Diff of the two buildlogs: -- --- b1/build.log 2020-06-22 08:02:55.260950411 +0000 +++ b2/build.log 2020-06-22 08:03:50.947862463 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Jun 21 19:54:35 -12 2020 -I: pbuilder-time-stamp: 1592812475 +I: Current time: Mon Jul 26 04:25:56 +14 2021 +I: pbuilder-time-stamp: 1627223156 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -18,7 +18,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Thu Aug 30 04:54:41 2018 -12 +gpgv: Signature made Fri Aug 31 06:54:41 2018 +14 gpgv: using RSA key 2ED459C30E8DB8A8D93CA77A97F2D4FCA09F304E gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libminc_2.4.03-2.dsc @@ -34,138 +34,172 @@ dpkg-source: info: applying disable-dimension-test.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/25646/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/63810/tmp/hooks/D01_modify_environment starting +debug: Running on profitbricks-build16-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/63810/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/63810/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.0.3(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=18' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='5e05bc75b8d04159a45d7ac549251128' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='25646' - PS1='# ' - PS2='> ' + INVOCATION_ID=e8cfe40884b545a39717f2c5f92f5168 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=63810 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.uop1585GiM/pbuilderrc_bs3Q --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.uop1585GiM/b1 --logfile b1/build.log libminc_2.4.03-2.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.uop1585GiM/pbuilderrc_vonV --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.uop1585GiM/b2 --logfile b2/build.log libminc_2.4.03-2.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux profitbricks-build12-i386 4.19.0-9-686-pae #1 SMP Debian 4.19.118-2+deb10u1 (2020-06-07) i686 GNU/Linux + Linux i-capture-the-hostname 4.19.0-9-amd64 #1 SMP Debian 4.19.118-2+deb10u1 (2020-06-07) x86_64 GNU/Linux I: ls -l /bin total 5476 - -rwxr-xr-x 1 root root 1302248 Apr 17 2019 bash - -rwxr-xr-x 3 root root 38280 Jul 10 2019 bunzip2 - -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzcat - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep - -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzip2 - -rwxr-xr-x 1 root root 17768 Jul 10 2019 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore - -rwxr-xr-x 1 root root 38692 Feb 28 2019 cat - -rwxr-xr-x 1 root root 75588 Feb 28 2019 chgrp - -rwxr-xr-x 1 root root 63268 Feb 28 2019 chmod - -rwxr-xr-x 1 root root 75588 Feb 28 2019 chown - -rwxr-xr-x 1 root root 153732 Feb 28 2019 cp - -rwxr-xr-x 1 root root 132820 Jan 17 2019 dash - -rwxr-xr-x 1 root root 120676 Feb 28 2019 date - -rwxr-xr-x 1 root root 92040 Feb 28 2019 dd - -rwxr-xr-x 1 root root 100620 Feb 28 2019 df - -rwxr-xr-x 1 root root 149736 Feb 28 2019 dir - -rwxr-xr-x 1 root root 79412 Jan 9 2019 dmesg - lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname - -rwxr-xr-x 1 root root 34532 Feb 28 2019 echo - -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep - -rwxr-xr-x 1 root root 34532 Feb 28 2019 false - -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep - -rwxr-xr-x 1 root root 67700 Jan 9 2019 findmnt - -rwsr-xr-x 1 root root 30112 Apr 22 07:38 fusermount - -rwxr-xr-x 1 root root 206392 Jan 7 2019 grep - -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip - -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe - -rwxr-xr-x 1 root root 100952 Jan 5 2019 gzip - -rwxr-xr-x 1 root root 21916 Sep 26 2018 hostname - -rwxr-xr-x 1 root root 79752 Feb 28 2019 ln - -rwxr-xr-x 1 root root 55400 Jul 26 2018 login - -rwxr-xr-x 1 root root 149736 Feb 28 2019 ls - -rwxr-xr-x 1 root root 112032 Jan 9 2019 lsblk - -rwxr-xr-x 1 root root 87972 Feb 28 2019 mkdir - -rwxr-xr-x 1 root root 79748 Feb 28 2019 mknod - -rwxr-xr-x 1 root root 46916 Feb 28 2019 mktemp - -rwxr-xr-x 1 root root 42348 Jan 9 2019 more - -rwsr-xr-x 1 root root 50592 Jan 9 2019 mount - -rwxr-xr-x 1 root root 13724 Jan 9 2019 mountpoint - -rwxr-xr-x 1 root root 157832 Feb 28 2019 mv - lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 38660 Feb 28 2019 pwd - lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash - -rwxr-xr-x 1 root root 46852 Feb 28 2019 readlink - -rwxr-xr-x 1 root root 75588 Feb 28 2019 rm - -rwxr-xr-x 1 root root 42756 Feb 28 2019 rmdir - -rwxr-xr-x 1 root root 22276 Jan 21 2019 run-parts - -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jun 19 20:26 sh -> dash - -rwxr-xr-x 1 root root 34532 Feb 28 2019 sleep - -rwxr-xr-x 1 root root 79652 Feb 28 2019 stty - -rwsr-xr-x 1 root root 71072 Jan 9 2019 su - -rwxr-xr-x 1 root root 34564 Feb 28 2019 sync - -rwxr-xr-x 1 root root 504024 Apr 23 2019 tar - -rwxr-xr-x 1 root root 13860 Jan 21 2019 tempfile - -rwxr-xr-x 1 root root 104292 Feb 28 2019 touch - -rwxr-xr-x 1 root root 34532 Feb 28 2019 true - -rwxr-xr-x 1 root root 17768 Apr 22 07:38 ulockmgr_server - -rwsr-xr-x 1 root root 30108 Jan 9 2019 umount - -rwxr-xr-x 1 root root 34532 Feb 28 2019 uname - -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress - -rwxr-xr-x 1 root root 149736 Feb 28 2019 vdir - -rwxr-xr-x 1 root root 34208 Jan 9 2019 wdctl - -rwxr-xr-x 1 root root 946 Jan 21 2019 which - lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat - -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp - -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff - -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep - -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep - -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce - -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep - -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless - -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore - -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew -I: user script /srv/workspace/pbuilder/25646/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1302248 Apr 18 2019 bash + -rwxr-xr-x 3 root root 38280 Jul 11 2019 bunzip2 + -rwxr-xr-x 3 root root 38280 Jul 11 2019 bzcat + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep + -rwxr-xr-x 3 root root 38280 Jul 11 2019 bzip2 + -rwxr-xr-x 1 root root 17768 Jul 11 2019 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore + -rwxr-xr-x 1 root root 38692 Mar 1 2019 cat + -rwxr-xr-x 1 root root 75588 Mar 1 2019 chgrp + -rwxr-xr-x 1 root root 63268 Mar 1 2019 chmod + -rwxr-xr-x 1 root root 75588 Mar 1 2019 chown + -rwxr-xr-x 1 root root 153732 Mar 1 2019 cp + -rwxr-xr-x 1 root root 132820 Jan 18 2019 dash + -rwxr-xr-x 1 root root 120676 Mar 1 2019 date + -rwxr-xr-x 1 root root 92040 Mar 1 2019 dd + -rwxr-xr-x 1 root root 100620 Mar 1 2019 df + -rwxr-xr-x 1 root root 149736 Mar 1 2019 dir + -rwxr-xr-x 1 root root 79412 Jan 10 2019 dmesg + lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname + -rwxr-xr-x 1 root root 34532 Mar 1 2019 echo + -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep + -rwxr-xr-x 1 root root 34532 Mar 1 2019 false + -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep + -rwxr-xr-x 1 root root 67700 Jan 10 2019 findmnt + -rwsr-xr-x 1 root root 30112 Apr 23 2020 fusermount + -rwxr-xr-x 1 root root 206392 Jan 8 2019 grep + -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip + -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe + -rwxr-xr-x 1 root root 100952 Jan 6 2019 gzip + -rwxr-xr-x 1 root root 21916 Sep 27 2018 hostname + -rwxr-xr-x 1 root root 79752 Mar 1 2019 ln + -rwxr-xr-x 1 root root 55400 Jul 27 2018 login + -rwxr-xr-x 1 root root 149736 Mar 1 2019 ls + -rwxr-xr-x 1 root root 112032 Jan 10 2019 lsblk + -rwxr-xr-x 1 root root 87972 Mar 1 2019 mkdir + -rwxr-xr-x 1 root root 79748 Mar 1 2019 mknod + -rwxr-xr-x 1 root root 46916 Mar 1 2019 mktemp + -rwxr-xr-x 1 root root 42348 Jan 10 2019 more + -rwsr-xr-x 1 root root 50592 Jan 10 2019 mount + -rwxr-xr-x 1 root root 13724 Jan 10 2019 mountpoint + -rwxr-xr-x 1 root root 157832 Mar 1 2019 mv + lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 38660 Mar 1 2019 pwd + lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash + -rwxr-xr-x 1 root root 46852 Mar 1 2019 readlink + -rwxr-xr-x 1 root root 75588 Mar 1 2019 rm + -rwxr-xr-x 1 root root 42756 Mar 1 2019 rmdir + -rwxr-xr-x 1 root root 22276 Jan 22 2019 run-parts + -rwxr-xr-x 1 root root 125036 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jul 26 04:26 sh -> bash + lrwxrwxrwx 1 root root 4 Jul 24 04:48 sh.distrib -> dash + -rwxr-xr-x 1 root root 34532 Mar 1 2019 sleep + -rwxr-xr-x 1 root root 79652 Mar 1 2019 stty + -rwsr-xr-x 1 root root 71072 Jan 10 2019 su + -rwxr-xr-x 1 root root 34564 Mar 1 2019 sync + -rwxr-xr-x 1 root root 504024 Apr 24 2019 tar + -rwxr-xr-x 1 root root 13860 Jan 22 2019 tempfile + -rwxr-xr-x 1 root root 104292 Mar 1 2019 touch + -rwxr-xr-x 1 root root 34532 Mar 1 2019 true + -rwxr-xr-x 1 root root 17768 Apr 23 2020 ulockmgr_server + -rwsr-xr-x 1 root root 30108 Jan 10 2019 umount + -rwxr-xr-x 1 root root 34532 Mar 1 2019 uname + -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress + -rwxr-xr-x 1 root root 149736 Mar 1 2019 vdir + -rwxr-xr-x 1 root root 34208 Jan 10 2019 wdctl + -rwxr-xr-x 1 root root 946 Jan 22 2019 which + lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat + -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp + -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff + -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep + -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep + -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce + -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep + -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless + -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore + -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew +I: user script /srv/workspace/pbuilder/63810/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -290,7 +324,7 @@ Get: 75 http://deb.debian.org/debian buster/main i386 libnetcdf-dev i386 1:4.6.2-1 [82.7 kB] Get: 76 http://deb.debian.org/debian buster/main i386 libnifti2 i386 2.0.0-3 [101 kB] Get: 77 http://deb.debian.org/debian buster/main i386 libnifti-dev i386 2.0.0-3 [140 kB] -Fetched 36.3 MB in 15s (2384 kB/s) +Fetched 36.3 MB in 0s (88.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19234 files and directories currently installed.) @@ -623,7 +657,7 @@ fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/libminc-2.4.03/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b +I: Running cd /build/libminc-2.4.03/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package libminc dpkg-buildpackage: info: source version 2.4.03-2 dpkg-buildpackage: info: source distribution unstable @@ -759,7 +793,7 @@ -- Build files have been written to: /build/libminc-2.4.03/obj-i686-linux-gnu make[1]: Leaving directory '/build/libminc-2.4.03' dh_auto_build - cd obj-i686-linux-gnu && make -j10 + cd obj-i686-linux-gnu && make -j18 make[1]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' /usr/bin/cmake -S/build/libminc-2.4.03 -B/build/libminc-2.4.03/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/libminc-2.4.03/obj-i686-linux-gnu/CMakeFiles /build/libminc-2.4.03/obj-i686-linux-gnu/CMakeFiles/progress.marks @@ -772,41 +806,49 @@ make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03 /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/CMakeFiles/minc2_static.dir/DependInfo.cmake --color= Scanning dependencies of target minc2_static -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/build Scanning dependencies of target minc2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/build make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' [ 0%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -c /build/libminc-2.4.03/libsrc2/convert.c -[ 0%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -[ 0%] Building C object CMakeFiles/minc2.dir/libsrc2/datatype.c.o [ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -[ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.03/libsrc2/datatype.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.03/libsrc2/datatype.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -c 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-I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/convert.c.o -c /build/libminc-2.4.03/libsrc2/convert.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time 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-[ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/free.c.o -c /build/libminc-2.4.03/libsrc2/free.c +[ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o +[ 7%] Building C object CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/free.c.o -c /build/libminc-2.4.03/libsrc2/free.c -[ 5%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.03/libsrc2/hyper.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc 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-/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': -/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); - ^~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': -/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); - ^~~~~ +[ 7%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include 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-I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c +[ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/record.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c +[ 8%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_attr': /build/libminc-2.4.03/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", @@ -844,297 +886,41 @@ /build/libminc-2.4.03/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncpy ( data->name_ptr, attr_name, data->name_len ); ~~~~^~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': -/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - buffer = malloc(n * sizeof(double)); - ^ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_next': /build/libminc-2.4.03/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncpy ( path, data->frame_ptr->relpath, maxpath ); ^~~~~~~ +/build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': +/build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + *name = H5Tget_member_name(volume->ftype_id, index); + ^~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_grp_next': /build/libminc-2.4.03/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncpy ( path, data->frame_ptr->relpath, maxpath ); ^~~~~~~ +/build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': +/build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + offset = index * H5Tget_size(ftype_id); + ^ /build/libminc-2.4.03/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncpy ( data->frame_ptr->relpath, tmp, maxpath ); ^~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miget_attr_length': -/build/libminc-2.4.03/libsrc2/grpattr.c:551:15: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - *length = hdf_dims[0]; - ^~~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miset_attr_values': -/build/libminc-2.4.03/libsrc2/grpattr.c:906:31: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - slength = strlen ( path ) - ( pch - path ); - ^ -/build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - std_name[i] = path[pch - path + 1 + i]; - ^ -/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': -/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - buffer = malloc(n * sizeof(double)); - ^ -/build/libminc-2.4.03/libsrc2/hyper.c:256:21: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - icount[i] = count[i]; - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:258:25: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - restructure_array(ndims, buffer, icount, H5Tget_size(type_id), - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:276:42: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - icount[volume->dim_indices[i]] = count[i]; - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:286:26: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - temp_buffer=malloc(buffer_size); - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:294:33: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - memcpy(temp_buffer,buffer,buffer_size); - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:296:25: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': -/build/libminc-2.4.03/libsrc2/hyper.c:433:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - ndims = volume->number_of_dims; - ^~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:445:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - mspc_id = H5Screate_simple(ndims, hdf_count, NULL); - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:453:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:496:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - slice_ndims = ndims; - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:507:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - for (i = slice_ndims; i < ndims; i++ ) { - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:515:57: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); - ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:523:57: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); - ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': -/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); - ^~~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:661:21: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - icount[i] = count[i]; - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:663:25: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:674:42: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - icount[volume->dim_indices[i]] = count[i]; - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:677:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - imap[volume->dim_indices[i]] = i; - ^ -/build/libminc-2.4.03/libsrc2/hyper.c:684:26: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - temp_buffer=malloc(buffer_size); - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:691:33: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - memcpy(temp_buffer,buffer,buffer_size); - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': -/build/libminc-2.4.03/libsrc2/hyper.c:694:27: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - restructure_array(ndims, temp_buffer, icount, H5Tget_size(buffer_type_id), imap, idir); - ^~~~~ -/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': -/build/libminc-2.4.03/libsrc2/hyper.c:922:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - ndims = volume->number_of_dims; - ^~~~~~ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/hyper.c:16: -/build/libminc-2.4.03/libsrc2/hyper.c:933:50: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); - ^~~~~ -/build/libminc-2.4.03/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' - #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} - ^~~ -/build/libminc-2.4.03/libsrc2/hyper.c:940:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:941:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:980:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - slice_ndims = ndims; - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:991:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - for (i = slice_ndims; i < ndims; i++ ) { - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': -/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - buffer = malloc(n * sizeof(double)); - ^ -/build/libminc-2.4.03/libsrc2/hyper.c:999:57: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); - ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:1000:57: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); - ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - buffer = malloc(n * sizeof(double)); - ^ -/build/libminc-2.4.03/libsrc2/hyper.c:1052:31: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - temp_buffer=(double*)malloc(buffer_size); - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:1103:22: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - icount[i] = count[i]; - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:1105:25: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:1116:42: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - icount[volume->dim_indices[i]] = count[i]; - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:1119:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - imap[volume->dim_indices[i]] = i; - ^ -/build/libminc-2.4.03/libsrc2/hyper.c:1125:25: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - temp_buffer2=malloc(input_buffer_size); - ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:1132:32: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - memcpy(temp_buffer2,buffer,input_buffer_size); - ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:1135:25: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - restructure_array(ndims, temp_buffer2, icount, H5Tget_size(buffer_type_id), imap, idir); - ^~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'micopy_dimension': -/build/libminc-2.4.03/libsrc2/dimension.c:99:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); - ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c:135:60: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - handle->widths = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); - ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'micreate_dimension': -/build/libminc-2.4.03/libsrc2/dimension.c:288:51: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - handle->widths = ( double * ) malloc ( length * sizeof ( double ) ); - ~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': -/build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - number_of_dims = volume->number_of_dims; - ^~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - max_dims = array_length; - ^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': -/build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': -/build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': -/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - offsets[j] = dimension->start + ( i * dimension->step ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_offsets': -/build/libminc-2.4.03/libsrc2/dimension.c:1083:47: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - ( double * ) malloc ( dimension->length * sizeof ( double ) ); - ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': -/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] - dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; - ^~ -/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] - dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; - ^~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': -/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_widths': -/build/libminc-2.4.03/libsrc2/dimension.c:1651:65: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) ); - ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'micopy_dimension': -/build/libminc-2.4.03/libsrc2/dimension.c:99:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); - ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c:135:60: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - handle->widths = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); - ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'micreate_dimension': -/build/libminc-2.4.03/libsrc2/dimension.c:288:51: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - handle->widths = ( double * ) malloc ( length * sizeof ( double ) ); - ~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': -/build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - number_of_dims = volume->number_of_dims; - ^~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - max_dims = array_length; - ^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': -/build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': -/build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': -/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - offsets[j] = dimension->start + ( i * dimension->step ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_offsets': -/build/libminc-2.4.03/libsrc2/dimension.c:1083:47: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - ( double * ) malloc ( dimension->length * sizeof ( double ) ); - ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': -/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] - dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; - ^~ -/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] - dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; - ^~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': -/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_widths': -/build/libminc-2.4.03/libsrc2/dimension.c:1651:65: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) ); - ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -[ 5%] Building C object CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c -[ 5%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c -[ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/hyper.