Diff of the two buildlogs: -- --- b1/build.log 2024-12-27 08:28:00.189958791 +0000 +++ b2/build.log 2024-12-27 08:29:59.224536002 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Dec 26 20:25:13 -12 2024 -I: pbuilder-time-stamp: 1735287913 +I: Current time: Fri Jan 30 04:51:03 +14 2026 +I: pbuilder-time-stamp: 1769698263 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/experimental-reproducible-base.tgz] I: copying local configuration @@ -16,57 +16,93 @@ I: copying [./r-bioc-rcpi_1.42.0+ds.orig.tar.xz] I: copying [./r-bioc-rcpi_1.42.0+ds-1.debian.tar.xz] I: Extracting source -dpkg-source: warning: cannot verify inline signature for ./r-bioc-rcpi_1.42.0+ds-1.dsc: unsupported subcommand +gpgv: Signature made Fri Nov 29 13:20:06 2024 +gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 +gpgv: issuer "crusoe@debian.org" +gpgv: Can't check signature: No public key +dpkg-source: warning: cannot verify inline signature for ./r-bioc-rcpi_1.42.0+ds-1.dsc: no acceptable signature found dpkg-source: info: extracting r-bioc-rcpi in r-bioc-rcpi-1.42.0+ds dpkg-source: info: unpacking r-bioc-rcpi_1.42.0+ds.orig.tar.xz dpkg-source: info: unpacking r-bioc-rcpi_1.42.0+ds-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3040321/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/648091/tmp/hooks/D01_modify_environment starting +debug: Running on infom02-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 29 14:51 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/648091/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/648091/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='experimental' - HOME='/root' - HOST_ARCH='amd64' + DIRSTACK=() + DISTRIBUTION=experimental + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='ae545eeb001d487db5d00a3441fa15c8' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3040321' - PS1='# ' - PS2='> ' + INVOCATION_ID=f4b83fe3a8f34c9789b715bf7ebc8bf7 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=648091 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.3Q26kpT3/pbuilderrc_NfWJ --distribution experimental --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/experimental-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.3Q26kpT3/b1 --logfile b1/build.log r-bioc-rcpi_1.42.0+ds-1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.3Q26kpT3/pbuilderrc_FJfh --distribution experimental --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/experimental-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.3Q26kpT3/b2 --logfile b2/build.log r-bioc-rcpi_1.42.0+ds-1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom01-amd64 6.1.0-28-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.11.10+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.10-1~bpo12+1 (2024-12-19) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3040321/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/648091/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -79,7 +115,7 @@ Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-biostrings, r-bioc-gosemsim, r-cran-curl, r-cran-doparallel, r-cran-foreach, r-cran-httr2, r-cran-jsonlite, r-cran-rlang, pkgconf, r-bioc-pwalign dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. -(Reading database ... 19858 files and directories currently installed.) +(Reading database ... 19980 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: @@ -120,11 +156,11 @@ pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: - autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} groff-base{a} icu-devtools{a} intltool-debian{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgnutls30t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-0{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libp11-kit0{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper2{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libreadline-dev{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libswitch-perl{a} libtasn1-6{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libunistring5{a} liburi-perl{a} libuv1t64{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6t64{a} littler{a} m4{a} man-db{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} r-base-core{a} r-base-dev{a} r-bioc-annotationdbi{a} r-bioc-biobase{a} r-bioc-biocgenerics{a} r-bioc-biostrings{a} r-bioc-genomeinfodb{a} r-bioc-genomeinfodbdata{a} r-bioc-go.db{a} r-bioc-gosemsim{a} r-bioc-iranges{a} r-bioc-keggrest{a} r-bioc-pwalign{a} r-bioc-s4vectors{a} r-bioc-ucsc.utils{a} r-bioc-xvector{a} r-bioc-zlibbioc{a} r-cran-askpass{a} r-cran-bit{a} r-cran-bit64{a} r-cran-blob{a} r-cran-cachem{a} r-cran-cli{a} r-cran-codetools{a} r-cran-cpp11{a} r-cran-crayon{a} r-cran-curl{a} r-cran-dbi{a} r-cran-digest{a} r-cran-doparallel{a} r-cran-fastmap{a} r-cran-foreach{a} r-cran-fs{a} r-cran-glue{a} r-cran-httr{a} r-cran-httr2{a} r-cran-iterators{a} r-cran-jsonlite{a} r-cran-lifecycle{a} r-cran-littler{a} r-cran-magrittr{a} r-cran-memoise{a} r-cran-mime{a} r-cran-openssl{a} r-cran-pkgconfig{a} r-cran-pkgkitten{a} r-cran-plogr{a} r-cran-png{a} r-cran-r.methodss3{a} r-cran-r.oo{a} r-cran-r.utils{a} r-cran-r6{a} r-cran-rappdirs{a} r-cran-rcpp{a} r-cran-rlang{a} r-cran-rsqlite{a} r-cran-sys{a} r-cran-vctrs{a} r-cran-withr{a} r-cran-yulab.utils{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} + autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} groff-base{a} icu-devtools{a} intltool-debian{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper2{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libreadline-dev{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libswitch-perl{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libuv1t64{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6t64{a} littler{a} m4{a} man-db{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} r-base-core{a} r-base-dev{a} r-bioc-annotationdbi{a} r-bioc-biobase{a} r-bioc-biocgenerics{a} r-bioc-biostrings{a} r-bioc-genomeinfodb{a} r-bioc-genomeinfodbdata{a} r-bioc-go.db{a} r-bioc-gosemsim{a} r-bioc-iranges{a} r-bioc-keggrest{a} r-bioc-pwalign{a} r-bioc-s4vectors{a} r-bioc-ucsc.utils{a} r-bioc-xvector{a} r-bioc-zlibbioc{a} r-cran-askpass{a} r-cran-bit{a} r-cran-bit64{a} r-cran-blob{a} r-cran-cachem{a} r-cran-cli{a} r-cran-codetools{a} r-cran-cpp11{a} r-cran-crayon{a} r-cran-curl{a} r-cran-dbi{a} r-cran-digest{a} r-cran-doparallel{a} r-cran-fastmap{a} r-cran-foreach{a} r-cran-fs{a} r-cran-glue{a} r-cran-httr{a} r-cran-httr2{a} r-cran-iterators{a} r-cran-jsonlite{a} r-cran-lifecycle{a} r-cran-littler{a} r-cran-magrittr{a} r-cran-memoise{a} r-cran-mime{a} r-cran-openssl{a} r-cran-pkgconfig{a} r-cran-pkgkitten{a} r-cran-plogr{a} r-cran-png{a} r-cran-r.methodss3{a} r-cran-r.oo{a} r-cran-r.utils{a} r-cran-r6{a} r-cran-rappdirs{a} r-cran-rcpp{a} r-cran-rlang{a} r-cran-rsqlite{a} r-cran-sys{a} r-cran-vctrs{a} r-cran-withr{a} r-cran-yulab.utils{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage krb5-locales libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libio-compress-brotli-perl libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libx11-protocol-perl linux-sysctl-defaults lynx psmisc publicsuffix r-cran-bench r-cran-brio r-cran-callr r-cran-caret r-cran-clipr r-cran-covr r-cran-dbitest r-cran-decor r-cran-desc r-cran-docopt r-cran-dplyr r-cran-generics r-cran-gert r-cran-ggplot2 r-cran-gh r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-jpeg r-cran-knitr r-cran-later r-cran-lintr r-cran-lobstr r-cran-mlbench r-cran-mockery r-cran-pillar r-cran-pkgdown r-cran-processx r-cran-progress r-cran-promises r-cran-ps r-cran-r.rsp r-cran-readr r-cran-rmarkdown r-cran-rpart r-cran-rprojroot r-cran-rstudioapi r-cran-runit r-cran-rvest r-cran-scales r-cran-sf r-cran-sodium r-cran-spelling r-cran-testthat r-cran-tibble r-cran-tidyverse r-cran-usethis r-cran-waldo r-cran-webfakes r-cran-webutils r-cran-whoami r-cran-xml2 r-cran-zeallot r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs -0 packages upgraded, 253 newly installed, 0 to remove and 0 not upgraded. -Need to get 181 MB of archives. After unpacking 507 MB will be used. +0 packages upgraded, 247 newly installed, 0 to remove and 0 not upgraded. +Need to get 178 MB of archives. After unpacking 498 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-4 [256 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] @@ -157,232 +193,226 @@ Get: 29 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 30 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] -Get: 32 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-1 [476 kB] -Get: 