Diff of the two buildlogs:
--
--- b1/build.log 2025-04-04 12:15:46.781901823 +0000
+++ b2/build.log 2025-04-04 12:17:16.851848142 +0000
@@ -1,6 +1,6 @@
I: pbuilder: network access will be disabled during build
-I: Current time: Thu May 7 06:33:48 -12 2026
-I: pbuilder-time-stamp: 1778178828
+I: Current time: Sat Apr 5 02:15:49 +14 2025
+I: pbuilder-time-stamp: 1743768949
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz]
I: copying local configuration
@@ -26,51 +26,83 @@
dpkg-source: info: applying fix_pkg-config.patch
I: Not using root during the build.
I: Installing the build-deps
-I: user script /srv/workspace/pbuilder/1334275/tmp/hooks/D02_print_environment starting
+I: user script /srv/workspace/pbuilder/2276755/tmp/hooks/D01_modify_environment starting
+debug: Running on infom01-amd64.
+I: Changing host+domainname to test build reproducibility
+I: Adding a custom variable just for the fun of it...
+I: Changing /bin/sh to bash
+'/bin/sh' -> '/bin/bash'
+lrwxrwxrwx 1 root root 9 Apr 4 12:15 /bin/sh -> /bin/bash
+I: Setting pbuilder2's login shell to /bin/bash
+I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
+I: user script /srv/workspace/pbuilder/2276755/tmp/hooks/D01_modify_environment finished
+I: user script /srv/workspace/pbuilder/2276755/tmp/hooks/D02_print_environment starting
I: set
- BUILDDIR='/build/reproducible-path'
- BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
- BUILDUSERNAME='pbuilder1'
- BUILD_ARCH='amd64'
- DEBIAN_FRONTEND='noninteractive'
+ BASH=/bin/sh
+ BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
+ BASH_ALIASES=()
+ BASH_ARGC=()
+ BASH_ARGV=()
+ BASH_CMDS=()
+ BASH_LINENO=([0]="12" [1]="0")
+ BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
+ BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
+ BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu")
+ BASH_VERSION='5.2.37(1)-release'
+ BUILDDIR=/build/reproducible-path
+ BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
+ BUILDUSERNAME=pbuilder2
+ BUILD_ARCH=amd64
+ DEBIAN_FRONTEND=noninteractive
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 '
- DISTRIBUTION='trixie'
- HOME='/root'
- HOST_ARCH='amd64'
+ DIRSTACK=()
+ DISTRIBUTION=trixie
+ EUID=0
+ FUNCNAME=([0]="Echo" [1]="main")
+ GROUPS=()
+ HOME=/root
+ HOSTNAME=i-capture-the-hostname
+ HOSTTYPE=x86_64
+ HOST_ARCH=amd64
IFS='
'
- INVOCATION_ID='ce98e4d852b844b8be7ea741846f2581'
- LANG='C'
- LANGUAGE='en_US:en'
- LC_ALL='C'
- MAIL='/var/mail/root'
- OPTIND='1'
- PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
- PBCURRENTCOMMANDLINEOPERATION='build'
- PBUILDER_OPERATION='build'
- PBUILDER_PKGDATADIR='/usr/share/pbuilder'
- PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
- PBUILDER_SYSCONFDIR='/etc'
- PPID='1334275'
- PS1='# '
- PS2='> '
+ INVOCATION_ID=67fc0cea19b249cb8d1638c28a923a8a
+ LANG=C
+ LANGUAGE=et_EE:et
+ LC_ALL=C
+ MACHTYPE=x86_64-pc-linux-gnu
+ MAIL=/var/mail/root
+ OPTERR=1
+ OPTIND=1
+ OSTYPE=linux-gnu
+ PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
+ PBCURRENTCOMMANDLINEOPERATION=build
+ PBUILDER_OPERATION=build
+ PBUILDER_PKGDATADIR=/usr/share/pbuilder
+ PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
+ PBUILDER_SYSCONFDIR=/etc
+ PIPESTATUS=([0]="0")
+ POSIXLY_CORRECT=y
+ PPID=2276755
PS4='+ '
- PWD='/'
- SHELL='/bin/bash'
- SHLVL='2'
- SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.HsNAwP6m/pbuilderrc_Rywt --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.HsNAwP6m/b1 --logfile b1/build.log clipper_2.1.20201109-2.dsc'
- SUDO_GID='109'
- SUDO_UID='104'
- SUDO_USER='jenkins'
- TERM='unknown'
- TZ='/usr/share/zoneinfo/Etc/GMT+12'
- USER='root'
- _='/usr/bin/systemd-run'
+ PWD=/
+ SHELL=/bin/bash
+ SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
+ SHLVL=3
+ SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.HsNAwP6m/pbuilderrc_ecWE --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.HsNAwP6m/b2 --logfile b2/build.log clipper_2.1.20201109-2.dsc'
+ SUDO_GID=109
+ SUDO_UID=104
+ SUDO_USER=jenkins
+ TERM=unknown
+ TZ=/usr/share/zoneinfo/Etc/GMT-14
+ UID=0
+ USER=root
+ _='I: set'
I: uname -a
- Linux infom02-amd64 6.12.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.12-1~bpo12+1 (2025-02-23) x86_64 GNU/Linux
+ Linux i-capture-the-hostname 6.1.0-32-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) x86_64 GNU/Linux
I: ls -l /bin
- lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin
-I: user script /srv/workspace/pbuilder/1334275/tmp/hooks/D02_print_environment finished
+ lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin
+I: user script /srv/workspace/pbuilder/2276755/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
@@ -207,7 +239,7 @@
Get: 87 http://deb.debian.org/debian trixie/main amd64 libmmdb2-dev amd64 2.0.22-1+b2 [92.9 kB]
Get: 88 http://deb.debian.org/debian trixie/main amd64 sfftw2 amd64 2.1.5-7+b1 [254 kB]
Get: 89 http://deb.debian.org/debian trixie/main amd64 sfftw-dev amd64 2.1.5-7+b1 [293 kB]
-Fetched 141 MB in 3s (40.6 MB/s)
+Fetched 141 MB in 1s (146 MB/s)
Preconfiguring packages ...
Selecting previously unselected package sensible-utils.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19805 files and directories currently installed.)
@@ -581,7 +613,11 @@
Building tag database...
-> Finished parsing the build-deps
I: Building the package
-I: Running cd /build/reproducible-path/clipper-2.1.20201109/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../clipper_2.1.20201109-2_source.changes
+I: user script /srv/workspace/pbuilder/2276755/tmp/hooks/A99_set_merged_usr starting
+Not re-configuring usrmerge for trixie
+I: user script /srv/workspace/pbuilder/2276755/tmp/hooks/A99_set_merged_usr finished
+hostname: Name or service not known
+I: Running cd /build/reproducible-path/clipper-2.1.20201109/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../clipper_2.1.20201109-2_source.changes
dpkg-buildpackage: info: source package clipper
dpkg-buildpackage: info: source version 2.1.20201109-2
dpkg-buildpackage: info: source distribution unstable
@@ -947,9 +983,9 @@
/build/reproducible-path/clipper-2.1.20201109/dox/clipper_minimol.dox:1: warning: found more than one \mainpage comment block! (first occurrence: /build/reproducible-path/clipper-2.1.20201109/dox/clipper.dox, line 1), Skipping current block!
/build/reproducible-path/clipper-2.1.20201109/dox/clipper_mmdb.dox:1: warning: found more than one \mainpage comment block! (first occurrence: /build/reproducible-path/clipper-2.1.20201109/dox/clipper.dox, line 1), Skipping current block!
/build/reproducible-path/clipper-2.1.20201109/dox/clipper_mmdbold.dox:1: warning: found more than one \mainpage comment block! (first occurrence: /build/reproducible-path/clipper-2.1.20201109/dox/clipper.dox, line 1), Skipping current block!
-sh: 1: latex: not found
+sh: line 1: latex: command not found
error: Problems running latex. Check your installation or look for typos in _formulas.tex and check _formulas.log!
-sh: 1: latex: not found
+sh: line 1: latex: command not found
error: Problems running latex. Check your installation or look for typos in _formulas_dark.tex and check _formulas_dark.log!
/build/reproducible-path/clipper-2.1.20201109/dox/develop.dox:167: warning: Illegal command \width found as part of a image
/build/reproducible-path/clipper-2.1.20201109/dox/installation.dox:18: warning: included file install.csh is not found. Check your EXAMPLE_PATH
@@ -1070,95 +1106,95 @@
make[3]: Entering directory '/build/reproducible-path/clipper-2.1.20201109/clipper'
Making all in core
make[4]: Entering directory '/build/reproducible-path/clipper-2.1.20201109/clipper/core'
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-atomsf.lo `test -f 'atomsf.cpp' || echo './'`atomsf.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-coords.lo `test -f 'coords.cpp' || echo './'`coords.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-nxmap_operator.lo `test -f 'nxmap_operator.cpp' || echo './'`nxmap_operator.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-cell.lo `test -f 'cell.cpp' || echo './'`cell.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-derivs.lo `test -f 'derivs.cpp' || echo './'`derivs.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-ramachandran.lo `test -f 'ramachandran.cpp' || echo './'`ramachandran.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_instance.lo `test -f 'clipper_instance.cpp' || echo './'`clipper_instance.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-fftmap.lo `test -f 'fftmap.cpp' || echo './'`fftmap.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-resol_basisfn.lo `test -f 'resol_basisfn.cpp' || echo './'`resol_basisfn.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_memory.lo `test -f 'clipper_memory.cpp' || echo './'`clipper_memory.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-fftmap_sparse.lo `test -f 'fftmap_sparse.cpp' || echo './'`fftmap_sparse.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-resol_fn.lo `test -f 'resol_fn.cpp' || echo './'`resol_fn.cpp
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c coords.cpp -fPIC -DPIC -o .libs/libclipper_core_la-coords.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c fftmap.cpp -fPIC -DPIC -o .libs/libclipper_core_la-fftmap.o
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-atomsf.lo `test -f 'atomsf.cpp' || echo './'`atomsf.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-coords.lo `test -f 'coords.cpp' || echo './'`coords.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-nxmap_operator.lo `test -f 'nxmap_operator.cpp' || echo './'`nxmap_operator.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-cell.lo `test -f 'cell.cpp' || echo './'`cell.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-derivs.lo `test -f 'derivs.cpp' || echo './'`derivs.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-ramachandran.lo `test -f 'ramachandran.cpp' || echo './'`ramachandran.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_instance.lo `test -f 'clipper_instance.cpp' || echo './'`clipper_instance.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-fftmap.lo `test -f 'fftmap.cpp' || echo './'`fftmap.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-resol_basisfn.lo `test -f 'resol_basisfn.cpp' || echo './'`resol_basisfn.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_memory.lo `test -f 'clipper_memory.cpp' || echo './'`clipper_memory.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-fftmap_sparse.lo `test -f 'fftmap_sparse.cpp' || echo './'`fftmap_sparse.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-resol_fn.lo `test -f 'resol_fn.cpp' || echo './'`resol_fn.cpp
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c resol_basisfn.cpp -fPIC -DPIC -o .libs/libclipper_core_la-resol_basisfn.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c nxmap_operator.cpp -fPIC -DPIC -o .libs/libclipper_core_la-nxmap_operator.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c cell.cpp -fPIC -DPIC -o .libs/libclipper_core_la-cell.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c derivs.cpp -fPIC -DPIC -o .libs/libclipper_core_la-derivs.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c ramachandran.cpp -fPIC -DPIC -o .libs/libclipper_core_la-ramachandran.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c nxmap_operator.cpp -fPIC -DPIC -o .libs/libclipper_core_la-nxmap_operator.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c clipper_memory.cpp -fPIC -DPIC -o .libs/libclipper_core_la-clipper_memory.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c resol_fn.cpp -fPIC -DPIC -o .libs/libclipper_core_la-resol_fn.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c clipper_instance.cpp -fPIC -DPIC -o .libs/libclipper_core_la-clipper_instance.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c resol_basisfn.cpp -fPIC -DPIC -o .libs/libclipper_core_la-resol_basisfn.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c atomsf.cpp -fPIC -DPIC -o .libs/libclipper_core_la-atomsf.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c clipper_memory.cpp -fPIC -DPIC -o .libs/libclipper_core_la-clipper_memory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c fftmap_sparse.cpp -fPIC -DPIC -o .libs/libclipper_core_la-fftmap_sparse.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c atomsf.cpp -fPIC -DPIC -o .libs/libclipper_core_la-atomsf.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c resol_fn.cpp -fPIC -DPIC -o .libs/libclipper_core_la-resol_fn.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c derivs.cpp -fPIC -DPIC -o .libs/libclipper_core_la-derivs.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c coords.cpp -fPIC -DPIC -o .libs/libclipper_core_la-coords.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c fftmap.cpp -fPIC -DPIC -o .libs/libclipper_core_la-fftmap.o
atomsf.cpp: In member function 'const clipper::ScatteringFactorsData& clipper::ScatteringFactors::operator[](const clipper::String&) const':
atomsf.cpp:438:82: warning: control reaches end of non-void function [-Wreturn-type]
438 | default: Message::message(Message_fatal("unimplemented type"));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_message.lo `test -f 'clipper_message.cpp' || echo './'`clipper_message.cpp
atomsf.cpp: In static member function 'static const clipper::ScatteringFactorsData& clipper::ScatteringFactorsTraits<TYPE>::sf(const clipper::String&, int) [with clipper::ScatteringFactorsType TYPE = clipper::SF_WAASMAIER_KIRFEL]':
atomsf.cpp:406:1: warning: control reaches end of non-void function [-Wreturn-type]
406 | }
| ^
atomsf.cpp: In static member function 'static const clipper::ScatteringFactorsData& clipper::ScatteringFactorsTraits<TYPE>::sf(const clipper::String&, int) [with clipper::ScatteringFactorsType TYPE = clipper::SF_ELECTRON]':
atomsf.cpp:406:1: warning: control reaches end of non-void function [-Wreturn-type]