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.03/libsrc2/hyper.c -[ 6%] Building C object CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c /build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miget_attr_length': /build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] return (tmp); ^ -/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': -/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - result = H5Tget_member_value(volume->mtype_id,idx,value); - ^~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:551:15: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + *length = hdf_dims[0]; + ^~~~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_attr': /build/libminc-2.4.03/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", ^~~~~~ +/build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': +/build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + return (tmp); + ^ /build/libminc-2.4.03/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncpy ( fullpath, MI_ROOT_PATH "/" , length ); ^~~~~~ @@ -1157,10 +943,22 @@ /build/libminc-2.4.03/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncat(fullpath, path, length - strlen(fullpath) - 1); ^ +/build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': +/build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + *name = H5Tget_member_name(volume->ftype_id, index); + ^~~~~ +/build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_recursion': +/build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + offset = index * H5Tget_size(ftype_id); + ^ /build/libminc-2.4.03/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] data->frame_ptr->grp_idx ); ~~~~~~~~~~~~~~~^~~~~~~~~ +/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': +/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + result = H5Tget_member_value(volume->mtype_id,idx,value); + ^~~ /build/libminc-2.4.03/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] data->frame_ptr->grp_idx - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ @@ -1168,10 +966,21 @@ /build/libminc-2.4.03/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncpy ( data->name_ptr, attr_name, data->name_len ); ~~~~^~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miset_attr_values': +/build/libminc-2.4.03/libsrc2/grpattr.c:906:31: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + slength = strlen ( path ) - ( pch - path ); + ^ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_next': /build/libminc-2.4.03/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncpy ( path, data->frame_ptr->relpath, maxpath ); ^~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + std_name[i] = path[pch - path + 1 + i]; + ^ +/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': +/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + result = H5Tget_member_value(volume->mtype_id,idx,value); + ^~~ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_grp_next': /build/libminc-2.4.03/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncpy ( path, data->frame_ptr->relpath, maxpath ); @@ -1190,6 +999,36 @@ /build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] std_name[i] = path[pch - path + 1 + i]; ^ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': +/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); + ^~~~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': +/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); + ^~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': +/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); + ^~~~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': +/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); + ^~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': +/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + buffer = malloc(n * sizeof(double)); + ^ +/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + buffer = malloc(n * sizeof(double)); + ^ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': +/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + buffer = malloc(n * sizeof(double)); + ^ +/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + buffer = malloc(n * sizeof(double)); + ^ /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': /build/libminc-2.4.03/libsrc2/hyper.c:256:21: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] icount[i] = count[i]; @@ -1219,18 +1058,80 @@ /build/libminc-2.4.03/libsrc2/hyper.c:453:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': +/build/libminc-2.4.03/libsrc2/hyper.c:256:21: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + icount[i] = count[i]; + ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:496:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] slice_ndims = ndims; ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:258:25: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + restructure_array(ndims, buffer, icount, H5Tget_size(type_id), + ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:507:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] for (i = slice_ndims; i < ndims; i++ ) { ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:276:42: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + icount[volume->dim_indices[i]] = count[i]; + ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:515:57: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:286:26: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + temp_buffer=malloc(buffer_size); + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:294:33: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + memcpy(temp_buffer,buffer,buffer_size); + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:523:57: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); + ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:296:25: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': +/build/libminc-2.4.03/libsrc2/hyper.c:433:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + ndims = volume->number_of_dims; + ^~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:445:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + mspc_id = H5Screate_simple(ndims, hdf_count, NULL); + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:453:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:496:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + slice_ndims = ndims; + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:507:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + for (i = slice_ndims; i < ndims; i++ ) { + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:661:21: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + icount[i] = count[i]; + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:663:25: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:515:57: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); + ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:674:42: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + icount[volume->dim_indices[i]] = count[i]; + ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:523:57: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:677:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + imap[volume->dim_indices[i]] = i; + ^ +/build/libminc-2.4.03/libsrc2/hyper.c:684:26: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + temp_buffer=malloc(buffer_size); + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:691:33: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + memcpy(temp_buffer,buffer,buffer_size); + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:694:27: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + restructure_array(ndims, temp_buffer, icount, H5Tget_size(buffer_type_id), imap, idir); + ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:661:21: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] icount[i] = count[i]; ^~~~~ @@ -1252,6 +1153,73 @@ /build/libminc-2.4.03/libsrc2/hyper.c:694:27: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] restructure_array(ndims, temp_buffer, icount, H5Tget_size(buffer_type_id), imap, idir); ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': +/build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + x1 = x; + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + y1 = y + ( j * scale ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + y1 = y + ( j * scale ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1492:18: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + y1 = y + ( j * scale ); + ^ +/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': +/build/libminc-2.4.03/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + z1 = z + ( k * scale ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + z1 = z + ( k * scale ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1493:18: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + z1 = z + ( k * scale ); + ^ +/build/libminc-2.4.03/libsrc2/hyper.c:922:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + ndims = volume->number_of_dims; + ^~~~~~ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/hyper.c:16: +/build/libminc-2.4.03/libsrc2/hyper.c:933:50: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); + ^~~~~ +/build/libminc-2.4.03/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' + #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} + ^~~ +/build/libminc-2.4.03/libsrc2/hyper.c:940:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:941:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); + ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': +/build/libminc-2.4.03/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + r = miget_slice_range ( volume, pos, volume->number_of_dims, + ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:980:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + slice_ndims = ndims; + ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + r = miget_slice_range ( volume, pos, volume->number_of_dims, + ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:991:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + for (i = slice_ndims; i < ndims; i++ ) { + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:999:57: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double)); + ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:1000:57: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); + ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'minc_update_thumbnail': +/build/libminc-2.4.03/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + osize[i] = isize[i] / scale; + ^ +/build/libminc-2.4.03/libsrc2/hyper.c:1052:31: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + temp_buffer=(double*)malloc(buffer_size); + ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': /build/libminc-2.4.03/libsrc2/hyper.c:922:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] ndims = volume->number_of_dims; @@ -1265,12 +1233,30 @@ /build/libminc-2.4.03/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} ^~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1779:14: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); + ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1782:15: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + out_bytes = osize[1] * osize[2] * sizeof ( double ); + ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:940:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + count[0] = scale; + ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:941:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + start[0] = slice * scale; + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + count[0] = scale; + ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:980:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] slice_ndims = ndims; ^~~~~ @@ -1283,6 +1269,17 @@ /build/libminc-2.4.03/libsrc2/hyper.c:1000:57: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double)); ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': +/build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + return ( ( double * ) malloc ( sizeof ( double ) * n ) ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': +/build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + mat = ( double ** ) malloc ( n * sizeof ( double * ) ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); + ^ /build/libminc-2.4.03/libsrc2/hyper.c:1052:31: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] temp_buffer=(double*)malloc(buffer_size); ^~~~~~~~~~~ @@ -1307,6 +1304,27 @@ /build/libminc-2.4.03/libsrc2/hyper.c:1135:25: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] restructure_array(ndims, temp_buffer2, icount, H5Tget_size(buffer_type_id), imap, idir); ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:1103:22: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + icount[i] = count[i]; + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:1105:25: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:1116:42: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + icount[volume->dim_indices[i]] = count[i]; + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:1119:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + imap[volume->dim_indices[i]] = i; + ^ +/build/libminc-2.4.03/libsrc2/hyper.c:1125:25: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + temp_buffer2=malloc(input_buffer_size); + ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:1132:32: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + memcpy(temp_buffer2,buffer,input_buffer_size); + ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:1135:25: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + restructure_array(ndims, temp_buffer2, icount, H5Tget_size(buffer_type_id), imap, idir); + ^~~~~ /build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': /build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] x1 = x; @@ -1369,42 +1387,136 @@ /build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); ^ -[ 7%] Building C object CMakeFiles/minc2_static.dir/libsrc2/record.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c -[ 7%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -[ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'micopy_dimension': +/build/libminc-2.4.03/libsrc2/dimension.c:99:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); + ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c:135:60: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + handle->widths = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); + ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'micreate_dimension': +/build/libminc-2.4.03/libsrc2/dimension.c:288:51: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + handle->widths = ( double * ) malloc ( length * sizeof ( double ) ); + ~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': +/build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + number_of_dims = volume->number_of_dims; + ^~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + max_dims = array_length; + ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': +/build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': +/build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + ^ +[ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c -/build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': -/build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - *name = H5Tget_member_name(volume->ftype_id, index); - ^~~~~ -/build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': -/build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - offset = index * H5Tget_size(ftype_id); - ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': +/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + offsets[j] = dimension->start + ( i * dimension->step ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_offsets': +/build/libminc-2.4.03/libsrc2/dimension.c:1083:47: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + ( double * ) malloc ( dimension->length * sizeof ( double ) ); + ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': +/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] + dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; + ^~ +/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] + dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; + ^~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': +/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + ^ +[ 9%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_widths': +/build/libminc-2.4.03/libsrc2/dimension.c:1651:65: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) ); + ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'micopy_dimension': +/build/libminc-2.4.03/libsrc2/dimension.c:99:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); + ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c:135:60: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + handle->widths = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); + ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'micreate_dimension': +/build/libminc-2.4.03/libsrc2/dimension.c:288:51: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + handle->widths = ( double * ) malloc ( length * sizeof ( double ) ); + ~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': +/build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + number_of_dims = volume->number_of_dims; + ^~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + max_dims = array_length; + ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': +/build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': +/build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': +/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + offsets[j] = dimension->start + ( i * dimension->step ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_offsets': +/build/libminc-2.4.03/libsrc2/dimension.c:1083:47: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + ( double * ) malloc ( dimension->length * sizeof ( double ) ); + ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': +/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] + dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; + ^~ +/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] + dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; + ^~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': +/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_widths': +/build/libminc-2.4.03/libsrc2/dimension.c:1651:65: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) ); + ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +[ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c +[ 10%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c +[ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c +[ 10%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c +/build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': +/build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + ndims = H5Sget_simple_extent_ndims ( fspc_id ); + ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': /build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] ndims = H5Sget_simple_extent_ndims ( fspc_id ); ^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': -/build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - return (tmp); - ^ -/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': -/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - result = H5Tget_member_value(volume->mtype_id,idx,value); - ^~~ -[ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c -[ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c -[ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c -[ 9%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c -[ 10%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c /build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': /build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); @@ -1422,88 +1534,49 @@ /build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); ^ -[ 10%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c -[ 11%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': -/build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - x1 = x; - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - y1 = y + ( j * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - y1 = y + ( j * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1492:18: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - y1 = y + ( j * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - z1 = z + ( k * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - z1 = z + ( k * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1493:18: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - z1 = z + ( k * scale ); - ^ -[ 11%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': -/build/libminc-2.4.03/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - r = miget_slice_range ( volume, pos, volume->number_of_dims, - ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - r = miget_slice_range ( volume, pos, volume->number_of_dims, - ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'minc_update_thumbnail': -/build/libminc-2.4.03/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - osize[i] = isize[i] / scale; - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1779:14: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); - ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1782:15: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - out_bytes = osize[1] * osize[2] * sizeof ( double ); - ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - count[0] = scale; - ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - start[0] = slice * scale; - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - count[0] = scale; - ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': -/build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - return ( ( double * ) malloc ( sizeof ( double ) * n ) ); +/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': +/build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); + ^ +/build/libminc-2.4.03/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + handle->edge_lengths[i] = dims[i]; + ^~~~ +/build/libminc-2.4.03/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, + ^ +/build/libminc-2.4.03/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + handle->zlib_level = cd_values[0]; + ^~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miset_props_blocking': +/build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); ^ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': -/build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - mat = ( double ** ) malloc ( n * sizeof ( double * ) ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); - ^ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c -[ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c -/build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': -/build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - *name = H5Tget_member_name(volume->ftype_id, index); - ^~~~~ -/build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': -/build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - offset = index * H5Tget_size(ftype_id); - ^ -/build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': -/build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncpy(buffer, tmp, maxlen); - ^~~~~~ +[ 12%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o +[ 12%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c +[ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c +[ 12%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c +[ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c +[ 13%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c +/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': +/build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:132:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + fd = H5Fopen(path, mode, prp_id); + ^~~~ +/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_create': +/build/libminc-2.4.03/libsrc2/volume.c:224:115: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:227:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); + ^~~~~ /build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': /build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); @@ -1541,6 +1614,29 @@ /build/libminc-2.4.03/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} ^~~ +In file included from /usr/include/hdf5/serial/hdf5.h:34, + from /build/libminc-2.4.03/libsrc2/volume.c:8: +/build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': +/usr/include/hdf5/serial/H5Ppublic.h:44:31: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + #define H5OPEN H5open(), +/usr/include/hdf5/serial/H5Fpublic.h:52:32: note: in expansion of macro 'H5OPEN' + #define H5F_ACC_TRUNC (H5CHECK H5OPEN 0x0002u) /*overwrite existing files */ + ^~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:584:35: note: in expansion of macro 'H5F_ACC_TRUNC' + file_id = _hdf_create(filename, H5F_ACC_TRUNC); + ^~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:634:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + hdf_size[i] = create_props->edge_lengths[i]; + ^~~~~~~~~~~~ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/volume.c:32: +/build/libminc-2.4.03/libsrc2/volume.c:664:72: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") + ~~~~~~~~~~~~^~~~~~~~~~~~ +/build/libminc-2.4.03/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' + #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} + ^~~ /build/libminc-2.4.03/libsrc2/volume.c:896:70: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * ^ @@ -1553,20 +1649,37 @@ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) ^~~~~~~~~~~ +[ 14%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o /build/libminc-2.4.03/libsrc2/volume.c:988:73: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); ^ -/build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': -/build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - ndims = H5Sget_simple_extent_ndims ( fspc_id ); - ^~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c +/build/libminc-2.4.03/libsrc2/volume.c:896:70: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * + ^ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/volume.c:32: +/build/libminc-2.4.03/libsrc2/volume.c:900:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); + ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c: In function '_miget_irregular_spacing': /build/libminc-2.4.03/libsrc2/volume.c:1171:35: warning: conversion from 'hssize_t' {aka 'long long int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] hdim->offsets = malloc(n_points * sizeof(double)); ~~~~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:988:73: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); + ^ /build/libminc-2.4.03/libsrc2/volume.c:1195:34: warning: conversion from 'hssize_t' {aka 'long long int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] hdim->widths = malloc(n_points * sizeof(double)); ~~~~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c: In function '_miget_irregular_spacing': +/build/libminc-2.4.03/libsrc2/volume.c:1171:35: warning: conversion from 'hssize_t' {aka 'long long int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + hdim->offsets = malloc(n_points * sizeof(double)); + ~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/hdf5.h:27, from /build/libminc-2.4.03/libsrc2/volume.c:8: /build/libminc-2.4.03/libsrc2/volume.c: In function 'miopen_volume': @@ -1576,6 +1689,9 @@ /build/libminc-2.4.03/libsrc2/volume.c:1347:16: note: in expansion of macro 'H5F_ACC_RDONLY' hdf_mode = H5F_ACC_RDONLY; ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1195:34: warning: conversion from 'hssize_t' {aka 'long long int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + hdim->widths = malloc(n_points * sizeof(double)); + ~~~~~~~~~^~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Fpublic.h:51:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] #define H5F_ACC_RDWR (H5CHECK H5OPEN 0x0001u) /*open for read and write */ ^ @@ -1594,170 +1710,30 @@ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1509:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); - ^ -/build/libminc-2.4.03/libsrc2/volume.c:1510:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); - ^ -/build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); - ^ -[ 12%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c -[ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c -[ 13%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c -[ 13%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c -/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': -/build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - numSpaces = width + 1 - strlen(infoPtr->key); - ^ -/build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] - numSpaces = width + 1 - strlen(infoPtr->key); - ^~~~~ -[ 13%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c -/build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': -/build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - files = malloc(sizeof(*files) * array_size); - ^ -/build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - files = realloc(files, sizeof(*files) * array_size); - ^ -/build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': -/build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'unsigned int'} changes value from '-1' to '4294967295' [-Wsign-conversion] - offset_next = -1; /* Initialize. */ - ^ -/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] - #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) - ^ -/build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' - BIT_SET(bitmap, offset_start); - ^~~~~~~ -/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] - #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) - ^ -/build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' - BIT_SET(bitmap, offset_next); - ^~~~~~~ -[ 14%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c -/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': -/build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); - ^ -/build/libminc-2.4.03/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - handle->edge_lengths[i] = dims[i]; - ^~~~ -/build/libminc-2.4.03/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, - ^ -/build/libminc-2.4.03/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - handle->zlib_level = cd_values[0]; - ^~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miset_props_blocking': -/build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); - ^ -[ 15%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c -/build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': -/build/libminc-2.4.03/libsrc2/volume.c:99:41: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size between 0 and 127 [-Wformat-truncation=] - result = snprintf(id_str, length, "%s:%s:%s:%u:%u", - ^~ -/build/libminc-2.4.03/libsrc2/volume.c:101:21: - host_str, - ~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:99:37: note: using the range [0, 4294967295] for directive argument - result = snprintf(id_str, length, "%s:%s:%s:%u:%u", - ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:99:37: note: using the range [0, 4294967295] for directive argument -In file included from /usr/include/stdio.h:873, - from /usr/include/hdf5/serial/H5Epublic.h:20, - from /usr/include/hdf5/serial/hdf5.h:26, - from /build/libminc-2.4.03/libsrc2/volume.c:8: -/usr/include/i386-linux-gnu/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 7 and 304 bytes into a destination of size 128 - return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, - ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - __bos (__s), __fmt, __va_arg_pack ()); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': -/build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:132:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - fd = H5Fopen(path, mode, prp_id); - ^~~~ -/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_create': -/build/libminc-2.4.03/libsrc2/volume.c:224:115: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:227:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); - ^~~~~ -In file included from /usr/include/hdf5/serial/hdf5.h:34, - from /build/libminc-2.4.03/libsrc2/volume.c:8: -/build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': -/usr/include/hdf5/serial/H5Ppublic.h:44:31: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - #define H5OPEN H5open(), -/usr/include/hdf5/serial/H5Fpublic.h:52:32: note: in expansion of macro 'H5OPEN' - #define H5F_ACC_TRUNC (H5CHECK H5OPEN 0x0002u) /*overwrite existing files */ - ^~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:584:35: note: in expansion of macro 'H5F_ACC_TRUNC' - file_id = _hdf_create(filename, H5F_ACC_TRUNC); - ^~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:634:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - hdf_size[i] = create_props->edge_lengths[i]; - ^~~~~~~~~~~~ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/volume.c:32: -/build/libminc-2.4.03/libsrc2/volume.c:664:72: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") - ~~~~~~~~~~~~^~~~~~~~~~~~ -/build/libminc-2.4.03/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' - #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} - ^~~ -/build/libminc-2.4.03/libsrc2/volume.c:896:70: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * - ^ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/volume.c:32: -/build/libminc-2.4.03/libsrc2/volume.c:900:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); - ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:988:73: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); - ^ -/build/libminc-2.4.03/libsrc2/volume.c: In function '_miget_irregular_spacing': -/build/libminc-2.4.03/libsrc2/volume.c:1171:35: warning: conversion from 'hssize_t' {aka 'long long int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - hdim->offsets = malloc(n_points * sizeof(double)); - ~~~~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1195:34: warning: conversion from 'hssize_t' {aka 'long long int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - hdim->widths = malloc(n_points * sizeof(double)); - ~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/hdf5.h:27, from /build/libminc-2.4.03/libsrc2/volume.c:8: /build/libminc-2.4.03/libsrc2/volume.c: In function 'miopen_volume': +/build/libminc-2.4.03/libsrc2/volume.c:1509:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); + ^ /usr/include/hdf5/serial/H5Fpublic.h:50:24: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] #define H5F_ACC_RDONLY (H5CHECK H5OPEN 0x0000u) /*absence of rdwr => rd-only */ ^ /build/libminc-2.4.03/libsrc2/volume.c:1347:16: note: in expansion of macro 'H5F_ACC_RDONLY' hdf_mode = H5F_ACC_RDONLY; ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1510:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); + ^ /usr/include/hdf5/serial/H5Fpublic.h:51:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] #define H5F_ACC_RDWR (H5CHECK H5OPEN 0x0001u) /*open for read and write */ ^ /build/libminc-2.4.03/libsrc2/volume.c:1349:16: note: in expansion of macro 'H5F_ACC_RDWR' hdf_mode = H5F_ACC_RDWR; ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); + ^ /build/libminc-2.4.03/libsrc2/volume.c:1421:62: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * ^ @@ -1779,14 +1755,237 @@ /build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); ^ -[ 15%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o +[ 14%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c +/build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': +/build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncpy(buffer, tmp, maxlen); + ^~~~~~ +/build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': +/build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncpy(buffer, tmp, maxlen); + ^~~~~~ +[ 15%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c +[ 15%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c +[ 16%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c +[ 16%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c +/build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': +/build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + files = malloc(sizeof(*files) * array_size); + ^ +/build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + files = realloc(files, sizeof(*files) * array_size); + ^ +/build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': +/build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + files = malloc(sizeof(*files) * array_size); + ^ +/build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + files = realloc(files, sizeof(*files) * array_size); + ^ +[ 16%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c +[ 17%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c +/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': +/build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + numSpaces = width + 1 - strlen(infoPtr->key); + ^ +/build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] + numSpaces = width + 1 - strlen(infoPtr->key); + ^~~~~ +/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': +/build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + numSpaces = width + 1 - strlen(infoPtr->key); + ^ +/build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] + numSpaces = width + 1 - strlen(infoPtr->key); + ^~~~~ +/build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': +/build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'unsigned int'} changes value from '-1' to '4294967295' [-Wsign-conversion] + offset_next = -1; /* Initialize. */ + ^ +/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] + #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) + ^ +/build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' + BIT_SET(bitmap, offset_start); + ^~~~~~~ +/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] + #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) + ^ +/build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' + BIT_SET(bitmap, offset_next); + ^~~~~~~ +/build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': +/build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'unsigned int'} changes value from '-1' to '4294967295' [-Wsign-conversion] + offset_next = -1; /* Initialize. */ + ^ +/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] + #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) + ^ +/build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' + BIT_SET(bitmap, offset_start); + ^~~~~~~ +/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] + #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) + ^ +/build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' + BIT_SET(bitmap, offset_next); + ^~~~~~~ +[ 18%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c +[ 18%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c +[ 18%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c -[ 16%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -[ 16%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c +[ 18%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c +[ 19%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c -[ 16%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o +[ 20%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c +[ 20%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c +[ 20%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c +[ 20%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c +[ 21%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, + from /build/libminc-2.4.03/libsrc/dim_conversion.c:93: +/build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert': +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' + *((unsigned char *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' + *((signed char *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' + *((unsigned short *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' + *((signed short *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' + *((unsigned int *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' + *((signed int *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' + *((float *) ptr) = MIN(FLT_MAX,dvalue); \ + ^~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' + *((unsigned char *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' + *((signed char *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' + *((unsigned short *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' + *((signed short *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' + *((unsigned int *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' + *((signed int *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' + *((float *) ptr) = MIN(FLT_MAX,dvalue); \ + ^~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + ^~~~~~~~~~~~~~ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/dim_conversion.c:93: /build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert': @@ -1936,8 +2135,26 @@ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 17%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c +/build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': +/build/libminc-2.4.03/libsrc2/volume.c:99:41: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size