Diff of the two buildlogs: -- --- b1/build.log 2024-09-16 05:25:03.747740296 +0000 +++ b2/build.log 2024-09-16 05:27:53.888496976 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Sep 15 17:21:19 -12 2024 -I: pbuilder-time-stamp: 1726464079 +I: Current time: Mon Oct 20 01:48:06 +14 2025 +I: pbuilder-time-stamp: 1760874486 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -27,52 +27,84 @@ dpkg-source: info: applying enable_complex_build.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/190417/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3791/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Oct 19 11:48 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3791/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3791/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='64a7fd767911485fb66173084172a871' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='190417' - PS1='# ' - PS2='> ' + INVOCATION_ID=acf9eb19c7f94c79bedea46759560118 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3791 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IWqmdNxU/pbuilderrc_EzTg --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IWqmdNxU/b1 --logfile b1/build.log fenicsx-performance-tests_0.8.0-1.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IWqmdNxU/pbuilderrc_6aiq --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IWqmdNxU/b2 --logfile b2/build.log fenicsx-performance-tests_0.8.0-1.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.1.0-25-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.106-3 (2024-08-26) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.10.6+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.6-1~bpo12+1 (2024-08-26) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/190417/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3791/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -476,7 +508,7 @@ Get: 354 http://deb.debian.org/debian trixie/main amd64 python3-setuptools all 74.1.2-2 [736 kB] Get: 355 http://deb.debian.org/debian trixie/main amd64 python3-ffcx all 1:0.8.0-1 [100 kB] Get: 356 http://deb.debian.org/debian trixie/main amd64 libdolfinx-dev amd64 1:0.8.0-11 [208 kB] -Fetched 326 MB in 4s (79.1 MB/s) +Fetched 326 MB in 6s (52.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19737 files and directories currently installed.) @@ -1622,8 +1654,8 @@ Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon Sep 16 05:22:42 UTC 2024. -Universal Time is now: Mon Sep 16 05:22:42 UTC 2024. +Local time is now: Sun Oct 19 11:49:07 UTC 2025. +Universal Time is now: Sun Oct 19 11:49:07 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:amd64 (1.83.0-3.2) ... @@ -1971,7 +2003,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/fenicsx-performance-tests-0.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fenicsx-performance-tests_0.8.0-1_source.changes +I: user script /srv/workspace/pbuilder/3791/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/3791/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/fenicsx-performance-tests-0.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fenicsx-performance-tests_0.8.0-1_source.changes dpkg-buildpackage: info: source package fenicsx-performance-tests dpkg-buildpackage: info: source version 0.8.0-1 dpkg-buildpackage: info: source distribution unstable @@ -2063,7 +2099,7 @@ -- Adding boost_program_options dependencies: headers -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70") found components: program_options -- -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall --- Configuring done (7.0s) +-- Configuring done (4.1s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -2076,7 +2112,7 @@ -- Build files have been written to: /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' dh_auto_build -O--buildsystem=cmake -O--sourcedirectory=src - cd obj-x86_64-linux-gnu && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -2084,30 +2120,30 @@ make[2]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/depend make[3]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu' -[ 9%] Generating Elasticity.c -[ 18%] Generating Poisson.c -ffcx /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/Elasticity.py +[ 9%] Generating Poisson.c +[ 18%] Generating Elasticity.c ffcx /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/Poisson.py +ffcx /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/Elasticity.py cd /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenicsx-performance-tests-0.8.0/src /build/reproducible-path/fenicsx-performance-tests-0.8.0/src /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu/CMakeFiles/dolfinx-scaling-test.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/build make[3]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu' [ 27%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -[ 36%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -[ 45%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -[ 54%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -[ 63%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o +[ 36%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.20/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.20/x86_64-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/main.cpp -[ 72%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -/usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.20/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.20/x86_64-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mesh.cpp +[ 45%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o +[ 54%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o +[ 63%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.20/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.20/x86_64-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp -/usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.20/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.20/x86_64-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp -[ 90%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -[ 90%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -/usr/bin/cc -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC 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/usr/lib/petscdir/petsc3.20/x86_64-linux-gnu-real/lib/libpetsc_real.so @@ -2120,64 +2156,64 @@ make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' debian/tests/run-dolfinx-scaling-test -p /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu ==== elasticity weak scaling (3 processes with ndofs=10000) ==== -2024-09-15 17:23:53.554 ( 0.092s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks -2024-09-15 17:23:53.554 ( 0.092s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph -2024-09-15 17:23:53.554 ( 0.092s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-09-15 17:23:53.576 ( 0.115s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph -2024-09-15 17:23:53.577 ( 0.116s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:23:53.577 ( 0.116s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:23:53.577 ( 0.116s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 -2024-09-15 17:23:53.580 ( 0.118s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 66332, non-local: 962) -2024-09-15 17:23:53.580 ( 0.119s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH -2024-09-15 17:24:02.106 ( 8.645s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-09-15 17:24:02.107 ( 8.645s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-09-15 17:24:02.112 ( 8.651s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-09-15 17:24:02.136 ( 8.675s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(119) 16687-1092 -2024-09-15 17:24:02.140 ( 8.678s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) -2024-09-15 17:24:02.140 ( 8.678s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) -2024-09-15 17:24:02.142 ( 8.680s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-09-15 17:24:02.142 ( 8.680s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-09-15 17:24:02.146 ( 8.685s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices -2024-09-15 17:24:02.146 ( 8.685s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 -2024-09-15 17:24:02.147 ( 8.685s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 -2024-09-15 17:24:02.148 ( 8.687s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-09-15 17:24:02.148 ( 8.687s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-09-15 17:24:02.154 ( 8.692s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:02.154 ( 8.692s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:02.154 ( 8.692s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:02.154 ( 8.692s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:02.156 ( 8.694s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-09-15 17:24:02.156 ( 8.694s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-09-15 17:24:02.156 ( 8.694s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 -2024-09-15 17:24:02.156 ( 8.695s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:02.156 ( 8.695s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:02.156 ( 8.695s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 -2024-09-15 17:24:02.157 ( 8.695s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-09-15 17:24:02.157 ( 8.695s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17320x4 -2024-09-15 17:24:02.160 ( 8.698s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-09-15 17:24:02.160 ( 8.698s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-09-15 17:24:02.160 ( 8.699s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-09-15 17:24:02.160 ( 8.699s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:02.160 ( 8.699s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:49:49.228 ( 0.078s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks +2025-10-20 01:49:49.228 ( 0.078s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph +2025-10-20 01:49:49.228 ( 0.078s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2025-10-20 01:49:49.248 ( 0.098s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph +2025-10-20 01:49:49.248 ( 0.098s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:49:49.248 ( 0.099s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:49:49.248 ( 0.099s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 +2025-10-20 01:49:49.250 ( 0.100s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 66332, non-local: 962) +2025-10-20 01:49:49.250 ( 0.101s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH +2025-10-20 01:49:57.057 ( 7.907s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2025-10-20 01:49:57.057 ( 7.907s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2025-10-20 01:49:57.059 ( 7.909s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2025-10-20 01:49:57.078 ( 7.929s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(119) 16639-1193 +2025-10-20 01:49:57.081 ( 7.931s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) +2025-10-20 01:49:57.081 ( 7.931s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) +2025-10-20 01:49:57.083 ( 7.934s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2025-10-20 01:49:57.083 ( 7.934s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2025-10-20 01:49:57.088 ( 7.938s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices +2025-10-20 01:49:57.088 ( 7.938s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 +2025-10-20 01:49:57.088 ( 7.939s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 +2025-10-20 01:49:57.090 ( 7.940s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2025-10-20 01:49:57.090 ( 7.940s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2025-10-20 01:49:57.095 ( 7.945s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:49:57.096 ( 7.946s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:49:57.096 ( 7.946s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:49:57.096 ( 7.946s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:49:57.097 ( 7.947s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2025-10-20 01:49:57.097 ( 7.947s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2025-10-20 01:49:57.097 ( 7.947s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 +2025-10-20 01:49:57.097 ( 7.948s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:49:57.097 ( 7.948s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:49:57.098 ( 7.948s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 +2025-10-20 01:49:57.098 ( 