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_message.lo `test -f 'clipper_message.cpp' || echo './'`clipper_message.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c clipper_message.cpp -fPIC -DPIC -o .libs/libclipper_core_la-clipper_message.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-hkl_compute.lo `test -f 'hkl_compute.cpp' || echo './'`hkl_compute.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-hkl_compute.lo `test -f 'hkl_compute.cpp' || echo './'`hkl_compute.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-resol_targetfn.lo `test -f 'resol_targetfn.cpp' || echo './'`resol_targetfn.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c hkl_compute.cpp -fPIC -DPIC -o .libs/libclipper_core_la-hkl_compute.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-resol_targetfn.lo `test -f 'resol_targetfn.cpp' || echo './'`resol_targetfn.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_stats.lo `test -f 'clipper_stats.cpp' || echo './'`clipper_stats.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-hkl_data.lo `test -f 'hkl_data.cpp' || echo './'`hkl_data.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_stats.lo `test -f 'clipper_stats.cpp' || echo './'`clipper_stats.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c resol_targetfn.cpp -fPIC -DPIC -o .libs/libclipper_core_la-resol_targetfn.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-rotation.lo `test -f 'rotation.cpp' || echo './'`rotation.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c clipper_stats.cpp -fPIC -DPIC -o .libs/libclipper_core_la-clipper_stats.o
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-hkl_data.lo `test -f 'hkl_data.cpp' || echo './'`hkl_data.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-rotation.lo `test -f 'rotation.cpp' || echo './'`rotation.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c hkl_data.cpp -fPIC -DPIC -o .libs/libclipper_core_la-hkl_data.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c rotation.cpp -fPIC -DPIC -o .libs/libclipper_core_la-rotation.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_test.lo `test -f 'clipper_test.cpp' || echo './'`clipper_test.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-hkl_datatypes.lo `test -f 'hkl_datatypes.cpp' || echo './'`hkl_datatypes.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_test.lo `test -f 'clipper_test.cpp' || echo './'`clipper_test.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-hkl_datatypes.lo `test -f 'hkl_datatypes.cpp' || echo './'`hkl_datatypes.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c clipper_test.cpp -fPIC -DPIC -o .libs/libclipper_core_la-clipper_test.o
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-spacegroup.lo `test -f 'spacegroup.cpp' || echo './'`spacegroup.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_types.lo `test -f 'clipper_types.cpp' || echo './'`clipper_types.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c hkl_datatypes.cpp -fPIC -DPIC -o .libs/libclipper_core_la-hkl_datatypes.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-spacegroup.lo `test -f 'spacegroup.cpp' || echo './'`spacegroup.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_types.lo `test -f 'clipper_types.cpp' || echo './'`clipper_types.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c spacegroup.cpp -fPIC -DPIC -o .libs/libclipper_core_la-spacegroup.o
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-hkl_info.lo `test -f 'hkl_info.cpp' || echo './'`hkl_info.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c clipper_types.cpp -fPIC -DPIC -o .libs/libclipper_core_la-clipper_types.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-hkl_info.lo `test -f 'hkl_info.cpp' || echo './'`hkl_info.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c hkl_info.cpp -fPIC -DPIC -o .libs/libclipper_core_la-hkl_info.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-spacegroup_data.lo `test -f 'spacegroup_data.cpp' || echo './'`spacegroup_data.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-spacegroup_data.lo `test -f 'spacegroup_data.cpp' || echo './'`spacegroup_data.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c spacegroup_data.cpp -fPIC -DPIC -o .libs/libclipper_core_la-spacegroup_data.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_util.lo `test -f 'clipper_util.cpp' || echo './'`clipper_util.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-hkl_lookup.lo `test -f 'hkl_lookup.cpp' || echo './'`hkl_lookup.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_util.lo `test -f 'clipper_util.cpp' || echo './'`clipper_util.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-hkl_lookup.lo `test -f 'hkl_lookup.cpp' || echo './'`hkl_lookup.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c clipper_util.cpp -fPIC -DPIC -o .libs/libclipper_core_la-clipper_util.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-symop.lo `test -f 'symop.cpp' || echo './'`symop.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c hkl_lookup.cpp -fPIC -DPIC -o .libs/libclipper_core_la-hkl_lookup.o
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-symop.lo `test -f 'symop.cpp' || echo './'`symop.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c symop.cpp -fPIC -DPIC -o .libs/libclipper_core_la-symop.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-container.lo `test -f 'container.cpp' || echo './'`container.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-hkl_operators.lo `test -f 'hkl_operators.cpp' || echo './'`hkl_operators.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-container.lo `test -f 'container.cpp' || echo './'`container.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-hkl_operators.lo `test -f 'hkl_operators.cpp' || echo './'`hkl_operators.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c container.cpp -fPIC -DPIC -o .libs/libclipper_core_la-container.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-container_hkl.lo `test -f 'container_hkl.cpp' || echo './'`container_hkl.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c hkl_operators.cpp -fPIC -DPIC -o .libs/libclipper_core_la-hkl_operators.o
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-container_hkl.lo `test -f 'container_hkl.cpp' || echo './'`container_hkl.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c container_hkl.cpp -fPIC -DPIC -o .libs/libclipper_core_la-container_hkl.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-map_interp.lo `test -f 'map_interp.cpp' || echo './'`map_interp.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-map_interp.lo `test -f 'map_interp.cpp' || echo './'`map_interp.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c map_interp.cpp -fPIC -DPIC -o .libs/libclipper_core_la-map_interp.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-container_map.lo `test -f 'container_map.cpp' || echo './'`container_map.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-container_map.lo `test -f 'container_map.cpp' || echo './'`container_map.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c container_map.cpp -fPIC -DPIC -o .libs/libclipper_core_la-container_map.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-map_utils.lo `test -f 'map_utils.cpp' || echo './'`map_utils.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-xmap.lo `test -f 'xmap.cpp' || echo './'`xmap.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-map_utils.lo `test -f 'map_utils.cpp' || echo './'`map_utils.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-xmap.lo `test -f 'xmap.cpp' || echo './'`xmap.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-container_types.lo `test -f 'container_types.cpp' || echo './'`container_types.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c map_utils.cpp -fPIC -DPIC -o .libs/libclipper_core_la-map_utils.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c xmap.cpp -fPIC -DPIC -o .libs/libclipper_core_la-xmap.o
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-container_types.lo `test -f 'container_types.cpp' || echo './'`container_types.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-nxmap.lo `test -f 'nxmap.cpp' || echo './'`nxmap.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_thread.lo `test -f 'clipper_thread.cpp' || echo './'`clipper_thread.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-test_core.lo `test -f 'test_core.cpp' || echo './'`test_core.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-test_data.lo `test -f 'test_data.cpp' || echo './'`test_data.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c container_types.cpp -fPIC -DPIC -o .libs/libclipper_core_la-container_types.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c test_core.cpp -fPIC -DPIC -o .libs/libclipper_core_la-test_core.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c clipper_thread.cpp -fPIC -DPIC -o .libs/libclipper_core_la-clipper_thread.o
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-nxmap.lo `test -f 'nxmap.cpp' || echo './'`nxmap.cpp
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c xmap.cpp -fPIC -DPIC -o .libs/libclipper_core_la-xmap.o
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-clipper_thread.lo `test -f 'clipper_thread.cpp' || echo './'`clipper_thread.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-test_core.lo `test -f 'test_core.cpp' || echo './'`test_core.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c nxmap.cpp -fPIC -DPIC -o .libs/libclipper_core_la-nxmap.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c clipper_thread.cpp -fPIC -DPIC -o .libs/libclipper_core_la-clipper_thread.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c test_core.cpp -fPIC -DPIC -o .libs/libclipper_core_la-test_core.o
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o libclipper_core_la-test_data.lo `test -f 'test_data.cpp' || echo './'`test_data.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c test_data.cpp -fPIC -DPIC -o .libs/libclipper_core_la-test_data.o
-/bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o libclipper-core.la -rpath /usr/lib/x86_64-linux-gnu libclipper_core_la-atomsf.lo libclipper_core_la-coords.lo libclipper_core_la-nxmap_operator.lo libclipper_core_la-cell.lo libclipper_core_la-derivs.lo libclipper_core_la-ramachandran.lo libclipper_core_la-clipper_instance.lo libclipper_core_la-fftmap.lo libclipper_core_la-resol_basisfn.lo libclipper_core_la-clipper_memory.lo libclipper_core_la-fftmap_sparse.lo libclipper_core_la-resol_fn.lo libclipper_core_la-clipper_message.lo libclipper_core_la-hkl_compute.lo libclipper_core_la-resol_targetfn.lo libclipper_core_la-clipper_stats.lo libclipper_core_la-hkl_data.lo libclipper_core_la-rotation.lo libclipper_core_la-clipper_test.lo libclipper_core_la-hkl_datatypes.lo libclipper_core_la-spacegroup.lo libclipper_core_la-clipper_types.lo libclipper_core_la-hkl_info.lo libclipper_core_la-spacegroup_data.lo libclipper_core_la-clipper_util.lo libclipper_core_la-hkl_lookup.lo libclipper_core_la-symop.lo libclipper_core_la-container.lo libclipper_core_la-hkl_operators.lo libclipper_core_la-container_hkl.lo libclipper_core_la-map_interp.lo libclipper_core_la-container_map.lo libclipper_core_la-map_utils.lo libclipper_core_la-xmap.lo libclipper_core_la-container_types.lo libclipper_core_la-nxmap.lo libclipper_core_la-clipper_thread.lo libclipper_core_la-test_core.lo libclipper_core_la-test_data.lo -lsrfftw -lsfftw -lpthread -lm
+/bin/sh ../../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o libclipper-core.la -rpath /usr/lib/x86_64-linux-gnu libclipper_core_la-atomsf.lo libclipper_core_la-coords.lo libclipper_core_la-nxmap_operator.lo libclipper_core_la-cell.lo libclipper_core_la-derivs.lo libclipper_core_la-ramachandran.lo libclipper_core_la-clipper_instance.lo libclipper_core_la-fftmap.lo libclipper_core_la-resol_basisfn.lo libclipper_core_la-clipper_memory.lo libclipper_core_la-fftmap_sparse.lo libclipper_core_la-resol_fn.lo libclipper_core_la-clipper_message.lo libclipper_core_la-hkl_compute.lo libclipper_core_la-resol_targetfn.lo libclipper_core_la-clipper_stats.lo libclipper_core_la-hkl_data.lo libclipper_core_la-rotation.lo libclipper_core_la-clipper_test.lo libclipper_core_la-hkl_datatypes.lo libclipper_core_la-spacegroup.lo libclipper_core_la-clipper_types.lo libclipper_core_la-hkl_info.lo libclipper_core_la-spacegroup_data.lo libclipper_core_la-clipper_util.lo libclipper_core_la-hkl_lookup.lo libclipper_core_la-symop.lo libclipper_core_la-container.lo libclipper_core_la-hkl_operators.lo libclipper_core_la-container_hkl.lo libclipper_core_la-map_interp.lo libclipper_core_la-container_map.lo libclipper_core_la-map_utils.lo libclipper_core_la-xmap.lo libclipper_core_la-container_types.lo libclipper_core_la-nxmap.lo libclipper_core_la-clipper_thread.lo libclipper_core_la-test_core.lo libclipper_core_la-test_data.lo -lsrfftw -lsfftw -lpthread -lm
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o .libs/libclipper_core_la-atomsf.o .libs/libclipper_core_la-coords.o .libs/libclipper_core_la-nxmap_operator.o .libs/libclipper_core_la-cell.o .libs/libclipper_core_la-derivs.o .libs/libclipper_core_la-ramachandran.o .libs/libclipper_core_la-clipper_instance.o .libs/libclipper_core_la-fftmap.o .libs/libclipper_core_la-resol_basisfn.o .libs/libclipper_core_la-clipper_memory.o .libs/libclipper_core_la-fftmap_sparse.o .libs/libclipper_core_la-resol_fn.o .libs/libclipper_core_la-clipper_message.o .libs/libclipper_core_la-hkl_compute.o .libs/libclipper_core_la-resol_targetfn.o .libs/libclipper_core_la-clipper_stats.o .libs/libclipper_core_la-hkl_data.o .libs/libclipper_core_la-rotation.o .libs/libclipper_core_la-clipper_test.o .libs/libclipper_core_la-hkl_datatypes.o .libs/libclipper_core_la-spacegroup.o .libs/libclipper_core_la-clipper_types.o .libs/libclipper_core_la-hkl_info.o .libs/libclipper_core_la-spacegroup_data.o .libs/libclipper_core_la-clipper_util.o .libs/libclipper_core_la-hkl_lookup.o .libs/libclipper_core_la-symop.o .libs/libclipper_core_la-container.o .libs/libclipper_core_la-hkl_operators.o .libs/libclipper_core_la-container_hkl.o .libs/libclipper_core_la-map_interp.o .libs/libclipper_core_la-container_map.o .libs/libclipper_core_la-map_utils.o .libs/libclipper_core_la-xmap.o .libs/libclipper_core_la-container_types.o .libs/libclipper_core_la-nxmap.o .libs/libclipper_core_la-clipper_thread.o .libs/libclipper_core_la-test_core.o .libs/libclipper_core_la-test_data.o -lsrfftw -lsfftw -lpthread -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-core.so.2 -o .libs/libclipper-core.so.2.0.1
libtool: link: (cd ".libs" && rm -f "libclipper-core.so.2" && ln -s "libclipper-core.so.2.0.1" "libclipper-core.so.2")
libtool: link: (cd ".libs" && rm -f "libclipper-core.so" && ln -s "libclipper-core.so.2.0.1" "libclipper-core.so")
@@ -1166,69 +1202,69 @@
make[4]: Leaving directory '/build/reproducible-path/clipper-2.1.20201109/clipper/core'