between 0 and 127 [-Wformat-truncation=] + result = snprintf(id_str, length, "%s:%s:%s:%u:%u", + ^~ +/build/libminc-2.4.03/libsrc2/volume.c:101:21: + host_str, + ~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:99:37: note: using the range [0, 4294967295] for directive argument + result = snprintf(id_str, length, "%s:%s:%s:%u:%u", + ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:99:37: note: using the range [0, 4294967295] for directive argument +In file included from /usr/include/stdio.h:873, + from /usr/include/hdf5/serial/H5Epublic.h:20, + from /usr/include/hdf5/serial/hdf5.h:26, + from /build/libminc-2.4.03/libsrc2/volume.c:8: +/usr/include/i386-linux-gnu/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 7 and 304 bytes into a destination of size 128 + return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, + ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + __bos (__s), __fmt, __va_arg_pack ()); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': /build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] icvp->user_do_range = value; @@ -1975,15 +2192,9 @@ /build/libminc-2.4.03/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] icvp->user_dim_size[1] = value; ^~~~~ -[ 17%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -/build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': -/build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncpy(buffer, tmp, maxlen); - ^~~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] icvp->user_keep_aspect = value; ^~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c /build/libminc-2.4.03/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] icvp->user_dim_size[idim] = value; ^~~~~ @@ -1995,9 +2206,56 @@ /build/libminc-2.4.03/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] *value = dvalue; ^~~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': +/build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + icvp->user_do_range = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + icvp->user_do_norm = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + icvp->user_user_norm = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + icvp->user_do_fillvalue = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + icvp->user_do_dimconv = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + icvp->user_do_scalar = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + ival = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + ival = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + ival = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + ival = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + icvp->user_dim_size[0] = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + icvp->user_dim_size[1] = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + icvp->user_keep_aspect = value; + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + icvp->user_dim_size[idim] = value; + ^~~~~ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/image_conversion.c:173: /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqint': +/build/libminc-2.4.03/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + *value = dvalue; + ^~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) ^ @@ -2007,6 +2265,10 @@ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqlong': +/build/libminc-2.4.03/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + *value = dvalue; + ^~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) ^ @@ -2061,15 +2323,121 @@ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} ^~~~~~~~~~~~~~ -[ 18%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, + from /build/libminc-2.4.03/libsrc/image_conversion.c:173: +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' + *((unsigned char *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' + *((signed char *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' + *((unsigned short *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' + *((signed short *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' + *((unsigned int *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' + *((signed int *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' + *((float *) ptr) = MIN(FLT_MAX,dvalue); \ + ^~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miset_valid_range': +/build/libminc-2.4.03/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + fval[0] = valid_range[0]; + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + fval[1] = valid_range[1]; + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miattput_pointer': +/build/libminc-2.4.03/libsrc/minc_convenience.c:638:10: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] + index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); + ^~~~~~ +[ 21%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, + from /build/libminc-2.4.03/libsrc/minc_convenience.c:152: +/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miadd_child': +/build/libminc-2.4.03/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ + ^ +/build/libminc-2.4.03/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' + ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) + ^~~~~~~ +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:89, + from /build/libminc-2.4.03/libsrc/minc_convenience.c:152: +/build/libminc-2.4.03/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); + ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miset_valid_range': +/build/libminc-2.4.03/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + child_list_size += strlen(MI_CHILD_SEPARATOR); + ^~ +/build/libminc-2.4.03/libsrc/minc_convenience.c:765:26: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] + child_list_size += strlen(MI_CHILD_SEPARATOR); + ^~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] fval[0] = valid_range[0]; ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] fval[1] = valid_range[1]; ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + child_list_size -= strlen(MI_CHILD_SEPARATOR); + ^~ +/build/libminc-2.4.03/libsrc/minc_convenience.c:780:26: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] + child_list_size -= strlen(MI_CHILD_SEPARATOR); + ^~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miattput_pointer': /build/libminc-2.4.03/libsrc/minc_convenience.c:638:10: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); @@ -2091,6 +2459,7 @@ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) ^~~~~~~~~~~ +[ 22%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o /build/libminc-2.4.03/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] child_list_size += strlen(MI_CHILD_SEPARATOR); ^~ @@ -2103,12 +2472,32 @@ /build/libminc-2.4.03/libsrc/minc_convenience.c:780:26: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] child_list_size -= strlen(MI_CHILD_SEPARATOR); ^~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miappend_history': /build/libminc-2.4.03/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] att_val = malloc(att_len + strlen(tm_stamp) + 2); ^ -[ 18%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c +/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miappend_history': +/build/libminc-2.4.03/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + att_val = malloc(att_len + strlen(tm_stamp) + 2); + ^ +[ 22%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c +[ 23%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c +[ 23%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c +[ 24%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, + from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: +/build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miexpand_file': +/build/libminc-2.4.03/libsrc/netcdf_convenience.c:380:38: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char); + ^ +/build/libminc-2.4.03/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' + ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) + ^~~~~~~ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: /build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miexpand_file': @@ -2135,12 +2524,31 @@ /build/libminc-2.4.03/libsrc/netcdf_convenience.c:520:14: note: in expansion of macro 'H5F_ACC_RDONLY' hmode = H5F_ACC_RDONLY; ^~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/hdf5.h:27, + from /build/libminc-2.4.03/libsrc/minc.h:170, + from /build/libminc-2.4.03/libsrc/minc_private.h:83, + from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: +/build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miopen': +/usr/include/hdf5/serial/H5Fpublic.h:51:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + #define H5F_ACC_RDWR (H5CHECK H5OPEN 0x0001u) /*open for read and write */ + ^ +/build/libminc-2.4.03/libsrc/netcdf_convenience.c:517:14: note: in expansion of macro 'H5F_ACC_RDWR' + hmode = H5F_ACC_RDWR; + ^~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Fpublic.h:50:24: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + #define H5F_ACC_RDONLY (H5CHECK H5OPEN 0x0000u) /*absence of rdwr => rd-only */ + ^ +/build/libminc-2.4.03/libsrc/netcdf_convenience.c:520:14: note: in expansion of macro 'H5F_ACC_RDONLY' + hmode = H5F_ACC_RDONLY; + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miattputstr': +/build/libminc-2.4.03/libsrc/netcdf_convenience.c:1033:38: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] + strlen(value) + 1, value); + ~~~~~~~~~~~~~~^~~ /build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miattputstr': /build/libminc-2.4.03/libsrc/netcdf_convenience.c:1033:38: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] strlen(value) + 1, value); ~~~~~~~~~~~~~~^~~ -[ 18%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c /build/libminc-2.4.03/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.03/libsrc/value_conversion.c:622:49: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] (size_t) number_of_values*inincr); @@ -2210,73 +2618,97 @@ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} ^~~~~~~~~~~~~~ -[ 19%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c -[ 19%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c -/build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': -/build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - files = malloc(sizeof(*files) * array_size); - ^ -/build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - files = realloc(files, sizeof(*files) * array_size); - ^ -/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': -/build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - numSpaces = width + 1 - strlen(infoPtr->key); - ^ -/build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] - numSpaces = width + 1 - strlen(infoPtr->key); - ^~~~~ -[ 20%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c -/build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': -/build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'unsigned int'} changes value from '-1' to '4294967295' [-Wsign-conversion] - offset_next = -1; /* Initialize. */ - ^ -/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] - #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) - ^ -/build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' - BIT_SET(bitmap, offset_start); - ^~~~~~~ -/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] - #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) - ^ -/build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' - BIT_SET(bitmap, offset_next); - ^~~~~~~ -[ 20%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c -[ 20%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o +/build/libminc-2.4.03/libsrc/value_conversion.c: In function 'MI_convert_type': +/build/libminc-2.4.03/libsrc/value_conversion.c:622:49: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + (size_t) number_of_values*inincr); + ^ +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, + from /build/libminc-2.4.03/libsrc/value_conversion.c:98: +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' + *((unsigned char *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' + *((signed char *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' + *((unsigned short *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' + *((signed short *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' + *((unsigned int *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' + *((signed int *) ptr) = ROUND(dvalue); \ + ^~~~~ +/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' + *((float *) ptr) = MIN(FLT_MAX,dvalue); \ + ^~~ +/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' + {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'update_history': +/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + att_length += strlen(arg_string) + 1; + ^~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:18: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] + att_length += strlen(arg_string) + 1; + ^~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'update_history': +/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + att_length += strlen(arg_string) + 1; + ^~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:18: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] + att_length += strlen(arg_string) + 1; + ^~~~~~ +[ 24%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c -[ 20%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -[ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c -[ 22%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c -[ 22%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c -[ 23%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c -[ 23%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c -[ 23%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -[ 24%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c +[ 25%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c +[ 26%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o +[ 26%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c -/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miset_valid_range': -/build/libminc-2.4.03/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - fval[0] = valid_range[0]; - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - fval[1] = valid_range[1]; - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miattput_pointer': -/build/libminc-2.4.03/libsrc/minc_convenience.c:638:10: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] - index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); - ^~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_var_add': /build/libminc-2.4.03/libsrc/hdf_convenience.c:202:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); @@ -2289,35 +2721,6 @@ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) ^~~~~~~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, - from /build/libminc-2.4.03/libsrc/minc_convenience.c:152: -/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miadd_child': -/build/libminc-2.4.03/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ - ^ -/build/libminc-2.4.03/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' - ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) - ^~~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:89, - from /build/libminc-2.4.03/libsrc/minc_convenience.c:152: -/build/libminc-2.4.03/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); - ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - child_list_size += strlen(MI_CHILD_SEPARATOR); - ^~ -/build/libminc-2.4.03/libsrc/minc_convenience.c:765:26: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] - child_list_size += strlen(MI_CHILD_SEPARATOR); - ^~~~~~ -/build/libminc-2.4.03/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - child_list_size -= strlen(MI_CHILD_SEPARATOR); - ^~ -/build/libminc-2.4.03/libsrc/minc_convenience.c:780:26: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] - child_list_size -= strlen(MI_CHILD_SEPARATOR); - ^~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_size': /build/libminc-2.4.03/libsrc/hdf_convenience.c:370:20: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] int typ_size = H5Tget_size(typ_id); @@ -2336,65 +2739,10 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:581:25: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] *length_ptr = H5Sget_simple_extent_npoints(spc_id); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miappend_history': -/build/libminc-2.4.03/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - att_val = malloc(att_len + strlen(tm_stamp) + 2); - ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_get_dimorder': /build/libminc-2.4.03/libsrc/hdf_convenience.c:667:14: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] length = H5Tget_size(typ_id); ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': -/build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - icvp->user_do_range = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - icvp->user_do_norm = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - icvp->user_user_norm = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - icvp->user_do_fillvalue = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - icvp->user_do_dimconv = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - icvp->user_do_scalar = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - ival = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - ival = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - ival = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - ival = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - icvp->user_dim_size[0] = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - icvp->user_dim_size[1] = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - icvp->user_keep_aspect = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - icvp->user_dim_size[idim] = value; - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqint': -/build/libminc-2.4.03/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - *value = dvalue; - ^~~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqlong': -/build/libminc-2.4.03/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - *value = dvalue; - ^~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_dimdef': /build/libminc-2.4.03/libsrc/hdf_convenience.c:958:49: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] hdf_set_length(var->dset_id, dimnm, length); @@ -2436,118 +2784,6 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1418:42: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] hdf_set_length(dst_id, varnm, dim->length); ~~~^~~~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, - from /build/libminc-2.4.03/libsrc/image_conversion.c:173: -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' - *((unsigned char *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' - *((signed char *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' - *((unsigned short *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' - *((signed short *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' - *((unsigned int *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' - *((signed int *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' - *((float *) ptr) = MIN(FLT_MAX,dvalue); \ - ^~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'update_history': -/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - att_length += strlen(arg_string) + 1; - ^~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:18: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] - att_length += strlen(arg_string) + 1; - ^~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, - from /build/libminc-2.4.03/libsrc/dim_conversion.c:93: -/build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert': -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' - *((unsigned char *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' - *((signed char *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' - *((unsigned short *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' - *((signed short *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varget': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1534:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] fstart[i] = start_ptr[i]; @@ -2555,118 +2791,28 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1535:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] count[i] = length_ptr[i]; ^~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' - *((unsigned int *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' - *((signed int *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varputg': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1633:45: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); ~~~~~~~~~~~~^~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' - *((float *) ptr) = MIN(FLT_MAX,dvalue); \ - ^~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1649:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] mystart[idim] = start != NULL ? start[idim] : 0; ^~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1658:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] myedges[idim] = edges[idim]; ^~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' - *((unsigned char *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1682:29: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'ptrdiff_t' {aka 'int'} may change the sign of the result [-Wsign-conversion] length[idim] = mymap[idim] * myedges[idim]; ^ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' - *((signed char *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1683:45: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'ptrdiff_t' {aka 'int'} may change the sign of the result [-Wsign-conversion] stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; ^ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' - *((unsigned short *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' - *((signed short *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' - *((unsigned int *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1740:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'ptrdiff_t' {aka 'int'} may change the sign of the result [-Wsign-conversion] mystart[idim] += mystride[idim]; ^~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' - *((signed