33 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] -Get: 34 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] -Get: 35 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-3 [1600 kB] -Get: 36 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] -Get: 37 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] -Get: 38 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.22 [919 kB] -Get: 39 http://deb.debian.org/debian unstable/main amd64 zip amd64 3.0-14 [233 kB] -Get: 40 http://deb.debian.org/debian unstable/main amd64 unzip amd64 6.0-28 [166 kB] -Get: 41 http://deb.debian.org/debian unstable/main amd64 libpaper2 amd64 2.2.5-0.3 [16.3 kB] -Get: 42 http://deb.debian.org/debian unstable/main amd64 libpaper-utils amd64 2.2.5-0.3 [16.1 kB] -Get: 43 http://deb.debian.org/debian unstable/main amd64 xdg-utils all 1.2.1-2 [75.8 kB] -Get: 44 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-4 [152 kB] -Get: 45 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] -Get: 46 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] -Get: 47 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.44-3 [280 kB] -Get: 48 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] -Get: 49 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] -Get: 50 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] -Get: 51 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] -Get: 52 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB] -Get: 53 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] -Get: 54 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] -Get: 55 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] -Get: 56 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] -Get: 57 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] -Get: 58 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] -Get: 59 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] -Get: 60 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] -Get: 61 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] -Get: 62 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b3 [27.8 kB] -Get: 63 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] -Get: 64 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] -Get: 65 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2~rc1-2 [23.8 kB] -Get: 66 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] -Get: 67 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] -Get: 68 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] -Get: 69 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] -Get: 70 http://deb.debian.org/debian unstable/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB] -Get: 71 http://deb.debian.org/debian unstable/main amd64 libffi8 amd64 3.4.6-1 [23.6 kB] -Get: 72 http://deb.debian.org/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB] -Get: 73 http://deb.debian.org/debian unstable/main amd64 libtasn1-6 amd64 4.19.0-3+b3 [49.5 kB] -Get: 74 http://deb.debian.org/debian unstable/main amd64 libgnutls30t64 amd64 3.8.8-2 [1454 kB] -Get: 75 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] -Get: 76 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] -Get: 77 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.19+dfsg-1 [187 kB] -Get: 78 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] -Get: 79 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] -Get: 80 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] -Get: 81 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] -Get: 82 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.1-1 [351 kB] -Get: 83 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] -Get: 84 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.4-1 [1501 kB] -Get: 85 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] -Get: 86 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-11 [836 kB] -Get: 87 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB] -Get: 88 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1+b1 [463 kB] -Get: 89 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB] -Get: 90 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] -Get: 91 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.1.0-1 [478 kB] -Get: 92 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] -Get: 93 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3+b1 [38.1 kB] -Get: 94 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2+b1 [49.4 kB] -Get: 95 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.55.0+ds-3 [225 kB] -Get: 96 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.55.0+ds-3 [54.6 kB] -Get: 97 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.55.0+ds-3 [35.4 kB] -Get: 98 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] -Get: 99 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1042 kB] -Get: 100 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] -Get: 101 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] -Get: 102 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB] -Get: 103 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB] -Get: 104 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] -Get: 105 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] -Get: 106 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] -Get: 107 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b3 [54.6 kB] -Get: 108 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB] -Get: 109 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b2 [17.0 kB] -Get: 110 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.15-1 [791 kB] -Get: 111 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] -Get: 112 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] -Get: 113 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b1 [188 kB] -Get: 114 http://deb.debian.org/debian unstable/main amd64 r-base-core amd64 4.4.2-1 [28.3 MB] -Get: 115 http://deb.debian.org/debian unstable/main amd64 libgfortran-14-dev amd64 14.2.0-11 [881 kB] -Get: 116 http://deb.debian.org/debian unstable/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-11 [11.7 MB] -Get: 117 http://deb.debian.org/debian unstable/main amd64 gfortran-14 amd64 14.2.0-11 [13.2 kB] -Get: 118 http://deb.debian.org/debian unstable/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1 [1284 B] -Get: 119 http://deb.debian.org/debian unstable/main amd64 gfortran amd64 4:14.2.0-1 [1436 B] -Get: 120 http://deb.debian.org/debian unstable/main amd64 libblas-dev amd64 3.12.0-4 [161 kB] -Get: 121 http://deb.debian.org/debian unstable/main amd64 liblapack-dev amd64 3.12.0-4 [4991 kB] -Get: 122 http://deb.debian.org/debian unstable/main amd64 libncurses6 amd64 6.5-2+b1 [105 kB] -Get: 123 http://deb.debian.org/debian unstable/main amd64 libncurses-dev amd64 6.5-2+b1 [351 kB] -Get: 124 http://deb.debian.org/debian unstable/main amd64 libreadline-dev amd64 8.2-6 [153 kB] -Get: 125 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3+b1 [292 kB] -Get: 126 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3+b1 [72.2 kB] -Get: 127 http://deb.debian.org/debian unstable/main amd64 libpcre2-16-0 amd64 10.44-5 [260 kB] -Get: 128 http://deb.debian.org/debian unstable/main amd64 libpcre2-32-0 amd64 10.44-5 [248 kB] -Get: 129 http://deb.debian.org/debian unstable/main amd64 libpcre2-posix3 amd64 10.44-5 [60.4 kB] -Get: 130 http://deb.debian.org/debian unstable/main amd64 libpcre2-dev amd64 10.44-5 [790 kB] -Get: 131 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] -Get: 132 http://deb.debian.org/debian unstable/main amd64 libpng-dev amd64 1.6.44-3 [366 kB] -Get: 133 http://deb.debian.org/debian unstable/main amd64 libbz2-dev amd64 1.0.8-6 [31.4 kB] -Get: 134 http://deb.debian.org/debian unstable/main amd64 liblzma-dev amd64 5.6.3-1+b1 [316 kB] -Get: 135 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 72.1-5+b1 [210 kB] -Get: 136 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 72.1-5+b1 [10.4 MB] -Get: 137 http://deb.debian.org/debian unstable/main amd64 libxmuu1 amd64 2:1.1.3-3+b3 [21.9 kB] -Get: 138 http://deb.debian.org/debian unstable/main amd64 xauth amd64 1:1.1.2-1.1 [35.9 kB] -Get: 139 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] -Get: 140 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] -Get: 141 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] -Get: 142 http://deb.debian.org/debian unstable/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3+b1 [190 kB] -Get: 143 http://deb.debian.org/debian unstable/main amd64 libdeflate-dev amd64 1.22-1 [55.8 kB] -Get: 144 http://deb.debian.org/debian