Diff of the two buildlogs: -- --- b1/build.log 2024-05-02 13:53:50.882553374 +0000 +++ b2/build.log 2024-05-02 13:55:09.431206761 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Jun 4 08:14:32 -12 2025 -I: pbuilder-time-stamp: 1749068072 +I: Current time: Fri May 3 03:53:53 +14 2024 +I: pbuilder-time-stamp: 1714658033 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -32,51 +32,83 @@ dpkg-source: info: applying 0006-relative-path-in-test-script.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2224535/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/4053521/tmp/hooks/D01_modify_environment starting +debug: Running on infom01-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 2 13:54 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/4053521/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/4053521/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='7990297bd730495b8a88a5a7823c795c' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2224535' - PS1='# ' - PS2='> ' + INVOCATION_ID=c5f833dde0ee432db91cd4e89aa2f3cd + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=4053521 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zx4w4fi2/pbuilderrc_k6Lc --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zx4w4fi2/b1 --logfile b1/build.log dawg_1.2-4.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zx4w4fi2/pbuilderrc_c7K8 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zx4w4fi2/b2 --logfile b2/build.log dawg_1.2-4.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom02-amd64 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-20-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 24 13:34 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2224535/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Apr 23 11:24 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/4053521/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -207,7 +239,7 @@ Get: 49 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 50 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.15.3 [901 kB] -Fetched 38.7 MB in 1s (56.6 MB/s) +Fetched 38.7 MB in 0s (107 MB/s) debconf: delaying package configuration, since apt-utils is not installed dpkg: libssl3:amd64: dependency problems, but removing anyway as you requested: libkrb5-3:amd64 depends on libssl3 (>= 3.0.0). @@ -434,7 +466,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/dawg-1.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dawg_1.2-4_source.changes +I: user script /srv/workspace/pbuilder/4053521/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/4053521/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/dawg-1.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dawg_1.2-4_source.changes dpkg-buildpackage: info: source package dawg dpkg-buildpackage: info: source version 1.2-4 dpkg-buildpackage: info: source distribution unstable @@ -502,7 +538,7 @@ -- Looking for snprintf - found -- Looking for _snprintf -- Looking for _snprintf - not found --- Configuring done (6.0s) +-- Configuring done (2.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -529,43 +565,44 @@ make[2]: Entering directory '/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu' make -f src/CMakeFiles/dawg.dir/build.make src/CMakeFiles/dawg.dir/depend make[3]: Entering directory '/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu' -[ 7%] Generating parser.tab.cpp, parser.tab.hpp -[ 15%] Generating lex.parser.cpp -cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/bison --name-prefix=parser --defines --output-file=/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src/parser.tab.cpp /build/reproducible-path/dawg-1.2/src/parser.ypp +[ 7%] Generating lex.parser.cpp +[ 15%] Generating parser.tab.cpp, parser.tab.hpp cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/flex -Pparser -o/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src/lex.parser.cpp /build/reproducible-path/dawg-1.2/src/parser.lpp +cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/bison --name-prefix=parser --defines --output-file=/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src/parser.tab.cpp /build/reproducible-path/dawg-1.2/src/parser.ypp cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/dawg-1.2 /build/reproducible-path/dawg-1.2/src /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src/CMakeFiles/dawg.