK: 0] [info] PETSc Krylov solver starting to solve system. +[2024-12-29 17:07:55.038] [RANK: 0] [info] PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero @@ -2303,11 +2339,11 @@ MatCoarsen Object: 3 MPI processes type: misk Number smoothing steps to construct prolongation 1 - Complexity: grid = 1.095 operator = 1.39664 + Complexity: grid = 1.0956 operator = 1.38982 Per-level complexity: op = operator, int = interpolation #equations | #active PEs | avg nnz/row op | avg nnz/row int - 252 1 202 0 - 2598 3 172 39 + 240 1 187 0 + 2628 3 169 38 30000 3 42 22 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes @@ -2333,35 +2369,35 @@ tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd - factor fill ratio given 5., needed 1.12216 + factor fill ratio given 5., needed 1.11396 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij - rows=252, cols=252, bs=6 + rows=240, cols=240, bs=6 package used to perform factorization: petsc - total: nonzeros=56880, allocated nonzeros=56880 - using I-node routines: found 70 nodes, limit used is 5 + total: nonzeros=49968, allocated nonzeros=49968 + using I-node routines: found 68 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij - rows=252, cols=252, bs=6 - total: nonzeros=50688, allocated nonzeros=50688 + rows=240, cols=240, bs=6 + total: nonzeros=44856, allocated nonzeros=44856 total number of mallocs used during MatSetValues calls=0 - using I-node routines: found 84 nodes, limit used is 5 + using I-node routines: found 78 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij - rows=252, cols=252, bs=6 - total: nonzeros=50688, allocated nonzeros=50688 + rows=240, cols=240, bs=6 + total: nonzeros=44856, allocated nonzeros=44856 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation - using I-node (on process 0) routines: found 84 nodes, limit used is 5 + using I-node (on process 0) routines: found 78 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind - eigenvalue targets used: min 0.266611, max 2.93272 - eigenvalues provided (min 0.0325975, max 2.66611) with transform: [0. 0.1; 0. 1.1] + eigenvalue targets used: min 0.262938, max 2.89231 + eigenvalues provided (min 0.0473925, max 2.62938) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning @@ -2372,18 +2408,18 @@ linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij - rows=2598, cols=2598, bs=6 - total: nonzeros=445716, allocated nonzeros=445716 + rows=2628, cols=2628, bs=6 + total: nonzeros=443016, allocated nonzeros=443016 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation - using I-node (on process 0) routines: found 272 nodes, limit used is 5 + using I-node (on process 0) routines: found 270 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind - eigenvalue targets used: min 0.25751, max 2.83261 - eigenvalues provided (min 0.0690552, max 2.5751) with transform: [0. 0.1; 0. 1.1] + eigenvalue targets used: min 0.258245, max 2.84069 + eigenvalues provided (min 0.0727393, max 2.58245) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning @@ -2398,7 +2434,7 @@ total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space - using I-node (on process 0) routines: found 3357 nodes, limit used is 5 + using I-node (on process 0) routines: found 3324 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes @@ -2407,46 +2443,46 @@ total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space - using I-node (on process 0) routines: found 3357 nodes, limit used is 5 + using I-node (on process 0) routines: found 3324 nodes, limit used is 5 -[MPI_MAX] Summary of timings | reps wall avg wall tot -------------------------------------------------------------------------------------------------------- -Build BoxMesh (tetrahedra) | 1 7.790000 7.790000 -Build dofmap data | 2 0.010000 0.020000 -Build sparsity | 1 0.010000 0.010000 -Compute connectivity 2-0 | 1 0.000000 0.000000 -Compute dof reordering map | 2 0.000000 0.000000 -Compute entities of dim = 2 | 1 0.080000 0.080000 -Compute graph partition (SCOTCH) | 1 7.720000 7.720000 -Compute local part of mesh dual graph (mixed) | 2 0.020000 0.040000 -Compute local-to-local map | 1 0.000000 0.000000 -Compute non-local part of mesh dual graph | 1 0.000000 0.000000 -Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 -Distribute fixed-degree adjacency list to destination ranks | 1 0.010000 0.010000 -Distribute row-wise data (scalable) | 1 0.000000 0.000000 -GPS: create_level_structure | 2 0.000000 0.000000 -Gibbs-Poole-Stockmeyer ordering | 1 0.000000 0.000000 -Init MPI | 1 0.030000 0.030000 -Init PETSc | 1 0.000000 0.000000 -Init dofmap from element dofmap | 2 0.005000 0.010000 -Init logging | 1 0.000000 0.000000 -PETSc Krylov solver | 1 0.450000 0.450000 -SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 -SCOTCH: call SCOTCH_dgraphPart | 1 7.720000 7.720000 -SparsityPattern::finalize | 1 0.010000 0.010000 -Topology: create | 1 0.020000 0.020000 -Topology: determine shared index ownership | 1 0.010000 0.010000 -Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 -ZZZ Assemble matrix | 1 0.100000 0.100000 -ZZZ Assemble vector | 1 0.010000 0.010000 -ZZZ Create Mesh | 1 7.790000 7.790000 -ZZZ Create RHS function | 1 0.010000 0.010000 -ZZZ Create boundary conditions | 1 0.000000 0.000000 -ZZZ Create facets and facet->cell connectivity | 1 0.080000 0.080000 -ZZZ Create forms | 1 0.000000 0.000000 -ZZZ Create near-nullspace | 1 0.000000 0.000000 -ZZZ FunctionSpace | 1 0.010000 0.010000 -ZZZ Solve | 1 0.450000 0.450000 +[MPI_MAX] Summary of timings | reps wall avg wall tot +--------------------------------------------------------------------------------------------------------- +Build BoxMesh (tetrahedra) | 1 10.010000 10.010000 +Build dofmap data | 2 0.005000 0.010000 +Build sparsity | 1 0.010000 0.010000 +Compute connectivity 2-0 | 1 0.000000 0.000000 +Compute dof reordering map | 2 0.000000 0.000000 +Compute entities of dim = 2 | 1 0.080000 0.080000 +Compute graph partition (SCOTCH) | 1 9.810000 9.810000 +Compute local part of mesh dual graph (mixed) | 2 0.055000 0.110000 +Compute local-to-local map | 1 0.000000 0.000000 +Compute non-local part of mesh dual graph | 1 0.070000 0.070000 +Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 +Distribute fixed-degree adjacency list to destination ranks | 1 0.020000 0.020000 +Distribute row-wise data (scalable) | 1 0.000000 0.000000 +GPS: create_level_structure | 2 0.002500 0.010000 +Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 +Init MPI | 1 0.530000 0.530000 +Init PETSc | 1 0.010000 0.010000 +Init dofmap from element dofmap | 2 0.005000 0.010000 +Init logging | 1 0.000000 0.000000 +PETSc Krylov solver | 1 1.230000 1.230000 +SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 +SCOTCH: call SCOTCH_dgraphPart | 1 9.810000 9.810000 +SparsityPattern::finalize | 1 0.010000 0.010000 +Topology: create | 1 0.030000 0.030000 +Topology: determine shared index ownership | 1 0.020000 0.020000 +Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 +ZZZ Assemble matrix | 1 0.220000 0.220000 +ZZZ Assemble vector | 1 0.000000 0.000000 +ZZZ Create Mesh | 1 10.010000 10.010000 +ZZZ Create RHS function | 1 0.020000 0.020000 +ZZZ Create boundary conditions | 1 0.000000 0.000000 +ZZZ Create facets and facet->cell connectivity | 1 0.080000 0.080000 +ZZZ Create forms | 1 0.000000 0.000000 +ZZZ Create near-nullspace | 1 0.020000 0.020000 +ZZZ FunctionSpace | 1 0.000000 0.000000 +ZZZ Solve | 1 1.230000 1.230000 *** Number of Krylov iterations: 19 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** @@ -2455,17 +2491,17 @@ ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ -/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named ionos5-amd64 with 3 processes, by pbuilder1 on Fri Jan 30 21:18:52 2026 +/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processes, by pbuilder2 on Sun Dec 29 17:07:56 2024 Using Petsc Release Version 3.22.2, Nov 28, 2024 Max Max/Min Avg Total -Time (sec): 8.460e+00 1.000 8.460e+00 +Time (sec): 1.160e+01 1.000 1.160e+01 Objects: 0.000e+00 0.000 0.000e+00 -Flops: 2.239e+08 1.051 2.185e+08 6.556e+08 -Flops/sec: 2.647e+07 1.051 2.583e+07 7.750e+07 -MPI Msg Count: 8.080e+02 1.041 7.870e+02 2.361e+03 -MPI Msg Len (bytes): 7.268e+06 1.303 8.241e+03 1.946e+07 -MPI Reductions: 4.630e+02 1.000 +Flops: 2.241e+08 1.054 2.169e+08 6.508e+08 +Flops/sec: 1.931e+07 1.054 1.869e+07 5.608e+07 +MPI Msg Count: 8.040e+02 1.043 7.823e+02 2.347e+03 +MPI Msg Len (bytes): 7.081e+06 1.265 8.103e+03 1.902e+07 +MPI Reductions: 4.620e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops @@ -2473,7 +2509,7 @@ Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total - 0: Main Stage: 8.4599e+00 100.0% 6.5561e+08 100.0% 2.361e+03 100.0% 8.241e+03 100.0% 4.450e+02 96.1% + 0: Main Stage: 1.1605e+01 100.0% 6.5077e+08 100.0% 2.347e+03 100.0% 8.103e+03 100.0% 4.440e+02 96.1% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. @@ -2497,81 +2533,81 @@ --- Event Stage 0: Main Stage -BuildTwoSided 109 1.0 4.9432e-02 36.1 0.00e+00 0.0 1.8e+02 4.0e+00 1.1e+02 0 0 8 0 24 0 0 8 0 24 0 -BuildTwoSidedF 83 1.0 4.9345e-02 30.6 0.00e+00 0.0 1.1e+02 5.7e+04 8.3e+01 0 0 4 31 18 0 0 4 31 19 0 -MatMult 199 1.0 5.4654e-02 1.0 1.21e+08 1.1 1.2e+03 5.8e+03 0.0e+00 1 53 51 35 0 1 53 51 35 0 6396 -MatMultAdd 40 1.0 5.8074e-03 1.1 9.83e+06 1.0 1.6e+02 1.6e+03 0.0e+00 0 4 7 1 0 0 4 7 1 0 5056 -MatMultTranspose 40 1.0 7.9995e-03 1.1 9.84e+06 1.0 1.6e+02 1.6e+03 0.0e+00 0 4 7 1 0 0 4 7 1 0 3674 -MatSolve 20 0.0 1.3644e-03 0.0 2.27e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1664 -MatLUFactorSym 1 1.0 2.5917e-03 238.