Making all in contrib
make[4]: Entering directory '/build/reproducible-path/clipper-2.1.20201109/clipper/contrib'
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o convolution_search.lo convolution_search.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o sfcalc.lo sfcalc.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o edcalc.lo edcalc.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o sfcalc_obs.lo sfcalc_obs.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o fffear.lo fffear.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o sfscale.lo sfscale.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o function_object_bases.lo function_object_bases.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o sfweight.lo sfweight.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o mapfilter.lo mapfilter.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o skeleton.lo skeleton.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o originmatch.lo originmatch.cpp
-/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o test_contrib.lo test_contrib.cpp
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c edcalc.cpp -fPIC -DPIC -o .libs/edcalc.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c sfscale.cpp -fPIC -DPIC -o .libs/sfscale.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c sfcalc.cpp -fPIC -DPIC -o .libs/sfcalc.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c sfweight.cpp -fPIC -DPIC -o .libs/sfweight.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c sfcalc_obs.cpp -fPIC -DPIC -o .libs/sfcalc_obs.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c convolution_search.cpp -fPIC -DPIC -o .libs/convolution_search.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c test_contrib.cpp -fPIC -DPIC -o .libs/test_contrib.o
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o convolution_search.lo convolution_search.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o sfcalc.lo sfcalc.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o edcalc.lo edcalc.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o sfcalc_obs.lo sfcalc_obs.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o fffear.lo fffear.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o sfscale.lo sfscale.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o function_object_bases.lo function_object_bases.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o sfweight.lo sfweight.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o mapfilter.lo mapfilter.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o skeleton.lo skeleton.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o originmatch.lo originmatch.cpp
+/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o test_contrib.lo test_contrib.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c function_object_bases.cpp -fPIC -DPIC -o .libs/function_object_bases.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c fffear.cpp -fPIC -DPIC -o .libs/fffear.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c mapfilter.cpp -fPIC -DPIC -o .libs/mapfilter.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c test_contrib.cpp -fPIC -DPIC -o .libs/test_contrib.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c skeleton.cpp -fPIC -DPIC -o .libs/skeleton.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c originmatch.cpp -fPIC -DPIC -o .libs/originmatch.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c mapfilter.cpp -fPIC -DPIC -o .libs/mapfilter.o
-/bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o libclipper-contrib.la -rpath /usr/lib/x86_64-linux-gnu convolution_search.lo sfcalc.lo edcalc.lo sfcalc_obs.lo fffear.lo sfscale.lo function_object_bases.lo sfweight.lo mapfilter.lo skeleton.lo originmatch.lo test_contrib.lo ../core/libclipper-core.la -lm
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c sfscale.cpp -fPIC -DPIC -o .libs/sfscale.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c sfcalc_obs.cpp -fPIC -DPIC -o .libs/sfcalc_obs.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c sfweight.cpp -fPIC -DPIC -o .libs/sfweight.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c edcalc.cpp -fPIC -DPIC -o .libs/edcalc.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c fffear.cpp -fPIC -DPIC -o .libs/fffear.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c convolution_search.cpp -fPIC -DPIC -o .libs/convolution_search.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c sfcalc.cpp -fPIC -DPIC -o .libs/sfcalc.o
+/bin/sh ../../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o libclipper-contrib.la -rpath /usr/lib/x86_64-linux-gnu convolution_search.lo sfcalc.lo edcalc.lo sfcalc_obs.lo fffear.lo sfscale.lo function_object_bases.lo sfweight.lo mapfilter.lo skeleton.lo originmatch.lo test_contrib.lo ../core/libclipper-core.la -lm
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o .libs/convolution_search.o .libs/sfcalc.o .libs/edcalc.o .libs/sfcalc_obs.o .libs/fffear.o .libs/sfscale.o .libs/function_object_bases.o .libs/sfweight.o .libs/mapfilter.o .libs/skeleton.o .libs/originmatch.o .libs/test_contrib.o -Wl,-rpath -Wl,/build/reproducible-path/clipper-2.1.20201109/clipper/core/.libs ../core/.libs/libclipper-core.so -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-contrib.so.2 -o .libs/libclipper-contrib.so.2.0.1
libtool: link: (cd ".libs" && rm -f "libclipper-contrib.so.2" && ln -s "libclipper-contrib.so.2.0.1" "libclipper-contrib.so.2")
libtool: link: (cd ".libs" && rm -f "libclipper-contrib.so" && ln -s "libclipper-contrib.so.2.0.1" "libclipper-contrib.so")
libtool: link: ( cd ".libs" && rm -f "libclipper-contrib.la" && ln -s "../libclipper-contrib.la" "libclipper-contrib.la" )
make[4]: Leaving directory '/build/reproducible-path/clipper-2.1.20201109/clipper/contrib'
make[4]: Entering directory '/build/reproducible-path/clipper-2.1.20201109/clipper'
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o mmdb/clipper_mmdb.lo mmdb/clipper_mmdb.cpp
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o minimol/minimol.lo minimol/minimol.cpp
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o minimol/container_minimol.lo minimol/container_minimol.cpp
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o minimol/minimol_data.lo minimol/minimol_data.cpp
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o minimol/minimol_io.lo minimol/minimol_io.cpp
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o minimol/minimol_seq.lo minimol/minimol_seq.cpp
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o minimol/minimol_utils.lo minimol/minimol_utils.cpp
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o phs/phs_io.lo phs/phs_io.cpp
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o cif/cif_data_io.lo cif/cif_data_io.cpp
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o ccp4/ccp4_mtz_types.lo ccp4/ccp4_mtz_types.cpp
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o ccp4/ccp4_mtz_io.lo ccp4/ccp4_mtz_io.cpp
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o ccp4/ccp4_map_io.lo ccp4/ccp4_map_io.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o mmdb/clipper_mmdb.lo mmdb/clipper_mmdb.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o minimol/minimol.lo minimol/minimol.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o minimol/container_minimol.lo minimol/container_minimol.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o minimol/minimol_data.lo minimol/minimol_data.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o minimol/minimol_io.lo minimol/minimol_io.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o minimol/minimol_seq.lo minimol/minimol_seq.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o minimol/minimol_utils.lo minimol/minimol_utils.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o phs/phs_io.lo phs/phs_io.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o cif/cif_data_io.lo cif/cif_data_io.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o ccp4/ccp4_mtz_types.lo ccp4/ccp4_mtz_types.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o ccp4/ccp4_mtz_io.lo ccp4/ccp4_mtz_io.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o ccp4/ccp4_map_io.lo ccp4/ccp4_map_io.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c minimol/minimol.cpp -fPIC -DPIC -o minimol/.libs/minimol.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c minimol/minimol_seq.cpp -fPIC -DPIC -o minimol/.libs/minimol_seq.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c minimol/minimol_data.cpp -fPIC -DPIC -o minimol/.libs/minimol_data.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c minimol/minimol_utils.cpp -fPIC -DPIC -o minimol/.libs/minimol_utils.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c cif/cif_data_io.cpp -fPIC -DPIC -o cif/.libs/cif_data_io.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c ccp4/ccp4_mtz_types.cpp -fPIC -DPIC -o ccp4/.libs/ccp4_mtz_types.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c minimol/container_minimol.cpp -fPIC -DPIC -o minimol/.libs/container_minimol.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c mmdb/clipper_mmdb.cpp -fPIC -DPIC -o mmdb/.libs/clipper_mmdb.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c minimol/minimol_io.cpp -fPIC -DPIC -o minimol/.libs/minimol_io.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c ccp4/ccp4_map_io.cpp -fPIC -DPIC -o ccp4/.libs/ccp4_map_io.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c phs/phs_io.cpp -fPIC -DPIC -o phs/.libs/phs_io.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c minimol/minimol_utils.cpp -fPIC -DPIC -o minimol/.libs/minimol_utils.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c ccp4/ccp4_mtz_io.cpp -fPIC -DPIC -o ccp4/.libs/ccp4_mtz_io.o
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c minimol/container_minimol.cpp -fPIC -DPIC -o minimol/.libs/container_minimol.o
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o ccp4/ccp4_utils.lo ccp4/ccp4_utils.cpp
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c minimol/minimol_seq.cpp -fPIC -DPIC -o minimol/.libs/minimol_seq.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c minimol/minimol_io.cpp -fPIC -DPIC -o minimol/.libs/minimol_io.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c ccp4/ccp4_mtz_types.cpp -fPIC -DPIC -o ccp4/.libs/ccp4_mtz_types.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c ccp4/ccp4_map_io.cpp -fPIC -DPIC -o ccp4/.libs/ccp4_map_io.o
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c cif/cif_data_io.cpp -fPIC -DPIC -o cif/.libs/cif_data_io.o
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o ccp4/ccp4_utils.lo ccp4/ccp4_utils.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c ccp4/ccp4_utils.cpp -fPIC -DPIC -o ccp4/.libs/ccp4_utils.o
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o cns/cns_hkl_io.lo cns/cns_hkl_io.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o cns/cns_hkl_io.lo cns/cns_hkl_io.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c cns/cns_hkl_io.cpp -fPIC -DPIC -o cns/.libs/cns_hkl_io.o
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o cns/cns_map_io.lo cns/cns_map_io.cpp
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o cns/cns_map_io.lo cns/cns_map_io.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c cns/cns_map_io.cpp -fPIC -DPIC -o cns/.libs/cns_map_io.o
-/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o fortran/f_interface.lo fortran/f_interface.cpp
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o phs/libclipper-phs.la -rpath /usr/lib/x86_64-linux-gnu phs/phs_io.lo core/libclipper-core.la -lm
+/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o fortran/f_interface.lo fortran/f_interface.cpp
+libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c fortran/f_interface.cpp -fPIC -DPIC -o fortran/.libs/f_interface.o
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = unsigned char]':
cns/cns_map_io.cpp:202:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
202 | fgets(buf,512,f);;
@@ -1279,6 +1315,7 @@
cns/cns_map_io.cpp:252:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
252 | fgets(buf,512,f);;
| ~~~~~^~~~~~~~~~~
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o phs/libclipper-phs.la -rpath /usr/lib/x86_64-linux-gnu phs/phs_io.lo core/libclipper-core.la -lm
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = short unsigned int]':
cns/cns_map_io.cpp:202:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
202 | fgets(buf,512,f);;
@@ -1329,7 +1366,6 @@
cns/cns_map_io.cpp:252:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
252 | fgets(buf,512,f);;
| ~~~~~^~~~~~~~~~~
-libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c fortran/f_interface.cpp -fPIC -DPIC -o fortran/.libs/f_interface.o
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = unsigned int]':
cns/cns_map_io.cpp:202:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
202 | fgets(buf,512,f);;
@@ -1677,10 +1713,10 @@
cns/cns_map_io.cpp:544:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
544 | fgets(buf,512,f);; // read slice number line
| ~~~~~^~~~~~~~~~~
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o mmdb/libclipper-mmdb.la -rpath /usr/lib/x86_64-linux-gnu mmdb/clipper_mmdb.lo core/libclipper-core.la -lmmdb2 -lm
cns/cns_map_io.cpp:553:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
553 | fgets(buf,512,f);;
| ~~~~~^~~~~~~~~~~
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o mmdb/libclipper-mmdb.la -rpath /usr/lib/x86_64-linux-gnu mmdb/clipper_mmdb.lo core/libclipper-core.la -lmmdb2 -lm
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o phs/.libs/phs_io.o -Wl,-rpath -Wl,/build/reproducible-path/clipper-2.1.20201109/clipper/core/.libs core/.libs/libclipper-core.so -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-phs.so.2 -o phs/.libs/libclipper-phs.so.2.0.1
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o mmdb/.libs/clipper_mmdb.o -Wl,-rpath -Wl,/build/reproducible-path/clipper-2.1.20201109/clipper/core/.libs core/.libs/libclipper-core.so -lmmdb2 -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-mmdb.so.2 -o mmdb/.libs/libclipper-mmdb.so.2.0.1
libtool: link: (cd "phs/.libs" && rm -f "libclipper-phs.so.2" && ln -s "libclipper-phs.so.2.0.1" "libclipper-phs.so.2")
@@ -1689,27 +1725,27 @@
libtool: link: (cd "mmdb/.libs" && rm -f "libclipper-mmdb.so.2" && ln -s "libclipper-mmdb.so.2.0.1" "libclipper-mmdb.so.2")
