Diff of the two buildlogs: -- --- b1/build.log 2025-11-28 10:13:06.389491024 +0000 +++ b2/build.log 2025-11-28 10:14:59.445621736 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Dec 31 04:33:21 -12 2026 -I: pbuilder-time-stamp: 1798734801 +I: Current time: Sat Nov 29 00:13:07 +14 2025 +I: pbuilder-time-stamp: 1764324787 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration @@ -24,52 +24,84 @@ dpkg-source: info: applying locale-sensitive.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3771558/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/714614/tmp/hooks/D01_modify_environment starting +debug: Running on infom01-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 28 10:13 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/714614/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/714614/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 nocheck' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='8988a168a4ad4fa7a04a97da42a63eca' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3771558' - PS1='# ' - PS2='> ' + INVOCATION_ID=e09cbc8e1e5d40189de3aa196486756e + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=714614 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.DRz5yMAh/pbuilderrc_4rKe --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.DRz5yMAh/b1 --logfile b1/build.log biomaj3-download_3.2.12-2.dsc' - SUDO_GID='109' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.DRz5yMAh/pbuilderrc_Sk9q --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.DRz5yMAh/b2 --logfile b2/build.log biomaj3-download_3.2.12-2.dsc' + SUDO_GID=109 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom02-amd64 6.12.57+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.57-1 (2025-11-05) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.57+deb13-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.57-1 (2025-11-05) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3771558/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/714614/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -285,7 +317,7 @@ Get: 130 http://deb.debian.org/debian forky/main amd64 python3-simpleeval all 1.0.3-1 [24.0 kB] Get: 131 http://deb.debian.org/debian forky/main amd64 python3-tenacity all 9.1.2-2 [46.2 kB] Get: 132 http://deb.debian.org/debian forky/main amd64 python3-yaml amd64 6.0.2-2 [137 kB] -Fetched 32.9 MB in 5s (6565 kB/s) +Fetched 32.9 MB in 1s (50.1 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19866 files and directories currently installed.) @@ -717,8 +749,8 @@ Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Dec 31 16:34:54 UTC 2026. -Universal Time is now: Thu Dec 31 16:34:54 UTC 2026. +Local time is now: Fri Nov 28 10:14:30 UTC 2025. +Universal Time is now: Fri Nov 28 10:14:30 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... @@ -875,7 +907,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/biomaj3-download-3.2.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../biomaj3-download_3.2.12-2_source.changes +I: user script /srv/workspace/pbuilder/714614/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/714614/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/biomaj3-download-3.2.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../biomaj3-download_3.2.12-2_source.changes dpkg-buildpackage: info: source package biomaj3-download dpkg-buildpackage: info: source version 3.2.12-2 dpkg-buildpackage: info: source distribution unstable @@ -893,8 +929,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - This deprecation is overdue, please update your project and remove deprecated - calls to avoid build errors in the future. + By 2026-Mar-03, you need to update your project and remove deprecated calls + or your builds will no longer be supported. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -911,8 +947,8 @@ versions. Please use the underscore name 'description_file' instead. (Affected: biomaj_download). - This deprecation is overdue, please update your project and remove deprecated - calls to avoid build errors in the future. + By 2026-Mar-03, you need to update your project and remove deprecated calls + or your builds will no longer be supported. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -959,8 +995,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - This deprecation is overdue, please update your project and remove deprecated - calls to avoid build errors in the future. + By 2026-Mar-03, you need to update your project and remove deprecated calls + or your builds will no longer be supported. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -977,8 +1013,8 @@ versions. Please use the underscore name 'description_file' instead. (Affected: biomaj_download). - This deprecation is overdue, please update your project and remove deprecated - calls to avoid build errors in the future. + By 2026-Mar-03, you need to update your project and remove deprecated calls + or your builds will no longer be supported. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1012,8 +1048,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - This deprecation is overdue, please update your project and remove deprecated - calls to avoid build errors in the future. + By 2026-Mar-03, you need to update your project and remove deprecated calls + or your builds will no longer be supported. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1030,8 +1066,8 @@ versions. Please use the underscore name 'description_file' instead. (Affected: biomaj_download). - This deprecation is overdue, please update your project and remove deprecated - calls to avoid build errors in the future. + By 2026-Mar-03, you need to update your project and remove deprecated calls + or your builds will no longer be supported. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1055,22 +1091,22 @@ running build_py creating /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download copying biomaj_download/downloadclient.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download -copying biomaj_download/downloadservice.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download -copying biomaj_download/biomaj_download_web.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download copying biomaj_download/wsgi.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download +copying biomaj_download/downloadservice.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download copying biomaj_download/__init__.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download +copying biomaj_download/biomaj_download_web.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download +creating /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/message +copying biomaj_download/message/downmessage_pb2.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/message +copying biomaj_download/message/__init__.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/message creating /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download -copying biomaj_download/download/interface.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download -copying biomaj_download/download/curl.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download -copying biomaj_download/download/rsync.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download -copying biomaj_download/download/__init__.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download copying biomaj_download/download/localcopy.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download -copying biomaj_download/download/direct.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download copying biomaj_download/download/downloadthreads.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download copying biomaj_download/download/protocolirods.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download -creating /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/message -copying biomaj_download/message/downmessage_pb2.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/message -copying biomaj_download/message/__init__.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/message +copying biomaj_download/download/rsync.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download +copying biomaj_download/download/curl.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download +copying biomaj_download/download/direct.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download +copying biomaj_download/download/__init__.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download +copying biomaj_download/download/interface.py -> /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download running egg_info creating biomaj_download.egg-info writing biomaj_download.egg-info/PKG-INFO @@ -1088,100 +1124,6 @@ copying and adjusting bin/biomaj_download_consumer.py -> build/scripts-3.13 changing mode of build/scripts-3.13/biomaj_download_consumer.py from 644 to 755 make[1]: Leaving directory '/build/reproducible-path/biomaj3-download-3.2.12' - debian/rules override_dh_auto_test -make[1]: Entering directory '/build/reproducible-path/biomaj3-download-3.2.12' -LOCAL_IRODS=0 NETWORK=0 python3 -m pytest -v tests/biomaj_tests.py -============================= test session starts ============================== -platform linux -- Python 3.13.9, pytest-8.4.2, pluggy-1.6.0 -- /usr/bin/python3 -cachedir: .pytest_cache -rootdir: /build/reproducible-path/biomaj3-download-3.2.12 -plugins: typeguard-4.4.4, anyio-4.11.0 -collecting ... collected 61 items - -tests/biomaj_tests.py::TestDownloadInterface::test_retry_parsing PASSED [ 1%] -tests/biomaj_tests.py::TestBiomajLocalDownload::test_local_list PASSED [ 3%] -tests/biomaj_tests.py::TestBiomajLocalDownload::test_local_list_error PASSED [ 4%] -tests/biomaj_tests.py::TestBiomajLocalDownload::test_local_download PASSED [ 6%] -tests/biomaj_tests.py::TestBiomajLocalDownload::test_local_download_in_subdir PASSED [ 8%] -tests/biomaj_tests.py::TestBiomajLocalDownload::test_local_download_hardlinks PASSED [ 9%] -tests/biomaj_tests.py::TestBiomajHTTPDownload::test_http_list SKIPPED [ 11%] -tests/biomaj_tests.py::TestBiomajHTTPDownload::test_http_list_error SKIPPED [ 13%] -tests/biomaj_tests.py::TestBiomajHTTPDownload::test_http_list_dateregexp SKIPPED [ 14%] -tests/biomaj_tests.py::TestBiomajHTTPDownload::test_http_download_no_size SKIPPED [ 16%] -tests/biomaj_tests.py::TestBiomajHTTPDownload::test_http_download_no_date SKIPPED [ 18%] -tests/biomaj_tests.py::TestBiomajHTTPDownload::test_http_download SKIPPED [ 19%] -tests/biomaj_tests.py::TestBiomajHTTPDownload::test_http_download_in_subdir SKIPPED [ 21%] -tests/biomaj_tests.py::TestBiomajHTTPDownload::test_redirection SKIPPED [ 22%] -tests/biomaj_tests.py::TestBiomajHTTPSDownload::test_download SKIPPED [ 24%] -tests/biomaj_tests.py::TestBiomajSFTPDownload::test_list_error SKIPPED [ 26%] -tests/biomaj_tests.py::TestBiomajSFTPDownload::test_download SKIPPED [ 27%] -tests/biomaj_tests.py::TestBiomajDirectFTPDownload::test_ftp_list SKIPPED [ 29%] -tests/biomaj_tests.py::TestBiomajDirectFTPDownload::test_ftp_list_error SKIPPED [ 31%] -tests/biomaj_tests.py::TestBiomajDirectFTPDownload::test_download SKIPPED [ 32%] -tests/biomaj_tests.py::TestBiomajDirectFTPSDownload::test_ftps_list SKIPPED [ 34%] -tests/biomaj_tests.py::TestBiomajDirectFTPSDownload::test_download SKIPPED [ 36%] -tests/biomaj_tests.py::TestBiomajDirectHTTPDownload::test_http_list SKIPPED [ 37%] -tests/biomaj_tests.py::TestBiomajDirectHTTPDownload::test_http_list_error SKIPPED [ 39%] -tests/biomaj_tests.py::TestBiomajDirectHTTPDownload::test_download