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatLUFactorNum 1 1.0 3.6211e-03 241.9 8.29e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2290 -MatScale 6 1.0 5.2241e-04 1.0 5.94e+05 1.0 1.2e+01 1.6e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 3390 -MatResidual 40 1.0 9.9664e-03 1.0 2.37e+07 1.1 2.4e+02 5.5e+03 0.0e+00 0 10 10 7 0 0 10 10 7 0 6812 -MatAssemblyBegin 45 1.0 6.4138e-02 4.0 0.00e+00 0.0 1.1e+02 5.7e+04 2.3e+01 0 0 4 31 5 0 0 4 31 5 0 -MatAssemblyEnd 45 1.0 2.7261e-02 1.0 8.75e+04 1.6 1.7e+02 5.1e+02 9.0e+01 0 0 7 0 19 0 0 7 0 20 8 -MatGetRowIJ 1 0.0 5.0159e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatCreateSubMat 1 1.0 2.1839e-03 1.0 0.00e+00 0.0 4.0e+00 3.9e+02 1.5e+01 0 0 0 0 3 0 0 0 0 3 0 -MatGetOrdering 1 0.0 1.1908e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatCoarsen 2 1.0 8.6229e-04 1.0 0.00e+00 0.0 1.2e+02 8.2e+02 3.8e+01 0 0 5 1 8 0 0 5 1 9 0 -MatZeroEntries 2 1.0 1.4532e-04 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatView 6 1.5 2.9487e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 -MatAXPY 4 1.0 6.0583e-03 1.0 1.17e+05 1.0 2.4e+01 4.1e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 57 -MatTranspose 9 1.0 5.5476e-03 1.1 0.00e+00 0.0 1.0e+02 1.9e+03 2.7e+01 0 0 4 1 6 0 0 4 1 6 0 -MatMatMultSym 6 1.0 3.4014e-02 1.1 0.00e+00 0.0 6.0e+01 1.1e+04 2.0e+01 0 0 3 3 4 0 0 3 3 4 0 -MatMatMultNum 2 1.0 7.0847e-03 1.0 7.11e+06 1.1 1.2e+01 3.3e+04 2.0e+00 0 3 1 2 0 0 3 1 2 0 2875 -MatPtAPSymbolic 2 1.0 1.5052e-01 1.0 0.00e+00 0.0 6.0e+01 6.2e+04 1.4e+01 2 0 3 19 3 2 0 3 19 3 0 -MatPtAPNumeric 2 1.0 1.3749e-01 1.0 6.28e+07 1.1 2.8e+01 1.2e+05 1.2e+01 2 27 1 18 3 2 27 1 18 3 1292 -MatTrnMatMultSym 1 1.0 2.0799e-02 1.0 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01 0 0 2 7 3 0 0 2 7 3 0 -MatGetLocalMat 7 1.0 1.9117e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatGetBrAoCol 6 1.0 2.0317e-03 1.1 0.00e+00 0.0 8.4e+01 4.6e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 -MatCreateGraph 2 1.0 1.3616e-02 1.0 1.54e+05 1.0 1.4e+02 1.6e+03 5.0e+01 0 0 6 1 11 0 0 6 1 11 33 -VecMDot 20 1.0 1.0426e-03 1.4 1.20e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 3439 -VecTDot 40 1.0 7.8873e-04 1.5 8.06e+05 1.0 0.0e+00 0.0e+00 4.0e+01 0 0 0 0 9 0 0 0 0 9 3043 -VecNorm 42 1.0 7.7034e-04 1.3 6.42e+05 1.0 0.0e+00 0.0e+00 4.2e+01 0 0 0 0 9 0 0 0 0 9 2489 -VecScale 22 1.0 5.8134e-05 1.3 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 6168 -VecCopy 124 1.0 3.6339e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecSet 141 1.0 1.6591e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecAXPY 40 1.0 3.3559e-04 1.1 7.87e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 6988 -VecAYPX 258 1.0 1.3370e-03 1.1 2.10e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4709 -VecAXPBYCZ 80 1.0 5.0130e-04 1.0 2.18e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 13005 -VecMAXPY 22 1.0 3.1936e-04 1.1 1.42e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 13269 -VecAssemblyBegin 61 1.0 4.2609e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 13 0 -VecAssemblyEnd 61 1.0 3.6415e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecPointwiseMult 182 1.0 1.1975e-03 1.1 9.92e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2477 -VecScatterBegin 343 1.0 1.3775e-03 1.2 0.00e+00 0.0 1.8e+03 4.6e+03 0.0e+00 0 0 76 42 0 0 0 76 42 0 0 -VecScatterEnd 343 1.0 8.6623e-03 1.9 1.38e+04 1.7 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4 -VecNormalize 22 1.0 3.5833e-04 1.2 3.60e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 3002 -SFSetGraph 26 1.0 1.2587e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetUp 26 1.0 6.2936e-04 1.1 0.00e+00 0.0 2.5e+02 4.9e+02 2.6e+01 0 0 11 1 6 0 0 11 1 6 0 -SFBcastBegin 10 1.0 2.8952e-05 1.1 0.00e+00 0.0 6.0e+01 1.4e+03 0.0e+00 0 0 3 0 0 0 0 3 0 0 0 -SFBcastEnd 10 1.0 2.8497e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFReduceBegin 3 1.0 4.7789e-05 1.0 0.00e+00 0.0 1.5e+01 6.5e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 -SFReduceEnd 3 1.0 1.4253e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFPack 356 1.0 5.0640e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFUnpack 356 1.0 1.0011e-04 1.3 1.38e+04 1.7 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 320 -KSPSetUp 1 1.0 6.4451e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSolve 1 1.0 7.6132e-02 1.0 1.39e+08 1.1 1.4e+03 4.8e+03 8.0e+01 1 62 59 35 17 1 62 59 35 18 5340 -KSPGMRESOrthog 20 1.0 1.3211e-03 1.3 2.40e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 5428 -PCSetUp_GAMG+ 1 1.0 3.6871e-01 1.0 8.55e+07 1.1 9.0e+02 1.3e+04 3.1e+02 4 37 38 59 67 4 37 38 59 70 659 - PCGAMGCreateG 2 1.0 1.3620e-02 1.0 1.54e+05 1.0 1.4e+02 1.6e+03 5.0e+01 0 0 6 1 11 0 0 6 1 11 33 - GAMG Coarsen 4 1.0 2.3042e-02 1.0 0.00e+00 0.0 2.0e+02 7.8e+03 5.5e+01 0 0 8 8 12 0 0 8 8 12 0 - GAMG MIS/Agg 2 1.0 2.1754e-02 1.0 0.00e+00 0.0 1.6e+02 8.4e+03 5.1e+01 0 0 7 7 11 0 0 7 7 11 0 - PCGAMGProl 2 1.0 7.6234e-03 1.0 0.00e+00 0.0 2.6e+02 3.2e+03 7.6e+01 0 0 11 4 16 0 0 11 4 17 0 - GAMG Prol-col 2 1.0 3.0313e-03 1.0 0.00e+00 0.0 2.2e+02 2.6e+03 5.6e+01 0 0 10 3 12 0 0 10 3 13 0 - GAMG Prol-lift 2 1.0 4.3554e-03 1.0 0.00e+00 0.0 3.6e+01 6.7e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 - PCGAMGOptProl 2 1.0 3.3736e-02 1.0 2.25e+07 1.1 1.9e+02 8.8e+03 6.6e+01 0 10 8 9 14 0 10 8 9 15 1926 - GAMG smooth 2 1.0 2.4700e-02 1.0 7.67e+06 1.1 7.2e+01 1.4e+04 2.4e+01 0 3 3 5 5 0 3 3 5 5 892 - PCGAMGCreateL 2 1.0 2.8989e-01 1.0 6.28e+07 1.1 1.1e+02 6.8e+04 6.0e+01 3 27 5 37 13 3 27 5 37 13 613 - GAMG PtAP 2 1.0 2.8745e-01 1.0 6.28e+07 1.1 8.8e+01 8.2e+04 2.6e+01 3 27 4 37 6 3 27 4 37 6 618 - GAMG Reduce 1 1.0 1.0915e-01 1.0 2.38e+07 1.3 4.7e+01 5.5e+04 4.7e+01 1 9 2 13 10 1 9 2 13 11 551 -PCGAMG Squ l00 1 1.0 2.0801e-02 1.0 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01 0 0 2 7 3 0 0 2 7 3 0 -PCGAMG Gal l00 1 1.0 1.8089e-01 1.0 3.98e+07 1.0 6.0e+01 7.7e+04 1.3e+01 2 18 3 24 3 2 18 3 24 3 649 -PCGAMG Opt l00 1 1.0 1.6871e-02 1.0 5.03e+06 1.0 3.6e+01 2.2e+04 1.1e+01 0 2 2 4 2 0 2 2 4 2 890 -PCGAMG Gal l01 1 1.0 1.0671e-01 1.0 2.38e+07 1.3 2.8e+01 9.2e+04 1.3e+01 1 9 1 13 3 1 9 1 13 3 564 -PCGAMG Opt l01 1 1.0 5.1987e-03 1.0 2.08e+06 1.3 3.6e+01 6.8e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 1029 -PCSetUp 1 1.0 3.6872e-01 1.0 8.55e+07 1.1 9.0e+02 1.3e+04 3.1e+02 4 37 38 59 67 4 37 38 59 70 659 -PCSetUpOnBlocks 20 1.0 6.4688e-03 36.8 8.29e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1282 -PCApply 20 1.0 6.7991e-02 1.0 1.21e+08 1.1 1.3e+03 4.5e+03 2.0e+01 1 54 54 30 4 1 54 54 30 4 5186 +BuildTwoSided 109 1.0 9.3954e-02 3.5 0.00e+00 0.0 1.8e+02 4.0e+00 1.1e+02 0 0 7 0 24 0 0 7 0 25 0 +BuildTwoSidedF 83 1.0 9.4858e-02 3.5 0.00e+00 0.0 9.8e+01 5.9e+04 8.3e+01 1 0 4 31 18 1 0 4 31 19 0 +MatMult 199 1.0 3.6456e-01 1.0 1.22e+08 1.1 1.2e+03 5.7e+03 0.0e+00 3 54 51 36 0 3 54 51 36 0 958 +MatMultAdd 40 1.0 4.0565e-02 1.1 1.00e+07 1.0 1.6e+02 1.6e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 723 +MatMultTranspose 40 1.0 4.8503e-02 1.1 1.00e+07 1.0 1.6e+02 1.6e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 605 +MatSolve 20 0.0 5.1663e-03 0.0 1.99e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 386 +MatLUFactorSym 1 1.0 2.3961e-03 82.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatLUFactorNum 1 1.0 5.9441e-03 785.5 6.55e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1101 +MatScale 6 1.0 1.8148e-03 1.1 6.04e+05 1.0 1.2e+01 1.6e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 975 +MatResidual 40 1.0 6.6519e-02 1.1 2.38e+07 1.1 2.4e+02 5.4e+03 0.0e+00 1 10 10 7 0 1 10 10 7 0 1019 +MatAssemblyBegin 45 1.0 1.1204e-01 2.0 0.00e+00 0.0 9.8e+01 5.9e+04 2.3e+01 1 0 4 31 5 1 0 4 31 5 0 +MatAssemblyEnd 45 1.0 6.4314e-02 1.1 8.16e+04 1.3 1.7e+02 5.1e+02 9.0e+01 1 0 7 0 19 1 0 7 0 20 3 +MatGetRowIJ 1 0.0 8.4018e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatCreateSubMat 1 1.0 4.8192e-03 1.0 0.00e+00 0.0 4.0e+00 3.7e+02 1.5e+01 0 0 0 0 3 0 0 0 0 3 0 +MatGetOrdering 1 0.0 2.5844e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatCoarsen 2 1.0 2.3555e-03 1.0 0.00e+00 0.0 1.2e+02 8.4e+02 3.7e+01 0 0 5 1 8 0 0 5 1 8 0 +MatZeroEntries 2 1.0 5.1361e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatView 6 1.5 2.2895e-03 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 +MatAXPY 4 1.0 1.7353e-02 1.0 1.19e+05 1.0 2.4e+01 4.0e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 20 +MatTranspose 9 1.0 1.1999e-02 1.1 0.00e+00 0.0 1.0e+02 1.8e+03 2.7e+01 0 0 4 1 6 0 0 4 1 6 0 +MatMatMultSym 6 1.0 7.2278e-02 1.1 0.00e+00 0.0 6.0e+01 1.0e+04 2.0e+01 1 0 3 3 4 1 0 3 3 5 0 +MatMatMultNum 2 1.0 1.7499e-02 1.0 7.13e+06 1.1 1.2e+01 3.3e+04 2.0e+00 0 3 1 2 0 0 3 1 2 0 1162 +MatPtAPSymbolic 2 1.0 2.4811e-01 1.0 0.00e+00 0.0 6.0e+01 6.1e+04 1.4e+01 2 0 3 19 3 2 0 3 19 3 0 +MatPtAPNumeric 2 1.0 2.8456e-01 1.0 6.19e+07 1.1 2.8e+01 1.2e+05 1.2e+01 2 27 1 17 3 2 27 1 17 3 616 +MatTrnMatMultSym 1 1.0 4.6199e-02 1.0 0.00e+00 0.0 4.2e+01 3.0e+04 1.3e+01 0 0 2 7 3 0 0 2 7 3 0 +MatGetLocalMat 7 1.0 6.5050e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatGetBrAoCol 6 1.0 5.9455e-03 1.1 0.00e+00 0.0 8.4e+01 4.5e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 +MatCreateGraph 2 1.0 4.3775e-02 1.0 1.55e+05 1.0 1.4e+02 1.6e+03 5.0e+01 0 0 6 1 11 0 0 6 1 11 10 +VecMDot 20 1.0 2.4947e-03 1.2 1.23e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 1439 +VecTDot 40 1.0 3.3829e-03 1.8 8.11e+05 1.0 0.0e+00 0.0e+00 4.0e+01 0 0 0 0 9 0 0 0 0 9 709 +VecNorm 42 1.0 4.4963e-03 2.1 6.51e+05 1.0 0.0e+00 0.0e+00 4.2e+01 0 0 0 0 9 0 0 0 0 9 427 +VecScale 22 1.0 1.4717e-04 1.1 1.23e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2439 +VecCopy 124 1.0 2.0013e-03 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecSet 141 1.0 1.0764e-03 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecAXPY 40 1.0 2.0638e-03 1.3 7.93e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1136 +VecAYPX 258 1.0 7.3478e-03 1.5 2.15e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 857 +VecAXPBYCZ 80 1.0 2.8234e-03 1.4 2.23e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2311 +VecMAXPY 22 1.0 6.7781e-04 1.1 1.45e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 6258 +VecAssemblyBegin 61 1.0 2.4686e-03 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 14 0 +VecAssemblyEnd 61 1.0 1.9484e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecPointwiseMult 182 1.0 6.8808e-03 1.1 1.01e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 432 +VecScatterBegin 343 1.0 9.1361e-03 1.4 0.00e+00 0.0 1.8e+03 4.5e+03 0.0e+00 0 0 76 42 0 0 0 76 42 0 0 +VecScatterEnd 343 1.0 1.0827e-01 2.7 1.32e+04 1.5 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 +VecNormalize 22 1.0 1.2330e-03 1.2 3.68e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 873 +SFSetGraph 26 1.0 2.7205e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetUp 26 1.0 1.8641e-03 1.1 0.00e+00 0.0 2.5e+02 4.9e+02 2.6e+01 0 0 11 1 6 0 0 11 1 6 0 +SFBcastBegin 9 1.0 1.2366e-04 1.2 0.00e+00 0.0 5.4e+01 1.5e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 +SFBcastEnd 9 1.0 1.9539e-04 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFReduceBegin 3 1.0 8.5765e-05 1.0 0.00e+00 0.0 1.5e+01 6.4e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 +SFReduceEnd 3 1.0 5.6307e-05 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFPack 355 1.0 3.4403e-03 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFUnpack 355 1.0 7.0504e-04 1.2 1.32e+04 1.5 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 45 +KSPSetUp 1 1.0 1.4322e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSolve 1 1.0 4.7554e-01 1.0 1.37e+08 1.1 1.4e+03 4.8e+03 8.0e+01 4 62 59 35 17 4 62 59 35 18 850 +KSPGMRESOrthog 20 1.0 3.1802e-03 1.1 2.45e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 2257 +PCSetUp_GAMG+ 1 1.0 7.5328e-01 1.0 8.47e+07 1.1 8.9e+02 1.3e+04 3.1e+02 6 37 38 59 67 6 37 38 59 70 320 + PCGAMGCreateG 2 1.0 4.3788e-02 1.0 1.55e+05 1.0 1.4e+02 1.6e+03 5.0e+01 0 0 6 1 11 0 0 6 1 11 10 + GAMG Coarsen 4 1.0 5.1694e-02 1.0 0.00e+00 0.0 1.9e+02 7.9e+03 5.4e+01 0 0 8 8 12 0 0 8 8 12 0 + GAMG MIS/Agg 2 1.0 4.8767e-02 1.0 0.00e+00 0.0 1.6e+02 8.5e+03 5.0e+01 0 0 7 7 11 0 0 7 7 11 0 + PCGAMGProl 2 1.0 2.0915e-02 1.0 0.00e+00 0.0 2.6e+02 3.1e+03 7.6e+01 0 0 11 4 16 0 0 11 4 17 0 + GAMG Prol-col 2 1.0 9.0313e-03 1.0 0.00e+00 0.0 2.2e+02 2.6e+03 5.6e+01 0 0 10 3 12 0 0 10 3 13 0 + GAMG Prol-lift 2 1.0 1.1199e-02 1.0 0.00e+00 0.0 3.6e+01 6.2e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 + PCGAMGOptProl 2 1.0 9.7225e-02 1.0 2.27e+07 1.1 1.9e+02 8.7e+03 6.6e+01 1 10 8 9 14 1 10 8 9 15 667 + GAMG smooth 2 1.0 6.2109e-02 1.0 7.70e+06 1.1 7.2e+01 1.4e+04 2.4e+01 1 3 3 5 5 1 3 3 5 5 354 + PCGAMGCreateL 2 1.0 5.3757e-01 1.0 6.19e+07 1.1 1.1e+02 6.5e+04 6.0e+01 5 27 5 37 13 5 27 5 37 14 326 + GAMG PtAP 2 1.0 5.3210e-01 1.0 6.19e+07 1.1 