Diff of the two buildlogs: -- --- b1/build.log 2024-12-19 07:15:15.423592867 +0000 +++ b2/build.log 2024-12-19 07:18:26.386939460 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Dec 18 19:11:02 -12 2024 -I: pbuilder-time-stamp: 1734592262 +I: Current time: Thu Jan 22 03:38:17 +14 2026 +I: pbuilder-time-stamp: 1769002697 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -28,52 +28,84 @@ dpkg-source: info: applying update_doc.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2398028/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3155878/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 21 13:38 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3155878/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3155878/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='570910cec45f4616a1346149f725f530' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2398028' - PS1='# ' - PS2='> ' + INVOCATION_ID=e4284a2e9fab4acd964f62da8151b85b + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3155878 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.HxM2ZIOX/pbuilderrc_rgco --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.HxM2ZIOX/b1 --logfile b1/build.log alter-sequence-alignment_1.3.4-8.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.HxM2ZIOX/pbuilderrc_rA9V --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.HxM2ZIOX/b2 --logfile b2/build.log alter-sequence-alignment_1.3.4-8.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.1.0-28-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2398028/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3155878/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -496,7 +528,7 @@ Get: 367 http://deb.debian.org/debian trixie/main amd64 unzip amd64 6.0-28 [166 kB] Get: 368 http://deb.debian.org/debian trixie/main amd64 maven-debian-helper all 2.6.6 [108 kB] Get: 369 http://deb.debian.org/debian trixie/main amd64 rename all 2.02-1 [21.8 kB] -Fetched 275 MB in 18s (14.9 MB/s) +Fetched 275 MB in 26s (10.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19959 files and directories currently installed.) @@ -1714,8 +1746,8 @@ Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Dec 19 07:12:47 UTC 2024. -Universal Time is now: Thu Dec 19 07:12:47 UTC 2024. +Local time is now: Wed Jan 21 13:40:48 UTC 2026. +Universal Time is now: Wed Jan 21 13:40:48 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:amd64 (1.17.0-2+b1) ... @@ -2220,7 +2252,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/alter-sequence-alignment-1.3.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../alter-sequence-alignment_1.3.4-8_source.changes +I: user script /srv/workspace/pbuilder/3155878/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/3155878/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/alter-sequence-alignment-1.3.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../alter-sequence-alignment_1.3.4-8_source.changes dpkg-buildpackage: info: source package alter-sequence-alignment dpkg-buildpackage: info: source version 1.3.4-8 dpkg-buildpackage: info: source distribution unstable @@ -2233,7 +2269,7 @@ bash -c "for dir in \$(find . -name target -type d); do if [ -f \$(echo \$dir | sed -e s/target\$/pom.xml/) ]; then rm -Rf \$dir; fi done" mh_unpatchpoms -palter-sequence-alignment jh_clean -Duplicate specification "u=s" for option "u" +Duplicate specification "unlink|u" for option "u" dh_clean debian/rules binary dh binary --with javahelper @@ -2305,13 +2341,13 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for The ALTER Project 1.3.4: [INFO] -[INFO] The ALTER Project .................................. SUCCESS [ 0.003 s] -[INFO] ALTER Core Library and Desktop app ................. SUCCESS [ 8.984 s] +[INFO] The ALTER Project .................................. SUCCESS [ 0.002 s] +[INFO] ALTER Core Library and Desktop app ................. SUCCESS [ 3.566 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 9.143 s -[INFO] Finished at: 2024-12-18T19:14:48-12:00 +[INFO] Total time: 3.650 s +[INFO] Finished at: 2026-01-22T03:41:14+14:00 [INFO] ------------------------------------------------------------------------ markdown README.md > README.html make[1]: Leaving directory '/build/reproducible-path/alter-sequence-alignment-1.3.4' @@ -2358,13 +2394,13 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for The ALTER Project 1.3.4: [INFO] -[INFO] The ALTER Project .................................. SUCCESS [ 0.004 s] -[INFO] ALTER Core Library and Desktop app ................. SUCCESS [ 1.867 s] +[INFO] The ALTER Project .................................. SUCCESS [ 0.002 s] +[INFO] ALTER Core Library and Desktop app ................. SUCCESS [ 0.693 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 2.057 s -[INFO] Finished at: 2024-12-18T19:14:52-12:00 +[INFO] Total time: 0.777 s +[INFO] Finished at: 2026-01-22T03:41:16+14:00 [INFO] ------------------------------------------------------------------------ create-stamp debian/debhelper-build-stamp dh_prep @@ -2405,13 +2441,13 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for The ALTER Project 1.3.4: [INFO] -[INFO] The ALTER Project .................................. SUCCESS [ 0.540 s] -[INFO] ALTER Core Library and Desktop app ................. SUCCESS [ 0.061 s] +[INFO] The ALTER Project .................................. SUCCESS [ 0.267 s] +[INFO] ALTER Core Library and Desktop app ................. SUCCESS [ 0.032 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 0.799 s -[INFO] Finished at: 2024-12-18T19:14:56-12:00 +[INFO] Total time: 0.404 s +[INFO] Finished at: 2026-01-22T03:41:18+14:00 [INFO] ------------------------------------------------------------------------ mh_resolve_dependencies --non-interactive --offline --build -palter-sequence-alignment --base-directory=/build/reproducible-path/alter-sequence-alignment-1.3.4 --non-explore Analysing pom.xml... @@ -2452,12 +2488,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3155878/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3155878/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2398028 and its subdirectories -I: Current time: Wed Dec 18 19:15:14 -12 2024 -I: pbuilder-time-stamp: 1734592514 +I: removing directory /srv/workspace/pbuilder/3155878 and its subdirectories +I: Current time: Thu Jan 22 03:41:25 +14 2026 +I: pbuilder-time-stamp: 1769002885