unstable/main amd64 r-base-dev all 4.4.2-1 [4516 B] -Get: 145 http://deb.debian.org/debian unstable/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] -Get: 146 http://deb.debian.org/debian unstable/main amd64 libswitch-perl all 2.17-3 [20.3 kB] -Get: 147 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] -Get: 148 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] -Get: 149 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] -Get: 150 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] -Get: 151 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] -Get: 152 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] -Get: 153 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB] -Get: 154 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] -Get: 155 http://deb.debian.org/debian unstable/main amd64 libparams-util-perl amd64 1.102-3+b1 [24.4 kB] -Get: 156 http://deb.debian.org/debian unstable/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] -Get: 157 http://deb.debian.org/debian unstable/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] -Get: 158 http://deb.debian.org/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] -Get: 159 http://deb.debian.org/debian unstable/main amd64 libdynaloader-functions-perl all 0.004-1 [12.1 kB] -Get: 160 http://deb.debian.org/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-1+b1 [16.2 kB] -Get: 161 http://deb.debian.org/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] -Get: 162 http://deb.debian.org/debian unstable/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] -Get: 163 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] -Get: 164 http://deb.debian.org/debian unstable/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] -Get: 165 http://deb.debian.org/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] -Get: 166 http://deb.debian.org/debian unstable/main amd64 libclass-load-perl all 0.25-2 [15.3 kB] -Get: 167 http://deb.debian.org/debian unstable/main amd64 libclass-load-xs-perl amd64 0.10-2+b4 [14.2 kB] -Get: 168 http://deb.debian.org/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] -Get: 169 http://deb.debian.org/debian unstable/main amd64 libdevel-globaldestruction-perl all 0.14-4 [7144 B] -Get: 170 http://deb.debian.org/debian unstable/main amd64 libalgorithm-c3-perl all 0.11-2 [10.8 kB] -Get: 171 http://deb.debian.org/debian unstable/main amd64 libclass-c3-perl all 0.35-2 [21.0 kB] -Get: 172 http://deb.debian.org/debian unstable/main amd64 libmro-compat-perl all 0.15-2 [11.8 kB] -Get: 173 http://deb.debian.org/debian unstable/main amd64 libdevel-overloadinfo-perl all 0.007-1 [7896 B] -Get: 174 http://deb.debian.org/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] -Get: 175 http://deb.debian.org/debian unstable/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] -Get: 176 http://deb.debian.org/debian unstable/main amd64 libeval-closure-perl all 0.14-3 [11.2 kB] -Get: 177 http://deb.debian.org/debian unstable/main amd64 libdist-checkconflicts-perl all 0.11-2 [10.5 kB] -Get: 178 http://deb.debian.org/debian unstable/main amd64 libmodule-runtime-conflicts-perl all 0.003-2 [7356 B] -Get: 179 http://deb.debian.org/debian unstable/main amd64 libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB] -Get: 180 http://deb.debian.org/debian unstable/main amd64 libpackage-stash-xs-perl amd64 0.30-1+b4 [20.9 kB] -Get: 181 http://deb.debian.org/debian unstable/main amd64 libmoose-perl amd64 2.2207-1+b2 [766 kB] -Get: 182 http://deb.debian.org/debian unstable/main amd64 libvariable-magic-perl amd64 0.64-1+b1 [44.9 kB] -Get: 183 http://deb.debian.org/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] -Get: 184 http://deb.debian.org/debian unstable/main amd64 libsub-identify-perl amd64 0.14-3+b3 [11.3 kB] -Get: 185 http://deb.debian.org/debian unstable/main amd64 libsub-name-perl amd64 0.28-1 [12.2 kB] -Get: 186 http://deb.debian.org/debian unstable/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] -Get: 187 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.6.0-2 [64.8 kB] -Get: 188 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.9.1-1 [119 kB] -Get: 189 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.9.1-1 [18.5 kB] -Get: 190 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.11.1-1 [360 kB] -Get: 191 http://deb.debian.org/debian unstable/main amd64 libwww-curl-perl amd64 4.17-11 [57.9 kB] -Get: 192 http://deb.debian.org/debian unstable/main amd64 libwww-curl-simple-perl all 0.100191-3 [12.6 kB] -Get: 193 http://deb.debian.org/debian unstable/main amd64 dh-r all 20241218 [42.5 kB] -Get: 194 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-7 [148 kB] -Get: 195 http://deb.debian.org/debian unstable/main amd64 r-cran-littler amd64 0.3.20-2 [103 kB] -Get: 196 http://deb.debian.org/debian unstable/main amd64 littler all 0.3.20-2 [16.0 kB] -Get: 197 http://deb.debian.org/debian unstable/main amd64 r-bioc-biocgenerics all 0.50.0-2 [607 kB] -Get: 198 http://deb.debian.org/debian unstable/main amd64 r-bioc-biobase amd64 2.64.0-4 [2132 kB] -Get: 199 http://deb.debian.org/debian unstable/main amd64 r-bioc-s4vectors amd64 0.42.1+dfsg-2 [1894 kB] -Get: 200 http://deb.debian.org/debian unstable/main amd64 r-bioc-iranges amd64 2.38.1-1 [2305 kB] -Get: 201 http://deb.debian.org/debian unstable/main amd64 r-cran-dbi all 1.2.3-1 [852 kB] -Get: 202 http://deb.debian.org/debian unstable/main amd64 r-cran-bit amd64 4.0.5-1 [1070 kB] -Get: 203 http://deb.debian.org/debian unstable/main amd64 r-cran-bit64 amd64 4.0.5-1 [463 kB] -Get: 204 http://deb.debian.org/debian unstable/main amd64 r-cran-rlang amd64 1.1.4-1 [1712 kB] -Get: 205 http://deb.debian.org/debian unstable/main amd64 r-cran-cli amd64 3.6.3-1 [1342 kB] -Get: 206 http://deb.debian.org/debian unstable/main amd64 r-cran-glue amd64 1.8.0-1 [165 kB] -Get: 207 http://deb.debian.org/debian unstable/main amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] -Get: 208 http://deb.debian.org/debian unstable/main amd64 r-cran-vctrs amd64 0.6.5-1 [1375 kB] -Get: 209 http://deb.debian.org/debian unstable/main amd64 r-cran-blob all 1.2.4-1 [49.6 kB] -Get: 210 http://deb.debian.org/debian unstable/main amd64 r-cran-fastmap amd64 1.2.0-1 [72.2 kB] -Get: 211 http://deb.debian.org/debian unstable/main amd64 r-cran-cachem amd64 1.1.0-1 [73.9 kB] -Get: 212 http://deb.debian.org/debian unstable/main amd64 r-cran-memoise all 2.0.1-1 [53.8 kB] -Get: 213 http://deb.debian.org/debian unstable/main amd64 r-cran-pkgconfig all 2.0.3-2 [19.6 kB] -Get: 214 http://deb.debian.org/debian unstable/main amd64 r-cran-plogr all 0.2.0-3 [14.9 kB] -Get: 215 http://deb.debian.org/debian unstable/main amd64 r-cran-cpp11 all 0.5.0-1 [213 kB] -Get: 216 http://deb.debian.org/debian unstable/main amd64 r-cran-rsqlite amd64 2.3.7-2 [1187 kB] -Get: 217 http://deb.debian.org/debian unstable/main amd64 r-cran-curl amd64 5.2.3+dfsg-1 [178 kB] -Get: 218 http://deb.debian.org/debian unstable/main amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB] -Get: 219 http://deb.debian.org/debian unstable/main amd64 r-cran-mime amd64 0.12-2 [35.6 kB] -Get: 220 http://deb.debian.org/debian unstable/main amd64 r-cran-sys amd64 3.4.3-1 [44.4 kB] -Get: 221 http://deb.debian.org/debian unstable/main amd64 r-cran-askpass amd64 1.2.1-1 [24.2 kB] -Get: 222 http://deb.debian.org/debian unstable/main amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [401 kB] -Get: 223 http://deb.debian.org/debian unstable/main amd64 r-cran-r6 all 2.5.1-1 [105 kB] -Get: 224 http://deb.debian.org/debian unstable/main amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] -Get: 225 http://deb.debian.org/debian unstable/main amd64 r-cran-png amd64 0.1-8-1+b1 [41.5 kB] -Get: 226 http://deb.debian.org/debian unstable/main amd64 r-bioc-zlibbioc all 1.50.0+dfsg-2 [9876 B] -Get: 227 http://deb.debian.org/debian unstable/main amd64 r-bioc-xvector amd64 0.44.0-1 [622 kB] -Get: 228 http://deb.debian.org/debian unstable/main amd64 r-bioc-ucsc.utils all 1.0.0+ds-2 [77.0 kB] -Get: 229 http://deb.debian.org/debian unstable/main amd64 r-bioc-genomeinfodbdata all 1.2.12-1 [12.6 MB] -Get: 230 http://deb.debian.org/debian unstable/main amd64 r-bioc-genomeinfodb all 1.40.1+dfsg-1 [3843 kB] -Get: 231 http://deb.debian.org/debian unstable/main amd64 r-cran-crayon all 1.5.2-1 [165 kB] -Get: 232 http://deb.debian.org/debian unstable/main amd64 r-bioc-biostrings amd64 2.72.1+dfsg-1 [13.3 MB] -Get: 233 http://deb.debian.org/debian unstable/main amd64 r-bioc-keggrest all 1.44.1+dfsg-1 [183 kB] -Get: 234 http://deb.debian.org/debian