8.8e+01 7.9e+04 2.6e+01 5 27 4 37 6 5 27 4 37 6 330 + GAMG Reduce 1 1.0 1.8818e-01 1.0 2.26e+07 1.4 4.7e+01 5.1e+04 4.7e+01 2 9 2 13 10 2 9 2 13 11 308 +PCGAMG Squ l00 1 1.0 4.6206e-02 1.0 0.00e+00 0.0 4.2e+01 3.0e+04 1.3e+01 0 0 2 7 3 0 0 2 7 3 0 +PCGAMG Gal l00 1 1.0 3.4938e-01 1.0 3.93e+07 1.0 6.0e+01 7.6e+04 1.3e+01 3 18 3 24 3 3 18 3 24 3 336 +PCGAMG Opt l00 1 1.0 4.1759e-02 1.0 5.07e+06 1.0 3.6e+01 2.1e+04 1.1e+01 0 2 2 4 2 0 2 2 4 2 360 +PCGAMG Gal l01 1 1.0 1.8272e-01 1.0 2.26e+07 1.4 2.8e+01 8.5e+04 1.3e+01 2 9 1 13 3 2 9 1 13 3 317 +PCGAMG Opt l01 1 1.0 1.1802e-02 1.0 2.06e+06 1.3 3.6e+01 6.9e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 450 +PCSetUp 1 1.0 7.5329e-01 1.0 8.47e+07 1.1 8.9e+02 1.3e+04 3.1e+02 6 37 38 59 67 6 37 38 59 70 320 +PCSetUpOnBlocks 20 1.0 9.1604e-03 16.0 6.55e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 715 +PCApply 20 1.0 4.1602e-01 1.0 1.19e+08 1.1 1.3e+03 4.5e+03 2.0e+01 4 54 55 30 4 4 54 55 30 5 842 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. @@ -2594,9 +2630,9 @@ Discrete System 4 4 Weak Form 4 4 ======================================================================================================================== -Average time to get PetscTime(): 5.21e-08 -Average time for MPI_Barrier(): 1.586e-06 -Average time for zero size MPI_Send(): 1.05467e-06 +Average time to get PetscTime(): 3.178e-07 +Average time for MPI_Barrier(): 4.468e-06 +Average time for zero size MPI_Send(): 4.219e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type elasticity # (source: command line) @@ -2660,67 +2696,67 @@ Option left: name:--scaling_type value: weak source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line ==== elasticity strong scaling (3 processes with ndofs=30000) ==== -[2026-01-30 21:18:53.169] [RANK: 0] [info] Using partitioner with 69312 cell data -[2026-01-30 21:18:53.169] [RANK: 0] [info] Compute partition of cells across ranks -[2026-01-30 21:18:53.169] [RANK: 0] [info] Building mesh dual graph -[2026-01-30 21:18:53.169] [RANK: 0] [info] Build local part of mesh dual graph (mixed) -[2026-01-30 21:18:53.190] [RANK: 0] [info] Build nonlocal part of mesh dual graph -[2026-01-30 21:18:53.190] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:18:53.190] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:18:53.190] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 -[2026-01-30 21:18:53.191] [RANK: 0] [info] Graph edges (local: 66332, non-local: 962) -[2026-01-30 21:18:53.191] [RANK: 0] [info] Compute graph partition using PT-SCOTCH -[2026-01-30 21:19:00.865] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -[2026-01-30 21:19:00.865] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -[2026-01-30 21:19:00.867] [RANK: 0] [info] Extract basic topology: 69240->69240 -[2026-01-30 21:19:00.867] [RANK: 0] [info] Build local dual graph -[2026-01-30 21:19:00.867] [RANK: 0] [info] Build local part of mesh dual graph (mixed) -[2026-01-30 21:19:00.886] [RANK: 0] [info] GPS pseudo-diameter:(119) 16820-1311 -[2026-01-30 21:19:00.888] [RANK: 0] [info] Create topology (single cell type) -[2026-01-30 21:19:00.888] [RANK: 0] [info] Create topology (generalised) -[2026-01-30 21:19:00.889] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -[2026-01-30 21:19:00.890] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -[2026-01-30 21:19:00.894] [RANK: 0] [info] Compute ghost indices -[2026-01-30 21:19:00.894] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 -[2026-01-30 21:19:00.895] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 -[2026-01-30 21:19:00.896] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -[2026-01-30 21:19:00.896] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -[2026-01-30 21:19:00.902] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:00.902] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:00.902] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:00.902] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:00.904] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -[2026-01-30 21:19:00.904] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -[2026-01-30 21:19:00.904] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 -[2026-01-30 21:19:00.904] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:00.904] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:00.904] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 -[2026-01-30 21:19:00.904] [RANK: 0] [info] Checking required entities per dimension -[2026-01-30 21:19:00.904] [RANK: 0] [info] Cell type: 0 dofmap: 17310x4 -[2026-01-30 21:19:00.907] [RANK: 0] [info] Global index computation -[2026-01-30 21:19:00.908] [RANK: 0] [info] Got 1 index_maps -[2026-01-30 21:19:00.908] [RANK: 0] [info] Get global indices -[2026-01-30 21:19:00.908] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:00.908] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:07:57.394] [RANK: 0] [info] Using partitioner with 69312 cell data +[2024-12-29 17:07:57.395] [RANK: 0] [info] Compute partition of cells across ranks +[2024-12-29 17:07:57.395] [RANK: 0] [info] Building mesh dual graph +[2024-12-29 17:07:57.395] [RANK: 0] [info] Build local part of mesh dual graph (mixed) +[2024-12-29 17:07:57.425] [RANK: 0] [info] Build nonlocal part of mesh dual graph +[2024-12-29 17:07:57.452] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:07:57.452] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:07:57.452] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 +[2024-12-29 17:07:57.455] [RANK: 0] [info] Graph edges (local: 66332, non-local: 962) +[2024-12-29 17:07:57.455] [RANK: 0] [info] Compute graph partition using PT-SCOTCH +[2024-12-29 17:08:10.386] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +[2024-12-29 17:08:10.436] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +[2024-12-29 17:08:10.536] [RANK: 0] [info] Extract basic topology: 69480->69480 +[2024-12-29 17:08:10.536] [RANK: 0] [info] Build local dual graph +[2024-12-29 17:08:10.536] [RANK: 0] [info] Build local part of mesh dual graph (mixed) +[2024-12-29 17:08:10.640] [RANK: 0] [info] GPS pseudo-diameter:(120) 640-16176 +[2024-12-29 17:08:10.654] [RANK: 0] [info] Create topology (single cell type) +[2024-12-29 17:08:10.654] [RANK: 0] [info] Create topology (generalised) +[2024-12-29 17:08:10.676] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +[2024-12-29 17:08:10.700] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +[2024-12-29 17:08:10.862] [RANK: 0] [info] Compute ghost indices +[2024-12-29 17:08:10.862] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 +[2024-12-29 17:08:10.884] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 +[2024-12-29 17:08:10.962] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +[2024-12-29 17:08:10.976] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +[2024-12-29 17:08:11.250] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:11.272] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:11.308] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:11.332] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:11.410] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +[2024-12-29 17:08:11.412] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +[2024-12-29 17:08:11.412] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 +[2024-12-29 17:08:11.413] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:11.414] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:11.414] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 +[2024-12-29 17:08:11.414] [RANK: 0] [info] Checking required entities per dimension +[2024-12-29 17:08:11.414] [RANK: 0] [info] Cell type: 0 dofmap: 17370x4 +[2024-12-29 17:08:11.418] [RANK: 0] [info] Global index computation +[2024-12-29 17:08:11.418] [RANK: 0] [info] Got 1 index_maps +[2024-12-29 17:08:11.418] [RANK: 0] [info] Get global indices +[2024-12-29 17:08:11.419] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:11.419] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (24x19x19) to be refined 0 times -[2026-01-30 21:19:00.909] [RANK: 0] [info] Computing mesh entities of dimension 2 -[2026-01-30 21:19:00.931] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:00.932] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:00.997] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:00.998] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:00.999] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) -[2026-01-30 21:19:00.999] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. -[2026-01-30 21:19:01.000] [RANK: 0] [info] Checking required entities per dimension -[2026-01-30 21:19:01.000] [RANK: 0] [info] Cell type: 0 dofmap: 17310x4 -[2026-01-30 21:19:01.002] [RANK: 0] [info] Global index computation -[2026-01-30 21:19:01.003] [RANK: 0] [info] Got 1 index_maps -[2026-01-30 21:19:01.003] [RANK: 0] [info] Get global indices -[2026-01-30 21:19:01.003] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:01.003] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:01.003] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) -[2026-01-30 21:19:01.004] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) -[2026-01-30 21:19:01.004] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) -[2026-01-30 21:19:01.024] [RANK: 0] [info] Column ghost size increased from 223 to 560 +[2024-12-29 17:08:11.430] [RANK: 0] [info] Computing mesh entities of dimension 2 +[2024-12-29 17:08:11.467] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:11.468] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:11.589] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:11.589] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:11.593] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) +[2024-12-29 17:08:11.593] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. +[2024-12-29 17:08:11.604] [RANK: 0] [info] Checking required entities per dimension +[2024-12-29 17:08:11.605] [RANK: 0] [info] Cell type: 0 dofmap: 17370x4 +[2024-12-29 17:08:11.656] [RANK: 0] [info] Global index computation +[2024-12-29 17:08:11.657] [RANK: 0] [info] Got 1 index_maps +[2024-12-29 17:08:11.657] [RANK: 0] [info] Get global indices +[2024-12-29 17:08:11.720] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:11.721] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:11.722] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) +[2024-12-29 17:08:11.723] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) +[2024-12-29 17:08:11.723] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) +[2024-12-29 17:08:11.902] [RANK: 0] [info] Column ghost size increased from 219 to 540 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.9.0 @@ -2734,7 +2770,7 @@ Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- -[2026-01-30 21:19:01.138] [RANK: 0] [info] PETSc Krylov solver starting to solve system. +[2024-12-29 17:08:12.799] [RANK: 0] [info] PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero @@ -2755,12 +2791,12 @@ MatCoarsen Object: 3 MPI processes type: misk Number smoothing steps to construct prolongation 1 - Complexity: grid = 1.093 operator = 1.3807 + Complexity: grid = 1.0928 operator = 1.37999 Per-level complexity: op = operator, int = interpolation #equations | #active PEs | avg nnz/row op | avg nnz/row int - 222 1 177 0 - 2568 3 171 37 - 30000 3 42 22 + 246 1 201 0 + 2538 3 168 41 + 30000 3 42 21 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly @@ -2785,35 +2821,35 @@ tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd - factor fill ratio given 5., needed 1.13774 + factor fill ratio given 5., needed 1.11087 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij - rows=222, cols=222, bs=6 + rows=246, cols=246, bs=6 package used to perform factorization: petsc - total: nonzeros=44604, allocated nonzeros=44604 - using I-node routines: found 62 nodes, limit used is 5 + total: nonzeros=54828, allocated nonzeros=54828 + using I-node routines: found 61 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij - rows=222, cols=222, bs=6 - total: nonzeros=39204, allocated nonzeros=39204 + rows=246, cols=246, bs=6 + total: nonzeros=49356, allocated nonzeros=49356 total number of mallocs used during MatSetValues calls=0 - using I-node routines: found 74 nodes, limit used is 5 + using I-node routines: found 81 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij - rows=222, cols=222, bs=6 - total: nonzeros=39204, allocated nonzeros=39204 + rows=246, cols=246, bs=6 + total: nonzeros=49356, allocated nonzeros=49356 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation - using I-node (on process 0) routines: found 74 nodes, limit used is 5 + using I-node (on process 0) routines: found 81 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind - eigenvalue targets used: min 0.272376, max 2.99613 - eigenvalues provided (min 0.032285, max 2.72376) with transform: [0. 