7.948s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2025-10-20 01:49:57.098 ( 7.948s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17142x4 +2025-10-20 01:49:57.101 ( 7.951s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2025-10-20 01:49:57.101 ( 7.951s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2025-10-20 01:49:57.101 ( 7.951s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2025-10-20 01:49:57.101 ( 7.952s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:49:57.101 ( 7.952s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:49:57.103 ( 7.953s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 UnitCube (24x19x19) to be refined 0 times -2024-09-15 17:24:02.162 ( 8.700s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 -2024-09-15 17:24:02.172 ( 8.710s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:02.172 ( 8.710s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:02.223 ( 8.761s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:02.223 ( 8.761s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:02.225 ( 8.763s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) -2024-09-15 17:24:02.225 ( 8.763s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. -2024-09-15 17:24:02.226 ( 8.765s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-09-15 17:24:02.227 ( 8.765s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17320x4 -2024-09-15 17:24:02.229 ( 8.768s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-09-15 17:24:02.230 ( 8.768s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-09-15 17:24:02.230 ( 8.768s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-09-15 17:24:02.230 ( 8.769s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:02.230 ( 8.769s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:02.231 ( 8.770s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-09-15 17:24:02.232 ( 8.770s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-09-15 17:24:02.232 ( 8.770s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) -2024-09-15 17:24:02.263 ( 8.801s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 216 to 546 +2025-10-20 01:49:57.109 ( 7.959s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:49:57.109 ( 7.959s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:49:57.156 ( 8.007s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:49:57.156 ( 8.007s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:49:57.157 ( 8.007s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) +2025-10-20 01:49:57.157 ( 8.007s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. +2025-10-20 01:49:57.158 ( 8.008s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2025-10-20 01:49:57.158 ( 8.008s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17142x4 +2025-10-20 01:49:57.159 ( 8.010s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2025-10-20 01:49:57.160 ( 8.010s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2025-10-20 01:49:57.160 ( 8.010s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2025-10-20 01:49:57.160 ( 8.010s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:49:57.160 ( 8.010s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:49:57.160 ( 8.010s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2025-10-20 01:49:57.160 ( 8.011s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2025-10-20 01:49:57.160 ( 8.011s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) +2025-10-20 01:49:57.173 ( 8.023s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 207 to 542 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 @@ -2191,7 +2227,7 @@ Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- -2024-09-15 17:24:02.462 ( 9.001s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. +2025-10-20 01:49:57.260 ( 8.111s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero @@ -2211,7 +2247,7 @@ MIS-k aggressive coarsening MIS-2 coarsening on aggressive levels Number smoothing steps 1 - Complexity: grid = 1.071 operator = 1.27266 + Complexity: grid = 1.0688 operator = 1.26585 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly @@ -2236,34 +2272,34 @@ tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd - factor fill ratio given 5., needed 1.08487 + factor fill ratio given 5., needed 1.03817 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij - rows=198, cols=198, bs=6 + rows=222, cols=222, bs=6 package used to perform factorization: petsc - total: nonzeros=35892, allocated nonzeros=35892 - using I-node routines: found 51 nodes, limit used is 5 + total: nonzeros=45036, allocated nonzeros=45036 + using I-node routines: found 58 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij - rows=198, cols=198, bs=6 - total: nonzeros=33084, allocated nonzeros=33084 + rows=222, cols=222, bs=6 + total: nonzeros=43380, allocated nonzeros=43380 total number of mallocs used during MatSetValues calls=0 - using I-node routines: found 65 nodes, limit used is 5 + using I-node routines: found 71 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij - rows=198, cols=198, bs=6 - total: nonzeros=33084, allocated nonzeros=33084 + rows=222, cols=222, bs=6 + total: nonzeros=43380, allocated nonzeros=43380 total number of mallocs used during MatSetValues calls=0 - using I-node (on process 0) routines: found 65 nodes, limit used is 5 + using I-node (on process 0) routines: found 71 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind - eigenvalue targets used: min 0.261085, max 2.87193 - eigenvalues provided (min 1.44507e-06, max 2.61085) with transform: [0. 0.1; 0. 1.1] + eigenvalue targets used: min 0.331512, max 3.64663 + eigenvalues provided (min 2.48711e-06, max 3.31512) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning @@ -2274,18 +2310,18 @@ linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij - rows=1932, cols=1932, bs=6 - total: nonzeros=308160, allocated nonzeros=308160 + rows=1842, cols=1842, bs=6 + total: nonzeros=289332, allocated nonzeros=289332 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation - using I-node (on process 0) routines: found 216 nodes, limit used is 5 + using I-node (on process 0) routines: found 184 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind - eigenvalue targets used: min 0.258801, max 2.84681 - eigenvalues provided (min 0.0757824, max 2.58801) with transform: [0. 0.1; 0. 1.1] + eigenvalue targets used: min 0.258067, max 2.83874 + eigenvalues provided (min 0.0759236, max 2.58067) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning @@ -2300,7 +2336,7 @@ total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space - using I-node (on process 0) routines: found 3392 nodes, limit used is 5 + using I-node (on process 0) routines: found 3368 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes @@ -2309,47 +2345,47 @@ total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space - using I-node (on process 0) routines: found 3392 nodes, limit used is 5 + using I-node (on process 0) routines: found 3368 nodes, limit used is 5 [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- -Build BoxMesh (tetrahedra) | 1 8.610000 8.610000 -Build dofmap data | 2 0.000000 0.000000 +Build BoxMesh (tetrahedra) | 1 7.880000 7.880000 +Build dofmap data | 2 0.010000 0.020000 Build sparsity | 1 0.010000 0.010000 -Compute connectivity 2-0 | 1 0.010000 0.010000 +Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 -Compute entities of dim = 2 | 1 0.060000 0.060000 -Compute graph partition (SCOTCH) | 1 8.500000 8.500000 -Compute local part of mesh dual graph | 2 0.025000 0.050000 +Compute entities of dim = 2 | 1 0.050000 0.050000 +Compute graph partition (SCOTCH) | 1 7.800000 7.800000 +Compute local part of mesh dual graph | 2 0.015000 0.030000 Compute local-to-local map | 1 0.000000 0.000000 -Compute non-local part of mesh dual graph | 1 0.000000 0.000000 +Compute non-local part of mesh dual graph | 1 0.010000 0.010000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 -Distribute AdjacencyList nodes to destination ranks | 1 0.030000 0.030000 +Distribute AdjacencyList nodes to destination ranks | 1 0.010000 0.010000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 -GPS: create_level_structure | 2 0.000000 0.000000 +GPS: create_level_structure | 2 0.005000 0.010000 Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 -Init MPI | 1 0.140000 0.140000 +Init MPI | 1 0.070000 0.070000 Init PETSc | 1 0.000000 0.000000 -Init dofmap from element dofmap | 2 0.000000 0.000000 +Init dofmap from element dofmap | 2 0.010000 0.020000 Init logging | 1 0.000000 0.000000 -PETSc Krylov solver | 1 0.770000 0.770000 +PETSc Krylov solver | 1 0.380000 0.380000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 -SCOTCH: call SCOTCH_dgraphPart | 1 8.500000 8.500000 +SCOTCH: call SCOTCH_dgraphPart | 1 7.800000 7.800000 SparsityPattern::finalize | 1 0.000000 0.000000 Topology: create | 1 0.020000 0.020000 -Topology: determine shared index ownership | 1 0.000000 0.000000 +Topology: determine shared index ownership | 1 0.010000 0.010000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.000000 0.000000 -ZZZ Assemble matrix | 1 0.180000 0.180000 -ZZZ Assemble vector | 1 0.010000 0.010000 -ZZZ Create Mesh | 1 8.610000 8.610000 -ZZZ Create RHS function | 1 0.020000 0.020000 +ZZZ Assemble matrix | 1 0.080000 0.080000 +ZZZ Assemble vector | 1 0.000000 0.000000 +ZZZ Create Mesh | 1 7.880000 7.880000 +ZZZ Create RHS function | 1 0.000000 0.000000 ZZZ Create boundary conditions | 1 0.000000 0.000000 -ZZZ Create facets and facet->cell connectivity | 1 0.070000 0.070000 -ZZZ Create forms | 1 0.010000 0.010000 +ZZZ Create facets and facet->cell connectivity | 1 0.050000 0.050000 +ZZZ Create forms | 1 0.000000 0.000000 ZZZ Create near-nullspace | 1 0.010000 0.010000 -ZZZ FunctionSpace | 1 0.000000 0.000000 -ZZZ Solve | 1 0.770000 0.770000 -*** Number of Krylov iterations: 22 +ZZZ FunctionSpace | 1 0.010000 0.010000 +ZZZ Solve | 1 0.380000 0.380000 +*** Number of Krylov iterations: 23 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** @@ -2357,17 +2393,17 @@ ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ -/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named ionos1-amd64 with 3 processors, by pbuilder1 Sun Sep 15 17:24:03 2024 +/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processors, by pbuilder2 Mon Oct 20 01:49:57 2025 Using Petsc Release Version 3.20.6, Mar 29, 2024 Max Max/Min Avg Total -Time (sec): 9.681e+00 1.000 9.681e+00 +Time (sec): 8.417e+00 1.000 8.417e+00 Objects: 0.000e+00 0.000 0.000e+00 -Flops: 2.192e+08 1.058 2.132e+08 6.397e+08 -Flops/sec: 2.265e+07 1.058 2.203e+07 6.608e+07 -MPI Msg Count: 8.930e+02 1.041 8.700e+02 2.610e+03 -MPI Msg Len (bytes): 6.863e+06 1.417 6.660e+03 1.738e+07 -MPI Reductions: 5.400e+02 1.000 +Flops: 2.313e+08 1.085 2.194e+08 6.581e+08 +Flops/sec: 2.748e+07 1.085 2.606e+07 7.818e+07 +MPI Msg Count: 9.190e+02 1.039 8.960e+02 2.688e+03 +MPI Msg Len (bytes): 6.676e+06 1.416 6.464e+03 1.738e+07 +MPI Reductions: 5.440e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops @@ -2375,7 +2411,7 @@ Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total - 0: Main Stage: 9.6812e+00 100.0% 6.3975e+08 100.0% 2.610e+03 100.0% 6.660e+03 100.0% 5.220e+02 96.7% + 0: Main Stage: 8.4171e+00 100.0% 6.5809e+08 100.0% 2.688e+03 100.0% 6.464e+03 100.0% 5.260e+02 96.7% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. @@ -2399,79 +2435,79 @@ --- Event Stage 0: Main Stage -BuildTwoSided 121 1.0 3.7461e-02 3.2 0.00e+00 0.0 2.2e+02 4.0e+00 1.2e+02 0 0 8 0 22 0 0 8 0 23 0 -BuildTwoSidedF 86 1.0 3.6635e-02 3.2 0.00e+00 0.0 1.1e+02 3.8e+04 8.6e+01 0 0 4 24 16 0 0 4 24 16 0 -MatMult 226 1.0 2.1355e-01 1.0 1.28e+08 1.1 1.4e+03 5.7e+03 0.0e+00 2 58 52 44 0 2 58 52 44 0 1729 -MatMultAdd 46 1.0 1.4589e-02 1.2 1.04e+07 1.0 1.8e+02 1.4e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 2099 -MatMultTranspose 46 1.0 2.2524e-02 1.0 1.04e+07 1.0 1.8e+02 1.4e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 1361 -MatSolve 23 0.0 3.3057e-03 0.0 1.65e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 498 -MatLUFactorSym 1 1.0 2.1231e-03 119.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatLUFactorNum 1 1.0 2.9486e-03 986.8 3.86e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1311 -MatConvert 1 1.0 3.5652e-04 1.1 0.00e+00 0.0 1.2e+01 7.1e+02 1.