unstable/main amd64 r-bioc-annotationdbi all 1.66.0-1 [4682 kB] -Get: 235 http://deb.debian.org/debian unstable/main amd64 r-bioc-go.db all 3.19.1-1 [11.9 MB] -Get: 236 http://deb.debian.org/debian unstable/main amd64 r-cran-digest amd64 0.6.37-1 [206 kB] -Get: 237 http://deb.debian.org/debian unstable/main amd64 r-cran-magrittr amd64 2.0.3-1 [201 kB] -Get: 238 http://deb.debian.org/debian unstable/main amd64 r-cran-rappdirs amd64 0.3.3-1 [47.4 kB] -Get: 239 http://deb.debian.org/debian unstable/main amd64 r-cran-withr all 3.0.2+dfsg-1 [226 kB] -Get: 240 http://deb.debian.org/debian unstable/main amd64 r-cran-httr2 all 1.0.5-1 [654 kB] -Get: 241 http://deb.debian.org/debian unstable/main amd64 r-cran-r.methodss3 all 1.8.2-1 [84.5 kB] -Get: 242 http://deb.debian.org/debian unstable/main amd64 r-cran-r.oo all 1.26.0-1 [961 kB] -Get: 243 http://deb.debian.org/debian unstable/main amd64 r-cran-r.utils all 2.12.3-1 [1396 kB] -Get: 244 http://deb.debian.org/debian unstable/main amd64 r-cran-fs amd64 1.6.4+dfsg-1 [247 kB] -Get: 245 http://deb.debian.org/debian unstable/main amd64 r-cran-yulab.utils all 0.1.7-1 [113 kB] -Get: 246 http://deb.debian.org/debian unstable/main amd64 r-cran-pkgkitten all 0.2.4-1 [29.1 kB] -Get: 247 http://deb.debian.org/debian unstable/main amd64 r-cran-rcpp amd64 1.0.13-1-1 [2074 kB] -Get: 248 http://deb.debian.org/debian unstable/main amd64 r-bioc-gosemsim amd64 2.30.2-1 [1097 kB] -Get: 249 http://deb.debian.org/debian unstable/main amd64 r-bioc-pwalign amd64 1.0.0-2 [755 kB] -Get: 250 http://deb.debian.org/debian unstable/main amd64 r-cran-codetools all 0.2-20-1 [91.1 kB] -Get: 251 http://deb.debian.org/debian unstable/main amd64 r-cran-iterators all 1.0.14-1 [337 kB] -Get: 252 http://deb.debian.org/debian unstable/main amd64 r-cran-foreach all 1.5.2-1 [122 kB] -Get: 253 http://deb.debian.org/debian unstable/main amd64 r-cran-doparallel all 1.0.17-1 [188 kB] -Fetched 181 MB in 4s (43.9 MB/s) +Get: 32 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] +Get: 33 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] +Get: 34 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-3 [1600 kB] +Get: 35 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] +Get: 36 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] +Get: 37 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.22 [919 kB] +Get: 38 http://deb.debian.org/debian unstable/main amd64 zip amd64 3.0-14 [233 kB] +Get: 39 http://deb.debian.org/debian unstable/main amd64 unzip amd64 6.0-28 [166 kB] +Get: 40 http://deb.debian.org/debian unstable/main amd64 libpaper2 amd64 2.2.5-0.3 [16.3 kB] +Get: 41 http://deb.debian.org/debian unstable/main amd64 libpaper-utils amd64 2.2.5-0.3 [16.1 kB] +Get: 42 http://deb.debian.org/debian unstable/main amd64 xdg-utils all 1.2.1-2 [75.8 kB] +Get: 43 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-4 [152 kB] +Get: 44 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] +Get: 45 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] +Get: 46 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.44-3 [280 kB] +Get: 47 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] +Get: 48 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] +Get: 49 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] +Get: 50 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] +Get: 51 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB] +Get: 52 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] +Get: 53 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] +Get: 54 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] +Get: 55 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] +Get: 56 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] +Get: 57 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] +Get: 58 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] +Get: 59 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] +Get: 60 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] +Get: 61 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b3 [27.8 kB] +Get: 62 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] +Get: 63 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] +Get: 64 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2~rc1-2 [23.8 kB] +Get: 65 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] +Get: 66 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] +Get: 67 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] +Get: 68 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] +Get: 69 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] +Get: 70 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] +Get: 71 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.19+dfsg-1 [187 kB] +Get: 72 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] +Get: 73 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] +Get: 74 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] +Get: 75 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] +Get: 76 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.1-1 [351 kB] +Get: 77 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] +Get: 78 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.4-1 [1501 kB] +Get: 79 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] +Get: 80 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-11 [836 kB] +Get: 81 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB] +Get: 82 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1+b1 [463 kB] +Get: 83 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB] +Get: 84 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] +Get: 85 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.1.0-1 [478 kB] +Get: 86 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] +Get: 87 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3+b1 [38.1 kB] +Get: 88 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2+b1 [49.4 kB] +Get: 89 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.55.0+ds-3 [225 kB] +Get: 90 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.55.0+ds-3 [54.6 kB] +Get: 91 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.55.0+ds-3 [35.4 kB] +Get: 92 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] +Get: 93 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1042 kB] +Get: 94 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] +Get: 95 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] +Get: 96 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB] +Get: 97 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB] +Get: 98 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] +Get: 99 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] +Get: 100 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] +Get: 101 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b3 [54.6 kB] +Get: 102 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB] +Get: 103 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b2 [17.0 kB] +Get: 104 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.15-1 [791 kB] +Get: 105 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] +Get: 106 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] +Get: 107 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b1 [188 kB] +Get: 108 http://deb.debian.org/debian unstable/main amd64 r-base-core amd64 4.4.2-1 [28.3 MB] +Get: 109 http://deb.debian.org/debian unstable/main amd64 libgfortran-14-dev amd64 14.2.0-11 [881 kB] +Get: 110 http://deb.debian.org/debian unstable/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-11 [11.7 MB] +Get: 111 http://deb.debian.org/debian unstable/main amd64 gfortran-14 amd64 14.2.0-11 [13.2 kB] +Get: 112 http://deb.debian.org/debian unstable/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1 [1284 B] +Get: 113 http://deb.debian.org/debian unstable/main amd64 gfortran amd64 4:14.2.0-1 [1436 B] +Get: 114 http://deb.debian.org/debian unstable/main amd64 libblas-dev amd64 3.12.0-4 [161 kB] +Get: 115 http://deb.debian.org/debian unstable/main amd64 liblapack-dev amd64 3.12.0-4 [4991 kB] +Get: 116 http://deb.debian.org/debian unstable/main amd64 libncurses6 amd64 6.5-2+b1 [105 kB] +Get: 117 http://deb.debian.org/debian unstable/main amd64 libncurses-dev amd64 6.5-2+b1 [351 kB] +Get: 118 http://deb.debian.org/debian unstable/main amd64 libreadline-dev amd64 8.2-6 [153 kB] +Get: 119 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3+b1 [292 kB] +Get: 120 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3+b1 [72.2 kB] +Get: 121 http://deb.debian.org/debian unstable/main