0.1; 0. 1.1] + eigenvalue targets used: min 0.334259, max 3.67685 + eigenvalues provided (min 0.0104942, max 3.34259) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning @@ -2824,18 +2860,18 @@ linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij - rows=2568, cols=2568, bs=6 - total: nonzeros=437256, allocated nonzeros=437256 + rows=2538, cols=2538, bs=6 + total: nonzeros=426204, allocated nonzeros=426204 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation - using I-node (on process 0) routines: found 266 nodes, limit used is 5 + using I-node (on process 0) routines: found 264 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind - eigenvalue targets used: min 0.259184, max 2.85103 - eigenvalues provided (min 0.072453, max 2.59184) with transform: [0. 0.1; 0. 1.1] + eigenvalue targets used: min 0.258051, max 2.83856 + eigenvalues provided (min 0.0713077, max 2.58051) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning @@ -2850,7 +2886,7 @@ total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space - using I-node (on process 0) routines: found 3390 nodes, limit used is 5 + using I-node (on process 0) routines: found 3395 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes @@ -2859,46 +2895,46 @@ total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space - using I-node (on process 0) routines: found 3390 nodes, limit used is 5 + using I-node (on process 0) routines: found 3395 nodes, limit used is 5 -[MPI_MAX] Summary of timings | reps wall avg wall tot -------------------------------------------------------------------------------------------------------- -Build BoxMesh (tetrahedra) | 1 7.740000 7.740000 -Build dofmap data | 2 0.005000 0.010000 -Build sparsity | 1 0.010000 0.010000 -Compute connectivity 2-0 | 1 0.010000 0.010000 -Compute dof reordering map | 2 0.000000 0.000000 -Compute entities of dim = 2 | 1 0.090000 0.090000 -Compute graph partition (SCOTCH) | 1 7.680000 7.680000 -Compute local part of mesh dual graph (mixed) | 2 0.020000 0.040000 -Compute local-to-local map | 1 0.000000 0.000000 -Compute non-local part of mesh dual graph | 1 0.000000 0.000000 -Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 -Distribute fixed-degree adjacency list to destination ranks | 1 0.010000 0.010000 -Distribute row-wise data (scalable) | 1 0.000000 0.000000 -GPS: create_level_structure | 2 0.001667 0.010000 -Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 -Init MPI | 1 0.020000 0.020000 -Init PETSc | 1 0.000000 0.000000 -Init dofmap from element dofmap | 2 0.005000 0.010000 -Init logging | 1 0.000000 0.000000 -PETSc Krylov solver | 1 0.450000 0.450000 -SCOTCH: call SCOTCH_dgraphBuild | 1 0.010000 0.010000 -SCOTCH: call SCOTCH_dgraphPart | 1 7.670000 7.670000 -SparsityPattern::finalize | 1 0.010000 0.010000 -Topology: create | 1 0.020000 0.020000 -Topology: determine shared index ownership | 1 0.000000 0.000000 -Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.000000 0.000000 -ZZZ Assemble matrix | 1 0.100000 0.100000 -ZZZ Assemble vector | 1 0.010000 0.010000 -ZZZ Create Mesh | 1 7.740000 7.740000 -ZZZ Create RHS function | 1 0.010000 0.010000 -ZZZ Create boundary conditions | 1 0.000000 0.000000 -ZZZ Create facets and facet->cell connectivity | 1 0.100000 0.100000 -ZZZ Create forms | 1 0.000000 0.000000 -ZZZ Create near-nullspace | 1 0.000000 0.000000 -ZZZ FunctionSpace | 1 0.010000 0.010000 -ZZZ Solve | 1 0.450000 0.450000 +[MPI_MAX] Summary of timings | reps wall avg wall tot +--------------------------------------------------------------------------------------------------------- +Build BoxMesh (tetrahedra) | 1 14.040000 14.040000 +Build dofmap data | 2 0.070000 0.140000 +Build sparsity | 1 0.080000 0.080000 +Compute connectivity 2-0 | 1 0.000000 0.000000 +Compute dof reordering map | 2 0.000000 0.000000 +Compute entities of dim = 2 | 1 0.160000 0.160000 +Compute graph partition (SCOTCH) | 1 12.930000 12.930000 +Compute local part of mesh dual graph (mixed) | 2 0.075000 0.150000 +Compute local-to-local map | 1 0.000000 0.000000 +Compute non-local part of mesh dual graph | 1 0.030000 0.030000 +Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 +Distribute fixed-degree adjacency list to destination ranks | 1 0.150000 0.150000 +Distribute row-wise data (scalable) | 1 0.000000 0.000000 +GPS: create_level_structure | 6 0.002500 0.010000 +Gibbs-Poole-Stockmeyer ordering | 1 0.020000 0.020000 +Init MPI | 1 0.370000 0.370000 +Init PETSc | 1 0.010000 0.010000 +Init dofmap from element dofmap | 2 0.035000 0.070000 +Init logging | 1 0.000000 0.000000 +PETSc Krylov solver | 1 4.080000 4.080000 +SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 +SCOTCH: call SCOTCH_dgraphPart | 1 12.920000 12.920000 +SparsityPattern::finalize | 1 0.060000 0.060000 +Topology: create | 1 0.740000 0.740000 +Topology: determine shared index ownership | 1 0.200000 0.200000 +Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 +ZZZ Assemble matrix | 1 0.780000 0.780000 +ZZZ Assemble vector | 1 0.030000 0.030000 +ZZZ Create Mesh | 1 14.040000 14.040000 +ZZZ Create RHS function | 1 0.080000 0.080000 +ZZZ Create boundary conditions | 1 0.020000 0.020000 +ZZZ Create facets and facet->cell connectivity | 1 0.160000 0.160000 +ZZZ Create forms | 1 0.000000 0.000000 +ZZZ Create near-nullspace | 1 0.030000 0.030000 +ZZZ FunctionSpace | 1 0.130000 0.130000 +ZZZ Solve | 1 4.100000 4.100000 *** Number of Krylov iterations: 19 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** @@ -2907,17 +2943,17 @@ ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ -/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named ionos5-amd64 with 3 processes, by pbuilder1 on Fri Jan 30 21:19:01 2026 +/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processes, by pbuilder2 on Sun Dec 29 17:08:16 2024 Using Petsc Release Version 3.22.2, Nov 28, 2024 Max Max/Min Avg Total -Time (sec): 8.419e+00 1.000 8.419e+00 +Time (sec): 1.949e+01 1.000 1.949e+01 Objects: 0.000e+00 0.000 0.000e+00 -Flops: 2.269e+08 1.092 2.147e+08 6.440e+08 -Flops/sec: 2.695e+07 1.092 2.550e+07 7.649e+07 -MPI Msg Count: 8.060e+02 1.043 7.843e+02 2.353e+03 -MPI Msg Len (bytes): 7.728e+06 1.433 7.987e+03 1.879e+07 -MPI Reductions: 4.630e+02 1.000 +Flops: 2.253e+08 1.068 2.171e+08 6.513e+08 +Flops/sec: 1.156e+07 1.068 1.114e+07 3.342e+07 +MPI Msg Count: 8.020e+02 1.044 7.803e+02 2.341e+03 +MPI Msg Len (bytes): 7.304e+06 1.318 8.175e+03 1.914e+07 +MPI Reductions: 4.610e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops @@ -2925,7 +2961,7 @@ Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total - 0: Main Stage: 8.4189e+00 100.0% 6.4398e+08 100.0% 2.353e+03 100.0% 7.987e+03 100.0% 4.450e+02 96.1% + 0: Main Stage: 1.9492e+01 100.0% 6.5132e+08 100.0% 2.341e+03 100.0% 8.175e+03 100.0% 4.430e+02 96.1% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. @@ -2949,81 +2985,81 @@ --- Event Stage 0: Main Stage -BuildTwoSided 109 1.0 5.6716e-02 42.3 0.00e+00 0.0 1.8e+02 4.0e+00 1.1e+02 0 0 7 0 24 0 0 7 0 24 0 -BuildTwoSidedF 83 1.0 5.6535e-02 27.2 0.00e+00 0.0 9.8e+01 5.8e+04 8.3e+01 0 0 4 30 18 0 0 4 30 19 0 -MatMult 199 1.0 5.1360e-02 1.0 1.23e+08 1.1 1.2e+03 5.7e+03 0.0e+00 1 54 51 36 0 1 54 51 36 0 6776 -MatMultAdd 40 1.0 4.5017e-03 1.1 1.00e+07 1.1 1.6e+02 1.6e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 6453 -MatMultTranspose 40 1.0 6.9876e-03 1.1 1.00e+07 1.1 1.6e+02 1.6e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 4162 -MatSolve 20 0.0 7.0829e-04 0.0 1.78e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2513 -MatLUFactorSym 1 1.0 1.9723e-03 117.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatLUFactorNum 1 1.0 2.4615e-03 1269.5 5.71e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2318 -MatScale 6 1.0 5.5161e-04 1.1 6.04e+05 1.1 1.2e+01 1.6e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 3181 -MatResidual 40 1.0 9.8144e-03 1.0 2.40e+07 1.1 2.4e+02 5.4e+03 0.0e+00 0 10 10 7 0 0 10 10 7 0 6883 -MatAssemblyBegin 45 1.0 7.2292e-02 4.1 0.00e+00 0.0 9.8e+01 5.8e+04 2.3e+01 1 0 4 30 5 1 0 4 30 5 0 -MatAssemblyEnd 45 1.0 2.7018e-02 1.0 9.17e+04 2.0 1.7e+02 5.0e+02 9.0e+01 0 0 7 0 19 0 0 7 0 20 8 -MatGetRowIJ 1 0.0 3.6356e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatCreateSubMat 1 1.0 2.3971e-03 1.0 0.00e+00 0.0 4.0e+00 3.4e+02 1.5e+01 0 0 0 0 3 0 0 0 0 3 0 -MatGetOrdering 1 0.0 9.7751e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatCoarsen 2 1.0 8.8766e-04 1.0 0.00e+00 0.0 1.2e+02 8.0e+02 3.8e+01 0 0 5 1 8 0 0 5 1 9 0 -MatZeroEntries 2 1.0 1.2893e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatView 6 1.5 8.0717e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 -MatAXPY 4 1.0 5.9811e-03 1.0 1.17e+05 1.0 2.4e+01 4.0e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 58 -MatTranspose 9 1.0 7.2964e-03 1.2 0.00e+00 0.0 1.0e+02 1.9e+03 2.7e+01 0 0 4 1 6 0 0 4 1 6 0 -MatMatMultSym 6 1.0 3.4803e-02 1.1 0.00e+00 0.0 6.0e+01 1.0e+04 2.0e+01 0 0 3 3 4 0 0 3 3 4 0 -MatMatMultNum 2 1.0 7.7165e-03 1.0 7.20e+06 1.1 1.2e+01 3.3e+04 2.0e+00 0 3 1 2 0 0 3 1 2 0 2626 -MatPtAPSymbolic 2 1.0 1.5371e-01 1.0 0.00e+00 0.0 6.0e+01 5.9e+04 1.4e+01 2 0 3 19 3 2 0 3 19 3 0 -MatPtAPNumeric 2 1.0 1.4041e-01 1.0 6.39e+07 1.3 2.8e+01 1.1e+05 1.2e+01 2 27 1 17 3 2 27 1 17 3 1220 -MatTrnMatMultSym 1 1.0 2.1003e-02 1.0 0.00e+00 0.0 4.2e+01 3.0e+04 1.3e+01 0 0 2 7 3 0 0 2 7 3 0 -MatGetLocalMat 7 1.0 2.3523e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatGetBrAoCol 6 1.0 2.3381e-03 1.0 0.00e+00 0.0 8.4e+01 4.5e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 -MatCreateGraph 2 1.0 1.3506e-02 1.0 1.55e+05 1.0 1.4e+02 1.6e+03 5.0e+01 0 0 6 1 