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatScale 4 1.0 1.1834e-03 1.5 4.53e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1125 -MatResidual 46 1.0 3.6469e-02 1.0 2.50e+07 1.1 2.8e+02 5.4e+03 0.0e+00 0 11 11 9 0 0 11 11 9 0 1967 -MatAssemblyBegin 59 1.0 5.5472e-02 2.0 0.00e+00 0.0 1.1e+02 3.8e+04 3.0e+01 0 0 4 24 6 0 0 4 24 6 0 -MatAssemblyEnd 59 1.0 3.5005e-02 1.0 7.79e+04 1.5 2.1e+02 3.9e+02 1.2e+02 0 0 8 0 22 0 0 8 0 23 6 -MatGetRowIJ 1 0.0 4.2308e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatCreateSubMat 2 1.0 5.6057e-03 1.0 0.00e+00 0.0 1.4e+01 1.8e+04 3.0e+01 0 0 1 1 6 0 0 1 1 6 0 -MatGetOrdering 1 0.0 1.6381e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatCoarsen 2 1.0 1.2633e-02 1.0 1.37e+05 1.0 2.8e+02 6.1e+02 1.0e+02 0 0 11 1 19 0 0 11 1 20 32 -MatZeroEntries 3 1.0 5.0718e-04 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatView 6 1.5 1.1582e-03 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 -MatAXPY 4 1.0 1.4226e-02 1.1 1.15e+05 1.1 2.4e+01 4.0e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 24 -MatTranspose 10 1.0 9.5469e-03 1.1 0.00e+00 0.0 1.3e+02 1.6e+03 3.6e+01 0 0 5 1 7 0 0 5 1 7 0 -MatMatMultSym 9 1.0 5.9629e-02 1.0 0.00e+00 0.0 7.5e+01 8.3e+03 3.0e+01 1 0 3 4 6 1 0 3 4 6 0 -MatMatMultNum 3 1.0 1.2283e-02 1.0 6.52e+06 1.1 1.5e+01 2.6e+04 3.0e+00 0 3 1 2 1 0 3 1 2 1 1525 -MatPtAPSymbolic 3 1.0 1.8723e-01 1.0 0.00e+00 0.0 9.9e+01 3.4e+04 2.1e+01 2 0 4 19 4 2 0 4 19 4 0 -MatPtAPNumeric 3 1.0 1.9079e-01 1.0 5.00e+07 1.1 6.6e+01 4.0e+04 1.8e+01 2 22 3 15 3 2 22 3 15 3 754 -MatGetLocalMat 9 1.0 3.7350e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatGetBrAoCol 9 1.0 4.5210e-03 1.1 0.00e+00 0.0 1.1e+02 3.2e+04 0.0e+00 0 0 4 21 0 0 0 4 21 0 0 -VecMDot 20 1.0 9.2824e-04 1.3 1.19e+06 1.1 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 3784 -VecTDot 46 1.0 1.5515e-03 1.1 9.36e+05 1.0 0.0e+00 0.0e+00 4.6e+01 0 0 0 0 9 0 0 0 0 9 1779 -VecNorm 45 1.0 2.6504e-03 1.8 7.06e+05 1.1 0.0e+00 0.0e+00 4.5e+01 0 0 0 0 8 0 0 0 0 9 786 -VecScale 22 1.0 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2.4e+01 9.5e+03 1.2e+01 0 0 1 1 2 0 0 1 1 2 0 + PCGAMGOptProl 2 1.0 3.3603e-02 1.0 2.09e+07 1.1 1.9e+02 8.3e+03 6.6e+01 0 9 7 9 12 0 9 7 9 13 1774 + GAMG smooth 2 1.0 2.5685e-02 1.0 7.06e+06 1.1 7.2e+01 1.4e+04 2.4e+01 0 3 3 6 4 0 3 3 6 5 779 + PCGAMGCreateL 2 1.0 2.4023e-01 1.0 5.51e+07 1.3 1.5e+02 4.1e+04 8.1e+01 3 22 6 35 15 3 22 6 35 15 607 + GAMG PtAP 2 1.0 2.3644e-01 1.0 5.51e+07 1.3 1.2e+02 4.8e+04 2.6e+01 3 22 4 33 5 3 22 4 33 5 617 + GAMG Reduce 1 1.0 3.8123e-03 1.0 0.00e+00 0.0 2.9e+01 1.3e+04 5.5e+01 0 0 1 2 10 0 0 1 2 10 0 +PCGAMG Gal l00 1 1.0 1.5795e-01 1.0 3.55e+07 1.1 6.0e+01 6.5e+04 1.3e+01 2 16 2 23 2 2 16 2 23 2 651 +PCGAMG Opt l00 1 1.0 1.8561e-02 1.0 5.02e+06 1.0 3.6e+01 2.2e+04 1.1e+01 0 2 1 5 2 0 2 1 5 2 809 +PCGAMG Gal l01 1 1.0 7.8534e-02 1.0 1.95e+07 2.0 6.0e+01 3.0e+04 1.3e+01 1 7 2 11 2 1 7 2 11 2 548 +PCGAMG Opt l01 1 1.0 4.0111e-03 1.0 1.51e+06 1.7 3.6e+01 4.8e+03 1.1e+01 0 1 1 1 2 0 1 1 1 2 866 +PCSetUp 2 1.0 3.0709e-01 1.0 7.62e+07 1.1 9.5e+02 8.9e+03 3.8e+02 4 32 35 49 70 4 32 35 49 72 688 +PCSetUpOnBlocks 24 1.0 4.6838e-03 43.4 5.39e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1152 +PCApply 24 1.0 6.6236e-02 1.0 1.31e+08 1.1 1.5e+03 4.2e+03 2.4e+01 1 58 57 37 4 1 58 57 37 5 5749 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. @@ -2494,9 +2530,9 @@ Discrete System 4 4 Weak Form 4 4 ======================================================================================================================== -Average time to get PetscTime(): 7.46e-08 -Average time for MPI_Barrier(): 6.4776e-06 -Average time for zero size MPI_Send(): 3.081e-06 +Average time to get PetscTime(): 4.18e-08 +Average time for MPI_Barrier(): 2.345e-06 +Average time for zero size MPI_Send(): 9.43e-07 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type elasticity # (source: command line) @@ -2559,66 +2595,66 @@ Option left: name:--problem_type value: elasticity source: command line Option left: name:--scaling_type value: weak source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line -2024-09-15 17:24:03.299 ( 9.837s) [RANK: 0 ] loguru.cpp:526 INFO| atexit +2025-10-20 01:49:57.698 ( 8.548s) [RANK: 0 ] loguru.cpp:526 INFO| atexit ==== elasticity strong scaling (3 processes with ndofs=30000) ==== -2024-09-15 17:24:03.915 ( 0.151s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks -2024-09-15 17:24:03.915 ( 0.151s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph -2024-09-15 17:24:03.915 ( 0.151s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-09-15 17:24:03.937 ( 0.173s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph -2024-09-15 17:24:03.938 ( 0.174s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:03.938 ( 0.174s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:03.938 ( 0.174s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 -2024-09-15 17:24:03.941 ( 0.177s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 66332, non-local: 962) -2024-09-15 17:24:03.941 ( 0.177s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH -2024-09-15 17:24:13.167 ( 9.403s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-09-15 17:24:13.167 ( 9.403s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-09-15 17:24:13.171 ( 9.407s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-09-15 17:24:13.196 ( 9.432s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(119) 16546-1181 -2024-09-15 17:24:13.199 ( 9.436s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) -2024-09-15 17:24:13.199 ( 9.436s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) -2024-09-15 17:24:13.209 ( 9.445s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-09-15 17:24:13.209 ( 9.445s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-09-15 17:24:13.214 ( 9.451s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices -2024-09-15 17:24:13.214 ( 9.451s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 -2024-09-15 17:24:13.216 ( 9.452s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 -2024-09-15 17:24:13.217 ( 9.454s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-09-15 17:24:13.218 ( 9.454s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-09-15 17:24:13.223 ( 9.459s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:13.225 ( 9.461s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:13.225 ( 9.461s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:13.225 ( 9.461s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:13.228 ( 9.464s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-09-15 17:24:13.228 ( 9.464s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-09-15 17:24:13.228 ( 9.464s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 -2024-09-15 17:24:13.228 ( 9.465s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:13.229 ( 9.465s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:13.229 ( 9.465s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 -2024-09-15 17:24:13.229 ( 9.465s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-09-15 17:24:13.229 ( 9.466s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17088x4 -2024-09-15 17:24:13.233 ( 9.469s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-09-15 17:24:13.233 ( 9.469s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-09-15 17:24:13.233 ( 9.469s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-09-15 17:24:13.234 ( 9.470s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:13.234 ( 9.470s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:49:58.180 ( 0.081s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks +2025-10-20 01:49:58.180 ( 0.081s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph +2025-10-20 01:49:58.180 ( 0.081s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2025-10-20 01:49:58.201 ( 0.103s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph +2025-10-20 01:49:58.201 ( 0.103s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:49:58.201 ( 0.103s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:49:58.201 ( 0.103s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 +2025-10-20 01:49:58.203 ( 0.105s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 66332, non-local: 962) +2025-10-20 01:49:58.204 ( 0.105s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH +2025-10-20 01:50:05.969 ( 7.870s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2025-10-20 01:50:05.969 ( 7.870s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2025-10-20 01:50:05.971 ( 7.872s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2025-10-20 01:50:05.991 ( 7.892s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(118) 1205-16941 +2025-10-20 01:50:05.993 ( 7.895s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) +2025-10-20 01:50:05.993 ( 7.895s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) +2025-10-20 01:50:05.995 ( 7.896s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2025-10-20 01:50:05.995 ( 7.896s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2025-10-20 01:50:05.999 ( 7.901s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices +2025-10-20 01:50:05.999 ( 7.901s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 +2025-10-20 01:50:06.000 ( 7.901s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 +2025-10-20 01:50:06.001 ( 7.903s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2025-10-20 01:50:06.001 ( 7.903s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2025-10-20 01:50:06.006 ( 7.908s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:06.007 ( 7.908s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:06.007 ( 7.908s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:06.007 ( 7.908s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:06.008 ( 7.910s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2025-10-20 01:50:06.008 ( 7.910s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2025-10-20 01:50:06.008 ( 7.910s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 +2025-10-20 01:50:06.009 ( 7.910s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:06.009 ( 7.910s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:06.009 ( 7.910s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 +2025-10-20 01:50:06.009 ( 7.911s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2025-10-20 01:50:06.009 ( 7.911s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17351x4 +2025-10-20 01:50:06.012 ( 7.913s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2025-10-20 01:50:06.012 ( 7.913s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2025-10-20 01:50:06.012 ( 7.913s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2025-10-20 01:50:06.012 ( 7.914s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:06.012 ( 7.914s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (24x19x19) to be refined 0 times -2024-09-15 17:24:13.236 ( 9.472s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 -2024-09-15 17:24:13.246 ( 9.482s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:13.248 ( 9.484s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:13.307 ( 9.543s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:13.307 ( 9.543s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:13.308 ( 9.545s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) -2024-09-15 17:24:13.308 ( 9.545s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. -2024-09-15 17:24:13.310 ( 9.546s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-09-15 17:24:13.310 ( 9.547s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17088x4 -2024-09-15 17:24:13.314 ( 9.550s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-09-15 17:24:13.314 ( 9.550s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-09-15 17:24:13.314 ( 9.550s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-09-15 17:24:13.315 ( 9.552s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:13.316 ( 9.552s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:13.316 ( 9.553s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-09-15 17:24:13.317 ( 9.553s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-09-15 17:24:13.317 ( 9.553s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) -2024-09-15 17:24:13.358 ( 9.594s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 204 to 554 +2025-10-20 01:50:06.013 ( 7.915s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 +2025-10-20 01:50:06.018 ( 7.919s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:06.018 ( 7.919s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:06.066 ( 7.967s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:06.066 ( 