amd64 libpcre2-16-0 amd64 10.44-5 [260 kB] +Get: 122 http://deb.debian.org/debian unstable/main amd64 libpcre2-32-0 amd64 10.44-5 [248 kB] +Get: 123 http://deb.debian.org/debian unstable/main amd64 libpcre2-posix3 amd64 10.44-5 [60.4 kB] +Get: 124 http://deb.debian.org/debian unstable/main amd64 libpcre2-dev amd64 10.44-5 [790 kB] +Get: 125 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] +Get: 126 http://deb.debian.org/debian unstable/main amd64 libpng-dev amd64 1.6.44-3 [366 kB] +Get: 127 http://deb.debian.org/debian unstable/main amd64 libbz2-dev amd64 1.0.8-6 [31.4 kB] +Get: 128 http://deb.debian.org/debian unstable/main amd64 liblzma-dev amd64 5.6.3-1+b1 [316 kB] +Get: 129 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 72.1-5+b1 [210 kB] +Get: 130 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 72.1-5+b1 [10.4 MB] +Get: 131 http://deb.debian.org/debian unstable/main amd64 libxmuu1 amd64 2:1.1.3-3+b3 [21.9 kB] +Get: 132 http://deb.debian.org/debian unstable/main amd64 xauth amd64 1:1.1.2-1.1 [35.9 kB] +Get: 133 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] +Get: 134 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] +Get: 135 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] +Get: 136 http://deb.debian.org/debian unstable/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3+b1 [190 kB] +Get: 137 http://deb.debian.org/debian unstable/main amd64 libdeflate-dev amd64 1.22-1 [55.8 kB] +Get: 138 http://deb.debian.org/debian unstable/main amd64 r-base-dev all 4.4.2-1 [4516 B] +Get: 139 http://deb.debian.org/debian unstable/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] +Get: 140 http://deb.debian.org/debian unstable/main amd64 libswitch-perl all 2.17-3 [20.3 kB] +Get: 141 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] +Get: 142 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] +Get: 143 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] +Get: 144 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] +Get: 145 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] +Get: 146 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] +Get: 147 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB] +Get: 148 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] +Get: 149 http://deb.debian.org/debian unstable/main amd64 libparams-util-perl amd64 1.102-3+b1 [24.4 kB] +Get: 150 http://deb.debian.org/debian unstable/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] +Get: 151 http://deb.debian.org/debian unstable/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] +Get: 152 http://deb.debian.org/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] +Get: 153 http://deb.debian.org/debian unstable/main amd64 libdynaloader-functions-perl all 0.004-1 [12.1 kB] +Get: 154 http://deb.debian.org/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-1+b1 [16.2 kB] +Get: 155 http://deb.debian.org/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] +Get: 156 http://deb.debian.org/debian unstable/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] +Get: 157 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] +Get: 158 http://deb.debian.org/debian unstable/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] +Get: 159 http://deb.debian.org/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] +Get: 160 http://deb.debian.org/debian unstable/main amd64 libclass-load-perl all 0.25-2 [15.3 kB] +Get: 161 http://deb.debian.org/debian unstable/main amd64 libclass-load-xs-perl amd64 0.10-2+b4 [14.2 kB] +Get: 162 http://deb.debian.org/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] +Get: 163 http://deb.debian.org/debian unstable/main amd64 libdevel-globaldestruction-perl all 0.14-4 [7144 B] +Get: 164 http://deb.debian.org/debian unstable/main amd64 libalgorithm-c3-perl all 0.11-2 [10.8 kB] +Get: 165 http://deb.debian.org/debian unstable/main amd64 libclass-c3-perl all 0.35-2 [21.0 kB] +Get: 166 http://deb.debian.org/debian unstable/main amd64 libmro-compat-perl all 0.15-2 [11.8 kB] +Get: 167 http://deb.debian.org/debian unstable/main amd64 libdevel-overloadinfo-perl all 0.007-1 [7896 B] +Get: 168 http://deb.debian.org/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] +Get: 169 http://deb.debian.org/debian unstable/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] +Get: 170 http://deb.debian.org/debian unstable/main amd64 libeval-closure-perl all 0.14-3 [11.2 kB] +Get: 171 http://deb.debian.org/debian unstable/main amd64 libdist-checkconflicts-perl all 0.11-2 [10.5 kB] +Get: 172 http://deb.debian.org/debian unstable/main amd64 libmodule-runtime-conflicts-perl all 0.003-2 [7356 B] +Get: 173 http://deb.debian.org/debian unstable/main amd64 libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB] +Get: 174 http://deb.debian.org/debian unstable/main amd64 libpackage-stash-xs-perl amd64 0.30-1+b4 [20.9 kB] +Get: 175 http://deb.debian.org/debian unstable/main amd64 libmoose-perl amd64 2.2207-1+b2 [766 kB] +Get: 176 http://deb.debian.org/debian unstable/main amd64 libvariable-magic-perl amd64 0.64-1+b1 [44.9 kB] +Get: 177 http://deb.debian.org/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] +Get: 178 http://deb.debian.org/debian unstable/main amd64 libsub-identify-perl amd64 0.14-3+b3 [11.3 kB] +Get: 179 http://deb.debian.org/debian unstable/main amd64 libsub-name-perl amd64 0.28-1 [12.2 kB] +Get: 180 http://deb.debian.org/debian unstable/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] +Get: 181 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.6.0-2 [64.8 kB] +Get: 182 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.9.1-1 [119 kB] +Get: 183 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.9.1-1 [18.5 kB] +Get: 184 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.11.1-1 [360 kB] +Get: 185 http://deb.debian.org/debian unstable/main amd64 libwww-curl-perl amd64 4.17-11 [57.9 kB] +Get: 186 http://deb.debian.org/debian unstable/main amd64 libwww-curl-simple-perl all 0.100191-3 [12.6 kB] +Get: 187 http://deb.debian.org/debian unstable/main amd64 dh-r all 20241218 [42.5 kB] +Get: 188 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-7 [148 kB] +Get: 189 http://deb.debian.org/debian unstable/main amd64 r-cran-littler amd64 0.3.20-2 [103 kB] +Get: 190 http://deb.debian.org/debian unstable/main amd64 littler all 0.3.20-2 [16.0 kB] +Get: 191 http://deb.debian.org/debian unstable/main amd64 r-bioc-biocgenerics all 0.50.0-2 [607 kB] +Get: 192 http://deb.debian.org/debian unstable/main amd64 r-bioc-biobase amd64 2.64.0-4 [2132 kB] +Get: 193 http://deb.debian.org/debian unstable/main amd64 r-bioc-s4vectors amd64 0.42.1+dfsg-2 [1894 kB] +Get: 194 http://deb.debian.org/debian unstable/main amd64 r-bioc-iranges amd64 2.38.1-1 [2305 kB] +Get: 195 http://deb.debian.org/debian unstable/main amd64 r-cran-dbi all 1.2.3-1 [852 kB] +Get: 196 http://deb.debian.org/debian unstable/main amd64 r-cran-bit amd64 4.0.5-1 [1070 kB] +Get: 197 http://deb.debian.org/debian unstable/main amd64 r-cran-bit64 amd64 4.0.5-1 [463 kB] +Get: 198 http://deb.debian.org/debian unstable/main amd64 r-cran-rlang amd64 1.1.4-1 [1712 kB] +Get: 199 http://deb.debian.org/debian unstable/main amd64 r-cran-cli amd64 3.6.3-1 [1342 kB] +Get: 200 http://deb.debian.org/debian unstable/main amd64 r-cran-glue amd64 1.8.0-1 [165 kB] +Get: 201 http://deb.debian.org/debian unstable/main amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] +Get: 202 http://deb.debian.org/debian unstable/main amd64 r-cran-vctrs amd64 0.6.5-1 [1375 kB] +Get: 203 http://deb.debian.org/debian unstable/main amd64 r-cran-blob all 1.2.4-1 [49.6 kB] +Get: 204 http://deb.debian.org/debian unstable/main amd64 r-cran-fastmap amd64 1.2.0-1 [72.2 kB] +Get: 205 http://deb.debian.org/debian unstable/main amd64 r-cran-cachem amd64 1.1.0-1 [73.9 kB] +Get: 206 http://deb.debian.org/debian unstable/main amd64 r-cran-memoise all 2.0.1-1 [53.8 kB] +Get: 207 http://deb.debian.org/debian unstable/main amd64 r-cran-pkgconfig all 2.0.3-2 [19.6 kB] +Get: 208 http://deb.debian.org/debian unstable/main amd64 r-cran-plogr all 0.2.0-3 [14.9 kB] +Get: 209 http://deb.debian.org/debian unstable/main amd64 r-cran-cpp11 all 0.5.0-1 [213 kB] +Get: 210 http://deb.debian.org/debian unstable/main amd64 r-cran-rsqlite amd64 2.3.7-2 [1187 kB] +Get: 211 http://deb.debian.org/debian unstable/main amd64 r-cran-curl amd64 5.2.3+dfsg-1 [178 kB] +Get: 212 http://deb.debian.org/debian unstable/main amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB] +Get: 213 http://deb.debian.org/debian unstable/main amd64 r-cran-mime