11 0 0 6 1 11 34 -VecMDot 20 1.0 1.0456e-03 1.5 1.21e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 3426 -VecTDot 40 1.0 8.2835e-04 1.5 8.14e+05 1.0 0.0e+00 0.0e+00 4.0e+01 0 0 0 0 9 0 0 0 0 9 2897 -VecNorm 42 1.0 9.4160e-04 1.9 6.48e+05 1.0 0.0e+00 0.0e+00 4.2e+01 0 0 0 0 9 0 0 0 0 9 2035 -VecScale 22 1.0 5.7501e-05 1.3 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 6230 -VecCopy 124 1.0 3.4300e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecSet 141 1.0 1.3701e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecAXPY 40 1.0 2.7151e-04 1.1 7.95e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 8637 -VecAYPX 258 1.0 1.1434e-03 1.0 2.12e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 5502 -VecAXPBYCZ 80 1.0 5.0291e-04 1.0 2.19e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 12952 -VecMAXPY 22 1.0 3.1930e-04 1.1 1.43e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 13260 -VecAssemblyBegin 61 1.0 6.2104e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 13 0 -VecAssemblyEnd 61 1.0 3.7617e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecPointwiseMult 182 1.0 9.4325e-04 1.0 9.98e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 3142 -VecScatterBegin 343 1.0 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1.1138e-01 1.0 0.00e+00 0.0 2.6e+02 3.1e+03 7.6e+01 1 0 11 4 16 1 0 11 4 17 0 + GAMG Prol-col 2 1.0 4.2155e-02 1.0 0.00e+00 0.0 2.2e+02 2.6e+03 5.6e+01 0 0 10 3 12 0 0 10 3 13 0 + GAMG Prol-lift 2 1.0 6.8607e-02 1.0 0.00e+00 0.0 3.6e+01 6.3e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 + PCGAMGOptProl 2 1.0 6.3764e-01 1.0 2.22e+07 1.1 1.9e+02 8.6e+03 6.6e+01 3 10 8 9 14 3 10 8 9 15 101 + GAMG smooth 2 1.0 2.4797e-01 1.0 7.57e+06 1.1 7.2e+01 1.4e+04 2.4e+01 1 3 3 5 5 1 3 3 5 5 88 + PCGAMGCreateL 2 1.0 2.1356e+00 1.0 6.60e+07 1.2 1.1e+02 6.7e+04 6.0e+01 11 27 5 37 13 11 27 5 37 14 83 + GAMG PtAP 2 1.0 2.0614e+00 1.0 6.60e+07 1.2 8.8e+01 8.1e+04 2.6e+01 11 27 4 37 6 11 27 4 37 6 86 + GAMG Reduce 1 1.0 4.3042e-01 1.0 2.77e+07 1.8 4.7e+01 5.6e+04 4.7e+01 2 10 2 14 10 2 10 2 14 11 147 +PCGAMG Squ l00 1 1.0 1.8452e-01 1.0 0.00e+00 0.0 4.2e+01 3.0e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 +PCGAMG Gal l00 1 1.0 1.7103e+00 1.0 3.86e+07 1.0 6.0e+01 7.6e+04 1.3e+01 9 18 3 24 3 9 18 3 24 3 67 +PCGAMG Opt l00 1 1.0 1.8113e-01 1.0 5.05e+06 1.0 3.6e+01 2.1e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 83 +PCGAMG Gal l01 1 1.0 3.5624e-01 1.0 2.77e+07 1.8 2.8e+01 9.3e+04 1.3e+01 2 10 1 14 3 2 10 1 14 3 177 +PCGAMG Opt l01 1 1.0 4.1963e-02 1.0 2.03e+06 1.4 3.6e+01 6.5e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 122 +PCSetUp 1 1.0 3.2251e+00 1.0 8.83e+07 1.2 8.9e+02 1.3e+04 3.1e+02 17 37 38 59 67 17 37 38 59 70 75 +PCSetUpOnBlocks 20 1.0 2.8157e-02 45.5 7.72e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 274 +PCApply 20 1.0 7.2790e-01 1.0 1.20e+08 1.1 1.3e+03 4.4e+03 2.0e+01 4 53 55 30 4 4 53 55 30 5 479 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. @@ -3046,9 +3082,9 @@ Discrete System 4 4 Weak Form 4 4 ======================================================================================================================== -Average time to get PetscTime(): 4.58e-08 -Average time for MPI_Barrier(): 1.5792e-06 -Average time for zero size MPI_Send(): 8.47333e-07 +Average time to get PetscTime(): 4.704e-07 +Average time for MPI_Barrier(): 5.7584e-06 +Average time for zero size MPI_Send(): 2.746e-06 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type elasticity # (source: command line) @@ -3112,69 +3148,69 @@ Option left: name:--scaling_type value: strong source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line ==== poisson weak scaling (3 processes with ndofs=10000) ==== -[2026-01-30 21:19:01.998] [RANK: 0] [info] Using partitioner with 216000 cell data -[2026-01-30 21:19:02.000] [RANK: 0] [info] Compute partition of cells across ranks -[2026-01-30 21:19:02.000] [RANK: 0] [info] Building mesh dual graph -[2026-01-30 21:19:02.000] [RANK: 0] [info] Build local part of mesh dual graph (mixed) -[2026-01-30 21:19:02.043] [RANK: 0] [info] Build nonlocal part of mesh dual graph -[2026-01-30 21:19:02.043] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:02.044] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:02.044] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 -[2026-01-30 21:19:02.046] [RANK: 0] [info] Graph edges (local: 210000, non-local: 1800) -[2026-01-30 21:19:02.046] [RANK: 0] [info] Compute graph partition using PT-SCOTCH -[2026-01-30 21:19:15.371] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -[2026-01-30 21:19:15.372] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -[2026-01-30 21:19:15.378] [RANK: 0] [info] Extract basic topology: 212928->212928 -[2026-01-30 21:19:15.378] [RANK: 0] [info] Build local dual graph -[2026-01-30 21:19:15.378] [RANK: 0] [info] Build local part of mesh dual graph (mixed) -[2026-01-30 21:19:15.441] [RANK: 0] [info] GPS pseudo-diameter:(162) 49600-3126 -[2026-01-30 21:19:15.451] [RANK: 0] [info] Create topology (single cell type) -[2026-01-30 21:19:15.451] [RANK: 0] [info] Create topology (generalised) -[2026-01-30 21:19:15.457] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -[2026-01-30 21:19:15.457] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -[2026-01-30 21:19:15.474] [RANK: 0] [info] Compute ghost indices -[2026-01-30 21:19:15.474] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 -[2026-01-30 21:19:15.475] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 -[2026-01-30 21:19:15.479] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -[2026-01-30 21:19:15.479] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -[2026-01-30 21:19:15.492] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:15.494] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:15.494] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:15.494] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:15.500] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -[2026-01-30 21:19:15.500] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -[2026-01-30 21:19:15.500] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 -[2026-01-30 21:19:15.501] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:15.501] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:15.501] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 -[2026-01-30 21:19:15.502] [RANK: 0] [info] Checking required entities per dimension -[2026-01-30 21:19:15.502] [RANK: 0] [info] Cell type: 0 dofmap: 53232x4 -[2026-01-30 21:19:15.506] [RANK: 0] [info] Global index computation -[2026-01-30 21:19:15.506] [RANK: 0] [info] Got 1 index_maps -[2026-01-30 21:19:15.507] [RANK: 0] [info] Get global indices -[2026-01-30 21:19:15.507] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:15.507] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:17.876] [RANK: 0] [info] Using partitioner with 216000 cell data +[2024-12-29 17:08:17.889] [RANK: 0] [info] Compute partition of cells across ranks +[2024-12-29 17:08:17.889] [RANK: 0] [info] Building mesh dual graph +[2024-12-29 17:08:17.889] [RANK: 0] [info] Build local part of mesh dual graph (mixed) +[2024-12-29 17:08:18.050] [RANK: 0] [info] Build nonlocal part of mesh dual graph +[2024-12-29 17:08:18.055] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:18.056] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:18.056] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 +[2024-12-29 17:08:18.062] [RANK: 0] [info] Graph edges (local: 210000, non-local: 1800) +[2024-12-29 17:08:18.062] [RANK: 0] [info] Compute graph partition using PT-SCOTCH +[2024-12-29 17:08:35.656] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +[2024-12-29 17:08:35.680] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +[2024-12-29 17:08:35.802] [RANK: 0] [info] Extract basic topology: 212772->212772 +[2024-12-29 17:08:35.802] [RANK: 0] [info] Build local dual graph +[2024-12-29 17:08:35.802] [RANK: 0] [info] Build local part of mesh dual graph (mixed) +[2024-12-29 17:08:36.156] [RANK: 0] [info] GPS pseudo-diameter:(165) 780-52060 +[2024-12-29 17:08:36.228] [RANK: 0] [info] Create topology (single cell type) +[2024-12-29 17:08:36.229] [RANK: 0] [info] Create topology (generalised) +[2024-12-29 17:08:36.300] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +[2024-12-29 17:08:36.324] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +[2024-12-29 17:08:36.495] [RANK: 0] [info] Compute ghost indices +[2024-12-29 17:08:36.495] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 +[2024-12-29 17:08:36.516] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 +[2024-12-29 17:08:36.606] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +[2024-12-29 17:08:36.624] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +[2024-12-29 17:08:36.864] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:36.892] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:36.924] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:36.956] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:37.036] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +[2024-12-29 17:08:37.052] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +[2024-12-29 17:08:37.052] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 +[2024-12-29 17:08:37.084] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:37.116] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:37.116] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 +[2024-12-29 17:08:37.228] [RANK: 0] [info] Checking required entities per dimension +[2024-12-29 17:08:37.229] [RANK: 0] [info] Cell type: 0 dofmap: 53193x4 +[2024-12-29 17:08:37.248] [RANK: 0] [info] Global index computation +[2024-12-29 17:08:37.249] [RANK: 0] [info] Got 1 index_maps +[2024-12-29 17:08:37.250] [RANK: 0] [info] Get global indices +[2024-12-29 17:08:37.344] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:37.360] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times -[2026-01-30 21:19:15.510] [RANK: 0] [info] Computing mesh entities of dimension 2 -[2026-01-30 21:19:15.550] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:15.550] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:15.643] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:15.643] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:15.645] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) -[2026-01-30 21:19:15.645] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. -[2026-01-30 21:19:15.646] [RANK: 0] [info] Checking required entities per dimension -[2026-01-30 21:19:15.646] [RANK: 0] [info] Cell type: 0 dofmap: 53232x4 -[2026-01-30 21:19:15.651] [RANK: 0] [info] Global index computation -[2026-01-30 21:19:15.651] [RANK: 0] [info] Got 1 index_maps -[2026-01-30 21:19:15.652] [RANK: 0] [info] Get global indices -[2026-01-30 21:19:15.652] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:15.652] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:15.652] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) -[2026-01-30 21:19:15.653] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) -[2026-01-30 21:19:15.653] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) -[2026-01-30 21:19:15.671] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) -[2026-01-30 