7.967s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:06.066 ( 7.968s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) +2025-10-20 01:50:06.066 ( 7.968s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. +2025-10-20 01:50:06.067 ( 7.969s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2025-10-20 01:50:06.067 ( 7.969s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17351x4 +2025-10-20 01:50:06.069 ( 7.970s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2025-10-20 01:50:06.069 ( 7.971s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2025-10-20 01:50:06.069 ( 7.971s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2025-10-20 01:50:06.069 ( 7.971s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:06.069 ( 7.971s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:06.070 ( 7.971s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2025-10-20 01:50:06.070 ( 7.972s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2025-10-20 01:50:06.070 ( 7.972s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) +2025-10-20 01:50:06.081 ( 7.983s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 198 to 537 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 @@ -2632,7 +2668,7 @@ Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- -2024-09-15 17:24:13.649 ( 9.885s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. +2025-10-20 01:50:06.167 ( 8.069s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero @@ -2652,7 +2688,7 @@ MIS-k aggressive coarsening MIS-2 coarsening on aggressive levels Number smoothing steps 1 - Complexity: grid = 1.0714 operator = 1.28221 + Complexity: grid = 1.0698 operator = 1.26915 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly @@ -2677,34 +2713,34 @@ tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd - factor fill ratio given 5., needed 1.07 + factor fill ratio given 5., needed 1.08277 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij - rows=240, cols=240, bs=6 + rows=210, cols=210, bs=6 package used to perform factorization: petsc - total: nonzeros=53928, allocated nonzeros=53928 - using I-node routines: found 60 nodes, limit used is 5 + total: nonzeros=40500, allocated nonzeros=40500 + using I-node routines: found 57 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij - rows=240, cols=240, bs=6 - total: nonzeros=50400, allocated nonzeros=50400 + rows=210, cols=210, bs=6 + total: nonzeros=37404, allocated nonzeros=37404 total number of mallocs used during MatSetValues calls=0 - using I-node routines: found 73 nodes, limit used is 5 + using I-node routines: found 68 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij - rows=240, cols=240, bs=6 - total: nonzeros=50400, allocated nonzeros=50400 + rows=210, cols=210, bs=6 + total: nonzeros=37404, allocated nonzeros=37404 total number of mallocs used during MatSetValues calls=0 - using I-node (on process 0) routines: found 73 nodes, limit used is 5 + using I-node (on process 0) routines: found 68 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind - eigenvalue targets used: min 0.338003, max 3.71803 - eigenvalues provided (min 2.17206e-06, max 3.38003) with transform: [0. 0.1; 0. 1.1] + eigenvalue targets used: min 0.310866, max 3.41953 + eigenvalues provided (min 1.55102e-06, max 3.10866) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning @@ -2715,18 +2751,18 @@ linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij - rows=1902, cols=1902, bs=6 - total: nonzeros=302796, allocated nonzeros=302796 + rows=1884, cols=1884, bs=6 + total: nonzeros=299448, allocated nonzeros=299448 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation - using I-node (on process 0) routines: found 194 nodes, limit used is 5 + using I-node (on process 0) routines: found 188 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind - eigenvalue targets used: min 0.258595, max 2.84455 - eigenvalues provided (min 0.0733333, max 2.58595) with transform: [0. 0.1; 0. 1.1] + eigenvalue targets used: min 0.257672, max 2.83439 + eigenvalues provided (min 0.0661301, max 2.57672) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning @@ -2741,7 +2777,7 @@ total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space - using I-node (on process 0) routines: found 3364 nodes, limit used is 5 + using I-node (on process 0) routines: found 3389 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes @@ -2750,46 +2786,46 @@ total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space - using I-node (on process 0) routines: found 3364 nodes, limit used is 5 + using I-node (on process 0) routines: found 3389 nodes, limit used is 5 [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- -Build BoxMesh (tetrahedra) | 1 9.330000 9.330000 -Build dofmap data | 2 0.010000 0.020000 -Build sparsity | 1 0.010000 0.010000 +Build BoxMesh (tetrahedra) | 1 7.840000 7.840000 +Build dofmap data | 2 0.000000 0.000000 +Build sparsity | 1 0.000000 0.000000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 -Compute entities of dim = 2 | 1 0.070000 0.070000 -Compute graph partition (SCOTCH) | 1 9.210000 9.210000 -Compute local part of mesh dual graph | 2 0.025000 0.050000 +Compute entities of dim = 2 | 1 0.050000 0.050000 +Compute graph partition (SCOTCH) | 1 7.770000 7.770000 +Compute local part of mesh dual graph | 2 0.020000 0.040000 Compute local-to-local map | 1 0.000000 0.000000 -Compute non-local part of mesh dual graph | 1 0.000000 0.000000 +Compute non-local part of mesh dual graph | 1 0.010000 0.010000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 -Distribute AdjacencyList nodes to destination ranks | 1 0.030000 0.030000 +Distribute AdjacencyList nodes to destination ranks | 1 0.010000 0.010000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 -GPS: create_level_structure | 2 0.000000 0.000000 -Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 -Init MPI | 1 0.150000 0.150000 +GPS: create_level_structure | 3 0.000000 0.000000 +Gibbs-Poole-Stockmeyer ordering | 1 0.000000 0.000000 +Init MPI | 1 0.080000 0.080000 Init PETSc | 1 0.000000 0.000000 -Init dofmap from element dofmap | 2 0.010000 0.020000 +Init dofmap from element dofmap | 2 0.000000 0.000000 Init logging | 1 0.000000 0.000000 -PETSc Krylov solver | 1 1.050000 1.050000 +PETSc Krylov solver | 1 0.380000 0.380000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 -SCOTCH: call SCOTCH_dgraphPart | 1 9.210000 9.210000 +SCOTCH: call SCOTCH_dgraphPart | 1 7.770000 7.770000 SparsityPattern::finalize | 1 0.010000 0.010000 -Topology: create | 1 0.020000 0.020000 +Topology: create | 1 0.030000 0.030000 Topology: determine shared index ownership | 1 0.010000 0.010000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.000000 0.000000 -ZZZ Assemble matrix | 1 0.250000 0.250000 -ZZZ Assemble vector | 1 0.020000 0.020000 -ZZZ Create Mesh | 1 9.330000 9.330000 -ZZZ Create RHS function | 1 0.020000 0.020000 +ZZZ Assemble matrix | 1 0.070000 0.070000 +ZZZ Assemble vector | 1 0.010000 0.010000 +ZZZ Create Mesh | 1 7.840000 7.840000 +ZZZ Create RHS function | 1 0.000000 0.000000 ZZZ Create boundary conditions | 1 0.000000 0.000000 -ZZZ Create facets and facet->cell connectivity | 1 0.070000 0.070000 +ZZZ Create facets and facet->cell connectivity | 1 0.050000 0.050000 ZZZ Create forms | 1 0.000000 0.000000 -ZZZ Create near-nullspace | 1 0.020000 0.020000 +ZZZ Create near-nullspace | 1 0.000000 0.000000 ZZZ FunctionSpace | 1 0.010000 0.010000 -ZZZ Solve | 1 1.050000 1.050000 +ZZZ Solve | 1 0.390000 0.390000 *** Number of Krylov iterations: 24 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** @@ -2798,17 +2834,17 @@ ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ -/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named ionos1-amd64 with 3 processors, by pbuilder1 Sun Sep 15 17:24:14 2024 +/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processors, by pbuilder2 Mon Oct 20 01:50:06 2025 Using Petsc Release Version 3.20.6, Mar 29, 2024 Max Max/Min Avg Total -Time (sec): 1.079e+01 1.000 1.079e+01 +Time (sec): 8.378e+00 1.000 8.378e+00 Objects: 0.000e+00 0.000 0.000e+00 -Flops: 2.370e+08 1.070 2.289e+08 6.866e+08 -Flops/sec: 2.196e+07 1.070 2.121e+07 6.362e+07 -MPI Msg Count: 9.430e+02 1.041 9.187e+02 2.756e+03 -MPI Msg Len (bytes): 6.981e+06 1.397 6.369e+03 1.755e+07 -MPI Reductions: 5.490e+02 1.000 +Flops: 2.411e+08 1.135 2.263e+08 6.788e+08 +Flops/sec: 2.878e+07 1.135 2.701e+07 8.102e+07 +MPI Msg Count: 9.410e+02 1.042 9.167e+02 2.750e+03 +MPI Msg Len (bytes): 6.787e+06 1.363 6.364e+03 1.750e+07 +MPI Reductions: 5.480e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops @@ -2816,7 +2852,7 @@ Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total - 0: Main Stage: 1.0793e+01 100.0% 6.8662e+08 100.0% 2.756e+03 100.0% 6.369e+03 100.0% 5.310e+02 96.7% + 0: Main Stage: 8.3777e+00 100.0% 6.7877e+08 100.0% 2.750e+03 100.0% 6.364e+03 100.0% 5.300e+02 96.7% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. @@ -2840,79 +2876,79 @@ --- Event Stage 0: Main Stage -BuildTwoSided 121 1.0 2.2226e-01 52.9 0.00e+00 0.0 2.2e+02 4.0e+00 1.2e+02 1 0 8 0 22 1 0 8 0 23 0 -BuildTwoSidedF 86 1.0 2.2086e-01 49.8 0.00e+00 0.0 1.1e+02 3.7e+04 8.6e+01 1 0 4 23 16 1 0 4 23 16 0 -MatMult 244 1.0 2.9033e-01 1.0 1.38e+08 1.1 1.5e+03 5.5e+03 0.0e+00 3 58 53 46 0 3 58 53 46 0 1370 -MatMultAdd 50 1.0 2.7989e-02 1.1 1.15e+07 1.0 2.0e+02 1.3e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 1199 -MatMultTranspose 50 1.0 3.4589e-02 1.1 1.15e+07 1.0 2.0e+02 1.3e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 971 -MatSolve 25 0.0 5.3550e-03 0.0 2.69e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 502 -MatLUFactorSym 1 1.0 2.5800e-03 143.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatLUFactorNum 1 1.0 5.7630e-03 1455.3 6.84e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1187 -MatConvert 1 1.0 5.2731e-04 1.3 0.00e+00 0.0 1.2e+01 7.0e+02 1.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatScale 4 1.0 1.4407e-03 1.9 4.59e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 932 -MatResidual 50 1.0 5.3326e-02 1.1 2.71e+07 1.1 3.0e+02 5.2e+03 0.0e+00 0 11 11 9 0 0 11 11 9 0 1457 -MatAssemblyBegin 59 1.0 2.3511e-01 7.5 0.00e+00 0.0 1.1e+02 3.7e+04 3.0e+01 1 0 4 23 5 1 0 4 23 6 0 -MatAssemblyEnd 59 1.0 4.6842e-02 1.1 8.90e+04 1.8 2.1e+02 3.8e+02 1.2e+02 0 0 8 0 22 0 0 8 0 23 4 -MatGetRowIJ 1 0.0 6.8998e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatCreateSubMat 2 1.0 9.9398e-03 1.0 0.00e+00 0.0 1.4e+01 2.8e+04 3.0e+01 0 0 1 2 5 0 0 1 2 6 0 -MatGetOrdering 1 0.0 1.6858e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatCoarsen 2 1.0 1.6347e-02 1.0 1.37e+05 1.0 2.9e+02 6.1e+02 1.0e+02 0 0 11 1 19 0 0 11 1 20 25 -MatZeroEntries 3 1.0 4.2794e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatView 6 1.5 8.9876e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 -MatAXPY 4 1.0 1.7406e-02 1.1 1.14e+05 1.0 2.4e+01 3.9e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 19 -MatTranspose 10 1.0 1.3220e-02 1.4 0.00e+00 0.0 1.3e+02 1.6e+03 3.6e+01 0 0 5 1 7 0 0 5 1 7 0 -MatMatMultSym 9 1.0 7.2400e-02 1.2 0.00e+00 0.0 7.5e+01 8.0e+03 3.0e+01 1 0 3 3 5 1 0 3 3 6 0 -MatMatMultNum 3 1.0 1.6161e-02 1.0 6.51e+06 1.1 1.5e+01 2.5e+04 3.0e+00 0 3 1 2 1 0 3 1 2 1 1155 -MatPtAPSymbolic 3 1.0 2.3694e-01 1.0 0.00e+00 0.0 9.9e+01 3.3e+04 2.1e+01 2 0 4 18 4 2 0 4 18 4 0 -MatPtAPNumeric 3 1.0 2.8351e-01 1.0 5.53e+07 1.2 6.6e+01 3.9e+04 1.8e+01 3 22 2 15 3 3 22 2 15 3 530 -MatGetLocalMat 9 1.0 4.9718e-03 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatGetBrAoCol 9 1.0 6.0484e-03 1.0 0.00e+00 0.0 1.1e+02 3.1e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 -VecMDot 20 1.0 2.3345e-03 2.3 1.17e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 1503 -VecTDot 50 1.0 3.3323e-03 2.2 1.01e+06 1.0 0.0e+00 0.0e+00 5.0e+01 0 0 0 0 9 0 0 0 0 9 900 -VecNorm 47 1.0 6.0634e-03 4.1 7.39e+05 1.0 0.0e+00 0.0e+00 4.7e+01 0 0 0 0 9 0 0 0 0 9 363 -VecScale 22 1.0 2.2718e-04 2.4 1.17e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1545 -VecCopy 154 1.0 1.5260e-03 2.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecSet 176 1.0 8.0955e-04 2.