int *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1742:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] mystart[idim] = start[idim]; ^~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' - *((float *) ptr) = MIN(FLT_MAX,dvalue); \ - ^~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_vargetg': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1810:42: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); @@ -2684,10 +2830,22 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1958:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] count[i] = length_ptr[i]; ^~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_var_add': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:202:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); + ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varsize': /build/libminc-2.4.03/libsrc/hdf_convenience.c:2069:23: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'long int' may change value [-Wconversion] size_ptr[i] = dims[i]; ^~~~ +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:89, + from /build/libminc-2.4.03/libsrc/hdf_convenience.c:8: +/build/libminc-2.4.03/libsrc/hdf_convenience.c:209:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + MI_LOG_ERROR(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims); + ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_copy_attr': /build/libminc-2.4.03/libsrc/hdf_convenience.c:2103:26: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) @@ -2696,12 +2854,23 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2223:117: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_size': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:370:20: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] + int typ_size = H5Tget_size(typ_id); + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:371:20: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] + int spc_size = H5Sget_simple_extent_npoints(spc_id); + ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2239:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] file_id = H5Fopen(path, mode, fpid); ^~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2249:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] file->wr_ok = (mode & H5F_ACC_RDWR) != 0; ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attname': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:455:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + att_id = H5Aopen_idx(loc_id, attnum); + ^~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2271:37: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] dims[ndims++] = H5Tget_nmembers(type_id); ^~~~~~~~~~~~~~~ @@ -2719,6 +2888,13 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2337:15: note: in expansion of macro 'H5F_ACC_EXCL' cmode = H5F_ACC_EXCL; ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attinq': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:578:25: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] + *length_ptr = typ_size; + ^~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:581:25: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] + *length_ptr = H5Sget_simple_extent_npoints(spc_id); + ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Fpublic.h:52:23: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] #define H5F_ACC_TRUNC (H5CHECK H5OPEN 0x0002u) /*overwrite existing files */ ^ @@ -2728,184 +2904,6 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2347:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); ^~~~~ -[ 25%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c -/build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': -/build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - val_ptr = malloc(MI2typelen(att_type) * att_length); - ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, - from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: -/build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miexpand_file': -/build/libminc-2.4.03/libsrc/netcdf_convenience.c:380:38: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char); - ^ -/build/libminc-2.4.03/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' - ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) - ^~~~~~~ -In file included from /usr/include/hdf5/serial/hdf5.h:27, - from /build/libminc-2.4.03/libsrc/minc.h:170, - from /build/libminc-2.4.03/libsrc/minc_private.h:83, - from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: -/build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miopen': -/usr/include/hdf5/serial/H5Fpublic.h:51:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - #define H5F_ACC_RDWR (H5CHECK H5OPEN 0x0001u) /*open for read and write */ - ^ -/build/libminc-2.4.03/libsrc/netcdf_convenience.c:517:14: note: in expansion of macro 'H5F_ACC_RDWR' - hmode = H5F_ACC_RDWR; - ^~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Fpublic.h:50:24: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - #define H5F_ACC_RDONLY (H5CHECK H5OPEN 0x0000u) /*absence of rdwr => rd-only */ - ^ -/build/libminc-2.4.03/libsrc/netcdf_convenience.c:520:14: note: in expansion of macro 'H5F_ACC_RDONLY' - hmode = H5F_ACC_RDONLY; - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miattputstr': -/build/libminc-2.4.03/libsrc/netcdf_convenience.c:1033:38: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] - strlen(value) + 1, value); - ~~~~~~~~~~~~~~^~~ -/build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': -/build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - ucount[j++] = dim_len[i]; - ^~~~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), - ^~~~~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc.h:172, - from /build/libminc-2.4.03/libsrc/minc_private.h:83, - from /build/libminc-2.4.03/libsrc/minc_simple.c:38: -/build/libminc-2.4.03/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - #define nctypelen MI2typelen -/build/libminc-2.4.03/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen' - restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), - ^~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:416:77: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * - ^ -/build/libminc-2.4.03/libsrc/minc_simple.c:419:77: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * - ^ -/build/libminc-2.4.03/libsrc/minc_simple.c:431:48: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); - ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:446:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - p_var->var_atts = malloc(p_var->var_natts * - ^ -/build/libminc-2.4.03/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); - ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 25%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c -/build/libminc-2.4.03/libsrc/value_conversion.c: In function 'MI_convert_type': -/build/libminc-2.4.03/libsrc/value_conversion.c:622:49: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - (size_t) number_of_values*inincr); - ^ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, - from /build/libminc-2.4.03/libsrc/value_conversion.c:98: -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' - *((unsigned char *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' - *((signed char *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' - *((unsigned short *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' - *((signed short *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' - *((unsigned int *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' - *((signed int *) ptr) = ROUND(dvalue); \ - ^~~~~ -/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' - *((float *) ptr) = MIN(FLT_MAX,dvalue); \ - ^~~ -/build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' - {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} - ^~~~~~~~~~~~~~ -[ 26%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c -/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'update_history': -/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - att_length += strlen(arg_string) + 1; - ^~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:18: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] - att_length += strlen(arg_string) + 1; - ^~~~~~ -[ 27%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_var_add': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:202:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); - ^ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:89, - from /build/libminc-2.4.03/libsrc/hdf_convenience.c:8: -/build/libminc-2.4.03/libsrc/hdf_convenience.c:209:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - MI_LOG_ERROR(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims); - ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_size': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:370:20: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] - int typ_size = H5Tget_size(typ_id); - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:371:20: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] - int spc_size = H5Sget_simple_extent_npoints(spc_id); - ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attname': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:455:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - att_id = H5Aopen_idx(loc_id, attnum); - ^~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attinq': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:578:25: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] - *length_ptr = typ_size; - ^~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:581:25: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] - *length_ptr = H5Sget_simple_extent_npoints(spc_id); - ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_get_dimorder': /build/libminc-2.4.03/libsrc/hdf_convenience.c:667:14: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] length = H5Tget_size(typ_id); @@ -3005,6 +3003,14 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2103:26: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) ^~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': +/build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': +/build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + val_ptr = malloc(MI2typelen(att_type) * att_length); + ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + val_ptr = malloc(MI2typelen(att_type) * att_length); + ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_open': /build/libminc-2.4.03/libsrc/hdf_convenience.c:2223:117: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); @@ -3041,26 +3047,28 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2347:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); ^~~~~ +[ 26%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o +[ 26%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c +[ 27%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c [ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c -[ 27%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c -[ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c -[ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c -[ 28%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c -/build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': -/build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - val_ptr = malloc(MI2typelen(att_type) * att_length); - ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -[ 29%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o +[ 28%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c -[ 29%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o +[ 28%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c -[ 29%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.03/volume_io/Geometry/inverse.c +[ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c +[ 29%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o +[ 29%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c +[ 30%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c +[ 31%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o +[ 31%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o /build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': /build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] ucount[j++] = dim_len[i]; @@ -3091,78 +3099,102 @@ /build/libminc-2.4.03/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 30%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c -[ 30%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c -[ 31%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.03/volume_io/Geometry/inverse.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.03/volume_io/Geometry/inverse.c [ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.03/volume_io/Geometry/newton.c -[ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c +/build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': +/build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + ucount[j++] = dim_len[i]; + ^~~~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), + ^~~~~~~~~ +In file included from /build/libminc-2.4.03/libsrc/minc.h:172, + from /build/libminc-2.4.03/libsrc/minc_private.h:83, + from /build/libminc-2.4.03/libsrc/minc_simple.c:38: +/build/libminc-2.4.03/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + #define nctypelen MI2typelen +/build/libminc-2.4.03/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen' + restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), + ^~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:416:77: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * + ^ +/build/libminc-2.4.03/libsrc/minc_simple.c:419:77: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * + ^ +/build/libminc-2.4.03/libsrc/minc_simple.c:431:48: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); + ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:446:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + p_var->var_atts = malloc(p_var->var_natts * + ^ +/build/libminc-2.4.03/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); + ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 32%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.03/volume_io/Geometry/newton.c -[ 32%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c -[ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c +[ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c +[ 33%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o [ 33%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.03/volume_io/Geometry/splines.c [ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.03/volume_io/Geometry/splines.c -[ 35%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o +[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c +[ 34%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c +[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c +[ 36%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c -[ 35%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o +[ 36%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c -[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -[ 35%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o +[ 36%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c +[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c +[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c +[ 37%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c -[ 36%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c -[ 37%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o +[ 38%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c -[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c +[ 38%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] volume_filename = alloc_string( string_length(prefix_filename) + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 100 ); ~~~ -[ 38%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c -[ 38%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c -[ 39%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] volume_filename = alloc_string( string_length(prefix_filename) + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 100 ); ~~~ -[ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c +[ 39%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c [ 39%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c -[ 39%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c -[ 40%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c -[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o +[ 40%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c -[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o +[ 40%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c +[ 40%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c -[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -[ 43%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o +[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -c 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-D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c +[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc_check.c -[ 43%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_in_bytes': /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c:247:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] print_error( "Cannot alloc 1D array of %lu bytes.\n", n_bytes ); @@ -3312,12 +3344,6 @@ %u n_elements ); ~~~~~~~~~~ -[ 43%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc_check.c -[ 44%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c -[ 44%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_in_bytes': /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c:247:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] print_error( "Cannot alloc 1D array of %lu bytes.\n", n_bytes ); @@ -3467,7 +3493,19 @@ %u n_elements ); ~~~~~~~~~~ -[ 45%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o +[ 43%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/arrays.c +[ 43%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/arrays.c +[ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c +[ 44%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c +[ 45%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c +[ 45%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c +[ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c /build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': /build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] @@ -3491,32 +3529,8 @@ /build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] *str = alloc_string( length ); ^~~~~~ -[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/arrays.c -/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': -/build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - str = alloc_string( string_length(initial) ); - ^~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': -/build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - stripped = alloc_string( last_non_blank - first_non_blank + 1 ); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -[ 45%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c -[ 45%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c -[ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c -[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c -[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o +[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c -[ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c -[ 48%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c -[ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c /build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': /build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] directory = alloc_string( slash_index ); @@ -3539,6 +3553,32 @@ /build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] *str = alloc_string( length ); ^~~~~~ +[ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o +[ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c +[ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c +[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c +[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c +[ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c +[ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c +[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c +/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': +/build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + str = alloc_string( string_length(initial) ); + ^~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': +/build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + stripped = alloc_string( last_non_blank - first_non_blank + 1 ); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ +[ 50%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] coefs[c] = outside_value; @@ -3546,19 +3586,6 @@ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] out_rgb[i] = c0 + w * dw; ^~ -[ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - ^ -[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c -[ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c /build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': /build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] str = alloc_string( string_length(initial) ); @@ -3567,16 +3594,8 @@ /build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] stripped = alloc_string( last_non_blank - first_non_blank + 1 ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -[ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c -[ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c -[ 51%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -[ 52%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c -[ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c +[ 50%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] coefs[c] = outside_value; @@ -3584,17 +3603,33 @@ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] out_rgb[i] = c0 + w * dw; ^~ +[ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + ^ +[ 52%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c +[ 52%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c [ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c +[ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c +[ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c +[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c +[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] new_history = alloc_string( old_att_length ); ^~~~~~~~~~~~~~ -[ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c -[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c -[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); @@ -3602,15 +3637,20 @@ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); ^ -[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c +[ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c +[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c +[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c -[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o +[ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c -[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c -[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c +[ 56%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + new_history = alloc_string( old_att_length ); + ^~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); @@ -3618,6 +3658,8 @@ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); ^ +[ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] ((signed char *) dst)[i] = value; @@ -3648,6 +3690,8 @@ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); ^ +[ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); @@ -3686,10 +3730,14 @@ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; ^~~~ -[ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o +[ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c -[ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c +[ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c +[ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c +[ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] long_file_start[file_ind] = (long) file_start[file_ind]; @@ -3697,23 +3745,12 @@ /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] long_file_count[file_ind] = (long) file_count[file_ind]; ^ +[ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); ~~~~^~~~~~~~~~~~~~~~~~~ -[ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - new_history = alloc_string( old_att_length ); - ^~~~~~~~~~~~~~ -[ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c -[ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c -[ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c -[ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); @@ -3751,7 +3788,6 @@ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); ^ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); @@ -3790,8 +3826,6 @@ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; ^~~~ -[ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] long_file_start[file_ind] = (long) file_start[file_ind]; @@ -3807,85 +3841,223 @@ /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc2.so.5.2.0 -o libminc2.so.5.2.0 CMakeFiles/minc2.dir/libsrc2/convert.c.o CMakeFiles/minc2.dir/libsrc2/datatype.c.o CMakeFiles/minc2.dir/libsrc2/dimension.c.o CMakeFiles/minc2.dir/libsrc2/free.c.o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o CMakeFiles/minc2.dir/libsrc2/hyper.c.o CMakeFiles/minc2.dir/libsrc2/label.c.o CMakeFiles/minc2.dir/libsrc2/m2util.c.o CMakeFiles/minc2.dir/libsrc2/record.c.o CMakeFiles/minc2.dir/libsrc2/slice.c.o CMakeFiles/minc2.dir/libsrc2/valid.c.o CMakeFiles/minc2.dir/libsrc2/volprops.c.o CMakeFiles/minc2.dir/libsrc2/volume.c.o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o CMakeFiles/minc2.dir/libcommon/minc_config.c.o CMakeFiles/minc2.dir/libcommon/minc_error.c.o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o CMakeFiles/minc2.dir/libcommon/restructure.c.o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o 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CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial: /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lnetcdf -lm -ldl -lnetcdf -ldl -lm -lrt -lnetcdf -lm -ldl -lnetcdf -lm -ldl /usr/bin/cmake -E cmake_symlink_library libminc2.so.5.2.0 libminc2.so.5.2.0 libminc2.so +[ 60%] Linking C static library libminc2_static.a +/usr/bin/cmake -P CMakeFiles/minc2_static.dir/cmake_clean_target.cmake +/usr/bin/cmake -E cmake_link_script CMakeFiles/minc2_static.dir/link.txt --verbose=1 make[3]: Leaving directory 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CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o +[ 60%] Built target minc2 make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/depend make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/depend make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend +make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend +make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend +make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir 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'/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color= -Scanning dependencies of target icv +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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/build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= +Scanning dependencies of target minc2-hyper-test-2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build -Scanning dependencies of target minc_conversion +make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build Scanning dependencies of target minc_io make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +Scanning dependencies of target icv_range make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +Scanning dependencies of target icv Scanning dependencies of target minc2-volprops-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build +Scanning dependencies of target minc_conversion Scanning dependencies of target minc2-leak-test +Scanning dependencies of target mincapi make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build +Scanning dependencies of target minc_long_attr +make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build +Scanning dependencies of target test_mconv make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +Scanning dependencies of target copy_xfm +make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -Scanning dependencies of target copy_xfm make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build -[ 59%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o -Scanning dependencies of target mincapi +Scanning dependencies of target minc_types +Scanning dependencies of target minc2-vector_dimension-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv.dir/icv.c.o -c /build/libminc-2.4.03/testdir/icv.c +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build +make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 59%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -Scanning dependencies of target icv_range make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build -[ 59%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o +make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build +Scanning dependencies of target minc2-multires-test +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +Scanning dependencies of target minc2-create-test-images-2 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +Scanning dependencies of target icv_vec +make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +Scanning dependencies of target icv_dim1 +[ 61%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o +[ 61%] Built target minc2_static +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test-2.c +make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 61%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_rw.cpp -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /build/libminc-2.4.03/testdir/minc_conversion.c make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 59%] Building C object testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -[ 59%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -c /build/libminc-2.4.03/testdir/minc2-leak-test.c +make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend +[ 62%] Building C object testdir/CMakeFiles/icv_range.dir/icv_range.c.o +[ 62%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -c /build/libminc-2.4.03/testdir/minc2-volprops-test.c -[ 59%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_range.dir/icv_range.c.o -c /build/libminc-2.4.03/testdir/icv_range.c +[ 62%] Building C object testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o +[ 62%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -c /build/libminc-2.4.03/testdir/minc2-leak-test.c +[ 62%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv.dir/icv.c.o -c /build/libminc-2.4.03/testdir/icv.c +[ 62%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /build/libminc-2.4.03/testdir/minc_conversion.c +[ 62%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o +[ 62%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o +[ 62%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o +[ 63%] Building C object testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /build/libminc-2.4.03/testdir/minc_long_attr.c cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/copy-xfm.c -[ 59%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_types.dir/minc_types.c.o -c /build/libminc-2.4.03/testdir/minc_types.c cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/mincapi.dir/mincapi.c.o -c /build/libminc-2.4.03/testdir/mincapi.c -[ 60%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_simple_rw.cpp -[ 61%] Building C object testdir/CMakeFiles/icv_range.dir/icv_range.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_range.dir/icv_range.c.o -c /build/libminc-2.4.03/testdir/icv_range.c -[ 62%] Linking C static library libminc2_static.a -/usr/bin/cmake -P CMakeFiles/minc2_static.dir/cmake_clean_target.cmake -/usr/bin/cmake -E cmake_link_script CMakeFiles/minc2_static.dir/link.txt --verbose=1 +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_mconv.dir/test_mconv.c.o -c /build/libminc-2.4.03/testdir/test_mconv.c +[ 64%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c +[ 64%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /build/libminc-2.4.03/testdir/minc2-multires-test.c +[ 65%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o +[ 65%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /build/libminc-2.4.03/testdir/icv_vec.c +[ 65%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim1.dir/icv_dim1.c.o -c /build/libminc-2.4.03/testdir/icv_dim1.c +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c +Scanning dependencies of target volume_test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c: In function 'create_test_file': +/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + start[0] = i; + ^ +/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c: In function 'main': +/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c:145:65: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + buffer = ( double * ) malloc ( count[0] * count[1] * count[2] * sizeof ( double ) ); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +[ 65%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_test.dir/volume_test.c.o -c /build/libminc-2.4.03/testdir/volume_test.c +/build/libminc-2.4.03/testdir/minc2-multires-test.c: In function 'main': +/build/libminc-2.4.03/testdir/minc2-multires-test.c:79:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[0] = i; + ^ +/build/libminc-2.4.03/testdir/minc2-multires-test.c:80:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[1] = j; + ^ +/build/libminc-2.4.03/testdir/minc2-multires-test.c:81:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[2] = k; + ^ +/build/libminc-2.4.03/testdir/minc2-multires-test.c:83:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + voxel = i*10000 + j*100 + k; + ^ +/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c: In function 'main': +/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:131:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[3] = i; + ^ +/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:166:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[0] = i; + ^ +/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c: In function 'create_real_as_int_image': +/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:78:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + start[0] = i; + ^ +/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c: In function 'create_real_as_float_image': +/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:143:17: warning: conversion from 'int' to 'float' may change value [-Wconversion] + buf[i] = i * 0.001f; + ^ +/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:154:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + start[0] = i; + ^ +/build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'hdf5_check_objects': +/build/libminc-2.4.03/testdir/minc2-leak-test.c:58:21: warning: conversion to 'unsigned int' from 'ssize_t' {aka 'int'} may change the sign of the result [-Wsign-conversion] + objs = malloc(cnt * sizeof(hid_t)); + ^ +/build/libminc-2.4.03/testdir/minc2-leak-test.c:60:46: warning: conversion to 'size_t' {aka 'unsigned int'} from 'ssize_t' {aka 'int'} may change the sign of the result [-Wsign-conversion] + howmany = H5Fget_obj_ids(fid, H5F_OBJ_ALL, cnt, objs); + ^~~ /build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test2': /build/libminc-2.4.03/testdir/minc_conversion.c:156:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] float tmp = (i * 10000.0f) + (j * 100.0f) + k; @@ -3900,6 +4072,17 @@ /build/libminc-2.4.03/testdir/minc_conversion.c:192:11: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] total *= dims[i].length; ^~ +/build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'leak_loop': +/build/libminc-2.4.03/testdir/minc2-leak-test.c:113:40: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + buffer = (double *) malloc( n_voxels * sizeof(double)); + ^ +/build/libminc-2.4.03/testdir/minc_long_attr.c: In function 'test1': +/build/libminc-2.4.03/testdir/minc_long_attr.c:125:32: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + ip->large_attribute=calloc(ip->attribute_size,sizeof(char)); + ~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/testdir/minc_long_attr.c:126:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + memset(ip->large_attribute,'X',ip->attribute_size-1); + ~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.03/testdir/minc_conversion.c:263:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] float tmp = (i * 10000.0f) + (j * 100.0f) + k; ^ @@ -3909,28 +4092,14 @@ /build/libminc-2.4.03/testdir/minc_conversion.c:263:51: warning: conversion from 'int' to 'float' may change value [-Wconversion] float tmp = (i * 10000.0f) + (j * 100.0f) + k; ^ -/build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test4': -/build/libminc-2.4.03/testdir/minc_conversion.c:351:62: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - buffer=flt_ptr=malloc(sizeof(float)*my_sizes[0]*my_sizes[1]*my_sizes[2]); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -/build/libminc-2.4.03/testdir/minc_conversion.c:368:21: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'float' may change value [-Wconversion] - float tmp = (i * 10000) + (j * 100) + k; - ^ -/build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'hdf5_check_objects': -/build/libminc-2.4.03/testdir/minc2-leak-test.c:58:21: warning: conversion to 'unsigned int' from 'ssize_t' {aka 'int'} may change the sign of the result [-Wsign-conversion] - objs = malloc(cnt * sizeof(hid_t)); - ^ -/build/libminc-2.4.03/testdir/minc2-leak-test.c:60:46: warning: conversion to 'size_t' {aka 'unsigned int'} from 'ssize_t' {aka 'int'} may change the sign of the result [-Wsign-conversion] - howmany = H5Fget_obj_ids(fid, H5F_OBJ_ALL, cnt, objs); - ^~~ -/build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'leak_loop': -/build/libminc-2.4.03/testdir/minc2-leak-test.c:113:40: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - buffer = (double *) malloc( n_voxels * sizeof(double)); - ^ /build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'create_test_image': /build/libminc-2.4.03/testdir/minc2-leak-test.c:235:41: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] buf = ( uint16_t * ) malloc ( nvoxels * sizeof ( uint16_t ) ); ^ +/build/libminc-2.4.03/testdir/minc_long_attr.c: In function 'test3': +/build/libminc-2.4.03/testdir/minc_long_attr.c:207:11: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + total *= dims[i].length; + ^~ /build/libminc-2.4.03/testdir/minc2-leak-test.c:253:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] start[0] = i; ^ @@ -3938,7 +4107,19 @@ /build/libminc-2.4.03/testdir/minc2-leak-test.c:306:46: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] result = miget_dimension_sizes(dimensions, ndims, sizes); ^~~~~ -/usr/bin/ar qc libminc2_static.a CMakeFiles/minc2_static.dir/libsrc2/convert.c.o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o CMakeFiles/minc2_static.dir/libsrc2/free.c.o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o CMakeFiles/minc2_static.dir/libsrc2/label.c.o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o CMakeFiles/minc2_static.dir/libsrc2/record.c.o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o +/build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test4': +/build/libminc-2.4.03/testdir/minc_conversion.c:351:62: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + buffer=flt_ptr=malloc(sizeof(float)*my_sizes[0]*my_sizes[1]*my_sizes[2]); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +/build/libminc-2.4.03/testdir/minc_long_attr.c:257:14: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + att=malloc(att_length); + ^~~~~~~~~~ +/build/libminc-2.4.03/testdir/minc_long_attr.c:262:37: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + if(memcmp(att,ip->large_attribute,att_length)!=0) + ^~~~~~~~~~ +/build/libminc-2.4.03/testdir/minc_conversion.c:368:21: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'float' may change value [-Wconversion] + float tmp = (i * 10000) + (j * 100) + k; + ^ /build/libminc-2.4.03/testdir/mincapi.c: In function 'test3': /build/libminc-2.4.03/testdir/mincapi.c:209:11: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] total *= dims[i].length; @@ -3964,126 +4145,6 @@ /build/libminc-2.4.03/testdir/mincapi.c:644:11: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] total *= dims[i].length; ^~ -[ 63%] Linking C executable icv -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 -[ 64%] Linking C executable minc2-volprops-test -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -o minc2-volprops-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 64%] Linking C executable copy_xfm -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 -[ 65%] Linking C executable minc2-leak-test -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -o copy_xfm -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-i686-linux-gnu /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-leak-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -o minc2-leak-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 65%] Linking C executable icv_range -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_range.dir/link.txt --verbose=1 -/usr/bin/ranlib libminc2_static.a -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 65%] Built target icv -make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 65%] Built target minc2-volprops-test -make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= -Scanning dependencies of target minc2-vector_dimension-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 66%] Linking C executable minc_conversion -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_conversion.dir/link.txt --verbose=1 -[ 66%] Built target minc2_static -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend -[ 66%] Built target copy_xfm -make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend -Scanning dependencies of target minc_long_attr -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 67%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -Scanning dependencies of target minc2-hyper-test-2 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build -[ 67%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /build/libminc-2.4.03/testdir/minc_long_attr.c -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 67%] Built target minc2-leak-test -make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend -[ 68%] Linking C executable mincapi -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 -Scanning dependencies of target test_mconv -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build -[ 68%] Built target icv_range -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend -[ 69%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test-2.c -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color= -Scanning dependencies of target minc_types -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 70%] Building C object testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_mconv.dir/test_mconv.c.o -c /build/libminc-2.4.03/testdir/test_mconv.c -/build/libminc-2.4.03/testdir/minc_long_attr.c: In function 'test1': -/build/libminc-2.4.03/testdir/minc_long_attr.c:125:32: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - ip->large_attribute=calloc(ip->attribute_size,sizeof(char)); - ~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/testdir/minc_long_attr.c:126:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - memset(ip->large_attribute,'X',ip->attribute_size-1); - ~~~~~~~~~~~~~~~~~~^~ -/build/libminc-2.4.03/testdir/minc_long_attr.c: In function 'test3': -/build/libminc-2.4.03/testdir/minc_long_attr.c:207:11: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - total *= dims[i].length; - ^~ -/build/libminc-2.4.03/testdir/minc_long_attr.c:257:14: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - att=malloc(att_length); - ^~~~~~~~~~ -/build/libminc-2.4.03/testdir/minc_long_attr.c:262:37: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - if(memcmp(att,ip->large_attribute,att_length)!