libtool: link: (cd "mmdb/.libs" && rm -f "libclipper-mmdb.so" && ln -s "libclipper-mmdb.so.2.0.1" "libclipper-mmdb.so")
libtool: link: ( cd "mmdb/.libs" && rm -f "libclipper-mmdb.la" && ln -s "../libclipper-mmdb.la" "libclipper-mmdb.la" )
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o cif/libclipper-cif.la -rpath /usr/lib/x86_64-linux-gnu cif/cif_data_io.lo core/libclipper-core.la -lmmdb2 -lm
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o cif/libclipper-cif.la -rpath /usr/lib/x86_64-linux-gnu cif/cif_data_io.lo core/libclipper-core.la -lmmdb2 -lm
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o fortran/libclipper-fortran.la -rpath /usr/lib/x86_64-linux-gnu fortran/f_interface.lo core/libclipper-core.la contrib/libclipper-contrib.la -lm
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o cif/.libs/cif_data_io.o -Wl,-rpath -Wl,/build/reproducible-path/clipper-2.1.20201109/clipper/core/.libs core/.libs/libclipper-core.so -lmmdb2 -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-cif.so.2 -o cif/.libs/libclipper-cif.so.2.0.1
+libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o fortran/.libs/f_interface.o -Wl,-rpath -Wl,/build/reproducible-path/clipper-2.1.20201109/clipper/core/.libs -Wl,-rpath -Wl,/build/reproducible-path/clipper-2.1.20201109/clipper/contrib/.libs core/.libs/libclipper-core.so contrib/.libs/libclipper-contrib.so -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-fortran.so.2 -o fortran/.libs/libclipper-fortran.so.2.0.1
libtool: link: (cd "cif/.libs" && rm -f "libclipper-cif.so.2" && ln -s "libclipper-cif.so.2.0.1" "libclipper-cif.so.2")
libtool: link: (cd "cif/.libs" && rm -f "libclipper-cif.so" && ln -s "libclipper-cif.so.2.0.1" "libclipper-cif.so")
-libtool: link: ( cd "cif/.libs" && rm -f "libclipper-cif.la" && ln -s "../libclipper-cif.la" "libclipper-cif.la" )
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o fortran/libclipper-fortran.la -rpath /usr/lib/x86_64-linux-gnu fortran/f_interface.lo core/libclipper-core.la contrib/libclipper-contrib.la -lm
-libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o fortran/.libs/f_interface.o -Wl,-rpath -Wl,/build/reproducible-path/clipper-2.1.20201109/clipper/core/.libs -Wl,-rpath -Wl,/build/reproducible-path/clipper-2.1.20201109/clipper/contrib/.libs core/.libs/libclipper-core.so contrib/.libs/libclipper-contrib.so -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-fortran.so.2 -o fortran/.libs/libclipper-fortran.so.2.0.1
libtool: link: (cd "fortran/.libs" && rm -f "libclipper-fortran.so.2" && ln -s "libclipper-fortran.so.2.0.1" "libclipper-fortran.so.2")
libtool: link: (cd "fortran/.libs" && rm -f "libclipper-fortran.so" && ln -s "libclipper-fortran.so.2.0.1" "libclipper-fortran.so")
+libtool: link: ( cd "cif/.libs" && rm -f "libclipper-cif.la" && ln -s "../libclipper-cif.la" "libclipper-cif.la" )
libtool: link: ( cd "fortran/.libs" && rm -f "libclipper-fortran.la" && ln -s "../libclipper-fortran.la" "libclipper-fortran.la" )
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o minimol/libclipper-minimol.la -rpath /usr/lib/x86_64-linux-gnu minimol/minimol.lo minimol/container_minimol.lo minimol/minimol_data.lo minimol/minimol_io.lo minimol/minimol_seq.lo minimol/minimol_utils.lo core/libclipper-core.la mmdb/libclipper-mmdb.la -lmmdb2 -lm
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o minimol/libclipper-minimol.la -rpath /usr/lib/x86_64-linux-gnu minimol/minimol.lo minimol/container_minimol.lo minimol/minimol_data.lo minimol/minimol_io.lo minimol/minimol_seq.lo minimol/minimol_utils.lo core/libclipper-core.la mmdb/libclipper-mmdb.la -lmmdb2 -lm
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o minimol/.libs/minimol.o minimol/.libs/container_minimol.o minimol/.libs/minimol_data.o minimol/.libs/minimol_io.o minimol/.libs/minimol_seq.o minimol/.libs/minimol_utils.o -Wl,-rpath -Wl,/build/reproducible-path/clipper-2.1.20201109/clipper/core/.libs -Wl,-rpath -Wl,/build/reproducible-path/clipper-2.1.20201109/clipper/mmdb/.libs core/.libs/libclipper-core.so mmdb/.libs/libclipper-mmdb.so -lmmdb2 -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-minimol.so.2 -o minimol/.libs/libclipper-minimol.so.2.0.1
libtool: link: (cd "minimol/.libs" && rm -f "libclipper-minimol.so.2" && ln -s "libclipper-minimol.so.2.0.1" "libclipper-minimol.so.2")
libtool: link: (cd "minimol/.libs" && rm -f "libclipper-minimol.so" && ln -s "libclipper-minimol.so.2.0.1" "libclipper-minimol.so")
libtool: link: ( cd "minimol/.libs" && rm -f "libclipper-minimol.la" && ln -s "../libclipper-minimol.la" "libclipper-minimol.la" )
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o cns/libclipper-cns.la -rpath /usr/lib/x86_64-linux-gnu cns/cns_hkl_io.lo cns/cns_map_io.lo core/libclipper-core.la -lm
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o cns/libclipper-cns.la -rpath /usr/lib/x86_64-linux-gnu cns/cns_hkl_io.lo cns/cns_map_io.lo core/libclipper-core.la -lm
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o cns/.libs/cns_hkl_io.o cns/.libs/cns_map_io.o -Wl,-rpath -Wl,/build/reproducible-path/clipper-2.1.20201109/clipper/core/.libs core/.libs/libclipper-core.so -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-cns.so.2 -o cns/.libs/libclipper-cns.so.2.0.1
libtool: link: (cd "cns/.libs" && rm -f "libclipper-cns.so.2" && ln -s "libclipper-cns.so.2.0.1" "libclipper-cns.so.2")
libtool: link: (cd "cns/.libs" && rm -f "libclipper-cns.so" && ln -s "libclipper-cns.so.2.0.1" "libclipper-cns.so")
libtool: link: ( cd "cns/.libs" && rm -f "libclipper-cns.la" && ln -s "../libclipper-cns.la" "libclipper-cns.la" )
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o ccp4/libclipper-ccp4.la -rpath /usr/lib/x86_64-linux-gnu ccp4/ccp4_mtz_types.lo ccp4/ccp4_mtz_io.lo ccp4/ccp4_map_io.lo ccp4/ccp4_utils.lo core/libclipper-core.la -lccp4c -lm
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o ccp4/libclipper-ccp4.la -rpath /usr/lib/x86_64-linux-gnu ccp4/ccp4_mtz_types.lo ccp4/ccp4_mtz_io.lo ccp4/ccp4_map_io.lo ccp4/ccp4_utils.lo core/libclipper-core.la -lccp4c -lm
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o ccp4/.libs/ccp4_mtz_types.o ccp4/.libs/ccp4_mtz_io.o ccp4/.libs/ccp4_map_io.o ccp4/.libs/ccp4_utils.o -Wl,-rpath -Wl,/build/reproducible-path/clipper-2.1.20201109/clipper/core/.libs core/.libs/libclipper-core.so -lccp4c -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-ccp4.so.2 -o ccp4/.libs/libclipper-ccp4.so.2.0.1
libtool: link: (cd "ccp4/.libs" && rm -f "libclipper-ccp4.so.2" && ln -s "libclipper-ccp4.so.2.0.1" "libclipper-ccp4.so.2")
libtool: link: (cd "ccp4/.libs" && rm -f "libclipper-ccp4.so" && ln -s "libclipper-ccp4.so.2.0.1" "libclipper-ccp4.so")
@@ -1762,46 +1798,46 @@
g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o phstest.o phstest.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -c -o ciftophs.o ciftophs.cpp
f77 -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -c -o ftndemo.o ftndemo.f
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o sgtest sgtest.o ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o symtest symtest.o ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o diffmap diffmap.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o maptest maptest.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o cmaplocal cmaplocal.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/contrib/libclipper-contrib.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o sgtest sgtest.o ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o symtest symtest.o ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o diffmap diffmap.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/sgtest sgtest.o ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/symtest symtest.o ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o sktest sktest.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/contrib/libclipper-contrib.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o maptest maptest.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o cmaplocal cmaplocal.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/contrib/libclipper-contrib.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/diffmap diffmap.o ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o cnstest cnstest.o ../clipper/cns/libclipper-cns.la ../clipper/ccp4/libclipper-ccp4.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/maptest maptest.o ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o maketestdata maketestdata.o ../clipper/mmdb/libclipper-mmdb.la ../clipper/ccp4/libclipper-ccp4.la ../clipper/contrib/libclipper-contrib.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o phstest phstest.o ../clipper/phs/libclipper-phs.la ../clipper/ccp4/libclipper-ccp4.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o ciftophs ciftophs.o ../clipper/phs/libclipper-phs.la ../clipper/cif/libclipper-cif.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o sktest sktest.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/contrib/libclipper-contrib.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o cnstest cnstest.o ../clipper/cns/libclipper-cns.la ../clipper/ccp4/libclipper-ccp4.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o phstest phstest.o ../clipper/phs/libclipper-phs.la ../clipper/ccp4/libclipper-ccp4.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o ftndemo ftndemo.o ../clipper/fortran/libclipper-fortran.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lgfortran -lm -lquadmath -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cmaplocal cmaplocal.o ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/contrib/.libs/libclipper-contrib.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o ftndemo ftndemo.o ../clipper/fortran/libclipper-fortran.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lgfortran -lm -lquadmath -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o ciftophs ciftophs.o ../clipper/phs/libclipper-phs.la ../clipper/cif/libclipper-cif.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o maketestdata maketestdata.o ../clipper/mmdb/libclipper-mmdb.la ../clipper/ccp4/libclipper-ccp4.la ../clipper/contrib/libclipper-contrib.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/sktest sktest.o ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/contrib/.libs/libclipper-contrib.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cnstest cnstest.o ../clipper/cns/.libs/libclipper-cns.so ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o mtztest mtztest.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/maketestdata maketestdata.o ../clipper/mmdb/.libs/libclipper-mmdb.so ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/contrib/.libs/libclipper-contrib.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ftndemo ftndemo.o ../clipper/fortran/.libs/libclipper-fortran.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lgfortran -lm -lquadmath -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/phstest phstest.o ../clipper/phs/.libs/libclipper-phs.so ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ciftophs ciftophs.o ../clipper/phs/.libs/libclipper-phs.so ../clipper/cif/.libs/libclipper-cif.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o mtztest mtztest.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/maketestdata maketestdata.o ../clipper/mmdb/.libs/libclipper-mmdb.so ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/contrib/.libs/libclipper-contrib.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o ffttest ffttest.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/contrib/libclipper-contrib.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/mtztest mtztest.o ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o ccad ccad.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o ffttest ffttest.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/contrib/libclipper-contrib.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o rfltest rfltest.o ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ffttest ffttest.o ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/contrib/.libs/libclipper-contrib.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o rfltest rfltest.o ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o ccad ccad.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/rfltest rfltest.o ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ccad ccad.o ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ffttest ffttest.o ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/contrib/.libs/libclipper-contrib.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o sftest sftest.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/mmdb/libclipper-mmdb.la ../clipper/contrib/libclipper-contrib.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o sftest sftest.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/mmdb/libclipper-mmdb.la ../clipper/contrib/libclipper-contrib.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/sftest sftest.o ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/mmdb/.libs/libclipper-mmdb.so ../clipper/contrib/.libs/libclipper-contrib.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
-/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o cns2mtz cns2mtz.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/mmdb/libclipper-mmdb.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
+/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z,relro -Wl,-z,now -o cns2mtz cns2mtz.o ../clipper/ccp4/libclipper-ccp4.la ../clipper/mmdb/libclipper-mmdb.la ../clipper/core/libclipper-core.la -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cns2mtz cns2mtz.o ../clipper/ccp4/.libs/libclipper-ccp4.so ../clipper/mmdb/.libs/libclipper-mmdb.so ../clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -L/usr/lib/x86_64-linux-gnu -lmmdb2
make[3]: Leaving directory '/build/reproducible-path/clipper-2.1.20201109/examples'
make[2]: Leaving directory '/build/reproducible-path/clipper-2.1.20201109/examples'
make[2]: Entering directory '/build/reproducible-path/clipper-2.1.20201109'
make[2]: Leaving directory '/build/reproducible-path/clipper-2.1.20201109'
make[1]: Leaving directory '/build/reproducible-path/clipper-2.1.20201109'
- rm -fr -- /tmp/dh-xdg-rundir-KY4YSVGF
+ rm -fr -- /tmp/dh-xdg-rundir-Ah2FrEO7
create-stamp debian/debhelper-build-stamp