21:19:15.671] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) -[2026-01-30 21:19:15.691] [RANK: 0] [info] Column ghost size increased from 464 to 1246 +[2024-12-29 17:08:37.416] [RANK: 0] [info] Computing mesh entities of dimension 2 +[2024-12-29 17:08:37.627] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:37.640] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:37.904] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:37.915] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:37.943] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) +[2024-12-29 17:08:37.944] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. +[2024-12-29 17:08:37.956] [RANK: 0] [info] Checking required entities per dimension +[2024-12-29 17:08:37.956] [RANK: 0] [info] Cell type: 0 dofmap: 53193x4 +[2024-12-29 17:08:37.974] [RANK: 0] [info] Global index computation +[2024-12-29 17:08:37.974] [RANK: 0] [info] Got 1 index_maps +[2024-12-29 17:08:37.975] [RANK: 0] [info] Get global indices +[2024-12-29 17:08:37.984] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:37.984] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:37.987] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) +[2024-12-29 17:08:38.003] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) +[2024-12-29 17:08:38.003] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) +[2024-12-29 17:08:38.122] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) +[2024-12-29 17:08:38.122] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) +[2024-12-29 17:08:38.278] [RANK: 0] [info] Column ghost size increased from 447 to 1221 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.9.0 @@ -3188,7 +3224,7 @@ Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- -[2026-01-30 21:19:15.740] [RANK: 0] [info] PETSc Krylov solver starting to solve system. +[2024-12-29 17:08:38.601] [RANK: 0] [info] PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero @@ -3234,41 +3270,41 @@ [MPI_MAX] Summary of timings | reps wall avg wall tot --------------------------------------------------------------------------------------------------------- -Build BoxMesh (tetrahedra) | 1 13.510000 13.510000 -Build dofmap data | 2 0.005000 0.010000 -Build sparsity | 1 0.010000 0.010000 -Compute connectivity 2-0 | 1 0.000000 0.000000 -Compute dof reordering map | 2 0.005000 0.010000 -Compute entities of dim = 2 | 1 0.140000 0.140000 -Compute graph partition (SCOTCH) | 1 13.320000 13.320000 -Compute local part of mesh dual graph (mixed) | 2 0.050000 0.100000 -Compute local-to-local map | 1 0.000000 0.000000 -Compute non-local part of mesh dual graph | 1 0.000000 0.000000 +Build BoxMesh (tetrahedra) | 1 19.560000 19.560000 +Build dofmap data | 2 0.110000 0.220000 +Build sparsity | 1 0.090000 0.090000 +Compute connectivity 2-0 | 1 0.010000 0.010000 +Compute dof reordering map | 2 0.000000 0.000000 +Compute entities of dim = 2 | 1 0.520000 0.520000 +Compute graph partition (SCOTCH) | 1 17.570000 17.570000 +Compute local part of mesh dual graph (mixed) | 2 0.245000 0.490000 +Compute local-to-local map | 1 0.010000 0.010000 +Compute non-local part of mesh dual graph | 1 0.060000 0.060000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 -Distribute fixed-degree adjacency list to destination ranks | 1 0.030000 0.030000 -Distribute row-wise data (scalable) | 1 0.000000 0.000000 -GPS: create_level_structure | 5 0.005000 0.010000 -Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 -Init MPI | 1 0.030000 0.030000 -Init PETSc | 1 0.000000 0.000000 -Init dofmap from element dofmap | 2 0.000000 0.000000 +Distribute fixed-degree adjacency list to destination ranks | 1 0.170000 0.170000 +Distribute row-wise data (scalable) | 1 0.200000 0.200000 +GPS: create_level_structure | 2 0.006667 0.040000 +Gibbs-Poole-Stockmeyer ordering | 1 0.100000 0.100000 +Init MPI | 1 0.410000 0.410000 +Init PETSc | 1 0.020000 0.020000 +Init dofmap from element dofmap | 2 0.015000 0.030000 Init logging | 1 0.000000 0.000000 -PETSc Krylov solver | 1 0.190000 0.190000 +PETSc Krylov solver | 1 0.940000 0.940000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 -SCOTCH: call SCOTCH_dgraphPart | 1 13.320000 13.320000 -SparsityPattern::finalize | 1 0.020000 0.020000 -Topology: create | 1 0.070000 0.070000 -Topology: determine shared index ownership | 1 0.020000 0.020000 -Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 -ZZZ Assemble | 1 0.080000 0.080000 -ZZZ Assemble matrix | 1 0.040000 0.040000 -ZZZ Assemble vector | 1 0.000000 0.000000 -ZZZ Create Mesh | 1 13.510000 13.510000 -ZZZ Create RHS function | 1 0.020000 0.020000 -ZZZ Create boundary conditions | 1 0.000000 0.000000 -ZZZ Create facets and facet->cell connectivity | 1 0.140000 0.140000 -ZZZ FunctionSpace | 1 0.010000 0.010000 -ZZZ Solve | 1 0.200000 0.200000 +SCOTCH: call SCOTCH_dgraphPart | 1 17.570000 17.570000 +SparsityPattern::finalize | 1 0.080000 0.080000 +Topology: create | 1 0.770000 0.770000 +Topology: determine shared index ownership | 1 0.180000 0.180000 +Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.040000 0.040000 +ZZZ Assemble | 1 0.610000 0.610000 +ZZZ Assemble matrix | 1 0.270000 0.270000 +ZZZ Assemble vector | 1 0.030000 0.030000 +ZZZ Create Mesh | 1 19.560000 19.560000 +ZZZ Create RHS function | 1 0.140000 0.140000 +ZZZ Create boundary conditions | 1 0.030000 0.030000 +ZZZ Create facets and facet->cell connectivity | 1 0.530000 0.530000 +ZZZ FunctionSpace | 1 0.060000 0.060000 +ZZZ Solve | 1 0.940000 0.940000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** @@ -3277,16 +3313,16 @@ ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ -/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named ionos5-amd64 with 3 processes, by pbuilder1 on Fri Jan 30 21:19:15 2026 +/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processes, by pbuilder2 on Sun Dec 29 17:08:39 2024 Using Petsc Release Version 3.22.2, Nov 28, 2024 Max Max/Min Avg Total -Time (sec): 1.394e+01 1.000 1.394e+01 +Time (sec): 2.168e+01 1.000 2.168e+01 Objects: 0.000e+00 0.000 0.000e+00 -Flops: 3.531e+06 1.024 3.489e+06 1.047e+07 -Flops/sec: 2.533e+05 1.024 2.502e+05 7.507e+05 +Flops: 3.545e+06 1.028 3.490e+06 1.047e+07 +Flops/sec: 1.635e+05 1.028 1.609e+05 4.828e+05 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 -MPI Msg Len (bytes): 1.912e+05 1.230 5.841e+03 5.257e+05 +MPI Msg Len (bytes): 1.791e+05 1.180 5.664e+03 5.098e+05 MPI Reductions: 7.200e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) @@ -3295,7 +3331,7 @@ Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total - 0: Main Stage: 1.3943e+01 100.0% 1.0467e+07 100.0% 9.000e+01 100.0% 5.841e+03 100.0% 5.400e+01 75.0% + 0: Main Stage: 2.1685e+01 100.0% 1.0469e+07 100.0% 9.000e+01 100.0% 5.664e+03 100.0% 5.400e+01 75.0% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. @@ -3319,32 +3355,32 @@ --- Event Stage 0: Main Stage -BuildTwoSided 5 1.0 3.2057e-03 50.9 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 9 0 -BuildTwoSidedF 2 1.0 3.1872e-03 64.2 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 -MatMult 7 1.0 1.6586e-03 1.0 1.93e+06 1.0 4.2e+01 5.6e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 3455 -MatConvert 1 1.0 3.7396e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 -MatAssemblyBegin 5 1.0 4.4602e-03 3.0 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 -MatAssemblyEnd 5 1.0 3.0277e-03 1.1 3.66e+03 1.2 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 9 3 -MatGetRowIJ 4 1.0 1.1790e-06 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatView 1 1.0 3.4898e-04 2.8 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 -MatSetPreallCOO 2 1.0 1.2307e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatSetValuesCOO 2 1.0 6.9668e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecTDot 16 1.0 2.6010e-04 1.2 3.21e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 22 0 9 0 0 30 3665 -VecNorm 8 1.0 1.7460e-04 1.2 1.61e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 2730 -VecCopy 2 1.0 3.8153e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecSet 9 1.0 5.1743e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecAXPY 14 1.0 1.1536e-04 1.2 2.81e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 7231 -VecAYPX 6 1.0 5.6172e-05 1.2 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 6364 -VecScatterBegin 7 1.0 9.5898e-05 1.2 0.00e+00 0.0 4.2e+01 5.6e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 -VecScatterEnd 7 1.0 5.0060e-04 4.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetGraph 3 1.0 3.1914e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetUp 3 1.0 1.2459e-04 1.1 0.00e+00 0.0 3.6e+01 8.1e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 -SFPack 7 1.0 2.5864e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFUnpack 7 1.0 1.5900e-06 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSetUp 1 1.0 4.8149e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSolve 1 1.0 5.8663e-02 1.0 2.82e+06 1.0 4.2e+01 5.6e+03 2.4e+01 0 80 47 45 33 0 80 47 45 44 142 -PCSetUp 1 1.0 1.3798e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 1 0 0 0 3 1 0 0 0 4 0 -PCApply 8 1.0 5.6296e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +BuildTwoSided 5 1.0 1.4092e-01 486.0 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 9 0 +BuildTwoSidedF 2 1.0 1.4087e-01 596.1 0.00e+00 0.0 1.2e+01 2.1e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 +MatMult 7 1.0 1.2213e-02 1.0 1.94e+06 1.0 4.2e+01 5.4e+03 0.0e+00 0 55 47 44 0 0 55 47 44 0 469 +MatConvert 1 1.0 2.2111e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 +MatAssemblyBegin 5 1.0 1.4379e-01 42.0 0.00e+00 0.0 1.2e+01 2.1e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 +MatAssemblyEnd 5 1.0 2.5163e-02 1.3 3.58e+03 1.2 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 9 0 +MatGetRowIJ 4 1.0 9.3160e-06 2.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatView 1 1.0 6.8292e-04 7.1 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 +MatSetPreallCOO 2 1.0 7.6284e-03 1.9 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatSetValuesCOO 2 1.0 3.0145e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecTDot 16 1.0 8.7061e-04 1.3 3.22e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 22 0 9 0 0 30 1095 +VecNorm 8 1.0 9.6376e-03 8.1 1.61e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 49 +VecCopy 2 1.0 1.2200e-04 2.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecSet 9 1.0 1.6420e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecAXPY 14 1.0 5.6438e-04 1.2 2.82e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 1478 +VecAYPX 6 1.0 3.0011e-04 1.6 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 1191 +VecScatterBegin 7 1.0 3.5453e-04 1.3 0.00e+00 0.0 4.2e+01 5.4e+03 0.0e+00 0 0 47 44 0 0 0 47 44 0 0 +VecScatterEnd 7 1.0 4.5729e-03 4.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetGraph 3 1.0 8.3790e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetUp 3 1.0 3.5798e-04 1.1 0.00e+00 0.0 3.6e+01 7.9e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 +SFPack 7 1.0 9.0969e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFUnpack 7 1.0 6.2160e-05 5.