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecAXPY 50 1.0 1.6581e-03 2.0 9.90e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1775 -VecAYPX 323 1.0 5.8110e-03 2.1 2.60e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1335 -VecAXPBYCZ 100 1.0 1.8701e-03 2.1 2.67e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4265 -VecMAXPY 22 1.0 8.4444e-04 1.9 1.39e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4911 -VecAssemblyBegin 57 1.0 3.0869e-03 4.8 0.00e+00 0.0 0.0e+00 0.0e+00 5.6e+01 0 0 0 0 10 0 0 0 0 11 0 -VecAssemblyEnd 57 1.0 1.0841e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecPointwiseMult 222 1.0 7.6618e-03 3.0 1.18e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 462 -VecScatterBegin 401 1.0 5.8235e-03 1.9 0.00e+00 0.0 2.0e+03 4.3e+03 0.0e+00 0 0 74 49 0 0 0 74 49 0 0 -VecScatterEnd 401 1.0 1.8358e-01 25.0 1.46e+04 2.2 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 -VecNormalize 22 1.0 1.8901e-03 2.6 3.52e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 4 0 0 0 0 4 557 -SFSetGraph 35 1.0 2.7639e-04 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetUp 35 1.0 2.3739e-03 1.5 0.00e+00 0.0 3.2e+02 3.7e+02 3.5e+01 0 0 12 1 6 0 0 12 1 7 0 -SFBcastBegin 15 1.0 1.1777e-04 1.5 0.00e+00 0.0 9.0e+01 6.3e+02 0.0e+00 0 0 3 0 0 0 0 3 0 0 0 -SFBcastEnd 15 1.0 1.8126e-04 2.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFReduceBegin 4 1.0 1.1171e-04 1.2 0.00e+00 0.0 1.8e+01 5.4e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 -SFReduceEnd 4 1.0 3.9304e-05 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFPack 420 1.0 2.4800e-03 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFUnpack 420 1.0 3.0094e-04 2.1 1.46e+04 2.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 108 -KSPSetUp 7 1.0 7.9576e-04 2.9 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSolve 1 1.0 3.6831e-01 1.0 1.59e+08 1.0 1.7e+03 4.5e+03 1.0e+02 3 68 63 45 18 3 68 63 45 19 1276 -KSPGMRESOrthog 20 1.0 2.7476e-03 1.5 2.35e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 2554 -PCSetUp_GAMG+ 1 1.0 6.8347e-01 1.0 7.61e+07 1.1 9.6e+02 8.8e+03 3.8e+02 6 31 35 48 69 6 31 35 48 72 308 - PCGAMGCreateG 2 1.0 3.8581e-02 1.0 5.00e+04 1.0 1.3e+02 1.5e+03 5.0e+01 0 0 5 1 9 0 0 5 1 9 4 - GAMG Coarsen 2 1.0 1.7028e-02 1.0 1.37e+05 1.0 2.9e+02 6.1e+02 1.0e+02 0 0 11 1 19 0 0 11 1 20 24 - GAMG MIS/Agg 2 1.0 1.6373e-02 1.0 1.37e+05 1.0 2.9e+02 6.1e+02 1.0e+02 0 0 11 1 19 0 0 11 1 20 25 - PCGAMGProl 2 1.0 1.8699e-02 1.0 0.00e+00 0.0 1.9e+02 1.7e+03 7.6e+01 0 0 7 2 14 0 0 7 2 14 0 - GAMG Prol-col 2 1.0 7.0802e-03 1.0 0.00e+00 0.0 1.7e+02 6.6e+02 5.6e+01 0 0 6 1 10 0 0 6 1 11 0 - GAMG Prol-lift 2 1.0 1.1230e-02 1.0 0.00e+00 0.0 2.4e+01 8.8e+03 1.2e+01 0 0 1 1 2 0 0 1 1 2 0 - PCGAMGOptProl 2 1.0 8.6412e-02 1.0 2.08e+07 1.1 1.9e+02 8.3e+03 6.6e+01 1 9 7 9 12 1 9 7 9 12 695 - GAMG smooth 2 1.0 6.0620e-02 1.0 7.02e+06 1.1 7.2e+01 1.3e+04 2.4e+01 1 3 3 6 4 1 3 3 6 5 333 - PCGAMGCreateL 2 1.0 5.2123e-01 1.0 5.51e+07 1.2 1.5e+02 4.1e+04 8.1e+01 5 22 5 35 15 5 22 5 35 15 288 - GAMG PtAP 2 1.0 5.1008e-01 1.0 5.51e+07 1.2 1.2e+02 4.8e+04 2.6e+01 5 22 4 33 5 5 22 4 33 5 294 - GAMG Reduce 1 1.0 1.1249e-02 1.0 0.00e+00 0.0 2.9e+01 1.5e+04 5.5e+01 0 0 1 2 10 0 0 1 2 10 0 -PCGAMG Gal l00 1 1.0 3.4956e-01 1.0 3.52e+07 1.0 6.0e+01 6.3e+04 1.3e+01 3 15 2 21 2 3 15 2 21 2 299 -PCGAMG Opt l00 1 1.0 4.2256e-02 1.0 5.03e+06 1.0 3.6e+01 2.2e+04 1.1e+01 0 2 1 4 2 0 2 1 4 2 355 -PCGAMG Gal l01 1 1.0 1.6085e-01 1.0 2.00e+07 1.6 6.0e+01 3.3e+04 1.3e+01 1 7 2 11 2 1 7 2 11 2 283 -PCGAMG Opt l01 1 1.0 8.7740e-03 1.0 1.47e+06 1.4 3.6e+01 5.1e+03 1.1e+01 0 1 1 1 2 0 1 1 1 2 414 -PCSetUp 2 1.0 6.9213e-01 1.0 7.61e+07 1.1 9.6e+02 8.8e+03 3.8e+02 6 32 35 48 69 6 32 35 48 72 314 -PCSetUpOnBlocks 25 1.0 8.7216e-03 42.1 6.84e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 784 -PCApply 25 1.0 3.2053e-01 1.0 1.36e+08 1.1 1.6e+03 4.2e+03 2.5e+01 3 59 58 38 5 3 59 58 38 5 1254 +BuildTwoSided 121 1.0 3.3180e-02 16.2 0.00e+00 0.0 2.2e+02 4.0e+00 1.2e+02 0 0 8 0 22 0 0 8 0 23 0 +BuildTwoSidedF 86 1.0 3.3069e-02 13.7 0.00e+00 0.0 1.1e+02 3.6e+04 8.6e+01 0 0 4 23 16 0 0 4 23 16 0 +MatMult 244 1.0 6.2112e-02 1.0 1.40e+08 1.1 1.5e+03 5.4e+03 0.0e+00 1 58 53 46 0 1 58 53 46 0 6393 +MatMultAdd 50 1.0 5.7575e-03 1.1 1.18e+07 1.1 2.0e+02 1.4e+03 0.0e+00 0 5 7 2 0 0 5 7 2 0 5807 +MatMultTranspose 50 1.0 7.8790e-03 1.0 1.18e+07 1.1 2.0e+02 1.4e+03 0.0e+00 0 5 7 2 0 0 5 7 2 0 4248 +MatSolve 25 0.0 1.0274e-03 0.0 2.02e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1966 +MatLUFactorSym 1 1.0 1.6714e-03 176.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatLUFactorNum 1 1.0 2.0419e-03 1499.2 4.69e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2299 +MatConvert 1 1.0 1.4270e-04 1.0 0.00e+00 0.0 1.2e+01 6.9e+02 1.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatScale 4 1.0 3.2757e-04 1.0 4.72e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4083 +MatResidual 50 1.0 1.1580e-02 1.0 2.76e+07 1.1 3.0e+02 5.1e+03 0.0e+00 0 11 11 9 0 0 11 11 9 0 6697 +MatAssemblyBegin 59 1.0 4.1868e-02 3.1 0.00e+00 0.0 1.1e+02 3.6e+04 3.0e+01 0 0 4 23 5 0 0 4 23 6 0 +MatAssemblyEnd 59 1.0 2.0191e-02 1.0 9.59e+04 2.2 2.1e+02 3.8e+02 1.2e+02 0 0 8 0 22 0 0 8 0 23 10 +MatGetRowIJ 1 0.0 4.5554e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatCreateSubMat 2 1.0 3.1137e-03 1.0 0.00e+00 0.0 1.4e+01 2.5e+04 3.0e+01 0 0 1 2 5 0 0 1 2 6 0 +MatGetOrdering 1 0.0 1.0352e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatCoarsen 2 1.0 7.5578e-03 1.0 1.37e+05 1.0 2.8e+02 6.2e+02 1.0e+02 0 0 10 1 19 0 0 10 1 20 54 +MatZeroEntries 3 1.0 3.1906e-04 2.9 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatView 6 1.5 1.1486e-03 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 +MatAXPY 4 1.0 5.3556e-03 1.0 1.15e+05 1.0 2.4e+01 3.9e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 63 +MatTranspose 10 1.0 5.9805e-03 1.1 0.00e+00 0.0 1.3e+02 1.6e+03 3.6e+01 0 0 5 1 7 0 0 5 1 7 0 +MatMatMultSym 9 1.0 3.2275e-02 1.1 0.00e+00 0.0 7.5e+01 7.9e+03 3.0e+01 0 0 3 3 5 0 0 3 3 6 0 +MatMatMultNum 3 1.0 6.3448e-03 1.0 6.64e+06 1.1 1.5e+01 2.5e+04 3.0e+00 0 3 1 2 1 0 3 1 2 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3.0137e-01 1.0 7.74e+07 1.2 9.5e+02 8.9e+03 3.8e+02 4 30 35 48 69 4 30 35 48 72 685 + PCGAMGCreateG 2 1.0 1.2139e-02 1.0 5.03e+04 1.0 1.3e+02 1.5e+03 5.0e+01 0 0 5 1 9 0 0 5 1 9 12 + GAMG Coarsen 2 1.0 7.9630e-03 1.0 1.37e+05 1.0 2.8e+02 6.2e+02 1.0e+02 0 0 10 1 19 0 0 10 1 20 51 + GAMG MIS/Agg 2 1.0 7.5708e-03 1.0 1.37e+05 1.0 2.8e+02 6.2e+02 1.0e+02 0 0 10 1 19 0 0 10 1 20 54 + PCGAMGProl 2 1.0 7.5377e-03 1.0 0.00e+00 0.0 1.9e+02 1.7e+03 7.6e+01 0 0 7 2 14 0 0 7 2 14 0 + GAMG Prol-col 2 1.0 2.5011e-03 1.0 0.00e+00 0.0 1.7e+02 6.6e+02 5.6e+01 0 0 6 1 10 0 0 6 1 11 0 + GAMG Prol-lift 2 1.0 4.8574e-03 1.0 0.00e+00 0.0 2.4e+01 8.9e+03 1.2e+01 0 0 1 1 2 0 0 1 1 2 0 + PCGAMGOptProl 2 1.0 3.2400e-02 1.0 2.12e+07 1.1 1.9e+02 8.2e+03 6.6e+01 0 9 7 9 12 0 9 7 9 12 1851 + GAMG smooth 2 1.0 2.4824e-02 1.0 7.17e+06 1.1 7.2e+01 1.3e+04 2.4e+01 0 3 3 5 4 0 3 3 5 5 811 + PCGAMGCreateL 2 1.0 2.4067e-01 1.0 5.60e+07 1.3 1.5e+02 4.1e+04 8.1e+01 3 22 5 35 15 3 22 5 35 15 607 + GAMG PtAP 2 1.0 2.3718e-01 1.0 5.60e+07 1.3 1.2e+02 4.8e+04 2.6e+01 3 22 4 33 5 3 22 4 33 5 615 + GAMG Reduce 1 1.0 3.5182e-03 1.0 0.00e+00 0.0 2.9e+01 1.3e+04 5.5e+01 0 0 1 2 10 0 0 1 2 10 0 +PCGAMG Gal l00 1 1.0 1.6331e-01 1.0 3.69e+07 1.1 6.0e+01 7.0e+04 1.3e+01 2 15 2 24 2 2 15 2 24 2 643 +PCGAMG Opt l00 1 1.0 1.7557e-02 1.0 5.05e+06 1.0 3.6e+01 2.2e+04 1.1e+01 0 2 1 4 2 0 2 1 4 2 855 +PCGAMG Gal l01 1 1.0 7.3874e-02 1.0 1.91e+07 1.8 6.0e+01 2.6e+04 1.3e+01 1 6 2 9 2 1 6 2 9 2 555 +PCGAMG Opt l01 1 1.0 4.1900e-03 1.0 1.60e+06 1.6 3.6e+01 5.2e+03 1.1e+01 0 1 1 1 2 0 1 1 1 2 858 +PCSetUp 2 1.0 3.0526e-01 1.0 7.74e+07 1.2 9.5e+02 8.9e+03 3.8e+02 4 31 35 48 69 4 31 35 48 72 692 +PCSetUpOnBlocks 25 1.0 3.9069e-03 31.8 4.69e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1202 +PCApply 25 1.0 7.2329e-02 1.0 1.39e+08 1.1 1.6e+03 4.2e+03 2.5e+01 1 59 58 38 5 1 59 58 38 5 5505 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. @@ -2935,9 +2971,9 @@ Discrete System 4 4 Weak Form 4 4 ======================================================================================================================== -Average time to get PetscTime(): 7.4e-08 -Average time for MPI_Barrier(): 2.496e-06 -Average time for zero size MPI_Send(): 1.24e-06 +Average time to get PetscTime(): 4.26e-08 +Average time for MPI_Barrier(): 1.5296e-06 +Average time for zero size MPI_Send(): 7.70667e-07 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type elasticity # (source: command line) @@ -3000,68 +3036,68 @@ Option left: name:--problem_type value: elasticity source: command line Option left: name:--scaling_type value: strong source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line -2024-09-15 17:24:14.775 ( 11.011s) [RANK: 0 ] loguru.cpp:526 INFO| atexit +2025-10-20 01:50:06.736 ( 8.638s) [RANK: 0 ] loguru.cpp:526 INFO| atexit ==== poisson weak scaling (3 processes with ndofs=10000) ==== -2024-09-15 17:24:15.396 ( 0.097s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks -2024-09-15 17:24:15.396 ( 0.097s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph -2024-09-15 17:24:15.396 ( 0.097s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-09-15 17:24:15.477 ( 0.178s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph -2024-09-15 17:24:15.477 ( 0.179s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:15.477 ( 0.179s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:15.477 ( 0.179s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 -2024-09-15 17:24:15.482 ( 0.184s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 210000, non-local: 1800) -2024-09-15 17:24:15.482 ( 0.184s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH -2024-09-15 17:24:29.564 ( 14.265s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-09-15 17:24:29.564 ( 14.265s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-09-15 17:24:29.579 ( 14.281s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-09-15 17:24:29.658 ( 14.359s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(159) 1058-51356 -2024-09-15 17:24:29.671 ( 14.372s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) -2024-09-15 17:24:29.671 ( 14.372s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) -2024-09-15 17:24:29.677 ( 14.378s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-09-15 17:24:29.677 ( 14.379s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-09-15 17:24:29.695 ( 14.397s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices -2024-09-15 17:24:29.695 ( 14.397s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 -2024-09-15 17:24:29.695 ( 14.397s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 -2024-09-15 17:24:29.701 ( 14.402s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-09-15 17:24:29.701 ( 14.402s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-09-15 17:24:29.721 ( 14.422s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:29.721 ( 14.422s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:29.721 ( 14.422s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:29.721 ( 14.422s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:29.727 ( 14.429s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-09-15 17:24:29.727 ( 14.429s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-09-15 17:24:29.727 ( 14.429s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 -2024-09-15 17:24:29.728 ( 14.429s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:29.728 ( 14.430s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:29.728 ( 14.430s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 -2024-09-15 17:24:29.729 ( 14.430s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-09-15 17:24:29.730 ( 14.431s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53191x4 -2024-09-15 17:24:29.739 ( 14.440s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-09-15 17:24:29.739 ( 14.440s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-09-15 17:24:29.740 ( 14.441s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-09-15 17:24:29.740 ( 14.442s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:29.740 ( 14.442s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:07.282 ( 0.101s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks +2025-10-20 01:50:07.282 ( 0.101s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph +2025-10-20 01:50:07.282 ( 0.101s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2025-10-20 01:50:07.326 ( 0.144s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph +2025-10-20 01:50:07.349 ( 0.168s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:07.349 ( 0.168s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:07.349 ( 0.168s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 +2025-10-20 01:50:07.353 ( 0.172s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 210000, non-local: 1800) +2025-10-20 01:50:07.353 ( 0.172s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH +2025-10-20 01:50:20.883 ( 13.702s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2025-10-20 01:50:20.883 ( 13.702s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2025-10-20 01:50:20.891 ( 13.710s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2025-10-20 01:50:20.941 ( 13.760s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(154) 51450-1562 +2025-10-20 01:50:20.948 ( 13.766s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) +2025-10-20 01:50:20.948 ( 13.766s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) +2025-10-20 01:50:20.953 ( 13.772s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2025-10-20 01:50:20.953 ( 13.772s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2025-10-20 01:50:20.965 ( 13.784s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices +2025-10-20 01:50:20.965 ( 13.784s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 +2025-10-20 01:50:20.966 ( 13.785s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 +2025-10-20 01:50:20.970 ( 13.788s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2025-10-20 01:50:20.970 ( 13.788s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2025-10-20 01:50:20.983 ( 13.802s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:20.984 ( 13.803s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:20.985 ( 13.803s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:20.985 ( 13.803s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:20.990 ( 13.809s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2025-10-20 01:50:20.991 ( 13.809s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2025-10-20 01:50:20.991 ( 13.809s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 +2025-10-20 01:50:20.991 ( 13.810s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:20.991 ( 13.810s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:20.991 ( 13.810s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 +2025-10-20 01:50:20.992 ( 13.810s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2025-10-20 01:50:20.992 ( 13.811s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53236x4 +2025-10-20 01:50:20.996 ( 13.815s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2025-10-20 01:50:20.996 ( 13.815s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2025-10-20 01:50:20.997 ( 13.816s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2025-10-20 01:50:20.997 ( 13.816s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:20.997 ( 13.816s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times -2024-09-15 17:24:29.745 ( 14.446s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 -2024-09-15 17:24:29.773 ( 14.474s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:29.773 ( 14.474s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:29.862 ( 14.564s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:29.863 ( 14.564s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:29.868 ( 14.569s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) -2024-09-15 17:24:29.868 ( 14.569s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. -2024-09-15 17:24:29.871 ( 14.572s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-09-15 17:24:29.871 ( 14.572s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53191x4 -2024-09-15 17:24:29.881 ( 14.582s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-09-15 17:24:29.881 ( 14.582s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-09-15 17:24:29.882 ( 14.583s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-09-15 17:24:29.882 ( 14.584s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:29.882 ( 14.584s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:29.884 ( 14.585s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-09-15 17:24:29.885 ( 14.586s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-09-15 17:24:29.885 ( 14.586s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) -2024-09-15 17:24:29.941 ( 14.642s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) -2024-09-15 17:24:29.941 ( 14.642s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (2,0) -2024-09-15 17:24:29.976 ( 14.677s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 458 to 1261 +2025-10-20 01:50:21.000 ( 13.819s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 +2025-10-20 01:50:21.013 ( 13.831s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:21.013 ( 13.832s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:21.105 ( 13.924s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:21.105 ( 13.924s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:21.107 ( 13.926s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) +2025-10-20 01:50:21.107 ( 13.926s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. +2025-10-20 01:50:21.109 ( 13.927s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2025-10-20 01:50:21.109 ( 13.928s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53236x4 +2025-10-20 01:50:21.113 ( 13.932s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2025-10-20 01:50:21.114 ( 13.932s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2025-10-20 01:50:21.114 ( 13.933s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2025-10-20 01:50:21.114 ( 13.933s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:21.114 ( 13.933s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:21.115 ( 13.934s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2025-10-20 01:50:21.115 ( 13.934s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2025-10-20 01:50:21.115 ( 13.934s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) +2025-10-20 01:50:21.134 ( 13.953s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) +2025-10-20 01:50:21.134 ( 13.953s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (2,0) +2025-10-20 01:50:21.153 ( 13.972s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 489 to 1285 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 @@ -3075,7 +3111,7 @@ Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- -2024-09-15 17:24:30.089 ( 14.790s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. +2025-10-20 01:50:21.199 ( 14.018s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero @@ -3121,41 +3157,41 @@ [MPI_MAX] Summary of timings | reps wall avg wall tot --------------------------------------------------------------------------------------------------------- -Build BoxMesh (tetrahedra) | 1 14.350000 14.350000 -Build dofmap data | 2 0.010000 0.020000 +Build BoxMesh (tetrahedra) | 1 13.730000 13.730000 +Build dofmap data | 2 0.000000 0.000000 Build sparsity | 1 0.010000 0.010000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 -Compute entities of dim = 2 | 1 0.130000 0.130000 -Compute graph partition (SCOTCH) | 1 14.080000 14.080000 -Compute local part of mesh dual graph | 2 0.080000 0.160000 -Compute local-to-local map | 1 0.000000 0.000000 -Compute non-local part of mesh dual graph | 1 0.000000 0.000000 +Compute entities of dim = 2 | 1 0.110000 0.110000 +Compute graph partition (SCOTCH) | 1 13.530000 13.530000 +Compute local part of mesh dual graph | 2 0.055000 0.110000 +Compute local-to-local map | 1 0.010000 0.010000 +Compute non-local part of mesh dual graph | 1 0.030000 0.030000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 -Distribute AdjacencyList nodes to destination ranks | 1 0.030000 0.030000 +Distribute AdjacencyList nodes to destination ranks | 1 0.020000 0.020000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 -GPS: create_level_structure | 2 0.002000 0.010000 +GPS: create_level_structure | 6 0.001667 0.010000 Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 -Init MPI | 1 0.150000 0.150000 +Init MPI | 1 0.090000 0.090000 Init PETSc | 1 0.000000 0.000000 -Init dofmap from element dofmap | 2 0.010000 0.020000 +Init dofmap from element dofmap | 2 0.000000 0.000000 Init logging | 1 0.000000 0.000000 -PETSc Krylov solver | 1 0.370000 0.370000 +PETSc Krylov solver | 1 0.170000 0.170000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 -SCOTCH: call SCOTCH_dgraphPart | 1 14.080000 14.080000 -SparsityPattern::finalize | 1 0.030000 0.030000 -Topology: create | 1 0.060000 0.060000 +SCOTCH: call SCOTCH_dgraphPart | 1 13.530000 13.530000 +SparsityPattern::finalize | 1 0.010000 0.010000 +Topology: create | 1 0.050000 0.050000 Topology: determine shared index ownership | 1 0.010000 0.010000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 -ZZZ Assemble | 1 0.210000 0.210000 -ZZZ Assemble matrix | 1 0.090000 0.090000 -ZZZ Assemble vector | 1 0.020000 0.020000 -ZZZ Create Mesh | 1 14.350000 14.350000 -ZZZ Create RHS function | 1 0.050000 0.050000 -ZZZ Create boundary conditions | 1 0.010000 0.010000 -ZZZ Create facets and facet->cell connectivity | 1 0.130000 0.130000 -ZZZ FunctionSpace | 1 0.010000 0.010000 -ZZZ Solve | 1 0.370000 0.370000 +ZZZ Assemble | 1 0.080000 0.080000 +ZZZ Assemble matrix | 1 0.040000 0.040000 +ZZZ Assemble vector | 1 0.000000 0.000000 +ZZZ Create Mesh | 1 13.730000 13.730000 +ZZZ Create RHS function | 1 0.020000 0.020000 +ZZZ Create boundary conditions | 1 0.000000 0.000000 +ZZZ Create facets and facet->cell connectivity | 1 0.110000 0.110000 +ZZZ FunctionSpace | 1 0.000000 0.000000 +ZZZ Solve | 1 0.180000 0.180000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** @@ -3164,16 +3200,16 @@ ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ -/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named ionos1-amd64 with 3 processors, by pbuilder1 Sun Sep 15 17:24:30 2024 +/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processors, by pbuilder2 Mon Oct 20 01:50:21 2025 Using Petsc Release Version 3.20.6, Mar 29, 2024 Max Max/Min Avg Total -Time (sec): 1.507e+01 1.000 1.507e+01 +Time (sec): 1.410e+01 1.000 1.410e+01 Objects: 0.000e+00 0.000 0.000e+00 -Flops: 3.536e+06 1.027 3.489e+06 1.047e+07 -Flops/sec: 2.347e+05 1.027 2.316e+05 6.947e+05 +Flops: 3.566e+06 1.037 3.488e+06 1.047e+07 +Flops/sec: 2.529e+05 1.037 2.474e+05 7.422e+05 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 -MPI Msg Len (bytes): 1.810e+05 1.154 5.756e+03 5.180e+05 +MPI Msg Len (bytes): 1.896e+05 1.186 5.958e+03 5.362e+05 MPI Reductions: 7.000e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) @@ -3182,7 +3218,7 @@ Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total - 0: Main Stage: 1.5068e+01 100.0% 1.0467e+07 100.0% 9.000e+01 100.0% 5.756e+03 100.0% 5.200e+01 74.3% + 0: Main Stage: 1.4101e+01 100.0% 1.0465e+07 100.0% 9.000e+01 100.0% 5.958e+03 100.0% 5.200e+01 74.3% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. @@ -3206,32 +3242,32 @@ --- Event Stage 0: Main Stage -BuildTwoSided 5 1.0 9.9459e-03 91.4 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 10 0 -BuildTwoSidedF 2 1.0 9.9315e-03 97.1 0.00e+00 0.0 1.2e+01 2.1e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 -MatMult 7 1.0 5.8069e-03 1.0 1.94e+06 1.0 4.2e+01 5.5e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 987 -MatConvert 1 1.0 1.5923e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 -MatAssemblyBegin 5 1.0 1.2052e-02 5.4 0.00e+00 0.0 1.2e+01 2.1e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 -MatAssemblyEnd 5 1.0 6.4617e-03 1.2 3.60e+03 1.2 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 10 2 -MatGetRowIJ 4 1.0 3.0170e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatView 1 1.0 6.7672e-04 3.2 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 -MatSetPreallCOO 2 1.0 9.6703e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatSetValuesCOO 2 1.0 2.1811e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecTDot 16 1.0 5.8915e-04 1.3 3.22e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 23 0 9 0 0 31 1618 -VecNorm 8 1.0 1.1502e-03 3.0 1.61e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 414 -VecCopy 2 1.0 1.0534e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecSet 9 1.0 1.6763e-04 2.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecAXPY 14 1.0 3.6929e-04 1.5 2.81e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 2259 -VecAYPX 6 1.0 2.1522e-04 1.9 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 1661 -VecScatterBegin 7 1.0 2.7582e-04 1.5 0.00e+00 0.0 4.2e+01 5.5e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 -VecScatterEnd 7 1.0 1.8590e-03 5.