Diff of the two buildlogs: -- --- b1/build.log 2024-12-06 06:33:31.830594642 +0000 +++ b2/build.log 2024-12-06 06:34:55.254839223 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Jan 8 00:55:07 -12 2026 -I: pbuilder-time-stamp: 1767876907 +I: Current time: Fri Dec 6 20:33:34 +14 2024 +I: pbuilder-time-stamp: 1733466814 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -28,51 +28,83 @@ dpkg-source: info: unpacking dcm2niix_1.0.20240202-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3605670/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1490594/tmp/hooks/D01_modify_environment starting +debug: Running on infom01-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 6 06:33 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1490594/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1490594/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='855a3b997948497196a84af283c75a8c' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3605670' - PS1='# ' - PS2='> ' + INVOCATION_ID=7fad76d6a63042c6ba6d536479601629 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1490594 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JJg9EVui/pbuilderrc_phTK --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JJg9EVui/b1 --logfile b1/build.log dcm2niix_1.0.20240202-1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JJg9EVui/pbuilderrc_f8H3 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JJg9EVui/b2 --logfile b2/build.log dcm2niix_1.0.20240202-1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom02-amd64 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3605670/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1490594/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -236,7 +268,7 @@ Get: 113 http://deb.debian.org/debian trixie/main amd64 sphinx-common all 7.4.7-4 [731 kB] Get: 114 http://deb.debian.org/debian trixie/main amd64 python3-sphinx all 7.4.7-4 [588 kB] Get: 115 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] -Fetched 57.8 MB in 1s (92.9 MB/s) +Fetched 57.8 MB in 1s (110 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19968 files and directories currently installed.) @@ -624,8 +656,8 @@ Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Jan 8 12:55:57 UTC 2026. -Universal Time is now: Thu Jan 8 12:55:57 UTC 2026. +Local time is now: Fri Dec 6 06:34:21 UTC 2024. +Universal Time is now: Fri Dec 6 06:34:21 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libturbojpeg0-dev:amd64 (1:2.1.5-3+b1) ... @@ -735,7 +767,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/dcm2niix-1.0.20240202/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dcm2niix_1.0.20240202-1_source.changes +I: user script /srv/workspace/pbuilder/1490594/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/1490594/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/dcm2niix-1.0.20240202/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dcm2niix_1.0.20240202-1_source.changes dpkg-buildpackage: info: source package dcm2niix dpkg-buildpackage: info: source version 1.0.20240202-1 dpkg-buildpackage: info: source distribution unstable @@ -882,7 +918,7 @@ "/usr/lib/x86_64-linux-gnu/openjpeg-2.1/OpenJPEGTargets.cmake" but not all the files it references. --- Configuring done (0.9s) +-- Configuring done (0.5s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -915,43 +951,43 @@ make[4]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-x86_64-linux-gnu' cd /build/reproducible-path/dcm2niix-1.0.20240202/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/dcm2niix-1.0.20240202/console /build/reproducible-path/dcm2niix-1.0.20240202/console /build/reproducible-path/dcm2niix-1.0.20240202/obj-x86_64-linux-gnu /build/reproducible-path/dcm2niix-1.0.20240202/obj-x86_64-linux-gnu /build/reproducible-path/dcm2niix-1.0.20240202/obj-x86_64-linux-gnu/CMakeFiles/dcm2niibatch.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-x86_64-linux-gnu' -make -f CMakeFiles/dcm2niix.dir/build.make CMakeFiles/dcm2niix.dir/build make[4]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-x86_64-linux-gnu' make -f CMakeFiles/dcm2niibatch.dir/build.make CMakeFiles/dcm2niibatch.dir/build +make -f CMakeFiles/dcm2niix.dir/build.make CMakeFiles/dcm2niix.dir/build make[4]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-x86_64-linux-gnu' -[ 9%] Building CXX object CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o -[ 9%] Building CXX object CMakeFiles/dcm2niix.dir/ujpeg.cpp.o -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/ujpeg.cpp.o -MF CMakeFiles/dcm2niix.dir/ujpeg.cpp.o.d -o CMakeFiles/dcm2niix.dir/ujpeg.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/ujpeg.cpp +[ 4%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o +[ 13%] Building CXX object CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o +[ 13%] Building CXX object CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o +[ 18%] Building CXX object CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o +[ 22%] Building CXX object CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o +[ 27%] Building CXX object CMakeFiles/dcm2niix.dir/ujpeg.cpp.o +[ 31%] Building CXX object CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o -MF CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/main_console_batch.cpp -[ 18%] Building CXX object CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o -[ 18%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o -[ 22%] Building CXX object CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o -[ 31%] Building CXX object CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_foreign.cpp -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o -MF CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o -MF CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o.d -o CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nifti1_io_core.cpp -[ 31%] Building CXX object CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o -[ 36%] Building CXX object CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o -[ 40%] Building CXX object CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o -[ 50%] Building CXX object CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o -[ 54%] Building CXX object CMakeFiles/dcm2niix.dir/main_console.cpp.o -[ 54%] Building CXX object CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o -MF CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o.d -o CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp +[ 36%] Building CXX object CMakeFiles/dcm2niix.dir/main_console.cpp.o +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse 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/usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_ortho.cpp +[ 40%] Building CXX object CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o +[ 45%] Building CXX object CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 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/usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o -MF CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/ujpeg.cpp -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o -MF CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o.d -o CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp +[ 50%] Building CXX object CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/ujpeg.cpp.o -MF CMakeFiles/dcm2niix.dir/ujpeg.cpp.o.d -o CMakeFiles/dcm2niix.dir/ujpeg.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/ujpeg.cpp +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o -MF CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o.d -o CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nifti1_io_core.cpp +[ 54%] Building CXX object CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:186: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:260: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:262: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:267: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_foreign.cpp /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:186: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:260: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:262: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:267: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_ortho.cpp /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp: In function 'unsigned char* decode_JPEG_SOF_0XC3(const char*, int, bool, int*, int*, int*, int*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:135:29: warning: variable 'btS2' set but not used [-Wunused-but-set-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:135:35: warning: variable 'SOSse' set but not used [-Wunused-but-set-variable] @@ -960,16 +996,26 @@ /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:135:35: warning: variable 'SOSse' set but not used [-Wunused-but-set-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp: In function 'unsigned char* nii_loadImgCoreOpenJPEG(char*, nifti_1_header, TDICOMdata, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp:229:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare] -[ 59%] Building CXX object CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp: In function 'unsigned char* nii_loadImgCoreOpenJPEG(char*, nifti_1_header, TDICOMdata, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp:229:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare] +[ 59%] Building CXX object CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o +[ 63%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_foreign.cpp +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp +[ 68%] Building CXX object CMakeFiles/dcm2niix.dir/cJSON.cpp.o +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/cJSON.cpp.o -MF CMakeFiles/dcm2niix.dir/cJSON.cpp.o.d -o CMakeFiles/dcm2niix.dir/cJSON.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/cJSON.cpp +[ 72%] Building CXX object CMakeFiles/dcm2niix.dir/base64.cpp.o In file included from /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:22: /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:3805: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:3808: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:4684: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] -[ 63%] Building CXX object CMakeFiles/dcm2niix.dir/cJSON.cpp.o -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/cJSON.cpp.o -MF CMakeFiles/dcm2niix.dir/cJSON.cpp.o.d -o CMakeFiles/dcm2niix.dir/cJSON.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/cJSON.cpp +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/base64.cpp.o -MF CMakeFiles/dcm2niix.dir/base64.cpp.o.d -o CMakeFiles/dcm2niix.dir/base64.