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu' make -f src/CMakeFiles/dawg.dir/build.make src/CMakeFiles/dawg.dir/build make[3]: Entering directory '/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu' -[ 38%] Building CXX object src/CMakeFiles/dawg.dir/eigen.cpp.o -[ 46%] Building CXX object src/CMakeFiles/dawg.dir/output.cpp.o -[ 92%] Building CXX object src/CMakeFiles/dawg.dir/dawg.cpp.o -[ 92%] Building CXX object src/CMakeFiles/dawg.dir/indel.cpp.o -[ 92%] Building CXX object src/CMakeFiles/dawg.dir/parser.tab.cpp.o -[ 61%] Building CXX object src/CMakeFiles/dawg.dir/matrix.cpp.o -[ 92%] Building CXX object src/CMakeFiles/dawg.dir/lex.parser.cpp.o -[ 92%] Building CXX object src/CMakeFiles/dawg.dir/tree.cpp.o -[ 92%] Building CXX object src/CMakeFiles/dawg.dir/rand.cpp.o +[ 30%] Building CXX object src/CMakeFiles/dawg.dir/matrix.cpp.o +[ 30%] Building CXX object src/CMakeFiles/dawg.dir/dawg.cpp.o cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -MD -MT src/CMakeFiles/dawg.dir/dawg.cpp.o -MF CMakeFiles/dawg.dir/dawg.cpp.o.d -o CMakeFiles/dawg.dir/dawg.cpp.o -c /build/reproducible-path/dawg-1.2/src/dawg.cpp -[ 92%] Building CXX object src/CMakeFiles/dawg.dir/var.cpp.o +cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -MD -MT src/CMakeFiles/dawg.dir/matrix.cpp.o -MF CMakeFiles/dawg.dir/matrix.cpp.o.d -o CMakeFiles/dawg.dir/matrix.cpp.o -c /build/reproducible-path/dawg-1.2/src/matrix.cpp +[ 38%] Building CXX object src/CMakeFiles/dawg.dir/indel.cpp.o +[ 46%] Building CXX object src/CMakeFiles/dawg.dir/eigen.cpp.o +[ 61%] Building CXX object src/CMakeFiles/dawg.dir/tree.cpp.o +[ 61%] Building CXX object src/CMakeFiles/dawg.dir/lex.parser.cpp.o cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -MD -MT src/CMakeFiles/dawg.dir/eigen.cpp.o -MF CMakeFiles/dawg.dir/eigen.cpp.o.d -o CMakeFiles/dawg.dir/eigen.cpp.o -c /build/reproducible-path/dawg-1.2/src/eigen.cpp +[ 69%] Building CXX object src/CMakeFiles/dawg.dir/var.cpp.o cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -MD -MT src/CMakeFiles/dawg.dir/indel.cpp.o -MF CMakeFiles/dawg.dir/indel.cpp.o.d -o CMakeFiles/dawg.dir/indel.cpp.o -c /build/reproducible-path/dawg-1.2/src/indel.cpp -cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -MD -MT src/CMakeFiles/dawg.dir/matrix.cpp.o -MF CMakeFiles/dawg.dir/matrix.cpp.o.d -o CMakeFiles/dawg.dir/matrix.cpp.o -c /build/reproducible-path/dawg-1.2/src/matrix.cpp -cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -MD -MT src/CMakeFiles/dawg.dir/output.cpp.o -MF CMakeFiles/dawg.dir/output.cpp.o.d -o CMakeFiles/dawg.dir/output.cpp.o -c /build/reproducible-path/dawg-1.2/src/output.cpp -cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -MD -MT src/CMakeFiles/dawg.dir/rand.cpp.o -MF CMakeFiles/dawg.dir/rand.cpp.o.d -o CMakeFiles/dawg.dir/rand.cpp.o -c /build/reproducible-path/dawg-1.2/src/rand.cpp +[ 76%] Building CXX object src/CMakeFiles/dawg.dir/rand.cpp.o cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -MD -MT src/CMakeFiles/dawg.dir/tree.cpp.o -MF CMakeFiles/dawg.dir/tree.cpp.o.d -o CMakeFiles/dawg.dir/tree.cpp.o -c /build/reproducible-path/dawg-1.2/src/tree.cpp -cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -MD -MT src/CMakeFiles/dawg.dir/var.cpp.o -MF CMakeFiles/dawg.dir/var.cpp.o.d -o CMakeFiles/dawg.dir/var.cpp.o -c /build/reproducible-path/dawg-1.2/src/var.cpp cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -I "/build/reproducible-path/dawg-1.2/src" -MD -MT src/CMakeFiles/dawg.dir/lex.parser.cpp.o -MF CMakeFiles/dawg.dir/lex.parser.cpp.o.d -o CMakeFiles/dawg.dir/lex.parser.cpp.o -c /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src/lex.parser.cpp +cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -MD -MT src/CMakeFiles/dawg.dir/var.cpp.o -MF CMakeFiles/dawg.dir/var.cpp.o.d -o CMakeFiles/dawg.dir/var.cpp.o -c /build/reproducible-path/dawg-1.2/src/var.cpp +cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -MD -MT src/CMakeFiles/dawg.dir/rand.cpp.o -MF CMakeFiles/dawg.dir/rand.cpp.o.d -o CMakeFiles/dawg.dir/rand.cpp.o -c /build/reproducible-path/dawg-1.2/src/rand.cpp +[ 84%] Building CXX object