dh_testroot "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
dh_prep "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
@@ -1817,7 +1853,7 @@
make[3]: Entering directory '/build/reproducible-path/clipper-2.1.20201109/clipper/core'
make[4]: Entering directory '/build/reproducible-path/clipper-2.1.20201109/clipper/core'
/usr/bin/mkdir -p '/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu'
- /bin/bash ../../libtool --mode=install /usr/bin/install -c libclipper-core.la '/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu'
+ /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-core.la '/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu'
libtool: install: /usr/bin/install -c .libs/libclipper-core.so.2.0.1 /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-core.so.2.0.1
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-core.so.2.0.1 libclipper-core.so.2 || { rm -f libclipper-core.so.2 && ln -s libclipper-core.so.2.0.1 libclipper-core.so.2; }; })
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-core.so.2.0.1 libclipper-core.so || { rm -f libclipper-core.so && ln -s libclipper-core.so.2.0.1 libclipper-core.so; }; })
@@ -1832,9 +1868,9 @@
make[3]: Entering directory '/build/reproducible-path/clipper-2.1.20201109/clipper/contrib'
make[4]: Entering directory '/build/reproducible-path/clipper-2.1.20201109/clipper/contrib'
/usr/bin/mkdir -p '/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu'
- /bin/bash ../../libtool --mode=install /usr/bin/install -c libclipper-contrib.la '/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu'
+ /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-contrib.la '/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu'
libtool: warning: relinking 'libclipper-contrib.la'
-libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper/contrib; /bin/bash "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o libclipper-contrib.la -rpath /usr/lib/x86_64-linux-gnu convolution_search.lo sfcalc.lo edcalc.lo sfcalc_obs.lo fffear.lo sfscale.lo function_object_bases.lo sfweight.lo mapfilter.lo skeleton.lo originmatch.lo test_contrib.lo ../core/libclipper-core.la -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
+libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper/contrib; /bin/sh "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o libclipper-contrib.la -rpath /usr/lib/x86_64-linux-gnu convolution_search.lo sfcalc.lo edcalc.lo sfcalc_obs.lo fffear.lo sfscale.lo function_object_bases.lo sfweight.lo mapfilter.lo skeleton.lo originmatch.lo test_contrib.lo ../core/libclipper-core.la -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o .libs/convolution_search.o .libs/sfcalc.o .libs/edcalc.o .libs/sfcalc_obs.o .libs/fffear.o .libs/sfscale.o .libs/function_object_bases.o .libs/sfweight.o .libs/mapfilter.o .libs/skeleton.o .libs/originmatch.o .libs/test_contrib.o -L/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lclipper-core -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-contrib.so.2 -o .libs/libclipper-contrib.so.2.0.1
libtool: install: /usr/bin/install -c .libs/libclipper-contrib.so.2.0.1T /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2.0.1
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-contrib.so.2.0.1 libclipper-contrib.so.2 || { rm -f libclipper-contrib.so.2 && ln -s libclipper-contrib.so.2.0.1 libclipper-contrib.so.2; }; })
@@ -1848,51 +1884,51 @@
make[3]: Entering directory '/build/reproducible-path/clipper-2.1.20201109/clipper'
make[4]: Entering directory '/build/reproducible-path/clipper-2.1.20201109/clipper'
/usr/bin/mkdir -p '/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu'
- /bin/bash ../libtool --mode=install /usr/bin/install -c mmdb/libclipper-mmdb.la minimol/libclipper-minimol.la phs/libclipper-phs.la cif/libclipper-cif.la ccp4/libclipper-ccp4.la cns/libclipper-cns.la fortran/libclipper-fortran.la '/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu'
+ /bin/sh ../libtool --mode=install /usr/bin/install -c mmdb/libclipper-mmdb.la minimol/libclipper-minimol.la phs/libclipper-phs.la cif/libclipper-cif.la ccp4/libclipper-ccp4.la cns/libclipper-cns.la fortran/libclipper-fortran.la '/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu'
libtool: warning: relinking 'mmdb/libclipper-mmdb.la'
-libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/bash "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o mmdb/libclipper-mmdb.la -rpath /usr/lib/x86_64-linux-gnu mmdb/clipper_mmdb.lo core/libclipper-core.la -lmmdb2 -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
+libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/sh "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o mmdb/libclipper-mmdb.la -rpath /usr/lib/x86_64-linux-gnu mmdb/clipper_mmdb.lo core/libclipper-core.la -lmmdb2 -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o mmdb/.libs/clipper_mmdb.o -L/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lclipper-core -lmmdb2 -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-mmdb.so.2 -o mmdb/.libs/libclipper-mmdb.so.2.0.1
libtool: install: /usr/bin/install -c mmdb/.libs/libclipper-mmdb.so.2.0.1T /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-mmdb.so.2.0.1
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-mmdb.so.2.0.1 libclipper-mmdb.so.2 || { rm -f libclipper-mmdb.so.2 && ln -s libclipper-mmdb.so.2.0.1 libclipper-mmdb.so.2; }; })
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-mmdb.so.2.0.1 libclipper-mmdb.so || { rm -f libclipper-mmdb.so && ln -s libclipper-mmdb.so.2.0.1 libclipper-mmdb.so; }; })
libtool: install: /usr/bin/install -c mmdb/.libs/libclipper-mmdb.lai /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-mmdb.la
libtool: warning: relinking 'minimol/libclipper-minimol.la'
-libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/bash "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o minimol/libclipper-minimol.la -rpath /usr/lib/x86_64-linux-gnu minimol/minimol.lo minimol/container_minimol.lo minimol/minimol_data.lo minimol/minimol_io.lo minimol/minimol_seq.lo minimol/minimol_utils.lo core/libclipper-core.la mmdb/libclipper-mmdb.la -lmmdb2 -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
+libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/sh "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o minimol/libclipper-minimol.la -rpath /usr/lib/x86_64-linux-gnu minimol/minimol.lo minimol/container_minimol.lo minimol/minimol_data.lo minimol/minimol_io.lo minimol/minimol_seq.lo minimol/minimol_utils.lo core/libclipper-core.la mmdb/libclipper-mmdb.la -lmmdb2 -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o minimol/.libs/minimol.o minimol/.libs/container_minimol.o minimol/.libs/minimol_data.o minimol/.libs/minimol_io.o minimol/.libs/minimol_seq.o minimol/.libs/minimol_utils.o -L/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lclipper-core -lclipper-mmdb -lmmdb2 -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-minimol.so.2 -o minimol/.libs/libclipper-minimol.so.2.0.1
libtool: install: /usr/bin/install -c minimol/.libs/libclipper-minimol.so.2.0.1T /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-minimol.so.2.0.1
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-minimol.so.2.0.1 libclipper-minimol.so.2 || { rm -f libclipper-minimol.so.2 && ln -s libclipper-minimol.so.2.0.1 libclipper-minimol.so.2; }; })
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-minimol.so.2.0.1 libclipper-minimol.so || { rm -f libclipper-minimol.so && ln -s libclipper-minimol.so.2.0.1 libclipper-minimol.so; }; })
libtool: install: /usr/bin/install -c minimol/.libs/libclipper-minimol.lai /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-minimol.la
libtool: warning: relinking 'phs/libclipper-phs.la'
-libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/bash "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o phs/libclipper-phs.la -rpath /usr/lib/x86_64-linux-gnu phs/phs_io.lo core/libclipper-core.la -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
+libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/sh "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o phs/libclipper-phs.la -rpath /usr/lib/x86_64-linux-gnu phs/phs_io.lo core/libclipper-core.la -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o phs/.libs/phs_io.o -L/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lclipper-core -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-phs.so.2 -o phs/.libs/libclipper-phs.so.2.0.1
libtool: install: /usr/bin/install -c phs/.libs/libclipper-phs.so.2.0.1T /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-phs.so.2.0.1
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-phs.so.2.0.1 libclipper-phs.so.2 || { rm -f libclipper-phs.so.2 && ln -s libclipper-phs.so.2.0.1 libclipper-phs.so.2; }; })
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-phs.so.2.0.1 libclipper-phs.so || { rm -f libclipper-phs.so && ln -s libclipper-phs.so.2.0.1 libclipper-phs.so; }; })
libtool: install: /usr/bin/install -c phs/.libs/libclipper-phs.lai /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-phs.la
libtool: warning: relinking 'cif/libclipper-cif.la'
-libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/bash "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o cif/libclipper-cif.la -rpath /usr/lib/x86_64-linux-gnu cif/cif_data_io.lo core/libclipper-core.la -lmmdb2 -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
+libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/sh "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o cif/libclipper-cif.la -rpath /usr/lib/x86_64-linux-gnu cif/cif_data_io.lo core/libclipper-core.la -lmmdb2 -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o cif/.libs/cif_data_io.o -L/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lclipper-core -lmmdb2 -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-cif.so.2 -o cif/.libs/libclipper-cif.so.2.0.1
libtool: install: /usr/bin/install -c cif/.libs/libclipper-cif.so.2.0.1T /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-cif.so.2.0.1
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-cif.so.2.0.1 libclipper-cif.so.2 || { rm -f libclipper-cif.so.2 && ln -s libclipper-cif.so.2.0.1 libclipper-cif.so.2; }; })
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-cif.so.2.0.1 libclipper-cif.so || { rm -f libclipper-cif.so && ln -s libclipper-cif.so.2.0.1 libclipper-cif.so; }; })
libtool: install: /usr/bin/install -c cif/.libs/libclipper-cif.lai /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-cif.la
libtool: warning: relinking 'ccp4/libclipper-ccp4.la'
-libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/bash "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o ccp4/libclipper-ccp4.la -rpath /usr/lib/x86_64-linux-gnu ccp4/ccp4_mtz_types.lo ccp4/ccp4_mtz_io.lo ccp4/ccp4_map_io.lo ccp4/ccp4_utils.lo core/libclipper-core.la -lccp4c -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
+libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/sh "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o ccp4/libclipper-ccp4.la -rpath /usr/lib/x86_64-linux-gnu ccp4/ccp4_mtz_types.lo ccp4/ccp4_mtz_io.lo ccp4/ccp4_map_io.lo ccp4/ccp4_utils.lo core/libclipper-core.la -lccp4c -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o ccp4/.libs/ccp4_mtz_types.o ccp4/.libs/ccp4_mtz_io.o ccp4/.libs/ccp4_map_io.o ccp4/.libs/ccp4_utils.o -L/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lclipper-core -lccp4c -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-ccp4.so.2 -o ccp4/.libs/libclipper-ccp4.so.2.0.1
libtool: install: /usr/bin/install -c ccp4/.libs/libclipper-ccp4.so.2.0.1T /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2.0.1
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-ccp4.so.2.0.1 libclipper-ccp4.so.2 || { rm -f libclipper-ccp4.so.2 && ln -s libclipper-ccp4.so.2.0.1 libclipper-ccp4.so.2; }; })
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-ccp4.so.2.0.1 libclipper-ccp4.so || { rm -f libclipper-ccp4.so && ln -s libclipper-ccp4.so.2.0.1 libclipper-ccp4.so; }; })
libtool: install: /usr/bin/install -c ccp4/.libs/libclipper-ccp4.lai /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-ccp4.la
libtool: warning: relinking 'cns/libclipper-cns.la'
-libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/bash "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o cns/libclipper-cns.la -rpath /usr/lib/x86_64-linux-gnu cns/cns_hkl_io.lo cns/cns_map_io.lo core/libclipper-core.la -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
+libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/sh "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o cns/libclipper-cns.la -rpath /usr/lib/x86_64-linux-gnu cns/cns_hkl_io.lo cns/cns_map_io.lo core/libclipper-core.la -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o cns/.libs/cns_hkl_io.o cns/.libs/cns_map_io.o -L/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lclipper-core -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-cns.so.2 -o cns/.libs/libclipper-cns.so.2.0.1
libtool: install: /usr/bin/install -c cns/.libs/libclipper-cns.so.2.0.1T /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-cns.so.2.0.1
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-cns.so.2.0.1 libclipper-cns.so.2 || { rm -f libclipper-cns.so.2 && ln -s libclipper-cns.so.2.0.1 libclipper-cns.so.2; }; })
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-cns.so.2.0.1 libclipper-cns.so || { rm -f libclipper-cns.so && ln -s libclipper-cns.so.2.0.1 libclipper-cns.so; }; })
libtool: install: /usr/bin/install -c cns/.libs/libclipper-cns.lai /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-cns.la
libtool: warning: relinking 'fortran/libclipper-fortran.la'
-libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/bash "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o fortran/libclipper-fortran.la -rpath /usr/lib/x86_64-linux-gnu fortran/f_interface.lo core/libclipper-core.la contrib/libclipper-contrib.la -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
+libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/clipper; /bin/sh "/build/reproducible-path/clipper-2.1.20201109/libtool" --tag CXX --mode=relink g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu++98 -version-info 2:1 -Wl,-z,relro -Wl,-z,now -o fortran/libclipper-fortran.la -rpath /usr/lib/x86_64-linux-gnu fortran/f_interface.lo core/libclipper-core.la contrib/libclipper-contrib.la -lm -inst-prefix-dir /build/reproducible-path/clipper-2.1.20201109/debian/tmp)
libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o fortran/.libs/f_interface.o -L/build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lclipper-core -lclipper-contrib -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/clipper-2.1.20201109=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libclipper-fortran.so.2 -o fortran/.libs/libclipper-fortran.so.2.0.1
libtool: install: /usr/bin/install -c fortran/.libs/libclipper-fortran.so.2.0.1T /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu/libclipper-fortran.so.2.0.1
libtool: install: (cd /build/reproducible-path/clipper-2.1.20201109/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libclipper-fortran.so.2.0.1 libclipper-fortran.so.2 || { rm -f libclipper-fortran.so.2 && ln -s libclipper-fortran.so.2.0.1 libclipper-fortran.so.2; }; })
@@ -1952,15 +1988,15 @@
install -m0755 -d debian/libclipper-doc/usr/share/doc-base/
install -p -m0644 debian/libclipper-doc.doc-base debian/libclipper-doc/usr/share/doc-base/libclipper-doc.clipper
dh_installchangelogs "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
- install -m0755 -d debian/libclipper-dev/usr/share/doc/libclipper-dev
- install -p -m0644 debian/.debhelper/generated/libclipper-dev/dh_installchangelogs.dch.trimmed debian/libclipper-dev/usr/share/doc/libclipper-dev/changelog.Debian
- install -p -m0644 ./ChangeLog debian/libclipper-dev/usr/share/doc/libclipper-dev/changelog
install -m0755 -d debian/libclipper2/usr/share/doc/libclipper2
install -p -m0644 debian/.debhelper/generated/libclipper2/dh_installchangelogs.dch.trimmed debian/libclipper2/usr/share/doc/libclipper2/changelog.Debian
install -p -m0644 ./ChangeLog debian/libclipper2/usr/share/doc/libclipper2/changelog
install -m0755 -d debian/libclipper-doc/usr/share/doc/libclipper-doc
install -p -m0644 debian/.debhelper/generated/libclipper-doc/dh_installchangelogs.dch.trimmed debian/libclipper-doc/usr/share/doc/libclipper-doc/changelog.Debian
install -p -m0644 ./ChangeLog debian/libclipper-doc/usr/share/doc/libclipper-doc/changelog
+ install -m0755 -d debian/libclipper-dev/usr/share/doc/libclipper-dev
+ install -p -m0644 debian/.debhelper/generated/libclipper-dev/dh_installchangelogs.dch.trimmed debian/libclipper-dev/usr/share/doc/libclipper-dev/changelog.Debian
+ install -p -m0644 ./ChangeLog debian/libclipper-dev/usr/share/doc/libclipper-dev/changelog
dh_installexamples "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
install -m0755 -d debian/libclipper-doc/usr/share/doc/libclipper-dev/examples
cp --reflink=auto -a ./examples/c2test.cpp debian/libclipper-doc/usr/share/doc/libclipper-dev/examples
@@ -1999,222 +2035,222 @@
install -p -m0644 debian/libclipper2.lintian-overrides debian/libclipper2/usr/share/lintian/overrides/libclipper2
dh_perl "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
dh_link "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
- rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-phs.so
- ln -s libclipper-phs.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-phs.so
+ rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so
+ ln -s libclipper-ccp4.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so
rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-cns.so
ln -s libclipper-cns.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-cns.so
+ rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-phs.so
+ ln -s libclipper-phs.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-phs.so
rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-contrib.so
ln -s libclipper-contrib.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-contrib.so
+ rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-cif.so
+ ln -s libclipper-cif.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-cif.so
+ rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-core.so
+ ln -s libclipper-core.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-core.so
rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-mmdb.so
ln -s libclipper-mmdb.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-mmdb.so
- rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so
- ln -s libclipper-ccp4.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so
rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-minimol.so
ln -s libclipper-minimol.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-minimol.so
rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-fortran.so
ln -s libclipper-fortran.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-fortran.so
- rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-cif.so
- ln -s libclipper-cif.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-cif.so
- rm -f debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-core.so
- ln -s libclipper-core.so.2.0.1 debian/libclipper-dev/usr/lib/x86_64-linux-gnu/libclipper-core.so
- rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2
- ln -s libclipper-ccp4.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2
- rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-fortran.so.2
- ln -s libclipper-fortran.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-fortran.so.2
- rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-core.so.2
- ln -s libclipper-core.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-core.so.2
rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cif.so.2
ln -s libclipper-cif.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cif.so.2
+ rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-fortran.so.2
+ ln -s libclipper-fortran.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-fortran.so.2
rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cns.so.2
ln -s libclipper-cns.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cns.so.2
- rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2
- ln -s libclipper-contrib.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2
- rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-minimol.so.2
- ln -s libclipper-minimol.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-minimol.so.2
rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-phs.so.2
ln -s libclipper-phs.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-phs.so.2
rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-mmdb.so.2
ln -s libclipper-mmdb.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-mmdb.so.2
+ rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2
+ ln -s libclipper-contrib.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2
+ rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-minimol.so.2
+ ln -s libclipper-minimol.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-minimol.so.2
+ rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-core.so.2
+ ln -s libclipper-core.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-core.so.2
+ rm -f debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2
+ ln -s libclipper-ccp4.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2
dh_strip_nondeterminism "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
Using 1687186854 as canonical time
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_ad.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Spgr__descr_1_1Symop__codes.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/open.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__fatal.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__expcubic.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1ABCD.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Datatype__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1NXmap.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1NXmap__base_1_1Map__reference__coord.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__sigmaa.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1NXmap__base_1_1Map__reference__index.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CCell.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__scaleLogI1I2.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/map_p2.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_sd.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_hd.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Coord__map.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__meanFnth.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1Phi__fom.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1AtomShapeFn.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Range__sampling.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Test__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1Flag__bool.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1NX__operator.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__scaleLogF1F2.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/closed.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CNXmap__operator.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1RTop__orth.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1HKL__info_1_1HKL__reference__coord.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1HKL__data__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_s.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/map_p1.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1FFTmap__sparse__p1__xh.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1I__sigI__ano.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Matrix.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/splitbard.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CNXmap.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Spgr__descr.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__meanEnth.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CSpacegroup.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1RTop.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Atom__list.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__scaleF1F2.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Xmap__base_1_1Map__reference__index.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1U__aniso__frac.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/nav_hd.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1E__sigE__ano.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Array2d.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Mat33sym.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__fatal.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_hd.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CCell.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Spgr__descr_1_1Symop__codes.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1FFTmap__sparse__p1__base.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Xmap__base_1_1Map__reference__coord.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1HKL__info_1_1HKL__reference__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/nav_f.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Coord__reci__orth.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1ResolutionFn.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_ad.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Xmap__base.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Generic__ordinal.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1HKL__info.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Coord__reci__frac.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/hkl_objs.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Grad__orth.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/sync_on.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Matrix.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1HKL__data__base.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/nav_hd.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/splitbard.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1E__sigE.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__scaleLogI1I2.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Coord__map.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__generic.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1F__sigF__ano.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Grad__map.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Curv__orth.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Atom__list.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Coord__grid.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Property__base.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1NXmap__base_1_1Map__reference__index.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1I__sigI__ano.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__binner.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Vec3.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Grid.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CXmap.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Ramachandran.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1E__sigE.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Resolution__ordinal.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1F__sigF.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__linear.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Spacegroup.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/nav_h.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Grid__sampling.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1NXmap__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__warn.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Coord__orth.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1D__sigD.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_a.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1FFTmap.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__meanEnth.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1FFTmap__sparse__p1__hx.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1String.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/hierarchy.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CResolution.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Coord__grid.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__spline.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1I__sigI.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Curv__orth.