=0) - ^~~~~~~~~~ -/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c: In function 'main': -/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:131:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[3] = i; - ^ -/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:166:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[0] = i; - ^ -[ 70%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_types.dir/minc_types.c.o -c /build/libminc-2.4.03/testdir/minc_types.c -Scanning dependencies of target icv_vec -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build -/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c: In function 'create_test_file': -/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - start[0] = i; - ^ -/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c: In function 'main': -/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c:145:65: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - buffer = ( double * ) malloc ( count[0] * count[1] * count[2] * sizeof ( double ) ); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 71%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /build/libminc-2.4.03/testdir/icv_vec.c /build/libminc-2.4.03/testdir/icv_vec.c: In function 'test_icv_vector': /build/libminc-2.4.03/testdir/icv_vec.c:65:41: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] short int *ivalue = malloc(N_ELEMENTS * sizeof(short int)); @@ -4097,201 +4158,180 @@ /build/libminc-2.4.03/testdir/icv_vec.c:126:23: note: in expansion of macro 'TVAL' ivalue[c] = TVAL(i, j, k, v); ^~~~ -[ 71%] Linking C executable test_mconv +[ 65%] Linking C executable test_mconv cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mconv.dir/link.txt --verbose=1 -[ 71%] Linking C executable minc2-hyper-test-2 -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -o minc2-hyper-test-2 -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 71%] Built target minc_conversion -make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend -[ 71%] Built target mincapi -[ 72%] Linking C executable minc_types -[ 72%] Linking C executable minc2-vector_dimension-test -make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend +[ 66%] Linking C executable minc2-volprops-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1 +[ 67%] Linking C executable icv +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -o minc2-volprops-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 67%] Linking C executable copy_xfm +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 67%] Linking C executable minc2-hyper-test-2 +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -o copy_xfm -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-i686-linux-gnu /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +[ 68%] Linking C executable icv_dim1 +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 +[ 69%] Linking C executable minc_types cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 +[ 70%] Linking C executable minc2-multires-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -o minc2-hyper-test-2 -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -o minc2-multires-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 70%] Linking C executable minc2-vector_dimension-test cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -o minc2-vector_dimension-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 70%] Linking C executable icv_range +[ 71%] Linking C executable minc2-create-test-images-2 +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_range.dir/link.txt --verbose=1 +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -o minc2-create-test-images-2 -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 72%] Linking C executable minc2-leak-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-leak-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -o minc2-leak-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 72%] Built target test_mconv +make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color= [ 73%] Linking C executable minc_long_attr cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -o minc2-vector_dimension-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -Scanning dependencies of target minc2-multires-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -o minc_long_attr -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -Scanning dependencies of target minc2-create-test-images-2 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 73%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /build/libminc-2.4.03/testdir/minc2-multires-test.c -[ 73%] Linking C executable icv_vec -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 -[ 73%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c: In function 'create_real_as_int_image': -/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:78:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - start[0] = i; - ^ -/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c: In function 'create_real_as_float_image': -/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:143:17: warning: conversion from 'int' to 'float' may change value [-Wconversion] - buf[i] = i * 0.001f; - ^ -/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:154:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - start[0] = i; - ^ -/build/libminc-2.4.03/testdir/minc2-multires-test.c: In function 'main': -/build/libminc-2.4.03/testdir/minc2-multires-test.c:79:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[0] = i; - ^ -/build/libminc-2.4.03/testdir/minc2-multires-test.c:80:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[1] = j; - ^ -/build/libminc-2.4.03/testdir/minc2-multires-test.c:81:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[2] = k; - ^ -/build/libminc-2.4.03/testdir/minc2-multires-test.c:83:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - voxel = i*10000 + j*100 + k; - ^ -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +Scanning dependencies of target icv_dim make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 73%] Built target test_mconv -make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend -make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= -[ 73%] Built target minc_types +make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend -[ 73%] Built target minc2-hyper-test-2 +[ 73%] Built target minc2-volprops-test make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= -Scanning dependencies of target icv_dim1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 73%] Built target minc2-vector_dimension-test +[ 73%] Built target icv make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend -Scanning dependencies of target icv_dim -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build -Scanning dependencies of target volume_test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build +[ 73%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /build/libminc-2.4.03/testdir/icv_dim.c +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' Scanning dependencies of target minc2-read-metadata make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 73%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim1.dir/icv_dim1.c.o -c /build/libminc-2.4.03/testdir/icv_dim1.c Scanning dependencies of target minc_tst -[ 74%] Linking C executable minc2-multires-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 75%] Linking C executable minc2-create-test-images-2 make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 -[ 75%] Built target minc_long_attr +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 73%] Built target copy_xfm make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend -[ 75%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o -[ 75%] Built target icv_vec -make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /build/libminc-2.4.03/testdir/icv_dim.c make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 73%] Linking C executable icv_vec +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 +[ 73%] Building C object testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /build/libminc-2.4.03/testdir/minc2-read-metadata.c +[ 73%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o +[ 73%] Built target icv_dim1 +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_tst.dir/minc.c.o -c /build/libminc-2.4.03/testdir/minc.c +[ 73%] Built target minc2-hyper-test-2 +make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend +make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= -[ 75%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o -[ 75%] Building C object testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_test.dir/volume_test.c.o -c /build/libminc-2.4.03/testdir/volume_test.c -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /build/libminc-2.4.03/testdir/minc2-read-metadata.c -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -o minc2-create-test-images-2 -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= +[ 73%] Built target minc_types +make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend +[ 73%] Built target minc2-multires-test +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend +[ 74%] Linking C executable minc_conversion +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_conversion.dir/link.txt --verbose=1 +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' Scanning dependencies of target icv_fillvalue make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build -[ 75%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -o minc2-multires-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_tst.dir/minc.c.o -c /build/libminc-2.4.03/testdir/minc.c -[ 75%] Building C object testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -c /build/libminc-2.4.03/testdir/icv_fillvalue.c +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +Scanning dependencies of target test_arg_parse +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build +Scanning dependencies of target minc2-convert-test +[ 74%] Built target minc2-vector_dimension-test Scanning dependencies of target verify_xfm make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build +make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 75%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/verify_xfm.c -[ 76%] Linking C executable icv_dim1 -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 76%] Built target minc2-multires-test -make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= -[ 77%] Linking C executable icv_dim -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 -[ 77%] Linking C executable icv_fillvalue -[ 78%] Linking C executable minc_tst -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 78%] Built target minc2-create-test-images-2 -[ 79%] Linking C executable minc2-read-metadata -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1 -make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend -Scanning dependencies of target test_arg_parse -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 80%] Linking C executable verify_xfm -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -o minc2-read-metadata -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1 -Scanning dependencies of target minc2-convert-test -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-i686-linux-gnu /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build +[ 74%] Building C object testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -c /build/libminc-2.4.03/testdir/icv_fillvalue.c +Scanning dependencies of target minc2-create-test-images +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 81%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /build/libminc-2.4.03/testdir/test_arg_parse.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 82%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o +[ 75%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o +[ 76%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /build/libminc-2.4.03/testdir/test_arg_parse.c +[ 76%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /build/libminc-2.4.03/testdir/minc2-convert-test.c -[ 82%] Built target icv_dim1 -make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/verify_xfm.c +[ 76%] Built target icv_range +make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= -Scanning dependencies of target minc2-create-test-images +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= +Scanning dependencies of target multidim_test make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build +make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build +[ 76%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images.c make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 76%] Built target minc2-create-test-images-2 +make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +Scanning dependencies of target minc2-hyper-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 76%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /build/libminc-2.4.03/testdir/multidim_test.c +make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 76%] Built target minc2-leak-test +make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= +[ 76%] Built target minc_long_attr +make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend +Scanning dependencies of target test_xfm +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 77%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test.c /build/libminc-2.4.03/testdir/minc2-convert-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-convert-test.c:97:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[0] = i; @@ -4311,30 +4351,6 @@ /build/libminc-2.4.03/testdir/minc2-convert-test.c:103:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] voxel[2] = coords[2]; ^~~~~~ -[ 82%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images.c -[ 82%] Linking C executable test_arg_parse -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 82%] Built target minc2-read-metadata -make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend -[ 83%] Linking C executable volume_test -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= -[ 83%] Built target icv_dim -make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 83%] Built target minc_tst -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= /build/libminc-2.4.03/testdir/minc2-create-test-images.c: In function 'create_3D_image': /build/libminc-2.4.03/testdir/minc2-create-test-images.c:137:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] start[0] = i; @@ -4343,55 +4359,44 @@ /build/libminc-2.4.03/testdir/minc2-create-test-images.c:210:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] start[0] = i; ^ +Scanning dependencies of target minc2-datatype-test /build/libminc-2.4.03/testdir/minc2-create-test-images.c:212:18: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] start[1] = j; ^ -[ 83%] Built target verify_xfm -make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend -Scanning dependencies of target multidim_test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build -[ 83%] Built target icv_fillvalue -make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= -Scanning dependencies of target minc2-hyper-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -Scanning dependencies of target test_xfm -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build -[ 83%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o -Scanning dependencies of target minc2-datatype-test -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /build/libminc-2.4.03/testdir/multidim_test.c +[ 78%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build -[ 84%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test.c +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/test-xfm.c make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' Scanning dependencies of target minc2-large-attribute make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 85%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/test-xfm.c -[ 85%] Linking C executable minc2-convert-test -[ 85%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 78%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o +[ 78%] Linking C executable test_arg_parse cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /build/libminc-2.4.03/testdir/minc2-datatype-test.c -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 -[ 86%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 +[ 79%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o +[ 80%] Linking C executable minc_tst cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /build/libminc-2.4.03/testdir/minc2-large-attribute.c +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 +[ 81%] Linking C executable icv_dim +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 +[ 81%] Built target icv_vec +make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -o minc2-convert-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 82%] Linking C executable volume_test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-hyper-test.c: In function 'create_and_test_image': /build/libminc-2.4.03/testdir/minc2-hyper-test.c:89:26: warning: conversion to 'short unsigned int' from 'short int' may change the sign of the result [-Wsign-conversion] stmp2[i][j][k] = (short)((i*XP)+(j*YP)+(k*ZP)); ^ +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-hyper-test.c:261:20: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] start[0] = i; ^ @@ -4414,6 +4419,8 @@ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:458:31: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion] short t = stmp2[i][j][k]; ^~~~~ +[ 82%] Built target minc_conversion +make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend /build/libminc-2.4.03/testdir/minc2-hyper-test.c: In function 'test3': /build/libminc-2.4.03/testdir/minc2-hyper-test.c:814:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] start[0] = i; @@ -4424,10 +4431,15 @@ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:816:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] start[2] = k; ^ -[ 86%] Built target test_arg_parse -make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +Scanning dependencies of target minc2-record-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 83%] Linking C executable minc2-read-metadata +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1 /build/libminc-2.4.03/testdir/minc2-large-attribute.c: In function 'create_3D_image': /build/libminc-2.4.03/testdir/minc2-large-attribute.c:84:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] start[0] = i; @@ -4441,25 +4453,18 @@ /build/libminc-2.4.03/testdir/minc2-large-attribute.c:94:55: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] miset_attr_values(hvol,MI_TYPE_STRING,"test","test",attribute_size,attribute); ^~~~~~~~~~~~~~ -[ 87%] Linking C executable minc2-datatype-test -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 -[ 88%] Linking C executable minc2-create-test-images -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 -Scanning dependencies of target minc2-record-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -o minc2-datatype-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -o minc2-create-test-images -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 89%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o +Scanning dependencies of target minc2-full-test +[ 84%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /build/libminc-2.4.03/testdir/minc2-record-test.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 89%] Built target volume_test -make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= -[ 89%] Linking C executable minc2-large-attribute +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -o minc2-read-metadata -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 84%] Linking C executable icv_fillvalue +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1 +[ 84%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /build/libminc-2.4.03/testdir/minc2-full-test.c +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-record-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-record-test.c:85:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[0] = i; @@ -4479,41 +4484,11 @@ /build/libminc-2.4.03/testdir/minc2-record-test.c:107:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[2] = k; ^ -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 -[ 89%] Linking C executable test_xfm -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 -Scanning dependencies of target minc2-full-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 89%] Built target minc2-convert-test -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -o minc2-large-attribute -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -o test_xfm -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-i686-linux-gnu /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= -[ 89%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /build/libminc-2.4.03/testdir/minc2-full-test.