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetGraph 3 1.0 5.7247e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetUp 3 1.0 2.0001e-04 1.0 0.00e+00 0.0 3.6e+01 8.0e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 -SFPack 7 1.0 5.2455e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFUnpack 7 1.0 3.6130e-06 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSetUp 1 1.0 1.2630e-04 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSolve 1 1.0 1.4728e-01 1.0 2.82e+06 1.0 4.2e+01 5.5e+03 2.4e+01 1 80 47 45 34 1 80 47 45 46 57 -PCSetUp 1 1.0 2.1819e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 1 0 0 0 3 1 0 0 0 4 0 -PCApply 8 1.0 1.3971e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 +BuildTwoSided 5 1.0 1.5267e-03 27.6 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 10 0 +BuildTwoSidedF 2 1.0 1.5187e-03 33.7 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 +MatMult 7 1.0 1.9324e-03 1.0 1.95e+06 1.0 4.2e+01 5.7e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 2965 +MatConvert 1 1.0 6.9115e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 +MatAssemblyBegin 5 1.0 2.9946e-03 1.8 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 +MatAssemblyEnd 5 1.0 2.9601e-03 1.0 3.81e+03 1.3 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 10 4 +MatGetRowIJ 4 1.0 5.0120e-06 4.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatView 1 1.0 3.7784e-04 3.1 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 +MatSetPreallCOO 2 1.0 3.9910e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatSetValuesCOO 2 1.0 7.6394e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecTDot 16 1.0 2.5003e-04 1.2 3.24e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 23 0 9 0 0 31 3813 +VecNorm 8 1.0 1.6206e-04 1.1 1.62e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 2941 +VecCopy 2 1.0 4.9654e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecSet 9 1.0 6.1502e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecAXPY 14 1.0 1.4770e-04 1.1 2.84e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 5648 +VecAYPX 6 1.0 9.9292e-05 1.1 1.22e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 3600 +VecScatterBegin 7 1.0 1.2647e-04 1.0 0.00e+00 0.0 4.2e+01 5.7e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 +VecScatterEnd 7 1.0 3.6116e-04 3.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetGraph 3 1.0 3.1882e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetUp 3 1.0 1.2510e-04 1.1 0.00e+00 0.0 3.6e+01 8.3e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 +SFPack 7 1.0 2.9785e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFUnpack 7 1.0 1.8580e-06 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSetUp 1 1.0 6.0429e-05 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSolve 1 1.0 5.5006e-02 1.0 2.84e+06 1.0 4.2e+01 5.7e+03 2.4e+01 0 80 47 45 34 0 80 47 45 46 152 +PCSetUp 1 1.0 1.2279e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 1 0 0 0 3 1 0 0 0 4 0 +PCApply 8 1.0 5.2248e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. @@ -3248,9 +3284,9 @@ Preconditioner 1 1 Viewer 1 1 ======================================================================================================================== -Average time to get PetscTime(): 7.56e-08 -Average time for MPI_Barrier(): 3.681e-06 -Average time for zero size MPI_Send(): 4.32933e-06 +Average time to get PetscTime(): 5.17e-08 +Average time for MPI_Barrier(): 1.5086e-06 +Average time for zero size MPI_Send(): 2.11867e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type poisson # (source: command line) @@ -3306,68 +3342,68 @@ Option left: name:--ndofs value: 10000 source: command line Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: weak source: command line -2024-09-15 17:24:30.524 ( 15.225s) [RANK: 0 ] loguru.cpp:526 INFO| atexit +2025-10-20 01:50:21.430 ( 14.249s) [RANK: 0 ] loguru.cpp:526 INFO| atexit ==== poisson strong scaling (3 processes with ndofs=30000) ==== -2024-09-15 17:24:31.142 ( 0.154s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks -2024-09-15 17:24:31.142 ( 0.155s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph -2024-09-15 17:24:31.142 ( 0.155s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-09-15 17:24:31.218 ( 0.230s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph -2024-09-15 17:24:31.219 ( 0.231s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:31.219 ( 0.231s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:31.219 ( 0.231s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 -2024-09-15 17:24:31.224 ( 0.236s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 210000, non-local: 1800) -2024-09-15 17:24:31.224 ( 0.236s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH -2024-09-15 17:24:45.530 ( 14.542s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-09-15 17:24:45.531 ( 14.543s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-09-15 17:24:45.546 ( 14.558s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-09-15 17:24:45.627 ( 14.639s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(161) 50203-3792 -2024-09-15 17:24:45.640 ( 14.653s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) -2024-09-15 17:24:45.640 ( 14.653s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) -2024-09-15 17:24:45.646 ( 14.658s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-09-15 17:24:45.646 ( 14.658s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-09-15 17:24:45.664 ( 14.676s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices -2024-09-15 17:24:45.664 ( 14.676s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 -2024-09-15 17:24:45.664 ( 14.676s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 -2024-09-15 17:24:45.670 ( 14.682s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-09-15 17:24:45.670 ( 14.682s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-09-15 17:24:45.689 ( 14.701s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:45.689 ( 14.701s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:45.689 ( 14.701s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:45.689 ( 14.701s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:45.695 ( 14.708s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-09-15 17:24:45.696 ( 14.708s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-09-15 17:24:45.696 ( 14.708s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 -2024-09-15 17:24:45.696 ( 14.708s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:45.696 ( 14.709s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:45.696 ( 14.709s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 -2024-09-15 17:24:45.697 ( 14.709s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-09-15 17:24:45.697 ( 14.710s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53410x4 -2024-09-15 17:24:45.706 ( 14.719s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-09-15 17:24:45.707 ( 14.719s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-09-15 17:24:45.708 ( 14.720s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-09-15 17:24:45.708 ( 14.720s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:45.708 ( 14.720s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:21.954 ( 0.086s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks +2025-10-20 01:50:21.955 ( 0.086s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph +2025-10-20 01:50:21.955 ( 0.086s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2025-10-20 01:50:22.019 ( 0.150s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph +2025-10-20 01:50:22.019 ( 0.151s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:22.019 ( 0.151s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:22.019 ( 0.151s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 +2025-10-20 01:50:22.023 ( 0.155s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 210000, non-local: 1800) +2025-10-20 01:50:22.023 ( 0.155s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH +2025-10-20 01:50:35.697 ( 13.829s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2025-10-20 01:50:35.698 ( 13.830s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2025-10-20 01:50:35.703 ( 13.835s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2025-10-20 01:50:35.743 ( 13.875s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(165) 51345-3678 +2025-10-20 01:50:35.750 ( 13.881s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) +2025-10-20 01:50:35.750 ( 13.882s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) +2025-10-20 01:50:35.760 ( 13.892s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2025-10-20 01:50:35.760 ( 13.892s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2025-10-20 01:50:35.772 ( 13.904s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices +2025-10-20 01:50:35.772 ( 13.904s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 +2025-10-20 01:50:35.773 ( 13.905s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 +2025-10-20 01:50:35.777 ( 13.908s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2025-10-20 01:50:35.777 ( 13.908s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2025-10-20 01:50:35.790 ( 13.922s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:35.790 ( 13.922s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:35.790 ( 13.922s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:35.791 ( 13.922s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:35.797 ( 13.928s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2025-10-20 01:50:35.797 ( 13.928s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2025-10-20 01:50:35.797 ( 13.928s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 +2025-10-20 01:50:35.797 ( 13.929s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:35.797 ( 13.929s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:35.797 ( 13.929s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 +2025-10-20 01:50:35.798 ( 13.929s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2025-10-20 01:50:35.798 ( 13.929s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53192x4 +2025-10-20 01:50:35.802 ( 13.934s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2025-10-20 01:50:35.802 ( 13.934s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2025-10-20 01:50:35.803 ( 13.934s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2025-10-20 01:50:35.803 ( 13.935s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:35.803 ( 13.935s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times -2024-09-15 17:24:45.713 ( 14.725s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 -2024-09-15 17:24:45.741 ( 14.753s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:45.741 ( 14.753s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:45.833 ( 14.846s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:45.834 ( 14.846s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:45.839 ( 14.851s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) -2024-09-15 17:24:45.839 ( 14.851s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. -2024-09-15 17:24:45.842 ( 14.854s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-09-15 17:24:45.842 ( 14.854s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53410x4 -2024-09-15 17:24:45.851 ( 14.863s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-09-15 17:24:45.851 ( 14.863s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-09-15 17:24:45.852 ( 14.864s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-09-15 17:24:45.853 ( 14.865s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-09-15 17:24:45.853 ( 14.865s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-09-15 17:24:45.854 ( 14.866s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-09-15 17:24:45.855 ( 14.867s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-09-15 17:24:45.855 ( 14.867s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) -2024-09-15 17:24:45.916 ( 14.928s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) -2024-09-15 17:24:45.916 ( 14.928s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (2,0) -2024-09-15 17:24:45.953 ( 14.965s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 465 to 1286 +2025-10-20 01:50:35.805 ( 13.937s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 +2025-10-20 01:50:35.818 ( 13.950s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:35.819 ( 13.950s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:35.912 ( 14.043s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:35.912 ( 