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSetUp 1 1.0 2.0865e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSolve 1 1.0 3.6435e-01 1.0 2.83e+06 1.0 4.2e+01 5.4e+03 2.4e+01 2 80 47 44 33 2 80 47 44 44 23 +PCSetUp 1 1.0 5.7368e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 3 0 0 0 3 3 0 0 0 4 0 +PCApply 8 1.0 3.4867e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 2 0 0 0 0 2 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. @@ -3361,9 +3397,9 @@ Preconditioner 1 1 Viewer 1 1 ======================================================================================================================== -Average time to get PetscTime(): 4.78e-08 -Average time for MPI_Barrier(): 2.253e-06 -Average time for zero size MPI_Send(): 2.79433e-06 +Average time to get PetscTime(): 4.927e-07 +Average time for MPI_Barrier(): 7.0154e-06 +Average time for zero size MPI_Send(): 7.608e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type poisson # (source: command line) @@ -3420,69 +3456,69 @@ Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: weak source: command line ==== poisson strong scaling (3 processes with ndofs=30000) ==== -[2026-01-30 21:19:16.362] [RANK: 0] [info] Using partitioner with 216000 cell data -[2026-01-30 21:19:16.365] [RANK: 0] [info] Compute partition of cells across ranks -[2026-01-30 21:19:16.365] [RANK: 0] [info] Building mesh dual graph -[2026-01-30 21:19:16.365] [RANK: 0] [info] Build local part of mesh dual graph (mixed) -[2026-01-30 21:19:16.430] [RANK: 0] [info] Build nonlocal part of mesh dual graph -[2026-01-30 21:19:16.431] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:16.431] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:16.431] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 -[2026-01-30 21:19:16.434] [RANK: 0] [info] Graph edges (local: 210000, non-local: 1800) -[2026-01-30 21:19:16.434] [RANK: 0] [info] Compute graph partition using PT-SCOTCH -[2026-01-30 21:19:29.759] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -[2026-01-30 21:19:29.760] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -[2026-01-30 21:19:29.767] [RANK: 0] [info] Extract basic topology: 213000->213000 -[2026-01-30 21:19:29.767] [RANK: 0] [info] Build local dual graph -[2026-01-30 21:19:29.767] [RANK: 0] [info] Build local part of mesh dual graph (mixed) -[2026-01-30 21:19:29.827] [RANK: 0] [info] GPS pseudo-diameter:(159) 49561-2164 -[2026-01-30 21:19:29.837] [RANK: 0] [info] Create topology (single cell type) -[2026-01-30 21:19:29.837] [RANK: 0] [info] Create topology (generalised) -[2026-01-30 21:19:29.845] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -[2026-01-30 21:19:29.845] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -[2026-01-30 21:19:29.858] [RANK: 0] [info] Compute ghost indices -[2026-01-30 21:19:29.858] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 -[2026-01-30 21:19:29.859] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 -[2026-01-30 21:19:29.862] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -[2026-01-30 21:19:29.862] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -[2026-01-30 21:19:29.876] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:29.876] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:29.876] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:29.876] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:29.882] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -[2026-01-30 21:19:29.882] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -[2026-01-30 21:19:29.882] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 -[2026-01-30 21:19:29.883] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:29.883] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:29.883] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 -[2026-01-30 21:19:29.883] [RANK: 0] [info] Checking required entities per dimension -[2026-01-30 21:19:29.883] [RANK: 0] [info] Cell type: 0 dofmap: 53250x4 -[2026-01-30 21:19:29.888] [RANK: 0] [info] Global index computation -[2026-01-30 21:19:29.888] [RANK: 0] [info] Got 1 index_maps -[2026-01-30 21:19:29.888] [RANK: 0] [info] Get global indices -[2026-01-30 21:19:29.889] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:29.889] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:40.973] [RANK: 0] [info] Using partitioner with 216000 cell data +[2024-12-29 17:08:40.981] [RANK: 0] [info] Compute partition of cells across ranks +[2024-12-29 17:08:40.981] [RANK: 0] [info] Building mesh dual graph +[2024-12-29 17:08:40.981] [RANK: 0] [info] Build local part of mesh dual graph (mixed) +[2024-12-29 17:08:41.077] [RANK: 0] [info] Build nonlocal part of mesh dual graph +[2024-12-29 17:08:41.181] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:08:41.182] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:08:41.182] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 +[2024-12-29 17:08:41.189] [RANK: 0] [info] Graph edges (local: 210000, non-local: 1800) +[2024-12-29 17:08:41.189] [RANK: 0] [info] Compute graph partition using PT-SCOTCH +[2024-12-29 17:09:00.255] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +[2024-12-29 17:09:00.276] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +[2024-12-29 17:09:00.339] [RANK: 0] [info] Extract basic topology: 212780->212780 +[2024-12-29 17:09:00.339] [RANK: 0] [info] Build local dual graph +[2024-12-29 17:09:00.339] [RANK: 0] [info] Build local part of mesh dual graph (mixed) +[2024-12-29 17:09:00.459] [RANK: 0] [info] GPS pseudo-diameter:(173) 51645-1812 +[2024-12-29 17:09:00.476] [RANK: 0] [info] Create topology (single cell type) +[2024-12-29 17:09:00.476] [RANK: 0] [info] Create topology (generalised) +[2024-12-29 17:09:00.526] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +[2024-12-29 17:09:00.529] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +[2024-12-29 17:09:00.549] [RANK: 0] [info] Compute ghost indices +[2024-12-29 17:09:00.549] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 +[2024-12-29 17:09:00.568] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 +[2024-12-29 17:09:00.580] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +[2024-12-29 17:09:00.580] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +[2024-12-29 17:09:00.605] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:09:00.612] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:09:00.612] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:09:00.612] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:09:00.625] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +[2024-12-29 17:09:00.625] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +[2024-12-29 17:09:00.625] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 +[2024-12-29 17:09:00.626] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:09:00.626] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:09:00.626] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 +[2024-12-29 17:09:00.627] [RANK: 0] [info] Checking required entities per dimension +[2024-12-29 17:09:00.628] [RANK: 0] [info] Cell type: 0 dofmap: 53195x4 +[2024-12-29 17:09:00.638] [RANK: 0] [info] Global index computation +[2024-12-29 17:09:00.638] [RANK: 0] [info] Got 1 index_maps +[2024-12-29 17:09:00.639] [RANK: 0] [info] Get global indices +[2024-12-29 17:09:00.641] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:09:00.641] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times -[2026-01-30 21:19:29.891] [RANK: 0] [info] Computing mesh entities of dimension 2 -[2026-01-30 21:19:29.931] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:29.933] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:30.022] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:30.022] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:30.024] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) -[2026-01-30 21:19:30.024] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. -[2026-01-30 21:19:30.025] [RANK: 0] [info] Checking required entities per dimension -[2026-01-30 21:19:30.025] [RANK: 0] [info] Cell type: 0 dofmap: 53250x4 -[2026-01-30 21:19:30.030] [RANK: 0] [info] Global index computation -[2026-01-30 21:19:30.030] [RANK: 0] [info] Got 1 index_maps -[2026-01-30 21:19:30.031] [RANK: 0] [info] Get global indices -[2026-01-30 21:19:30.031] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -[2026-01-30 21:19:30.031] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -[2026-01-30 21:19:30.031] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) -[2026-01-30 21:19:30.032] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) -[2026-01-30 21:19:30.032] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) -[2026-01-30 21:19:30.050] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) -[2026-01-30 21:19:30.050] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) -[2026-01-30 21:19:30.071] [RANK: 0] [info] Column ghost size increased from 478 to 1282 +[2024-12-29 17:09:00.647] [RANK: 0] [info] Computing mesh entities of dimension 2 +[2024-12-29 17:09:00.730] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:09:00.760] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:09:00.979] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:09:00.988] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:09:00.997] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) +[2024-12-29 17:09:00.997] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. +[2024-12-29 17:09:01.001] [RANK: 0] [info] Checking required entities per dimension +[2024-12-29 17:09:01.002] [RANK: 0] [info] Cell type: 0 dofmap: 53195x4 +[2024-12-29 17:09:01.018] [RANK: 0] [info] Global index computation +[2024-12-29 17:09:01.018] [RANK: 0] [info] Got 1 index_maps +[2024-12-29 17:09:01.019] [RANK: 0] [info] Get global indices +[2024-12-29 17:09:01.047] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +[2024-12-29 17:09:01.047] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +[2024-12-29 17:09:01.053] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) +[2024-12-29 17:09:01.054] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) +[2024-12-29 17:09:01.054] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) +[2024-12-29 17:09:01.139] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) +[2024-12-29 17:09:01.139] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) +[2024-12-29 17:09:01.273] [RANK: 0] [info] Column ghost size increased from 475 to 1284 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.9.0 @@ -3496,7 +3532,7 @@ Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- -[2026-01-30 21:19:30.120] [RANK: 0] [info] PETSc Krylov solver starting to solve system. +[2024-12-29 17:09:01.519] [RANK: 0] [info] PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero @@ -3542,41 +3578,41 @@ [MPI_MAX] Summary of timings | reps wall avg wall tot --------------------------------------------------------------------------------------------------------- -Build BoxMesh (tetrahedra) | 1 13.540000 13.540000 -Build dofmap data | 2 0.005000 0.010000 -Build sparsity | 1 0.000000 0.000000 -Compute connectivity 2-0 | 1 0.000000 0.000000 +Build BoxMesh (tetrahedra) | 1 19.670000 19.670000 +Build dofmap data | 2 0.035000 0.070000 +Build sparsity | 1 0.100000 0.100000 +Compute connectivity 2-0 | 1 0.020000 0.020000 Compute dof reordering map | 2 