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/sync_off.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__info.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1AtomSF.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__log__aniso__gaussian.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_b.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1Phi__fom.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1RTop__orth.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1U__aniso__orth.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Grid__range.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Test__core.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CGrid__sampling.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Coord__frac.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Curv__frac.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__generic.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Container.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/include.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__log__gaussian.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Coord__reci__orth.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Coord__reci__frac.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_h.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Generic__ordinal.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Resolution.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/map_p1.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/open.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Ramachandran.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__warn.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Grid__range.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Grid__sampling.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Cell.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/nav_g.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/include.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/map_p2.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1HKL__info_1_1HKL__reference__index.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1ResolutionFn__nonlinear.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Xmap.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Spgr__descr.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_sd.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Container.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Spacegroup.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_s.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Test__core.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Prob__phi__2d.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_a.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/nav_fd.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__info.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1NXmap__operator.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Cell.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Property__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Isymop.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Symop.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Histogram.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1D__sigD.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__dtor.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1ABCD.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CSpacegroup.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1FFTmap.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CGrid__sampling.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Mat33sym.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/hkl_objs.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_b.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1NXmap__base_1_1Map__reference__coord.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1ResolutionFn.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__aniso__gaussian.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1E__sigE__ano.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Property.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__scaleI1I2.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__base.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Xmap__base_1_1Map__reference__index.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Datatype__base.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CResolution.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1RTop.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1U__aniso__frac.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CNXmap.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__meanFnth.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Xmap__base_1_1Map__reference__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1Flag.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1RTop__frac.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1NXmap__operator.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CHKL__info.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Prob__phi__2d.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__sigmaa__omegaa.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/splitbar.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1HKL__info_1_1HKL__reference__index.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Curv__map.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/bc_sd.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__scaleEsq.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1Flag__bool.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1Flag.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Curv__frac.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1HKL.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1NXmap.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1HKL__data.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Coord__frac.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/nav_f.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1NXmap__base_1_1Map__reference__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Cell__descr.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__aniso__gaussian.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Vec3.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__scaleLogF1F2.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Range__sampling.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__sigmaa.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Grad__frac.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__binner.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1F__sigF.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Histogram.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1FFTmap__p1.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CNXmap__operator.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1HKL__info_1_1HKL__reference__base.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Resolution.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/sync_on.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Symop.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/splitbar.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__scaleF1F2.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Curv__map.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__linear.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CHKL__data.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__base.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__ctor.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Cell__descr.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__base.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/sync_off.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1AtomShapeFn.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Grad__orth.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1F__phi.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1HKL__data__cacheobj.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/bc_sd.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Coord__orth.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/hierarchy.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1NXmap__base.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__scaleEsq.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Grad__map.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/nav_h.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Test__base.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Resolution__ordinal.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Array2d.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__gaussian.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/closed.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1FFTmap__sparse__p1__xh.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1TargetFn__sigmaa__omegaa.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/bc_s.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Isymop.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/tab_bd.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1AtomSF.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__spline.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Property.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Xmap__base.png using File::StripNondeterminism::handlers::png
+ Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__expcubic.png using File::StripNondeterminism::handlers::png
Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1FFTmap__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1HKL__data.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1BasisFn__log__gaussian.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/bc_s.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__dtor.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1CHKL__data.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1ResolutionFn__nonlinear.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Xmap.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Grid.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1FFTmap__p1.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1FFTmap__sparse__p1__base.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1RTop__frac.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1datatypes_1_1F__phi.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1Message__ctor.png using File::StripNondeterminism::handlers::png
- Normalizing debian/libclipper-doc/usr/share/doc/libclipper-dev/html/classclipper_1_1FFTmap__sparse__p1__hx.png using File::StripNondeterminism::handlers::png
dh_compress "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
- cd debian/libclipper-dev
cd debian/libclipper2
+ cd debian/libclipper-dev
cd debian/libclipper-doc
+ chmod a-x usr/share/doc/libclipper2/changelog usr/share/doc/libclipper2/changelog.Debian
chmod a-x usr/share/doc/libclipper-dev/changelog usr/share/doc/libclipper-dev/changelog.Debian
+ gzip -9nf usr/share/doc/libclipper2/changelog usr/share/doc/libclipper2/changelog.Debian
gzip -9nf usr/share/doc/libclipper-dev/changelog usr/share/doc/libclipper-dev/changelog.Debian
- chmod a-x usr/share/doc/libclipper2/changelog usr/share/doc/libclipper2/changelog.Debian
chmod a-x usr/share/doc/libclipper-doc/changelog usr/share/doc/libclipper-doc/changelog.Debian
+ gzip -9nf usr/share/doc/libclipper-doc/changelog usr/share/doc/libclipper-doc/changelog.Debian
cd '/build/reproducible-path/clipper-2.1.20201109'
- gzip -9nf usr/share/doc/libclipper2/changelog usr/share/doc/libclipper2/changelog.Debian
cd '/build/reproducible-path/clipper-2.1.20201109'
- gzip -9nf usr/share/doc/libclipper-doc/changelog usr/share/doc/libclipper-doc/changelog.Debian
cd '/build/reproducible-path/clipper-2.1.20201109'
dh_fixperms "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
+ find debian/libclipper-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libclipper2 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libclipper-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
- find debian/libclipper-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libclipper2/usr/share/doc -type f -a -true -a ! -regex 'debian/libclipper2/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
- find debian/libclipper-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/libclipper-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libclipper-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libclipper-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
+ find debian/libclipper-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/libclipper-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libclipper2/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libclipper-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libclipper2/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
- find debian/libclipper2 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
- find debian/libclipper-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libclipper-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
+ find debian/libclipper-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
+ find debian/libclipper2 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
+ find debian/libclipper-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libclipper2/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
find debian/libclipper-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
- find debian/libclipper-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libclipper-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
dh_missing "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
dh_dwz -a "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
@@ -2223,36 +2259,21 @@
objcopy --compress-debug-sections debian/libclipper2/usr/lib/debug/.dwz/x86_64-linux-gnu/libclipper2.debug
chmod 0644 -- debian/libclipper2/usr/lib/debug/.dwz/x86_64-linux-gnu/libclipper2.debug
dh_strip -a "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
- install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/f6
- objcopy --only-keep-debug --compress-debug-sections debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cns.so.2.0.1 debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/f6/78d3d428f3d1e8722fe2236177e43f4610e3d5.debug
- chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/f6/78d3d428f3d1e8722fe2236177e43f4610e3d5.debug
- strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cns.so.2.0.1
- objcopy --add-gnu-debuglink debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/f6/78d3d428f3d1e8722fe2236177e43f4610e3d5.debug debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cns.so.2.0.1
- install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/83
- objcopy --only-keep-debug --compress-debug-sections debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cif.so.2.0.1 debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/83/04fa95f336b4b25975d45d9f22cccff7f076fe.debug
- chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/83/04fa95f336b4b25975d45d9f22cccff7f076fe.debug
- strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cif.so.2.0.1
- objcopy --add-gnu-debuglink debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/83/04fa95f336b4b25975d45d9f22cccff7f076fe.debug debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cif.so.2.0.1
- install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/8a
- objcopy --only-keep-debug --compress-debug-sections debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2.0.1 debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/8a/ef14a47a1eecc24e03a820fc4e1dfcd2413acd.debug
- chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/8a/ef14a47a1eecc24e03a820fc4e1dfcd2413acd.debug
- strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2.0.1
- objcopy --add-gnu-debuglink debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/8a/ef14a47a1eecc24e03a820fc4e1dfcd2413acd.debug debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2.0.1
- install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/b0
- objcopy --only-keep-debug --compress-debug-sections debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2.0.1 debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/b0/d18c195109ddccf17453d4c6c0e4e29fde0e51.debug
- chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/b0/d18c195109ddccf17453d4c6c0e4e29fde0e51.debug
- strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2.0.1
- objcopy --add-gnu-debuglink debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/b0/d18c195109ddccf17453d4c6c0e4e29fde0e51.debug debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2.0.1
install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/12
objcopy --only-keep-debug --compress-debug-sections debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-minimol.so.2.0.1 debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/12/c5f37031a2a745c02ba1dc0b00bd2ab66038af.debug
chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/12/c5f37031a2a745c02ba1dc0b00bd2ab66038af.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-minimol.so.2.0.1
objcopy --add-gnu-debuglink debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/12/c5f37031a2a745c02ba1dc0b00bd2ab66038af.debug debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-minimol.so.2.0.1
- install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/15
- objcopy --only-keep-debug --compress-debug-sections debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-phs.so.2.0.1 debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/15/9dfe2bcd498b33f5c4448e8125ff6129285fa4.debug
- chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/15/9dfe2bcd498b33f5c4448e8125ff6129285fa4.debug
- strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-phs.so.2.0.1
- objcopy --add-gnu-debuglink debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/15/9dfe2bcd498b33f5c4448e8125ff6129285fa4.debug debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-phs.so.2.0.1
+ install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/b0
+ objcopy --only-keep-debug --compress-debug-sections debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2.0.1 debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/b0/d18c195109ddccf17453d4c6c0e4e29fde0e51.debug
+ chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/b0/d18c195109ddccf17453d4c6c0e4e29fde0e51.debug
+ strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2.0.1
+ objcopy --add-gnu-debuglink debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/b0/d18c195109ddccf17453d4c6c0e4e29fde0e51.debug debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2.0.1
+ install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/83
+ objcopy --only-keep-debug --compress-debug-sections debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cif.so.2.0.1 debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/83/04fa95f336b4b25975d45d9f22cccff7f076fe.debug
+ chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/83/04fa95f336b4b25975d45d9f22cccff7f076fe.debug
+ strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cif.so.2.0.1
+ objcopy --add-gnu-debuglink debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/83/04fa95f336b4b25975d45d9f22cccff7f076fe.debug debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cif.so.2.0.1
install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/39
objcopy --only-keep-debug --compress-debug-sections debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-core.so.2.0.1 debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/39/25f5bbbb0ca3b43b025ef860e089ee70bdf336.debug
chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/39/25f5bbbb0ca3b43b025ef860e089ee70bdf336.debug
@@ -2268,6 +2289,21 @@
chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/c6/79db19c06f57738c5788eae4848bec7cfa4987.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-fortran.so.2.0.1
objcopy --add-gnu-debuglink debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/c6/79db19c06f57738c5788eae4848bec7cfa4987.debug debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-fortran.so.2.0.1
+ install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/15
+ objcopy --only-keep-debug --compress-debug-sections debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-phs.so.2.0.1 debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/15/9dfe2bcd498b33f5c4448e8125ff6129285fa4.debug
+ chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/15/9dfe2bcd498b33f5c4448e8125ff6129285fa4.debug
+ strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-phs.so.2.0.1
+ objcopy --add-gnu-debuglink debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/15/9dfe2bcd498b33f5c4448e8125ff6129285fa4.debug debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-phs.so.2.0.1
+ install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/f6
+ objcopy --only-keep-debug --compress-debug-sections debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cns.so.2.0.1 debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/f6/78d3d428f3d1e8722fe2236177e43f4610e3d5.debug
+ chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/f6/78d3d428f3d1e8722fe2236177e43f4610e3d5.debug
+ strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cns.so.2.0.1
+ objcopy --add-gnu-debuglink debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/f6/78d3d428f3d1e8722fe2236177e43f4610e3d5.debug debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cns.so.2.0.1
+ install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/8a
+ objcopy --only-keep-debug --compress-debug-sections debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2.0.1 debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/8a/ef14a47a1eecc24e03a820fc4e1dfcd2413acd.debug
+ chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/8a/ef14a47a1eecc24e03a820fc4e1dfcd2413acd.debug
+ strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2.0.1
+ objcopy --add-gnu-debuglink debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.build-id/8a/ef14a47a1eecc24e03a820fc4e1dfcd2413acd.debug debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2.0.1
install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.dwz
cp --reflink=auto -a debian/libclipper2/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/libclipper2/dbgsym-root/usr/lib/debug/.dwz
rm -fr debian/libclipper2/usr/lib/debug/.dwz
@@ -2292,17 +2328,13 @@
mv debian/.debhelper/generated/libclipper2/triggers.new debian/.debhelper/generated/libclipper2/triggers
dh_shlibdeps -a "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
install -m0755 -d debian/libclipper2/DEBIAN
- dpkg-shlibdeps -Tdebian/libclipper2.substvars debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cns.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cif.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-minimol.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-phs.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-core.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-mmdb.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-fortran.so.2.0.1
+ dpkg-shlibdeps -Tdebian/libclipper2.substvars debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-minimol.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-ccp4.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cif.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-core.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-mmdb.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-fortran.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-phs.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-cns.so.2.0.1 debian/libclipper2/usr/lib/x86_64-linux-gnu/libclipper-contrib.so.2.0.1
dh_installdeb "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
install -m0755 -d debian/libclipper-dev/DEBIAN
install -m0755 -d debian/libclipper2/DEBIAN
install -p -m0644 debian/.debhelper/generated/libclipper2/triggers debian/libclipper2/DEBIAN/triggers
install -m0755 -d debian/libclipper-doc/DEBIAN
dh_gencontrol "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
- install -m0755 -d debian/libclipper-dev/DEBIAN
- echo misc:Depends= >> debian/libclipper-dev.substvars
- echo misc:Pre-Depends= >> debian/libclipper-dev.substvars
- dpkg-gencontrol -plibclipper-dev -ldebian/changelog -Tdebian/libclipper-dev.substvars -cdebian/control -Pdebian/libclipper-dev
install -m0755 -d debian/libclipper-doc/DEBIAN
echo misc:Depends= >> debian/libclipper-doc.substvars
echo misc:Pre-Depends= >> debian/libclipper-doc.substvars
@@ -2312,15 +2344,19 @@
echo misc:Pre-Depends= >> debian/libclipper2.substvars
install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/DEBIAN
dpkg-gencontrol -plibclipper2 -ldebian/changelog -Tdebian/libclipper2.substvars -cdebian/control -Pdebian/.debhelper/libclipper2/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libclipper2-dbgsym "-DDepends=libclipper2 (= \${binary:Version})" "-DDescription=debug symbols for libclipper2" "-DBuild-Ids=12c5f37031a2a745c02ba1dc0b00bd2ab66038af 159dfe2bcd498b33f5c4448e8125ff6129285fa4 3925f5bbbb0ca3b43b025ef860e089ee70bdf336 8304fa95f336b4b25975d45d9f22cccff7f076fe 8aef14a47a1eecc24e03a820fc4e1dfcd2413acd b0d18c195109ddccf17453d4c6c0e4e29fde0e51 c679db19c06f57738c5788eae4848bec7cfa4987 de2327d1cbd02c1e795edf12f1331500bd8981be f678d3d428f3d1e8722fe2236177e43f4610e3d5" -DSection=debug "-DReplaces=libclipper2-dbg (<< 2.1.20160809-1~)" "-DBreaks=libclipper2-dbg (<< 2.1.20160809-1~)"
+ install -m0755 -d debian/libclipper-dev/DEBIAN
+ echo misc:Depends= >> debian/libclipper-dev.substvars
+ echo misc:Pre-Depends= >> debian/libclipper-dev.substvars
+ dpkg-gencontrol -plibclipper-dev -ldebian/changelog -Tdebian/libclipper-dev.substvars -cdebian/control -Pdebian/libclipper-dev
chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/DEBIAN/control
dpkg-gencontrol -plibclipper2 -ldebian/changelog -Tdebian/libclipper2.substvars -cdebian/control -Pdebian/libclipper2
chmod 0644 -- debian/libclipper-dev/DEBIAN/control
chmod 0644 -- debian/libclipper-doc/DEBIAN/control
chmod 0644 -- debian/libclipper2/DEBIAN/control
dh_md5sums "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
+ install -m0755 -d debian/libclipper-dev/DEBIAN
install -m0755 -d debian/libclipper2/DEBIAN
install -m0755 -d debian/libclipper-doc/DEBIAN
- install -m0755 -d debian/libclipper-dev/DEBIAN
cd debian/libclipper2 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
cd debian/libclipper-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
cd debian/libclipper-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
@@ -2328,16 +2364,16 @@
chmod 0644 -- debian/libclipper2/DEBIAN/md5sums
install -m0755 -d debian/.debhelper/libclipper2/dbgsym-root/DEBIAN
cd debian/.debhelper/libclipper2/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
- chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/DEBIAN/md5sums
chmod 0644 -- debian/libclipper-doc/DEBIAN/md5sums
+ chmod 0644 -- debian/.debhelper/libclipper2/dbgsym-root/DEBIAN/md5sums
dh_builddeb "-O--ddeb-migration=libclipper2-dbg (<< 2.1.20160809-1~)"
dpkg-deb --root-owner-group --build debian/libclipper-dev ..
- dpkg-deb --root-owner-group --build debian/.debhelper/libclipper2/dbgsym-root ..
dpkg-deb --root-owner-group --build debian/libclipper2 ..
dpkg-deb --root-owner-group --build debian/libclipper-doc ..
+ dpkg-deb --root-owner-group --build debian/.debhelper/libclipper2/dbgsym-root ..
dpkg-deb: building package 'libclipper2' in '../libclipper2_2.1.20201109-2_amd64.deb'.
-dpkg-deb: building package 'libclipper2-dbgsym' in '../libclipper2-dbgsym_2.1.20201109-2_amd64.deb'.
dpkg-deb: building package 'libclipper-dev' in '../libclipper-dev_2.1.20201109-2_amd64.deb'.
+dpkg-deb: building package 'libclipper2-dbgsym' in '../libclipper2-dbgsym_2.1.20201109-2_amd64.deb'.
dpkg-deb: building package 'libclipper-doc' in '../libclipper-doc_2.1.20201109-2_all.deb'.
dpkg-genbuildinfo --build=binary -O../clipper_2.1.20201109-2_amd64.buildinfo
dpkg-genchanges --build=binary -O../clipper_2.1.20201109-2_amd64.changes
@@ -2346,12 +2382,14 @@
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
+I: user script /srv/workspace/pbuilder/2276755/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/2276755/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
-I: removing directory /srv/workspace/pbuilder/1334275 and its subdirectories
-I: Current time: Thu May 7 06:38:45 -12 2026
-I: pbuilder-time-stamp: 1778179125
+I: removing directory /srv/workspace/pbuilder/2276755 and its subdirectories
+I: Current time: Sat Apr 5 02:17:15 +14 2025
+I: pbuilder-time-stamp: 1743769035