14.043s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:35.914 ( 14.046s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) +2025-10-20 01:50:35.914 ( 14.046s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. +2025-10-20 01:50:35.916 ( 14.047s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2025-10-20 01:50:35.916 ( 14.047s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53192x4 +2025-10-20 01:50:35.920 ( 14.052s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2025-10-20 01:50:35.920 ( 14.052s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2025-10-20 01:50:35.921 ( 14.052s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2025-10-20 01:50:35.921 ( 14.053s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2025-10-20 01:50:35.921 ( 14.053s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2025-10-20 01:50:35.922 ( 14.053s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2025-10-20 01:50:35.922 ( 14.054s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2025-10-20 01:50:35.922 ( 14.054s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) +2025-10-20 01:50:35.942 ( 14.074s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) +2025-10-20 01:50:35.942 ( 14.074s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (2,0) +2025-10-20 01:50:35.960 ( 14.092s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 436 to 1214 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 @@ -3381,7 +3417,7 @@ Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- -2024-09-15 17:24:46.072 ( 15.084s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. +2025-10-20 01:50:36.015 ( 14.147s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero @@ -3427,41 +3463,41 @@ [MPI_MAX] Summary of timings | reps wall avg wall tot --------------------------------------------------------------------------------------------------------- -Build BoxMesh (tetrahedra) | 1 14.570000 14.570000 +Build BoxMesh (tetrahedra) | 1 13.850000 13.850000 Build dofmap data | 2 0.010000 0.020000 -Build sparsity | 1 0.020000 0.020000 +Build sparsity | 1 0.010000 0.010000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 -Compute entities of dim = 2 | 1 0.130000 0.130000 -Compute graph partition (SCOTCH) | 1 14.280000 14.280000 -Compute local part of mesh dual graph | 2 0.075000 0.150000 +Compute entities of dim = 2 | 1 0.110000 0.110000 +Compute graph partition (SCOTCH) | 1 13.650000 13.650000 +Compute local part of mesh dual graph | 2 0.050000 0.100000 Compute local-to-local map | 1 0.000000 0.000000 -Compute non-local part of mesh dual graph | 1 0.000000 0.000000 +Compute non-local part of mesh dual graph | 1 0.030000 0.030000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 -Distribute AdjacencyList nodes to destination ranks | 1 0.060000 0.060000 +Distribute AdjacencyList nodes to destination ranks | 1 0.030000 0.030000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 -GPS: create_level_structure | 2 0.005000 0.010000 -Gibbs-Poole-Stockmeyer ordering | 1 0.020000 0.020000 -Init MPI | 1 0.150000 0.150000 -Init PETSc | 1 0.000000 0.000000 +GPS: create_level_structure | 2 0.003333 0.010000 +Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 +Init MPI | 1 0.110000 0.110000 +Init PETSc | 1 0.010000 0.010000 Init dofmap from element dofmap | 2 0.010000 0.020000 Init logging | 1 0.000000 0.000000 -PETSc Krylov solver | 1 0.360000 0.360000 +PETSc Krylov solver | 1 0.220000 0.220000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 -SCOTCH: call SCOTCH_dgraphPart | 1 14.270000 14.270000 -SparsityPattern::finalize | 1 0.030000 0.030000 -Topology: create | 1 0.060000 0.060000 +SCOTCH: call SCOTCH_dgraphPart | 1 13.650000 13.650000 +SparsityPattern::finalize | 1 0.010000 0.010000 +Topology: create | 1 0.040000 0.040000 Topology: determine shared index ownership | 1 0.010000 0.010000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 -ZZZ Assemble | 1 0.210000 0.210000 -ZZZ Assemble matrix | 1 0.090000 0.090000 -ZZZ Assemble vector | 1 0.020000 0.020000 -ZZZ Create Mesh | 1 14.570000 14.570000 -ZZZ Create RHS function | 1 0.060000 0.060000 +ZZZ Assemble | 1 0.090000 0.090000 +ZZZ Assemble matrix | 1 0.040000 0.040000 +ZZZ Assemble vector | 1 0.010000 0.010000 +ZZZ Create Mesh | 1 13.850000 13.850000 +ZZZ Create RHS function | 1 0.020000 0.020000 ZZZ Create boundary conditions | 1 0.000000 0.000000 -ZZZ Create facets and facet->cell connectivity | 1 0.130000 0.130000 -ZZZ FunctionSpace | 1 0.020000 0.020000 -ZZZ Solve | 1 0.360000 0.360000 +ZZZ Create facets and facet->cell connectivity | 1 0.110000 0.110000 +ZZZ FunctionSpace | 1 0.010000 0.010000 +ZZZ Solve | 1 0.220000 0.220000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** @@ -3470,16 +3506,16 @@ ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ -/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named ionos1-amd64 with 3 processors, by pbuilder1 Sun Sep 15 17:24:46 2024 +/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processors, by pbuilder2 Mon Oct 20 01:50:36 2025 Using Petsc Release Version 3.20.6, Mar 29, 2024 Max Max/Min Avg Total -Time (sec): 1.529e+01 1.000 1.529e+01 +Time (sec): 1.429e+01 1.000 1.429e+01 Objects: 0.000e+00 0.000 0.000e+00 -Flops: 3.530e+06 1.021 3.489e+06 1.047e+07 -Flops/sec: 2.309e+05 1.021 2.281e+05 6.844e+05 +Flops: 3.553e+06 1.029 3.489e+06 1.047e+07 +Flops/sec: 2.487e+05 1.029 2.443e+05 7.328e+05 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 -MPI Msg Len (bytes): 1.893e+05 1.186 5.909e+03 5.318e+05 +MPI Msg Len (bytes): 1.876e+05 1.235 5.713e+03 5.141e+05 MPI Reductions: 7.000e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) @@ -3488,7 +3524,7 @@ Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total - 0: Main Stage: 1.5291e+01 100.0% 1.0466e+07 100.0% 9.000e+01 100.0% 5.909e+03 100.0% 5.200e+01 74.3% + 0: Main Stage: 1.4286e+01 100.0% 1.0468e+07 100.0% 9.000e+01 100.0% 5.713e+03 100.0% 5.200e+01 74.3% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. @@ -3512,32 +3548,32 @@ --- Event Stage 0: Main Stage -BuildTwoSided 5 1.0 1.2613e-02 127.7 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 10 0 -BuildTwoSidedF 2 1.0 1.2528e-02 124.7 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 -MatMult 7 1.0 5.3888e-03 1.0 1.93e+06 1.0 4.2e+01 5.7e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 1063 -MatConvert 1 1.0 1.5770e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 -MatAssemblyBegin 5 1.0 1.4877e-02 6.8 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 -MatAssemblyEnd 5 1.0 6.3415e-03 1.2 3.73e+03 1.2 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 10 2 -MatGetRowIJ 4 1.0 2.8900e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatView 1 1.0 6.2489e-04 5.5 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 -MatSetPreallCOO 2 1.0 9.5481e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatSetValuesCOO 2 1.0 2.0402e-03 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecTDot 16 1.0 5.5750e-04 1.2 3.21e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 23 0 9 0 0 31 1710 -VecNorm 8 1.0 1.3248e-03 3.2 1.61e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 360 -VecCopy 2 1.0 9.2084e-05 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecSet 9 1.0 1.2595e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecAXPY 14 1.0 3.2333e-04 1.2 2.81e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 2580 -VecAYPX 6 1.0 2.1253e-04 1.3 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 1682 -VecScatterBegin 7 1.0 2.3011e-04 1.2 0.00e+00 0.0 4.2e+01 5.7e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 -VecScatterEnd 7 1.0 1.7126e-03 6.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetGraph 3 1.0 6.0860e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetUp 3 1.0 3.1411e-04 1.2 0.00e+00 0.0 3.6e+01 8.2e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 -SFPack 7 1.0 6.3869e-05 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFUnpack 7 1.0 6.1510e-06 1.9 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSetUp 1 1.0 1.2084e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSolve 1 1.0 1.4043e-01 1.0 2.82e+06 1.0 4.2e+01 5.7e+03 2.4e+01 1 80 47 45 34 1 80 47 45 46 59 -PCSetUp 1 1.0 2.1260e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 1 0 0 0 3 1 0 0 0 4 0 -PCApply 8 1.0 1.3336e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 +BuildTwoSided 5 1.0 5.5678e-03 66.8 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 10 0 +BuildTwoSidedF 2 1.0 5.5395e-03 53.9 0.00e+00 0.0 1.2e+01 2.1e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 +MatMult 7 1.0 1.9187e-03 1.0 1.95e+06 1.0 4.2e+01 5.5e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 2986 +MatConvert 1 1.0 6.7465e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 +MatAssemblyBegin 5 1.0 6.8418e-03 3.9 0.00e+00 0.0 1.2e+01 2.1e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 +MatAssemblyEnd 5 1.0 3.0176e-03 1.0 3.78e+03 1.2 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 10 3 +MatGetRowIJ 4 1.0 1.2410e-06 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatView 1 1.0 4.2444e-04 4.3 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 +MatSetPreallCOO 2 1.0 3.9683e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatSetValuesCOO 2 1.0 7.4305e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecTDot 16 1.0 2.6342e-04 1.2 3.23e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 23 0 9 0 0 31 3619 +VecNorm 8 1.0 2.7548e-04 1.8 1.62e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 1730 +VecCopy 2 1.0 5.9908e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecSet 9 1.0 6.0215e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecAXPY 14 1.0 1.4106e-04 1.6 2.83e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 5914 +VecAYPX 6 1.0 8.8912e-05 1.7 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 4021 +VecScatterBegin 7 1.0 1.2817e-04 1.2 0.00e+00 0.0 4.2e+01 5.5e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 +VecScatterEnd 7 1.0 4.3975e-04 2.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetGraph 3 1.0 3.1742e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetUp 3 1.0 1.4587e-04 1.1 0.00e+00 0.0 3.6e+01 8.0e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 +SFPack 7 1.0 2.8821e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFUnpack 7 1.0 1.9340e-06 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSetUp 1 1.0 6.3823e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSolve 1 1.0 6.5078e-02 1.0 2.84e+06 1.0 4.2e+01 5.5e+03 2.4e+01 0 80 47 45 34 0 80 47 45 46 128 +PCSetUp 1 1.0 1.5187e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 1 0 0 0 3 1 0 0 0 4 0 +PCApply 8 1.0 6.2343e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. @@ -3554,9 +3590,9 @@ Preconditioner 1 1 Viewer 1 1 ======================================================================================================================== -Average time to get PetscTime(): 7.43e-08 -Average time for MPI_Barrier(): 4.2278e-06 -Average time for zero size MPI_Send(): 3.71967e-06 +Average time to get PetscTime(): 5.08e-08 +Average time for MPI_Barrier(): 2.5072e-06 +Average time for zero size MPI_Send(): 2.62367e-06 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type poisson # (source: command line) @@ -3612,13 +3648,13 @@ Option left: name:--ndofs value: 30000 source: command line Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: strong source: command line -2024-09-15 17:24:46.491 ( 15.503s) [RANK: 0 ] loguru.cpp:526 INFO| atexit +2025-10-20 01:50:36.286 ( 14.418s) [RANK: 0 ] loguru.cpp:526 INFO| atexit make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake -O--sourcedirectory=src dh_prep -O--buildsystem=cmake -O--sourcedirectory=src dh_auto_install -O--buildsystem=cmake -O--sourcedirectory=src - cd obj-x86_64-linux-gnu && make -j20 install DESTDIR=/build/reproducible-path/fenicsx-performance-tests-0.8.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/fenicsx-performance-tests-0.8.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -3659,12 +3695,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3791/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3791/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/190417 and its subdirectories -I: Current time: Sun Sep 15 17:25:03 -12 2024 -I: pbuilder-time-stamp: 1726464303 +I: removing directory /srv/workspace/pbuilder/3791 and its subdirectories +I: Current time: Mon Oct 20 01:50:52 +14 2025 +I: pbuilder-time-stamp: 1760874652