SKIPPED [ 40%] -tests/biomaj_tests.py::TestBiomajDirectHTTPDownload::test_download_get_params_save_as SKIPPED [ 42%] -tests/biomaj_tests.py::TestBiomajDirectHTTPDownload::test_download_save_as SKIPPED [ 44%] -tests/biomaj_tests.py::TestBiomajDirectHTTPDownload::test_download_post_params SKIPPED [ 45%] -tests/biomaj_tests.py::TestBiomajDirectHTTPDownload::test_redirection SKIPPED [ 47%] -tests/biomaj_tests.py::TestBiomajFTPDownload::test_ftp_list SKIPPED [ 49%] -tests/biomaj_tests.py::TestBiomajFTPDownload::test_ftp_list_error SKIPPED [ 50%] -tests/biomaj_tests.py::TestBiomajFTPDownload::test_download SKIPPED [ 52%] -tests/biomaj_tests.py::TestBiomajFTPDownload::test_download_skip_check_uncompress SKIPPED [ 54%] -tests/biomaj_tests.py::TestBiomajFTPDownload::test_download_in_subdir SKIPPED [ 55%] -tests/biomaj_tests.py::TestBiomajFTPDownload::test_download_or_copy SKIPPED [ 57%] -tests/biomaj_tests.py::TestBiomajFTPDownload::test_download_or_copy_directhttp SKIPPED [ 59%] -tests/biomaj_tests.py::TestBiomajFTPDownload::test_get_more_recent_file SKIPPED [ 60%] -tests/biomaj_tests.py::TestBiomajFTPDownload::test_download_retry SKIPPED [ 62%] -tests/biomaj_tests.py::TestBiomajFTPDownload::test_ms_server SKIPPED [ 63%] -tests/biomaj_tests.py::TestBiomajFTPDownload::test_download_tcp_keepalive SKIPPED [ 65%] -tests/biomaj_tests.py::TestBiomajFTPDownload::test_download_ftp_method SKIPPED [ 67%] -tests/biomaj_tests.py::TestBiomajFTPSDownload::test_ftps_list SKIPPED [ 68%] -tests/biomaj_tests.py::TestBiomajFTPSDownload::test_ftps_list_error SKIPPED [ 70%] -tests/biomaj_tests.py::TestBiomajFTPSDownload::test_download SKIPPED [ 72%] -tests/biomaj_tests.py::TestBiomajFTPSDownload::test_ftps_list_no_ssl SKIPPED [ 73%] -tests/biomaj_tests.py::TestBiomajFTPSDownload::test_download_no_ssl SKIPPED [ 75%] -tests/biomaj_tests.py::TestBiomajFTPSDownload::test_download_ssl_certificate SKIPPED [ 77%] -tests/biomaj_tests.py::TestBiomajRSYNCDownload::test_rsync_list PASSED [ 78%] -tests/biomaj_tests.py::TestBiomajRSYNCDownload::test_rsync_list_error PASSED [ 80%] -tests/biomaj_tests.py::TestBiomajRSYNCDownload::test_rsync_match PASSED [ 81%] -tests/biomaj_tests.py::TestBiomajRSYNCDownload::test_rsync_download PASSED [ 83%] -tests/biomaj_tests.py::TestBiomajRSYNCDownload::test_rsync_general_download PASSED [ 85%] -tests/biomaj_tests.py::TestBiomajRSYNCDownload::test_rsync_download_or_copy PASSED [ 86%] -tests/biomaj_tests.py::TestBiomajRSYNCDownload::test_rsync_download_in_subdir PASSED [ 88%] -tests/biomaj_tests.py::TestBiomajRSYNCDownload::test_rsync_download_skip_check_uncompress PASSED [ 90%] -tests/biomaj_tests.py::TestBiomajRSYNCDownload::test_rsync_download_retry PASSED [ 91%] -tests/biomaj_tests.py::TestBiomajIRODSDownload::test_irods_list SKIPPED [ 93%] -tests/biomaj_tests.py::TestBiomajLocalIRODSDownload::test_irods_download SKIPPED [ 95%] -tests/biomaj_tests.py::TestBiomajLocalIRODSDownload::test_irods_download_retry SKIPPED [ 96%] -tests/biomaj_tests.py::TestBiomajLocalIRODSDownload::test_irods_download_skip_check_uncompress SKIPPED [ 98%] -tests/biomaj_tests.py::TestBiomajLocalIRODSDownload::test_irods_list_error SKIPPED [100%] - -=============================== warnings summary =============================== -tests/biomaj_tests.py:453 - /build/reproducible-path/biomaj3-download-3.2.12/tests/biomaj_tests.py:453: SyntaxWarning: invalid escape sequence '\s' - "[\w\-\.]+.tar.gz)<\/a>[\s]+([0-9]{2}-[A-Za-z]{3}-[0-9]{4}[\s][0-9]{2}:[0-9]{2})[\s]+([0-9]+[A-Za-z])", - -tests/biomaj_tests.py:454 - /build/reproducible-path/biomaj3-download-3.2.12/tests/biomaj_tests.py:454: SyntaxWarning: invalid escape sequence '\s' - "([\w\-\.]+.tar.gz)<\/a>[\s]+([0-9]{2}-[A-Za-z]{3}-[0-9]{4}[\s][0-9]{2}:[0-9]{2})[\s]+([0-9]+[A-Za-z])", - -../../../usr/lib/python3/dist-packages/biomaj_core/utils.py:11 - /usr/lib/python3/dist-packages/biomaj_core/utils.py:11: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html - import pkg_resources - -tests/biomaj_tests.py::TestBiomajRSYNCDownload::test_rsync_download -tests/biomaj_tests.py::TestBiomajRSYNCDownload::test_rsync_download_in_subdir -tests/biomaj_tests.py::TestBiomajRSYNCDownload::test_rsync_download_in_subdir - /usr/lib/python3/dist-packages/biomaj_core/utils.py:428: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead - logger.warn("archive_check: unable to process check call for '" + str(archivefile) + "'") - --- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html -================= 15 passed, 46 skipped, 6 warnings in 25.86s ================== -make[1]: Leaving directory '/build/reproducible-path/biomaj3-download-3.2.12' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild @@ -1195,8 +1137,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - This deprecation is overdue, please update your project and remove deprecated - calls to avoid build errors in the future. + By 2026-Mar-03, you need to update your project and remove deprecated calls + or your builds will no longer be supported. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1213,8 +1155,8 @@ versions. Please use the underscore name 'description_file' instead. (Affected: biomaj_download). - This deprecation is overdue, please update your project and remove deprecated - calls to avoid build errors in the future. + By 2026-Mar-03, you need to update your project and remove deprecated calls + or your builds will no longer be supported. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1265,38 +1207,38 @@ running install_lib creating /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages creating /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download +creating /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/message +copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/message/downmessage_pb2.