src/CMakeFiles/dawg.dir/parser.tab.cpp.o +[ 92%] Building CXX object src/CMakeFiles/dawg.dir/output.cpp.o cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -I "/build/reproducible-path/dawg-1.2/src" -MD -MT src/CMakeFiles/dawg.dir/parser.tab.cpp.o -MF CMakeFiles/dawg.dir/parser.tab.cpp.o.d -o CMakeFiles/dawg.dir/parser.tab.cpp.o -c /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src/parser.tab.cpp +cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DHAVE_CONFIG_H -I/build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 "-DPACKAGE_STRING=\"dawg 1.2-release\"" "-DPACKAGE_BUGREPORT=\"reed@scit.us\"" -MD -MT src/CMakeFiles/dawg.dir/output.cpp.o -MF CMakeFiles/dawg.dir/output.cpp.o.d -o CMakeFiles/dawg.dir/output.cpp.o -c /build/reproducible-path/dawg-1.2/src/output.cpp In file included from /build/reproducible-path/dawg-1.2/src/tree.h:7, - from /build/reproducible-path/dawg-1.2/src/dawg.cpp:20: + from /build/reproducible-path/dawg-1.2/src/var.h:7, + from /build/reproducible-path/dawg-1.2/src/parser.lpp:5: /build/reproducible-path/dawg-1.2/src/indel.h:72:32: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 72 | class LinearFunc : public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/dawg-1.2/src/dawg.h:42, - from /build/reproducible-path/dawg-1.2/src/dawg.cpp:19: + from /build/reproducible-path/dawg-1.2/src/parser.lpp:4: /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ @@ -584,14 +621,15 @@ 65 | template class auto_ptr; | ^~~~~~~~ In file included from /build/reproducible-path/dawg-1.2/src/tree.h:7, - from /build/reproducible-path/dawg-1.2/src/tree.cpp:4: + from /build/reproducible-path/dawg-1.2/src/var.h:7, + from /build/reproducible-path/dawg-1.2/src/var.cpp:4: /build/reproducible-path/dawg-1.2/src/indel.h:72:32: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 72 | class LinearFunc : public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/dawg-1.2/src/dawg.h:42, - from /build/reproducible-path/dawg-1.2/src/tree.cpp:3: + from /build/reproducible-path/dawg-1.2/src/var.cpp:3: /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ @@ -609,70 +647,50 @@ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ -In file included from /build/reproducible-path/dawg-1.2/src/tree.h:7, - from /build/reproducible-path/dawg-1.2/src/var.h:7, - from /build/reproducible-path/dawg-1.2/src/output.cpp:4: -/build/reproducible-path/dawg-1.2/src/indel.h:72:32: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] - 72 | class LinearFunc : public std::unary_function - | ^~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/bits/refwrap.h:39, - from /usr/include/c++/13/vector:68, - from /build/reproducible-path/dawg-1.2/src/dawg.h:42, - from /build/reproducible-path/dawg-1.2/src/output.cpp:3: -/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here - 117 | struct unary_function - | ^~~~~~~~~~~~~~ -/build/reproducible-path/dawg-1.2/src/tree.h:17:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 17 | std::auto_ptr m_pSib; +/build/reproducible-path/dawg-1.2/src/tree.h:199:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 199 | std::auto_ptr m_pInsertionModel; | ^~~~~~~~ -In file included from /usr/include/c++/13/memory:78, - from /build/reproducible-path/dawg-1.2/src/dawg.h:48: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ -/build/reproducible-path/dawg-1.2/src/tree.h:18:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 18 | std::auto_ptr m_pSub; +/build/reproducible-path/dawg-1.2/src/tree.h:200:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 200 | std::auto_ptr m_pDeletionModel; | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ -In file included from /build/reproducible-path/dawg-1.2/src/tree.h:7, - from /build/reproducible-path/dawg-1.2/src/var.h:7, - from /build/reproducible-path/dawg-1.2/src/parser.lpp:5: +/build/reproducible-path/dawg-1.2/src/tree.h:199:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 199 | std::auto_ptr m_pInsertionModel; + | ^~~~~~~~ +/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here + 65 | template class auto_ptr; + | ^~~~~~~~ +/build/reproducible-path/dawg-1.2/src/tree.h:200:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 200 | std::auto_ptr m_pDeletionModel; + | ^~~~~~~~ +/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here + 65 | template class auto_ptr; + | ^~~~~~~~ +In file included from /build/reproducible-path/dawg-1.2/src/indel.cpp:4: /build/reproducible-path/dawg-1.2/src/indel.h:72:32: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 72 | class LinearFunc : public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/dawg-1.2/src/dawg.h:42, - from /build/reproducible-path/dawg-1.2/src/parser.lpp:4: + from /build/reproducible-path/dawg-1.2/src/indel.cpp:3: /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ -/build/reproducible-path/dawg-1.2/src/tree.h:17:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 17 | std::auto_ptr m_pSib; - | ^~~~~~~~ -In file included from /usr/include/c++/13/memory:78, - from /build/reproducible-path/dawg-1.2/src/dawg.h:48: -/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here - 65 | template class auto_ptr; - | ^~~~~~~~ -/build/reproducible-path/dawg-1.2/src/tree.h:18:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 18 | std::auto_ptr m_pSub; - | ^~~~~~~~ -/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here - 65 | template class auto_ptr; - | ^~~~~~~~ In file included from /build/reproducible-path/dawg-1.2/src/tree.h:7, - from /build/reproducible-path/dawg-1.2/src/var.h:7, - from /build/reproducible-path/dawg-1.2/src/var.cpp:4: + from /build/reproducible-path/dawg-1.2/src/tree.cpp:4: /build/reproducible-path/dawg-1.2/src/indel.h:72:32: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 72 | class LinearFunc : public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/dawg-1.2/src/dawg.h:42, - from /build/reproducible-path/dawg-1.2/src/var.cpp:3: + from /build/reproducible-path/dawg-1.2/src/tree.cpp:3: /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ @@ -684,34 +702,34 @@ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ +/build/reproducible-path/dawg-1.2/src/tree.h:18:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 18 | std::auto_ptr m_pSub; + | ^~~~~~~~ +/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here + 65 | template class auto_ptr; + | ^~~~~~~~ /build/reproducible-path/dawg-1.2/src/tree.h:199:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 199 | std::auto_ptr m_pInsertionModel; | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ -/build/reproducible-path/dawg-1.2/src/tree.h:18:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 18 | std::auto_ptr m_pSub; - | ^~~~~~~~ /build/reproducible-path/dawg-1.2/src/tree.h:200:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 200 | std::auto_ptr m_pDeletionModel; | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ -/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here - 65 | template class auto_ptr; - | ^~~~~~~~ In file included from /build/reproducible-path/dawg-1.2/src/tree.h:7, from /build/reproducible-path/dawg-1.2/src/var.h:7, - from /build/reproducible-path/dawg-1.2/src/parser.ypp:5: + from /build/reproducible-path/dawg-1.2/src/output.cpp:4: /build/reproducible-path/dawg-1.2/src/indel.h:72:32: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 72 | class LinearFunc : public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/dawg-1.2/src/dawg.h:42, - from /build/reproducible-path/dawg-1.2/src/parser.ypp:4: + from /build/reproducible-path/dawg-1.2/src/output.cpp:3: /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ @@ -741,14 +759,28 @@ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ -/build/reproducible-path/dawg-1.2/src/tree.h:199:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 199 | std::auto_ptr m_pInsertionModel; +In file included from /build/reproducible-path/dawg-1.2/src/tree.h:7, + from /build/reproducible-path/dawg-1.2/src/dawg.cpp:20: +/build/reproducible-path/dawg-1.2/src/indel.h:72:32: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] + 72 | class LinearFunc : public std::unary_function + | ^~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/bits/refwrap.h:39, + from /usr/include/c++/13/vector:68, + from /build/reproducible-path/dawg-1.2/src/dawg.h:42, + from /build/reproducible-path/dawg-1.2/src/dawg.cpp:19: +/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here + 117 | struct unary_function + | ^~~~~~~~~~~~~~ +/build/reproducible-path/dawg-1.2/src/tree.h:17:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 17 | std::auto_ptr m_pSib; | ^~~~~~~~ +In file included from /usr/include/c++/13/memory:78, + from /build/reproducible-path/dawg-1.2/src/dawg.h:48: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ -/build/reproducible-path/dawg-1.2/src/tree.h:200:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 200 | std::auto_ptr m_pDeletionModel; +/build/reproducible-path/dawg-1.2/src/tree.h:18:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 18 | std::auto_ptr m_pSub; | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; @@ -765,14 +797,29 @@ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ -/build/reproducible-path/dawg-1.2/src/tree.h:199:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 199 | std::auto_ptr m_pInsertionModel; +In file included from /build/reproducible-path/dawg-1.2/src/tree.h:7, + from /build/reproducible-path/dawg-1.2/src/var.h:7, + from /build/reproducible-path/dawg-1.2/src/parser.ypp:5: +/build/reproducible-path/dawg-1.2/src/indel.h:72:32: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] + 72 | class LinearFunc : public std::unary_function + | ^~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/bits/refwrap.h:39, + from /usr/include/c++/13/vector:68, + from /build/reproducible-path/dawg-1.2/src/dawg.h:42, + from /build/reproducible-path/dawg-1.2/src/parser.ypp:4: +/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here + 117 | struct unary_function + | ^~~~~~~~~~~~~~ +/build/reproducible-path/dawg-1.2/src/tree.h:17:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 17 | std::auto_ptr m_pSib; | ^~~~~~~~ +In file included from /usr/include/c++/13/memory:78, + from /build/reproducible-path/dawg-1.2/src/dawg.h:48: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ -/build/reproducible-path/dawg-1.2/src/tree.h:200:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 200 | std::auto_ptr m_pDeletionModel; +/build/reproducible-path/dawg-1.2/src/tree.h:18:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 18 | std::auto_ptr m_pSub; | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; @@ -789,17 +836,6 @@ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ -In file included from /build/reproducible-path/dawg-1.2/src/indel.cpp:4: -/build/reproducible-path/dawg-1.2/src/indel.h:72:32: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] - 72 | class LinearFunc : public std::unary_function - | ^~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/bits/refwrap.h:39, - from /usr/include/c++/13/vector:68, - from /build/reproducible-path/dawg-1.2/src/dawg.h:42, - from /build/reproducible-path/dawg-1.2/src/indel.cpp:3: -/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here - 117 | struct unary_function - | ^~~~~~~~~~~~~~ [100%] Linking CXX executable dawg cd /build/reproducible-path/dawg-1.2/obj-x86_64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/dawg.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/dawg-1.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/dawg.dir/dawg.cpp.o CMakeFiles/dawg.dir/eigen.cpp.o CMakeFiles/dawg.dir/indel.cpp.o CMakeFiles/dawg.dir/matrix.cpp.o CMakeFiles/dawg.dir/output.cpp.o CMakeFiles/dawg.dir/rand.cpp.o CMakeFiles/dawg.dir/tree.cpp.o CMakeFiles/dawg.dir/var.cpp.o CMakeFiles/dawg.dir/lex.parser.cpp.o CMakeFiles/dawg.dir/parser.tab.cpp.o -o dawg @@ -888,8 +924,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'dawg' in '../dawg_1.2-4_amd64.deb'. dpkg-deb: building package 'dawg-dbgsym' in '../dawg-dbgsym_1.2-4_amd64.deb'. +dpkg-deb: building package 'dawg' in '../dawg_1.2-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../dawg_1.2-4_amd64.buildinfo dpkg-genchanges --build=binary -O../dawg_1.2-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -897,12 +933,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/4053521/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/4053521/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2224535 and its subdirectories -I: Current time: Wed Jun 4 08:16:50 -12 2025 -I: pbuilder-time-stamp: 1749068210 +I: removing directory /srv/workspace/pbuilder/4053521 and its subdirectories +I: Current time: Fri May 3 03:55:08 +14 2024 +I: pbuilder-time-stamp: 1714658108