amd64 0.12-2 [35.6 kB] +Get: 214 http://deb.debian.org/debian unstable/main amd64 r-cran-sys amd64 3.4.3-1 [44.4 kB] +Get: 215 http://deb.debian.org/debian unstable/main amd64 r-cran-askpass amd64 1.2.1-1 [24.2 kB] +Get: 216 http://deb.debian.org/debian unstable/main amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [401 kB] +Get: 217 http://deb.debian.org/debian unstable/main amd64 r-cran-r6 all 2.5.1-1 [105 kB] +Get: 218 http://deb.debian.org/debian unstable/main amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] +Get: 219 http://deb.debian.org/debian unstable/main amd64 r-cran-png amd64 0.1-8-1+b1 [41.5 kB] +Get: 220 http://deb.debian.org/debian unstable/main amd64 r-bioc-zlibbioc all 1.50.0+dfsg-2 [9876 B] +Get: 221 http://deb.debian.org/debian unstable/main amd64 r-bioc-xvector amd64 0.44.0-1 [622 kB] +Get: 222 http://deb.debian.org/debian unstable/main amd64 r-bioc-ucsc.utils all 1.0.0+ds-2 [77.0 kB] +Get: 223 http://deb.debian.org/debian unstable/main amd64 r-bioc-genomeinfodbdata all 1.2.12-1 [12.6 MB] +Get: 224 http://deb.debian.org/debian unstable/main amd64 r-bioc-genomeinfodb all 1.40.1+dfsg-1 [3843 kB] +Get: 225 http://deb.debian.org/debian unstable/main amd64 r-cran-crayon all 1.5.2-1 [165 kB] +Get: 226 http://deb.debian.org/debian unstable/main amd64 r-bioc-biostrings amd64 2.72.1+dfsg-1 [13.3 MB] +Get: 227 http://deb.debian.org/debian unstable/main amd64 r-bioc-keggrest all 1.44.1+dfsg-1 [183 kB] +Get: 228 http://deb.debian.org/debian unstable/main amd64 r-bioc-annotationdbi all 1.66.0-1 [4682 kB] +Get: 229 http://deb.debian.org/debian unstable/main amd64 r-bioc-go.db all 3.19.1-1 [11.9 MB] +Get: 230 http://deb.debian.org/debian unstable/main amd64 r-cran-digest amd64 0.6.37-1 [206 kB] +Get: 231 http://deb.debian.org/debian unstable/main amd64 r-cran-magrittr amd64 2.0.3-1 [201 kB] +Get: 232 http://deb.debian.org/debian unstable/main amd64 r-cran-rappdirs amd64 0.3.3-1 [47.4 kB] +Get: 233 http://deb.debian.org/debian unstable/main amd64 r-cran-withr all 3.0.2+dfsg-1 [226 kB] +Get: 234 http://deb.debian.org/debian unstable/main amd64 r-cran-httr2 all 1.0.5-1 [654 kB] +Get: 235 http://deb.debian.org/debian unstable/main amd64 r-cran-r.methodss3 all 1.8.2-1 [84.5 kB] +Get: 236 http://deb.debian.org/debian unstable/main amd64 r-cran-r.oo all 1.26.0-1 [961 kB] +Get: 237 http://deb.debian.org/debian unstable/main amd64 r-cran-r.utils all 2.12.3-1 [1396 kB] +Get: 238 http://deb.debian.org/debian unstable/main amd64 r-cran-fs amd64 1.6.4+dfsg-1 [247 kB] +Get: 239 http://deb.debian.org/debian unstable/main amd64 r-cran-yulab.utils all 0.1.7-1 [113 kB] +Get: 240 http://deb.debian.org/debian unstable/main amd64 r-cran-pkgkitten all 0.2.4-1 [29.1 kB] +Get: 241 http://deb.debian.org/debian unstable/main amd64 r-cran-rcpp amd64 1.0.13-1-1 [2074 kB] +Get: 242 http://deb.debian.org/debian unstable/main amd64 r-bioc-gosemsim amd64 2.30.2-1 [1097 kB] +Get: 243 http://deb.debian.org/debian unstable/main amd64 r-bioc-pwalign amd64 1.0.0-2 [755 kB] +Get: 244 http://deb.debian.org/debian unstable/main amd64 r-cran-codetools all 0.2-20-1 [91.1 kB] +Get: 245 http://deb.debian.org/debian unstable/main amd64 r-cran-iterators all 1.0.14-1 [337 kB] +Get: 246 http://deb.debian.org/debian unstable/main amd64 r-cran-foreach all 1.5.2-1 [122 kB] +Get: 247 http://deb.debian.org/debian unstable/main amd64 r-cran-doparallel all 1.0.17-1 [188 kB] +Fetched 178 MB in 2s (101 MB/s) Preconfiguring packages ... Selecting previously unselected package tzdata. -(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19858 files and directories currently installed.) +(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19980 files and directories currently installed.) Preparing to unpack .../000-tzdata_2024b-4_all.deb ... Unpacking tzdata (2024b-4) ... Selecting previously unselected package libproc2-0:amd64. @@ -476,677 +506,659 @@ Selecting previously unselected package dwz. Preparing to unpack .../030-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... -Selecting previously unselected package libunistring5:amd64. -Preparing to unpack .../031-libunistring5_1.3-1_amd64.deb ... -Unpacking libunistring5:amd64 (1.3-1) ... Selecting previously unselected package libicu72:amd64. -Preparing to unpack .../032-libicu72_72.1-5+b1_amd64.deb ... +Preparing to unpack .../031-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. -Preparing to unpack .../033-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... +Preparing to unpack .../032-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. -Preparing to unpack .../034-gettext_0.22.5-3_amd64.deb ... +Preparing to unpack .../033-gettext_0.22.5-3_amd64.deb ... Unpacking gettext (0.22.5-3) ... Selecting previously unselected package intltool-debian. -Preparing to unpack .../035-intltool-debian_0.35.0+20060710.6_all.deb ... +Preparing to unpack .../034-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. -Preparing to unpack .../036-po-debconf_1.0.21+nmu1_all.deb ... +Preparing to unpack .../035-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. -Preparing to unpack .../037-debhelper_13.22_all.deb ... +Preparing to unpack .../036-debhelper_13.22_all.deb ... Unpacking debhelper (13.22) ... Selecting previously unselected package zip. -Preparing to unpack .../038-zip_3.0-14_amd64.deb ... +Preparing to unpack .../037-zip_3.0-14_amd64.deb ... Unpacking zip (3.0-14) ... Selecting previously unselected package unzip. -Preparing to unpack .../039-unzip_6.0-28_amd64.deb ... +Preparing to unpack .../038-unzip_6.0-28_amd64.deb ... Unpacking unzip (6.0-28) ... Selecting previously unselected package libpaper2:amd64. -Preparing to unpack .../040-libpaper2_2.2.5-0.3_amd64.deb ... +Preparing to unpack .../039-libpaper2_2.2.5-0.3_amd64.deb ... Unpacking libpaper2:amd64 (2.2.5-0.3) ... Selecting previously unselected package libpaper-utils. -Preparing to unpack .../041-libpaper-utils_2.2.5-0.3_amd64.deb ... +Preparing to unpack .../040-libpaper-utils_2.2.5-0.3_amd64.deb ... Unpacking libpaper-utils (2.2.5-0.3) ... Selecting previously unselected package xdg-utils. -Preparing to unpack .../042-xdg-utils_1.2.1-2_all.deb ... +Preparing to unpack .../041-xdg-utils_1.2.1-2_all.deb ... Unpacking xdg-utils (1.2.1-2) ... Selecting previously unselected package libblas3:amd64. -Preparing to unpack .../043-libblas3_3.12.0-4_amd64.deb ... +Preparing to unpack .../042-libblas3_3.12.0-4_amd64.deb ... Unpacking libblas3:amd64 (3.12.0-4) ... Selecting previously unselected package libexpat1:amd64. -Preparing to unpack .../044-libexpat1_2.6.4-1_amd64.deb ... +Preparing to unpack .../043-libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package libbrotli1:amd64. -Preparing to unpack .../045-libbrotli1_1.1.0-2+b6_amd64.deb ... +Preparing to unpack .../044-libbrotli1_1.1.0-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b6) ... Selecting previously unselected package libpng16-16t64:amd64. -Preparing to unpack .../046-libpng16-16t64_1.6.44-3_amd64.deb ... +Preparing to unpack .../045-libpng16-16t64_1.6.44-3_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.44-3) ... Selecting previously unselected package libfreetype6:amd64. -Preparing to unpack .../047-libfreetype6_2.13.3+dfsg-1_amd64.deb ... +Preparing to unpack .../046-libfreetype6_2.13.3+dfsg-1_amd64.deb ... Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) ... Selecting previously unselected package fonts-dejavu-mono. -Preparing to unpack .../048-fonts-dejavu-mono_2.37-8_all.deb ... +Preparing to unpack .../047-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. -Preparing to unpack .../049-fonts-dejavu-core_2.37-8_all.deb ... +Preparing to unpack .../048-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. -Preparing to unpack .../050-fontconfig-config_2.15.0-1.1+b1_amd64.deb ... +Preparing to unpack .../049-fontconfig-config_2.15.0-1.1+b1_amd64.deb ... Unpacking fontconfig-config (2.15.0-1.1+b1) ... Selecting previously unselected package libfontconfig1:amd64. -Preparing to unpack .../051-libfontconfig1_2.15.0-1.1+b1_amd64.deb ... +Preparing to unpack .../050-libfontconfig1_2.15.0-1.1+b1_amd64.deb ... Unpacking libfontconfig1:amd64 (2.15.0-1.1+b1) ... Selecting previously unselected package libpixman-1-0:amd64. -Preparing to unpack .../052-libpixman-1-0_0.44.0-3_amd64.deb ... +Preparing to unpack .../051-libpixman-1-0_0.44.0-3_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.44.0-3) ... Selecting previously unselected package libxau6:amd64. -Preparing to unpack .../053-libxau6_1%3a1.0.11-1_amd64.deb ... +Preparing to unpack .../052-libxau6_1%3a1.0.11-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp6:amd64. -Preparing to unpack .../054-libxdmcp6_1%3a1.1.5-1_amd64.deb ... +Preparing to unpack .../053-libxdmcp6_1%3a1.1.5-1_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.5-1) ... Selecting previously unselected package libxcb1:amd64. -Preparing to unpack .../055-libxcb1_1.17.0-2+b1_amd64.deb ... +Preparing to unpack .../054-libxcb1_1.17.0-2+b1_amd64.deb ... Unpacking libxcb1:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libx11-data. -Preparing to unpack .../056-libx11-data_2%3a1.8.10-2_all.deb ... +Preparing to unpack .../055-libx11-data_2%3a1.8.10-2_all.deb ... Unpacking libx11-data (2:1.8.10-2) ... Selecting previously unselected package libx11-6:amd64. -Preparing to unpack .../057-libx11-6_2%3a1.8.10-2_amd64.deb ... +Preparing to unpack .../056-libx11-6_2%3a1.8.10-2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.10-2) ... Selecting previously unselected package libxcb-render0:amd64. -Preparing to unpack .../058-libxcb-render0_1.17.0-2+b1_amd64.deb ... +Preparing to unpack .../057-libxcb-render0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-render0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-shm0:amd64. -Preparing to unpack .../059-libxcb-shm0_1.17.0-2+b1_amd64.deb ... +Preparing to unpack .../058-libxcb-shm0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxext6:amd64. -Preparing to unpack .../060-libxext6_2%3a1.3.4-1+b2_amd64.deb ... +Preparing to unpack .../059-libxext6_2%3a1.3.4-1+b2_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b2) ... Selecting previously unselected package libxrender1:amd64. -Preparing to unpack .../061-libxrender1_1%3a0.9.10-1.1+b3_amd64.deb ... +Preparing to unpack .../060-libxrender1_1%3a0.9.10-1.1+b3_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1.1+b3) ... Selecting previously unselected package libcairo2:amd64. -Preparing to unpack .../062-libcairo2_1.18.2-2_amd64.deb ... +Preparing to unpack .../061-libcairo2_1.18.2-2_amd64.deb ... Unpacking libcairo2:amd64 (1.18.2-2) ... 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Selecting previously unselected package libpango-1.0-0:amd64. -Preparing to unpack .../094-libpango-1.0-0_1.55.0+ds-3_amd64.deb ... +Preparing to unpack .../088-libpango-1.0-0_1.55.0+ds-3_amd64.deb ... Unpacking libpango-1.0-0:amd64 (1.55.0+ds-3) ... Selecting previously unselected package libpangoft2-1.0-0:amd64. -Preparing to unpack .../095-libpangoft2-1.0-0_1.55.0+ds-3_amd64.deb ... +Preparing to unpack .../089-libpangoft2-1.0-0_1.55.0+ds-3_amd64.deb ... Unpacking libpangoft2-1.0-0:amd64 (1.55.0+ds-3) ... Selecting previously unselected package libpangocairo-1.0-0:amd64. -Preparing to unpack .../096-libpangocairo-1.0-0_1.55.0+ds-3_amd64.deb ... +Preparing to unpack .../090-libpangocairo-1.0-0_1.55.0+ds-3_amd64.deb ... Unpacking libpangocairo-1.0-0:amd64 (1.55.0+ds-3) ... Selecting previously unselected package libreadline8t64:amd64. -Preparing to unpack .../097-libreadline8t64_8.2-6_amd64.deb ... +Preparing to unpack .../091-libreadline8t64_8.2-6_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-6) ... Selecting previously unselected package libtcl8.6:amd64. -Preparing to unpack .../098-libtcl8.6_8.6.15+dfsg-2_amd64.deb ... +Preparing to unpack .../092-libtcl8.6_8.6.15+dfsg-2_amd64.deb ... Unpacking libtcl8.6:amd64 (8.6.15+dfsg-2) ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libxft2:amd64. -Preparing to unpack .../106-libxft2_2.3.6-1+b3_amd64.deb ... +Preparing to unpack .../100-libxft2_2.3.6-1+b3_amd64.deb ... Unpacking libxft2:amd64 (2.3.6-1+b3) ... Selecting previously unselected package x11-common. -Preparing to unpack .../107-x11-common_1%3a7.7+23.1_all.deb ... +Preparing to unpack .../101-x11-common_1%3a7.7+23.1_all.deb ... Unpacking x11-common (1:7.7+23.1) ... Selecting previously unselected package libxss1:amd64. -Preparing to unpack .../108-libxss1_1%3a1.2.3-1+b2_amd64.deb ... +Preparing to unpack .../102-libxss1_1%3a1.2.3-1+b2_amd64.deb ... Unpacking libxss1:amd64 (1:1.2.3-1+b2) ... 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Selecting previously unselected package r-cran-memoise. -Preparing to unpack .../211-r-cran-memoise_2.0.1-1_all.deb ... +Preparing to unpack .../205-r-cran-memoise_2.0.1-1_all.deb ... Unpacking r-cran-memoise (2.0.1-1) ... Selecting previously unselected package r-cran-pkgconfig. -Preparing to unpack .../212-r-cran-pkgconfig_2.0.3-2_all.deb ... +Preparing to unpack .../206-r-cran-pkgconfig_2.0.3-2_all.deb ... Unpacking r-cran-pkgconfig (2.0.3-2) ... Selecting previously unselected package r-cran-plogr. -Preparing to unpack .../213-r-cran-plogr_0.2.0-3_all.deb ... +Preparing to unpack .../207-r-cran-plogr_0.2.0-3_all.deb ... Unpacking r-cran-plogr (0.2.0-3) ... Selecting previously unselected package r-cran-cpp11. -Preparing to unpack .../214-r-cran-cpp11_0.5.0-1_all.deb ... +Preparing to unpack .../208-r-cran-cpp11_0.5.0-1_all.deb ... Unpacking r-cran-cpp11 (0.5.0-1) ... Selecting previously unselected package r-cran-rsqlite. -Preparing to unpack .../215-r-cran-rsqlite_2.3.7-2_amd64.deb ... +Preparing to unpack .../209-r-cran-rsqlite_2.3.7-2_amd64.deb ... Unpacking r-cran-rsqlite (2.3.7-2) ... Selecting previously unselected package r-cran-curl. -Preparing to unpack .../216-r-cran-curl_5.2.3+dfsg-1_amd64.deb ... +Preparing to unpack .../210-r-cran-curl_5.2.3+dfsg-1_amd64.deb ... Unpacking r-cran-curl (5.2.3+dfsg-1) ... Selecting previously unselected package r-cran-jsonlite. -Preparing to unpack .../217-r-cran-jsonlite_1.8.9+dfsg-1_amd64.deb ... +Preparing to unpack .../211-r-cran-jsonlite_1.8.9+dfsg-1_amd64.deb ... Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... Selecting previously unselected package r-cran-mime. -Preparing to unpack .../218-r-cran-mime_0.12-2_amd64.deb ... +Preparing to unpack .../212-r-cran-mime_0.12-2_amd64.deb ... Unpacking r-cran-mime (0.12-2) ... 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Selecting previously unselected package r-bioc-biostrings. -Preparing to unpack .../231-r-bioc-biostrings_2.72.1+dfsg-1_amd64.deb ... +Preparing to unpack .../225-r-bioc-biostrings_2.72.1+dfsg-1_amd64.deb ... Unpacking r-bioc-biostrings (2.72.1+dfsg-1) ... Selecting previously unselected package r-bioc-keggrest. -Preparing to unpack .../232-r-bioc-keggrest_1.44.1+dfsg-1_all.deb ... +Preparing to unpack .../226-r-bioc-keggrest_1.44.1+dfsg-1_all.deb ... Unpacking r-bioc-keggrest (1.44.1+dfsg-1) ... Selecting previously unselected package r-bioc-annotationdbi. -Preparing to unpack .../233-r-bioc-annotationdbi_1.66.0-1_all.deb ... +Preparing to unpack .../227-r-bioc-annotationdbi_1.66.0-1_all.deb ... Unpacking r-bioc-annotationdbi (1.66.0-1) ... Selecting previously unselected package r-bioc-go.db. -Preparing to unpack .../234-r-bioc-go.db_3.19.1-1_all.deb ... +Preparing to unpack .../228-r-bioc-go.db_3.19.1-1_all.deb ... Unpacking r-bioc-go.db (3.19.1-1) ... Selecting previously unselected package r-cran-digest. -Preparing to unpack .../235-r-cran-digest_0.6.37-1_amd64.deb ... +Preparing to unpack .../229-r-cran-digest_0.6.37-1_amd64.deb ... Unpacking r-cran-digest (0.6.37-1) ... Selecting previously unselected package r-cran-magrittr. -Preparing to unpack .../236-r-cran-magrittr_2.0.3-1_amd64.deb ... +Preparing to unpack .../230-r-cran-magrittr_2.0.3-1_amd64.deb ... Unpacking r-cran-magrittr (2.0.3-1) ... Selecting previously unselected package r-cran-rappdirs. -Preparing to unpack .../237-r-cran-rappdirs_0.3.3-1_amd64.deb ... +Preparing to unpack .../231-r-cran-rappdirs_0.3.3-1_amd64.deb ... Unpacking r-cran-rappdirs (0.3.3-1) ... Selecting previously unselected package r-cran-withr. -Preparing to unpack .../238-r-cran-withr_3.0.2+dfsg-1_all.deb ... +Preparing to unpack .../232-r-cran-withr_3.0.2+dfsg-1_all.deb ... Unpacking r-cran-withr (3.0.2+dfsg-1) ... Selecting previously unselected package r-cran-httr2. -Preparing to unpack .../239-r-cran-httr2_1.0.5-1_all.deb ... +Preparing to unpack .../233-r-cran-httr2_1.0.5-1_all.deb ... Unpacking r-cran-httr2 (1.0.5-1) ... Selecting previously unselected package r-cran-r.methodss3. -Preparing to unpack .../240-r-cran-r.methodss3_1.8.2-1_all.deb ... +Preparing to unpack .../234-r-cran-r.methodss3_1.8.2-1_all.deb ... Unpacking r-cran-r.methodss3 (1.8.2-1) ... Selecting previously unselected package r-cran-r.oo. -Preparing to unpack .../241-r-cran-r.oo_1.26.0-1_all.deb ... +Preparing to unpack .../235-r-cran-r.oo_1.26.0-1_all.deb ... Unpacking r-cran-r.oo (1.26.0-1) ... Selecting