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/message +copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/message/__init__.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/message copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/downloadclient.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download +copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/wsgi.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/downloadservice.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download creating /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download -copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/interface.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download -copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/curl.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download -copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/rsync.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download -copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/__init__.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/localcopy.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download -copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/direct.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/downloadthreads.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/protocolirods.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download -copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/biomaj_download_web.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download -copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/wsgi.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download +copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/rsync.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download +copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/curl.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download +copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/direct.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download +copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/__init__.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download +copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/download/interface.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/__init__.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download -creating /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/message -copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/message/downmessage_pb2.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/message -copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/message/__init__.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/message +copying /build/reproducible-path/biomaj3-download-3.2.12/.pybuild/cpython3_3.13_biomaj-download/build/biomaj_download/biomaj_download_web.py -> /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download +byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/message/downmessage_pb2.py to downmessage_pb2.cpython-313.pyc +byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/message/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/downloadclient.py to downloadclient.cpython-313.pyc +byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/wsgi.py to wsgi.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/downloadservice.py to downloadservice.cpython-313.pyc -byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/interface.py to interface.cpython-313.pyc -byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/curl.py to curl.cpython-313.pyc -byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/rsync.py to rsync.cpython-313.pyc -byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/localcopy.py to localcopy.cpython-313.pyc -byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/direct.py to direct.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/downloadthreads.py to downloadthreads.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/protocolirods.py to protocolirods.cpython-313.pyc -byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/biomaj_download_web.py to biomaj_download_web.cpython-313.pyc -byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/wsgi.py to wsgi.cpython-313.pyc +byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/rsync.py to rsync.cpython-313.pyc +byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/curl.py to curl.cpython-313.pyc +byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/direct.py to direct.cpython-313.pyc +byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/download/interface.py to interface.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/__init__.py to __init__.cpython-313.pyc -byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/message/downmessage_pb2.py to downmessage_pb2.cpython-313.pyc -byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/message/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download/biomaj_download_web.py to biomaj_download_web.cpython-313.pyc running install_egg_info Copying biomaj_download.egg-info to /build/reproducible-path/biomaj3-download-3.2.12/debian/python3-biomaj3-download/usr/lib/python3.13/dist-packages/biomaj_download-3.2.12.egg-info Skipping SOURCES.txt @@ -1333,12 +1275,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/714614/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/714614/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3771558 and its subdirectories -I: Current time: Thu Dec 31 04:36:05 -12 2026 -I: pbuilder-time-stamp: 1798734965 +I: removing directory /srv/workspace/pbuilder/714614 and its subdirectories +I: Current time: Sat Nov 29 00:14:58 +14 2025 +I: pbuilder-time-stamp: 1764324898