0.000000 0.000000 -Compute entities of dim = 2 | 1 0.130000 0.130000 -Compute graph partition (SCOTCH) | 1 13.320000 13.320000 -Compute local part of mesh dual graph (mixed) | 2 0.060000 0.120000 +Compute entities of dim = 2 | 1 0.370000 0.370000 +Compute graph partition (SCOTCH) | 1 19.060000 19.060000 +Compute local part of mesh dual graph (mixed) | 2 0.140000 0.280000 Compute local-to-local map | 1 0.000000 0.000000 -Compute non-local part of mesh dual graph | 1 0.010000 0.010000 +Compute non-local part of mesh dual graph | 1 0.110000 0.110000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 -Distribute fixed-degree adjacency list to destination ranks | 1 0.030000 0.030000 +Distribute fixed-degree adjacency list to destination ranks | 1 0.100000 0.100000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 -GPS: create_level_structure | 2 0.001667 0.010000 -Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 -Init MPI | 1 0.030000 0.030000 -Init PETSc | 1 0.000000 0.000000 -Init dofmap from element dofmap | 2 0.000000 0.000000 +GPS: create_level_structure | 2 0.005000 0.010000 +Gibbs-Poole-Stockmeyer ordering | 1 0.020000 0.020000 +Init MPI | 1 0.490000 0.490000 +Init PETSc | 1 0.020000 0.020000 +Init dofmap from element dofmap | 2 0.020000 0.040000 Init logging | 1 0.000000 0.000000 -PETSc Krylov solver | 1 0.210000 0.210000 -SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 -SCOTCH: call SCOTCH_dgraphPart | 1 13.320000 13.320000 -SparsityPattern::finalize | 1 0.020000 0.020000 -Topology: create | 1 0.060000 0.060000 -Topology: determine shared index ownership | 1 0.020000 0.020000 -Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 -ZZZ Assemble | 1 0.080000 0.080000 -ZZZ Assemble matrix | 1 0.040000 0.040000 -ZZZ Assemble vector | 1 0.000000 0.000000 -ZZZ Create Mesh | 1 13.540000 13.540000 -ZZZ Create RHS function | 1 0.020000 0.020000 -ZZZ Create boundary conditions | 1 0.000000 0.000000 -ZZZ Create facets and facet->cell connectivity | 1 0.130000 0.130000 -ZZZ FunctionSpace | 1 0.010000 0.010000 -ZZZ Solve | 1 0.220000 0.220000 +PETSc Krylov solver | 1 1.530000 1.530000 +SCOTCH: call SCOTCH_dgraphBuild | 1 0.010000 0.010000 +SCOTCH: call SCOTCH_dgraphPart | 1 19.050000 19.050000 +SparsityPattern::finalize | 1 0.050000 0.050000 +Topology: create | 1 0.160000 0.160000 +Topology: determine shared index ownership | 1 0.070000 0.070000 +Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.020000 0.020000 +ZZZ Assemble | 1 0.460000 0.460000 +ZZZ Assemble matrix | 1 0.180000 0.180000 +ZZZ Assemble vector | 1 0.040000 0.040000 +ZZZ Create Mesh | 1 19.670000 19.670000 +ZZZ Create RHS function | 1 0.160000 0.160000 +ZZZ Create boundary conditions | 1 0.010000 0.010000 +ZZZ Create facets and facet->cell connectivity | 1 0.380000 0.380000 +ZZZ FunctionSpace | 1 0.050000 0.050000 +ZZZ Solve | 1 1.540000 1.540000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** @@ -3585,16 +3621,16 @@ ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ -/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named ionos5-amd64 with 3 processes, by pbuilder1 on Fri Jan 30 21:19:30 2026 +/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processes, by pbuilder2 on Sun Dec 29 17:09:03 2024 Using Petsc Release Version 3.22.2, Nov 28, 2024 Max Max/Min Avg Total -Time (sec): 1.397e+01 1.000 1.397e+01 +Time (sec): 2.209e+01 1.000 2.209e+01 Objects: 0.000e+00 0.000 0.000e+00 -Flops: 3.567e+06 1.035 3.489e+06 1.047e+07 -Flops/sec: 2.552e+05 1.035 2.497e+05 7.490e+05 +Flops: 3.543e+06 1.028 3.488e+06 1.046e+07 +Flops/sec: 1.604e+05 1.028 1.579e+05 4.737e+05 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 -MPI Msg Len (bytes): 1.823e+05 1.121 5.854e+03 5.268e+05 +MPI Msg Len (bytes): 1.986e+05 1.245 6.102e+03 5.492e+05 MPI Reductions: 7.200e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) @@ -3603,7 +3639,7 @@ Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total - 0: Main Stage: 1.3975e+01 100.0% 1.0467e+07 100.0% 9.000e+01 100.0% 5.854e+03 100.0% 5.400e+01 75.0% + 0: Main Stage: 2.2087e+01 100.0% 1.0464e+07 100.0% 9.000e+01 100.0% 6.102e+03 100.0% 5.400e+01 75.0% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. @@ -3627,32 +3663,32 @@ --- Event Stage 0: Main Stage -BuildTwoSided 5 1.0 2.5300e-03 25.2 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 9 0 -BuildTwoSidedF 2 1.0 2.5316e-03 30.0 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 -MatMult 7 1.0 2.0590e-03 1.0 1.95e+06 1.0 4.2e+01 5.6e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 2783 -MatConvert 1 1.0 3.7296e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 -MatAssemblyBegin 5 1.0 4.1229e-03 2.8 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 -MatAssemblyEnd 5 1.0 2.9832e-03 1.1 3.68e+03 1.1 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 9 4 -MatGetRowIJ 4 1.0 1.2470e-06 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatView 1 1.0 4.3337e-04 3.2 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 -MatSetPreallCOO 2 1.0 1.0205e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatSetValuesCOO 2 1.0 6.8081e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecTDot 16 1.0 2.5547e-04 1.2 3.25e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 22 0 9 0 0 30 3731 -VecNorm 8 1.0 4.2432e-04 2.4 1.62e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 1123 -VecCopy 2 1.0 3.5943e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecSet 9 1.0 5.2718e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecAXPY 14 1.0 1.3210e-04 1.1 2.84e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 6315 -VecAYPX 6 1.0 1.1042e-04 1.1 1.22e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 3237 -VecScatterBegin 7 1.0 1.3155e-04 1.3 0.00e+00 0.0 4.2e+01 5.6e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 -VecScatterEnd 7 1.0 1.8552e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetGraph 3 1.0 3.0780e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetUp 3 1.0 1.2162e-04 1.0 0.00e+00 0.0 3.6e+01 8.1e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 -SFPack 7 1.0 3.2803e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFUnpack 7 1.0 1.8260e-06 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSetUp 1 1.0 7.5214e-05 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSolve 1 1.0 6.6089e-02 1.0 2.85e+06 1.0 4.2e+01 5.6e+03 2.4e+01 0 80 47 45 33 0 80 47 45 44 126 -PCSetUp 1 1.0 1.4499e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 1 0 0 0 3 1 0 0 0 4 0 -PCApply 8 1.0 6.3184e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +BuildTwoSided 5 1.0 6.3828e-02 14.2 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 9 0 +BuildTwoSidedF 2 1.0 6.0629e-02 13.5 0.00e+00 0.0 1.2e+01 2.3e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 +MatMult 7 1.0 2.3454e-02 1.2 1.94e+06 1.0 4.2e+01 5.8e+03 0.0e+00 0 55 47 44 0 0 55 47 44 0 244 +MatConvert 1 1.0 3.6611e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 +MatAssemblyBegin 5 1.0 6.3650e-02 8.4 0.00e+00 0.0 1.2e+01 2.3e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 +MatAssemblyEnd 5 1.0 3.7980e-02 1.4 3.94e+03 1.3 1.2e+01 1.5e+03 5.0e+00 0 0 13 3 7 0 0 13 3 9 0 +MatGetRowIJ 4 1.0 1.2355e-05 32.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatView 1 1.0 1.1989e-02 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 +MatSetPreallCOO 2 1.0 1.1608e-02 3.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatSetValuesCOO 2 1.0 3.8155e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecTDot 16 1.0 1.4090e-02 5.8 3.22e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 22 0 9 0 0 30 68 +VecNorm 8 1.0 1.3028e-02 1.6 1.61e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 37 +VecCopy 2 1.0 1.7978e-04 2.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecSet 9 1.0 2.0658e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecAXPY 14 1.0 5.6305e-03 10.6 2.82e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 148 +VecAYPX 6 1.0 5.7901e-04 2.4 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 617 +VecScatterBegin 7 1.0 4.0051e-04 1.2 0.00e+00 0.0 4.2e+01 5.8e+03 0.0e+00 0 0 47 44 0 0 0 47 44 0 0 +VecScatterEnd 7 1.0 1.2577e-02 2.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetGraph 3 1.0 9.2574e-05 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetUp 3 1.0 3.5084e-03 1.0 0.00e+00 0.0 3.6e+01 8.5e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 +SFPack 7 1.0 1.1087e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFUnpack 7 1.0 1.6754e-05 1.9 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSetUp 1 1.0 1.8786e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSolve 1 1.0 8.2751e-01 1.0 2.83e+06 1.0 4.2e+01 5.8e+03 2.4e+01 4 80 47 44 33 4 80 47 44 44 10 +PCSetUp 1 1.0 6.8880e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 3 0 0 0 3 3 0 0 0 4 0 +PCApply 8 1.0 7.8184e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 4 0 0 0 0 4 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. @@ -3669,9 +3705,9 @@ Preconditioner 1 1 Viewer 1 1 ======================================================================================================================== -Average time to get PetscTime(): 4.91e-08 -Average time for MPI_Barrier(): 1.4548e-06 -Average time for zero size MPI_Send(): 2.22833e-06 +Average time to get PetscTime(): 8.507e-07 +Average time for MPI_Barrier(): 4.8544e-06 +Average time for zero size MPI_Send(): 1.2866e-05 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type poisson # (source: command line) @@ -3732,7 +3768,7 @@ dh_testroot -O--buildsystem=cmake -O--sourcedirectory=src dh_prep -O--buildsystem=cmake -O--sourcedirectory=src dh_auto_install -O--buildsystem=cmake -O--sourcedirectory=src - cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/fenicsx-performance-tests-0.9.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j20 install DESTDIR=/build/reproducible-path/fenicsx-performance-tests-0.9.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -3764,8 +3800,8 @@ dh_md5sums -O--buildsystem=cmake -O--sourcedirectory=src dh_builddeb -O--buildsystem=cmake -O--sourcedirectory=src dpkg-deb: building package 'fenicsx-performance-tests-dbgsym' in '../fenicsx-performance-tests-dbgsym_0.9.0-2_amd64.deb'. -dpkg-deb: building package 'fenicsx-performance-tests' in '../fenicsx-performance-tests_0.9.0-2_amd64.deb'. dpkg-deb: building package 'fenicsx-performance-tests-source' in '../fenicsx-performance-tests-source_0.9.0-2_all.deb'. +dpkg-deb: building package 'fenicsx-performance-tests' in '../fenicsx-performance-tests_0.9.0-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../fenicsx-performance-tests_0.9.0-2_amd64.buildinfo dpkg-genchanges --build=binary -O../fenicsx-performance-tests_0.9.0-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -3773,12 +3809,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/102524/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/102524/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/4192104 and its subdirectories -I: Current time: Fri Jan 30 21:19:40 -12 2026 -I: pbuilder-time-stamp: 1769851180 +I: removing directory /srv/workspace/pbuilder/102524 and its subdirectories +I: Current time: Sun Dec 29 17:09:43 +14 2024 +I: pbuilder-time-stamp: 1735441783