previously unselected package r-cran-r.utils. -Preparing to unpack .../242-r-cran-r.utils_2.12.3-1_all.deb ... +Preparing to unpack .../236-r-cran-r.utils_2.12.3-1_all.deb ... Unpacking r-cran-r.utils (2.12.3-1) ... Selecting previously unselected package r-cran-fs. -Preparing to unpack .../243-r-cran-fs_1.6.4+dfsg-1_amd64.deb ... +Preparing to unpack .../237-r-cran-fs_1.6.4+dfsg-1_amd64.deb ... Unpacking r-cran-fs (1.6.4+dfsg-1) ... Selecting previously unselected package r-cran-yulab.utils. -Preparing to unpack .../244-r-cran-yulab.utils_0.1.7-1_all.deb ... +Preparing to unpack .../238-r-cran-yulab.utils_0.1.7-1_all.deb ... Unpacking r-cran-yulab.utils (0.1.7-1) ... Selecting previously unselected package r-cran-pkgkitten. -Preparing to unpack .../245-r-cran-pkgkitten_0.2.4-1_all.deb ... +Preparing to unpack .../239-r-cran-pkgkitten_0.2.4-1_all.deb ... Unpacking r-cran-pkgkitten (0.2.4-1) ... Selecting previously unselected package r-cran-rcpp. -Preparing to unpack .../246-r-cran-rcpp_1.0.13-1-1_amd64.deb ... +Preparing to unpack .../240-r-cran-rcpp_1.0.13-1-1_amd64.deb ... Unpacking r-cran-rcpp (1.0.13-1-1) ... Selecting previously unselected package r-bioc-gosemsim. -Preparing to unpack .../247-r-bioc-gosemsim_2.30.2-1_amd64.deb ... +Preparing to unpack .../241-r-bioc-gosemsim_2.30.2-1_amd64.deb ... Unpacking r-bioc-gosemsim (2.30.2-1) ... Selecting previously unselected package r-bioc-pwalign. -Preparing to unpack .../248-r-bioc-pwalign_1.0.0-2_amd64.deb ... +Preparing to unpack .../242-r-bioc-pwalign_1.0.0-2_amd64.deb ... Unpacking r-bioc-pwalign (1.0.0-2) ... Selecting previously unselected package r-cran-codetools. -Preparing to unpack .../249-r-cran-codetools_0.2-20-1_all.deb ... +Preparing to unpack .../243-r-cran-codetools_0.2-20-1_all.deb ... Unpacking r-cran-codetools (0.2-20-1) ... Selecting previously unselected package r-cran-iterators. -Preparing to unpack .../250-r-cran-iterators_1.0.14-1_all.deb ... +Preparing to unpack .../244-r-cran-iterators_1.0.14-1_all.deb ... Unpacking r-cran-iterators (1.0.14-1) ... Selecting previously unselected package r-cran-foreach. -Preparing to unpack .../251-r-cran-foreach_1.5.2-1_all.deb ... +Preparing to unpack .../245-r-cran-foreach_1.5.2-1_all.deb ... Unpacking r-cran-foreach (1.5.2-1) ... Selecting previously unselected package r-cran-doparallel. -Preparing to unpack .../252-r-cran-doparallel_1.0.17-1_all.deb ... +Preparing to unpack .../246-r-cran-doparallel_1.0.17-1_all.deb ... Unpacking r-cran-doparallel (1.0.17-1) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... @@ -1179,6 +1191,7 @@ invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libtry-tiny-perl (0.32-1) ... +Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libnghttp2-14:amd64 (1.64.0-1) ... Setting up libdeflate0:amd64 (1.22-1) ... Setting up gettext-base (0.22.5-3) ... @@ -1196,14 +1209,16 @@ Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Fri Dec 27 08:27:04 UTC 2024. -Universal Time is now: Fri Dec 27 08:27:04 UTC 2024. +Local time is now: Thu Jan 29 14:52:12 UTC 2026. +Universal Time is now: Thu Jan 29 14:52:12 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up zip (3.0-14) ... Setting up libpackage-stash-xs-perl:amd64 (0.30-1+b4) ... Setting up autotools-dev (20220109.1) ... Setting up libpcre2-32-0:amd64 (10.44-5) ... +Setting up libglib2.0-0t64:amd64 (2.82.4-1) ... +No schema files found: doing nothing. Setting up libblas3:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libpkgconf3:amd64 (1.8.1-4) ... @@ -1212,10 +1227,10 @@ Setting up libswitch-perl (2.17-3) ... Setting up libx11-data (2:1.8.10-2) ... Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-3+b1) ... +Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libncurses6:amd64 (6.5-2+b1) ... Setting up libfribidi0:amd64 (1.0.16-1) ... Setting up libproc2-0:amd64 (2:4.0.4-6) ... -Setting up libunistring5:amd64 (1.3-1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.44-3) ... Setting up libvariable-magic-perl (0.64-1+b1) ... @@ -1238,14 +1253,12 @@ Setting up liblzma-dev:amd64 (5.6.3-1+b1) ... Setting up libsub-name-perl:amd64 (0.28-1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... -Setting up libffi8:amd64 (3.4.6-1) ... Setting up libpcre2-posix3:amd64 (10.44-5) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:amd64 (4.5.1+git230720-5) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up procps (2:4.0.4-6) ... -Setting up libtasn1-6:amd64 (4.19.0-3+b3) ... Setting up libx11-6:amd64 (2:1.8.10-2) ... Setting up libthai-data (0.1.29-2) ... Setting up libdevel-globaldestruction-perl (0.14-4) ... @@ -1263,6 +1276,7 @@ update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up liburi-perl (5.30-1) ... Setting up libxmuu1:amd64 (2:1.1.3-3+b3) ... +Setting up libngtcp2-crypto-gnutls8:amd64 (1.9.1-1) ... Setting up libblas-dev:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up dctrl-tools (2.24-3+b1) ... @@ -1284,10 +1298,10 @@ Setting up libpng-dev:amd64 (1.6.44-3) ... Setting up libjpeg-dev:amd64 (1:2.1.5-3+b1) ... Setting up libxext6:amd64 (2:1.3.4-1+b2) ... -Setting up libidn2-0:amd64 (2.3.7-2+b1) ... Setting up libpaper-utils (2.2.5-0.3) ... Setting up libclass-c3-perl (0.35-2) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1+b1) ... +Setting up libldap-2.5-0:amd64 (2.5.19+dfsg-1) ... Setting up gfortran-14-x86-64-linux-gnu (14.2.0-11) ... Setting up pkgconf:amd64 (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... @@ -1296,10 +1310,7 @@ Setting up ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 152 added, 0 removed; done. -Setting up libglib2.0-0t64:amd64 (2.82.4-1) ... -No schema files found: doing nothing. Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... -Setting up libp11-kit0:amd64 (0.25.5-3) ... Setting up liblapack-dev:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... @@ -1318,16 +1329,17 @@ Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libeval-closure-perl (0.14-3) ... -Setting up libgnutls30t64:amd64 (3.8.8-2) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libxft2:amd64 (2.3.6-1+b3) ... +Setting up libcurl4t64:amd64 (8.11.1-1) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:amd64 (8.6.15-1) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up libpango-1.0-0:amd64 (1.55.0+ds-3) ... -Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... +Setting up libcurl3t64-gnutls:amd64 (8.11.1-1) ... +Setting up libwww-curl-perl:amd64 (4.17-11) ... Setting up libreadline-dev:amd64 (8.2-6) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. @@ -1336,20 +1348,14 @@ update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:amd64 (1.18.2-2) ... -Setting up libldap-2.5-0:amd64 (2.5.19+dfsg-1) ... Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3+b1) ... Setting up libmodule-runtime-perl (0.016-2) ... -Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2+b1) ... Setting up libdist-checkconflicts-perl (0.11-2) ... Setting up libpangoft2-1.0-0:amd64 (1.55.0+ds-3) ... -Setting up libngtcp2-crypto-gnutls8:amd64 (1.9.1-1) ... Setting up libpangocairo-1.0-0:amd64 (1.55.0+ds-3) ... -Setting up libcurl4t64:amd64 (8.11.1-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... -Setting up libcurl3t64-gnutls:amd64 (8.11.1-1) ... -Setting up libwww-curl-perl:amd64 (4.17-11) ... Setting up debhelper (13.22) ... Setting up libmodule-runtime-conflicts-perl (0.003-2) ... Setting up libclass-load-perl (0.25-2) ... @@ -1438,7 +1444,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/r-bioc-rcpi-1.42.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../r-bioc-rcpi_1.42.0+ds-1_source.changes +I: user script /srv/workspace/pbuilder/648091/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for experimental +I: user script /srv/workspace/pbuilder/648091/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/r-bioc-rcpi-1.42.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../r-bioc-rcpi_1.42.0+ds-1_source.changes dpkg-buildpackage: info: source package r-bioc-rcpi dpkg-buildpackage: info: source version 1.42.0+ds-1 dpkg-buildpackage: info: source distribution experimental @@ -1533,12 +1543,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/648091/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/648091/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3040321 and its subdirectories -I: Current time: Thu Dec 26 20:27:59 -12 2024 -I: pbuilder-time-stamp: 1735288079 +I: removing directory /srv/workspace/pbuilder/648091 and its subdirectories +I: Current time: Fri Jan 30 04:52:58 +14 2026 +I: pbuilder-time-stamp: 1769698378