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/base64.cpp +[ 77%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_ortho.cpp +[ 81%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp +[ 86%] Building CXX object CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o -MF CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/cJSON.cpp /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'tinfl_status tinfl_decompress(tinfl_decompressor*, const mz_uint8*, size_t*, mz_uint8*, mz_uint8*, size_t*, mz_uint32)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1506:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1506:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' @@ -1000,7 +1046,6 @@ /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1999:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2000:21: note: in expansion of macro 'TDEFL_PUT_BITS' -[ 68%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2000:21: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'void tdefl_start_static_block(tdefl_compressor*)': @@ -1008,7 +1053,6 @@ /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2019:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2019:3: note: in expansion of macro 'TDEFL_PUT_BITS' -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_foreign.cpp /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'mz_bool tdefl_compress_lz_codes(tdefl_compressor*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2104:5: note: in expansion of macro 'TDEFL_PUT_BITS' @@ -1067,24 +1111,21 @@ /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:141: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:141: note: in expansion of macro 'TDEFL_PUT_BITS' -/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'void tdefl_find_match(tdefl_compressor*, mz_uint, mz_uint, mz_uint, mz_uint*, mz_uint*)': -/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2290:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] -[ 72%] Building CXX object CMakeFiles/dcm2niix.dir/base64.cpp.o -/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2290:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/base64.cpp.o -MF CMakeFiles/dcm2niix.dir/base64.cpp.o.d -o CMakeFiles/dcm2niix.dir/base64.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/base64.cpp -[ 77%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_ortho.cpp -[ 81%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp -[ 86%] Building CXX object CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o -MF CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/cJSON.cpp In file included from /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:22: /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:3805: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:3808: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] +/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'void tdefl_find_match(tdefl_compressor*, mz_uint, mz_uint, mz_uint, mz_uint*, mz_uint*)': +/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2290:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] +/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2290:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:4684: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] +[ 90%] Building CXX object CMakeFiles/dcm2niibatch.dir/base64.cpp.o +/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/base64.cpp.o -MF CMakeFiles/dcm2niibatch.dir/base64.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/base64.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/base64.cpp /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void siemensCsaAscii(const char*, TCsaAscii*, int, int, float*, char*, char*, char*, char*, char*, char*, char*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:952:36: note: in expansion of macro 'min' +/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'tinfl_status tinfl_decompress(tinfl_decompressor*, const mz_uint8*, size_t*, mz_uint8*, mz_uint8*, size_t*, mz_uint32)': +/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1506:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation] +/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1506:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void nii_SaveBIDSX(char*, TDICOMdata, TDCMopts, nifti_1_header*, const char*, TDTI4D*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:2233:28: note: in expansion of macro 'max' @@ -1110,16 +1151,6 @@ /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void createDummyBidsBoilerplate(char*, bool)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3342:17: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3344:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' -/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'tinfl_status tinfl_decompress(tinfl_decompressor*, const mz_uint8*, size_t*, mz_uint8*, mz_uint8*, size_t*, mz_uint32)': -/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1506:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation] -/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1506:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_saveMGH(char*, nifti_1_header, unsigned char*, TDCMopts, TDICOMdata, TDTI4D*, int)': -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4179:23: note: in expansion of macro 'max' -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void write_ubjsonint(void*, int, int, FILE*)': -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4619:14: warning: the address of 'bool littleEndianPlatform()' will never be NULL [-Waddress] -In file included from /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:31: -/build/reproducible-path/dcm2niix-1.0.20240202/console/nifti1_io_core.h:59:6: note: 'bool littleEndianPlatform()' declared here /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'void tdefl_start_dynamic_block(tdefl_compressor*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1987:3: note: in expansion of macro 'TDEFL_PUT_BITS' @@ -1154,8 +1185,6 @@ /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2019:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2019:3: note: in expansion of macro 'TDEFL_PUT_BITS' -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_savejnii(char*, nifti_1_header, unsigned char*, TDCMopts, TDICOMdata, TDTI4D*, int)': -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4926:22: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'mz_bool tdefl_compress_lz_codes(tdefl_compressor*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2104:5: note: in expansion of macro 'TDEFL_PUT_BITS' @@ -1165,7 +1194,6 @@ /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2109:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2109:3: note: in expansion of macro 'TDEFL_PUT_BITS' -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4978:22: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'int tdefl_flush_block(tdefl_compressor*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2188:5: note: in expansion of macro 'TDEFL_PUT_BITS' @@ -1215,7 +1243,19 @@ /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:141: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:141: note: in expansion of macro 'TDEFL_PUT_BITS' -[ 90%] Building CXX object CMakeFiles/dcm2niibatch.dir/base64.cpp.o +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_saveMGH(char*, nifti_1_header, unsigned char*, TDCMopts, TDICOMdata, TDTI4D*, int)': +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4179:23: note: in expansion of macro 'max' +/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'void tdefl_find_match(tdefl_compressor*, mz_uint, mz_uint, mz_uint, mz_uint*, mz_uint*)': +/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2290:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] +/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2290:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void write_ubjsonint(void*, int, int, FILE*)': +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4619:14: warning: the address of 'bool littleEndianPlatform()' will never be NULL [-Waddress] +In file included from /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:31: +/build/reproducible-path/dcm2niix-1.0.20240202/console/nifti1_io_core.h:59:6: note: 'bool littleEndianPlatform()' declared here +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_savejnii(char*, nifti_1_header, unsigned char*, TDCMopts, TDICOMdata, TDTI4D*, int)': +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4926:22: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4978:22: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void removeSclSlopeInter(nifti_1_header*, unsigned char*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:5115:30: note: in expansion of macro 'min' @@ -1225,10 +1265,6 @@ /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:5136:30: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:5137:30: note: in expansion of macro 'max' -/usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -msse2 -mfpmath=sse -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/base64.cpp.o -MF CMakeFiles/dcm2niibatch.dir/base64.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/base64.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/base64.cpp -/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'void tdefl_find_match(tdefl_compressor*, mz_uint, mz_uint, mz_uint, mz_uint*, mz_uint*)': -/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2290:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] -/build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2290:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void sliceTimingXA(TDCMsort*, TDICOMdata*, nifti_1_header*, int, const char*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6238:22: note: in expansion of macro 'min' @@ -1248,6 +1284,9 @@ /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7124:19: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7127:34: note: in expansion of macro 'max' +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void siemensCsaAscii(const char*, TCsaAscii*, int, int, float*, char*, char*, char*, char*, char*, char*, char*)': +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:952:36: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int saveDcm2NiiCore(int, TDCMsort*, TDICOMdata*, TSearchList*, TDCMopts, TDTI4D*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7724:57: note: in expansion of macro 'min' @@ -1256,17 +1295,14 @@ /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7731:81: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:8163:31: warning: unused variable 'shearMat' [-Wunused-variable] -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_loadDirCore(char*, TDCMopts*)': -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:9256:35: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void siemensCsaAscii(const char*, TCsaAscii*, int, int, float*, char*, char*, char*, char*, char*, char*, char*)': -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] -/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:952:36: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void nii_SaveBIDSX(char*, TDICOMdata, TDCMopts, nifti_1_header*, const char*, TDTI4D*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:2233:28: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'bool ensureSequentialSlicePositions(int, int, TDCMsort*, TDICOMdata*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3059:26: note: in expansion of macro 'min' +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_loadDirCore(char*, TDCMopts*)': +/build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:9256:35: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3060:26: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] @@ -1444,12 +1480,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1490594/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1490594/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3605670 and its subdirectories -I: Current time: Thu Jan 8 00:56:31 -12 2026 -I: pbuilder-time-stamp: 1767876991 +I: removing directory /srv/workspace/pbuilder/1490594 and its subdirectories +I: Current time: Fri Dec 6 20:34:54 +14 2024 +I: pbuilder-time-stamp: 1733466894