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -Scanning dependencies of target minc2-grpattr-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build -[ 89%] Linking C executable minc2-record-test -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 89%] Built target minc2-datatype-test -make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= -[ 89%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /build/libminc-2.4.03/testdir/minc2-grpattr-test.c -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -o minc2-record-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -Scanning dependencies of target minc2-label-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build -[ 89%] Built target minc2-create-test-images -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 85%] Linking C executable minc2-datatype-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -o minc2-datatype-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 86%] Linking C executable verify_xfm +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1 /build/libminc-2.4.03/testdir/minc2-full-test.c: In function 'test1': /build/libminc-2.4.03/testdir/minc2-full-test.c:111:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[0] = i; @@ -4549,51 +4524,85 @@ /build/libminc-2.4.03/testdir/minc2-full-test.c:251:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[2] = k; ^ +[ 87%] Linking C executable minc2-create-test-images +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 +[ 87%] Linking C executable minc2-large-attribute +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-i686-linux-gnu /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -o minc2-create-test-images -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -o minc2-large-attribute -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 87%] Built target test_arg_parse +make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 87%] Linking C executable minc2-convert-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 +[ 88%] Linking C executable mincapi +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 +[ 88%] Built target volume_test +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -o minc2-convert-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 88%] Built target minc_tst +make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend +[ 88%] Built target icv_dim make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= +Scanning dependencies of target minc2-grpattr-test make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 90%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /build/libminc-2.4.03/testdir/minc2-label-test.c -[ 90%] Built target minc2-large-attribute make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend -Scanning dependencies of target create_grid_xfm make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build +make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -/build/libminc-2.4.03/testdir/minc2-label-test.c: In function 'create_label_image': -/build/libminc-2.4.03/testdir/minc2-label-test.c:110:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[0] = i; - ^ -/build/libminc-2.4.03/testdir/minc2-label-test.c:111:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[1] = j; - ^ -/build/libminc-2.4.03/testdir/minc2-label-test.c:112:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[2] = k; - ^ -[ 91%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /build/libminc-2.4.03/testdir/create_grid_xfm.c +[ 88%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /build/libminc-2.4.03/testdir/minc2-grpattr-test.c +[ 88%] Linking C executable test_xfm +Scanning dependencies of target minc2-label-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' Scanning dependencies of target minc2-slice-test +make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build +Scanning dependencies of target create_grid_xfm make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 92%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /build/libminc-2.4.03/testdir/minc2-slice-test.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 92%] Linking C executable minc2-hyper-test -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 -[ 92%] Built target minc2-record-test +make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 88%] Linking C executable minc2-record-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -o test_xfm -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-i686-linux-gnu /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +[ 88%] Built target minc2-read-metadata make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend +[ 90%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o +[ 90%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /build/libminc-2.4.03/testdir/minc2-label-test.c +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /build/libminc-2.4.03/testdir/minc2-slice-test.c make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= -[ 93%] Linking C executable minc2-full-test -[ 93%] Built target test_xfm +[ 91%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /build/libminc-2.4.03/testdir/create_grid_xfm.c +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -o minc2-record-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 91%] Built target icv_fillvalue make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -o minc2-hyper-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +Scanning dependencies of target minc2-valid-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 91%] Built target minc2-datatype-test /build/libminc-2.4.03/testdir/minc2-slice-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-slice-test.c:29:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[0] = i; /*Z*/ @@ -4604,40 +4613,42 @@ /build/libminc-2.4.03/testdir/minc2-slice-test.c:31:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[2] = rand()%CY; /*Y*/ ^~~~ -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -o minc2-full-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -Scanning dependencies of target minc2-valid-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' Scanning dependencies of target minc2-read-rgb make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 93%] Linking C executable create_grid_xfm +/build/libminc-2.4.03/testdir/minc2-label-test.c: In function 'create_label_image': +/build/libminc-2.4.03/testdir/minc2-label-test.c:110:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[0] = i; + ^ +/build/libminc-2.4.03/testdir/minc2-label-test.c:111:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[1] = j; + ^ make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 +/build/libminc-2.4.03/testdir/minc2-label-test.c:112:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[2] = k; + ^ make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 93%] Linking C executable minc2-slice-test -[ 94%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o +[ 92%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -c /build/libminc-2.4.03/testdir/minc2-valid-test.c -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 -[ 94%] Linking C executable minc2-grpattr-test -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-i686-linux-gnu /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +[ 93%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_simple_rw.cpp +[ 94%] Linking C executable minc2-full-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 [ 94%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -c /build/libminc-2.4.03/testdir/minc2-read-rgb.c -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -o minc2-slice-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 94%] Linking C executable minc2-label-test -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -o minc2-grpattr-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 94%] Linking C executable multidim_test -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/multidim_test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -o minc2-label-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 94%] Built target minc2-hyper-test -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/multidim_test.dir/multidim_test.c.o -o multidim_test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 94%] Built target minc2-create-test-images +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -o minc2-full-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 94%] Built target verify_xfm +[ 94%] Built target minc2-large-attribute +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 94%] Built target mincapi +[ 94%] Linking C executable minc2-slice-test +[ 94%] Built target minc2-convert-test /build/libminc-2.4.03/testdir/minc2-read-rgb.c: In function 'calculate_mean_f': +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 /build/libminc-2.4.03/testdir/minc2-read-rgb.c:23:13: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] return avg/length; ^ @@ -4722,25 +4733,48 @@ /build/libminc-2.4.03/testdir/minc2-read-rgb.c:475:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] d_full=malloc(sizeof(double)*my_sizes[0]*my_sizes[1]*my_sizes[2]); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -[ 94%] Built target minc2-full-test +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -o minc2-slice-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 94%] Linking C executable create_grid_xfm +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 94%] Built target test_xfm +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-i686-linux-gnu /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +[ 94%] Built target minc2-record-test +[ 94%] Linking C executable minc2-valid-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -o minc2-valid-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 94%] Built target minc2-full-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 94%] Linking C executable minc2-valid-test -cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 [ 94%] Built target minc2-slice-test +[ 94%] Linking C executable minc2-grpattr-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 [ 94%] Built target create_grid_xfm -[ 94%] Built target multidim_test -[ 94%] Built target minc2-label-test -[ 94%] Built target minc2-grpattr-test -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -o minc2-valid-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 94%] Linking C executable minc2-label-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -o minc2-grpattr-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -o minc2-label-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' [ 94%] Built target minc2-valid-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 94%] Built target minc2-grpattr-test +[ 94%] Built target minc2-label-test +[ 94%] Linking C executable minc2-hyper-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -o minc2-hyper-test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 94%] Linking C executable multidim_test +cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/multidim_test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/multidim_test.dir/multidim_test.c.o -o multidim_test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' [ 94%] Linking C executable minc2-read-rgb cd /build/libminc-2.4.03/obj-i686-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -o minc2-read-rgb -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 94%] Built target minc2-hyper-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 94%] Built target multidim_test make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' [ 94%] Built target minc2-read-rgb [ 94%] Linking CXX shared library libminc_io.so @@ -4752,71 +4786,57 @@ make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend +make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend +make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= -make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= -make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color= +Scanning dependencies of target volume_msq_dist Scanning dependencies of target trilinear_resample -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +Scanning dependencies of target ezminc_rw_test Scanning dependencies of target create_grid_file -Scanning dependencies of target volume_msq_dist make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build -Scanning dependencies of target ezminc_rw_test2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build -Scanning dependencies of target volume_avg +make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build +make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build +make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -Scanning dependencies of target ezminc_rw_test +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +Scanning dependencies of target volume_avg +Scanning dependencies of target ezminc_rw_test2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build +make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 95%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -[ 95%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp +[ 95%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp -[ 95%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o -[ 95%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -[ 96%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o +[ 96%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o +[ 97%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -c /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp -cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp +[ 97%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_avg.dir/volume_avg.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp -[ 97%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -c /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - def[0]=amp*sin(M_PI*pos[0]/100.0); - ~~~^~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - def[1]=amp*sin(2*M_PI*pos[1]/100.0); - ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - def[2]=amp*cos(3*M_PI*pos[2]/100.0); - ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion from 'size_t' {aka 'unsigned int'} to 'float' may change value [-Wconversion] - vol(x,y,z)=x+y+z; - ~~~^~ +[ 97%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o +cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-i686-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp: In function 'int main(int, char**)': /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] old_step[i-1]=new_info[rdr.map_space(i)].step; @@ -4842,10 +4862,6 @@ /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:115:53: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] output_vol.set(x,y,z,input_vol.interpolate(cc[0],cc[1],cc[2])); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/examples/volume_avg.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:128:47: warning: conversion from 'int' to 'float' may change value [-Wconversion] - _sd.c_buf()[i]=sqrt(_sd.c_buf()[i]/(argc-1) - _avg.c_buf()[i]*_avg.c_buf()[i] ); - ~~~~~^~~ In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:18: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'double minc::simple_volume::interpolate(float, float, float) const [with T = float]': @@ -4882,6 +4898,10 @@ ^ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] short_attr[i]=i; +/build/libminc-2.4.03/ezminc/examples/volume_avg.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:128:47: warning: conversion from 'int' to 'float' may change value [-Wconversion] + _sd.c_buf()[i]=sqrt(_sd.c_buf()[i]/(argc-1) - _avg.c_buf()[i]*_avg.c_buf()[i] ); + ~~~~~^~~ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:187:61: required from here /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, float>::value_type' {aka 'float'} may change value [-Wfloat-conversion] @@ -4892,31 +4912,45 @@ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] +/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion from 'size_t' {aka 'unsigned int'} to 'float' may change value [-Wconversion] + vol(x,y,z)=x+y+z; + ~~~^~ +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + def[0]=amp*sin(M_PI*pos[0]/100.0); + ~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + def[1]=amp*sin(2*M_PI*pos[1]/100.0); + ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + def[2]=amp*cos(3*M_PI*pos[2]/100.0); + ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 98%] Linking CXX executable volume_msq_dist cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_msq_dist.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -o volume_msq_dist -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu/ezminc:/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf [ 99%] Linking CXX executable ezminc_rw_test2 cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test2.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -o ezminc_rw_test2 -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu/ezminc:/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' [ 99%] Built target volume_msq_dist -[ 99%] Linking CXX executable create_grid_file -cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 99%] Built target ezminc_rw_test2 [100%] Linking CXX executable volume_avg cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_avg.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu/ezminc:/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_avg.dir/volume_avg.cpp.o -o volume_avg -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu/ezminc:/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf +[100%] Linking CXX executable create_grid_file +cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1 [100%] Linking CXX executable trilinear_resample cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_avg.dir/volume_avg.cpp.o -o volume_avg -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu/ezminc:/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu/ezminc:/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu/ezminc:/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf -[100%] Built target ezminc_rw_test2 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' [100%] Built target volume_avg make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[100%] Built target trilinear_resample [100%] Built target create_grid_file +[100%] Built target trilinear_resample [100%] Linking CXX executable ezminc_rw_test cd /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -o ezminc_rw_test -Wl,-rpath,/build/libminc-2.4.03/obj-i686-linux-gnu/ezminc:/build/libminc-2.4.03/obj-i686-linux-gnu:/usr/lib/i386-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf @@ -4934,113 +4968,113 @@ /usr/bin/ctest --force-new-ctest-process -j1 Test project /build/libminc-2.4.03/obj-i686-linux-gnu Start 1: ezminc_rw_test - 1/52 Test #1: ezminc_rw_test ................... Passed 0.41 sec + 1/52 Test #1: ezminc_rw_test ................... Passed 0.02 sec Start 2: minc_types-1 - 2/52 Test #2: minc_types-1 ..................... Passed 1.23 sec + 2/52 Test #2: minc_types-1 ..................... Passed 0.05 sec Start 3: minc_types-2 - 3/52 Test #3: minc_types-2 ..................... Passed 1.29 sec + 3/52 Test #3: minc_types-2 ..................... Passed 0.13 sec Start 4: icv_dim1-1 - 4/52 Test #4: icv_dim1-1 ....................... Passed 0.07 sec + 4/52 Test #4: icv_dim1-1 ....................... Passed 0.01 sec Start 5: icv_dim1-2 - 5/52 Test #5: icv_dim1-2 ....................... Passed 0.06 sec + 5/52 Test #5: icv_dim1-2 ....................... Passed 0.01 sec Start 6: icv_dim-1 - 6/52 Test #6: icv_dim-1 ........................ Passed 0.08 sec + 6/52 Test #6: icv_dim-1 ........................ Passed 0.01 sec Start 7: icv_dim-2 - 7/52 Test #7: icv_dim-2 ........................ Passed 0.06 sec + 7/52 Test #7: icv_dim-2 ........................ Passed 0.01 sec Start 8: icv_fillvalue-1 - 8/52 Test #8: icv_fillvalue-1 .................. Passed 0.03 sec + 8/52 Test #8: icv_fillvalue-1 .................. Passed 0.01 sec Start 9: icv_fillvalue-2 - 9/52 Test #9: icv_fillvalue-2 .................. Passed 0.07 sec + 9/52 Test #9: icv_fillvalue-2 .................. Passed 0.01 sec Start 10: icv_range-1 -10/52 Test #10: icv_range-1 ...................... Passed 0.19 sec +10/52 Test #10: icv_range-1 ...................... Passed 0.03 sec Start 11: icv_range-2 -11/52 Test #11: icv_range-2 ...................... Passed 0.35 sec +11/52 Test #11: icv_range-2 ...................... Passed 0.08 sec Start 12: arg_parse -12/52 Test #12: arg_parse ........................ Passed 1.08 sec +12/52 Test #12: arg_parse ........................ Passed 0.13 sec Start 13: icv -13/52 Test #13: icv .............................. Passed 0.04 sec +13/52 Test #13: icv .............................. Passed 0.01 sec Start 14: icv_vec -14/52 Test #14: icv_vec .......................... Passed 0.09 sec +14/52 Test #14: icv_vec .......................... Passed 0.01 sec Start 15: minc -15/52 Test #15: minc ............................. Passed 0.06 sec +15/52 Test #15: minc ............................. Passed 0.01 sec Start 16: mincapi -16/52 Test #16: mincapi .......................... Passed 0.19 sec +16/52 Test #16: mincapi .......................... Passed 0.04 sec Start 17: test_mconv -17/52 Test #17: test_mconv ....................... Passed 0.05 sec +17/52 Test #17: test_mconv ....................... Passed 0.01 sec Start 18: minc_long_attr_10k -18/52 Test #18: minc_long_attr_10k ............... Passed 0.23 sec +18/52 Test #18: minc_long_attr_10k ............... Passed 0.04 sec Start 19: minc_long_attr_100k -19/52 Test #19: minc_long_attr_100k .............. Passed 0.15 sec +19/52 Test #19: minc_long_attr_100k .............. Passed 0.04 sec Start 20: minc_long_attr_1m -20/52 Test #20: minc_long_attr_1m ................ Passed 0.29 sec +20/52 Test #20: minc_long_attr_1m ................ Passed 0.05 sec Start 21: minc_conversion -21/52 Test #21: minc_conversion .................. Passed 0.42 sec +21/52 Test #21: minc_conversion .................. Passed 0.05 sec Start 22: volume_test-1 -22/52 Test #22: volume_test-1 .................... Passed 3.67 sec +22/52 Test #22: volume_test-1 .................... Passed 1.15 sec Start 23: volume_multidim_test -23/52 Test #23: volume_multidim_test ............. Passed 0.96 sec +23/52 Test #23: volume_multidim_test ............. Passed 0.41 sec Start 24: test_xfm_1 -24/52 Test #24: test_xfm_1 ....................... Passed 0.10 sec +24/52 Test #24: test_xfm_1 ....................... Passed 0.01 sec Start 25: test_xfm_2 -25/52 Test #25: test_xfm_2 ....................... Passed 0.05 sec +25/52 Test #25: test_xfm_2 ....................... Passed 0.01 sec Start 26: test_xfm_3 -26/52 Test #26: test_xfm_3 ....................... Passed 0.30 sec +26/52 Test #26: test_xfm_3 ....................... Passed 0.03 sec Start 27: copy_xfm -27/52 Test #27: copy_xfm ......................... Passed 0.07 sec +27/52 Test #27: copy_xfm ......................... Passed 0.02 sec Start 28: verify_xfm_1 -28/52 Test #28: verify_xfm_1 ..................... Passed 0.08 sec +28/52 Test #28: verify_xfm_1 ..................... Passed 0.01 sec Start 29: verify_xfm_float -29/52 Test #29: verify_xfm_float ................. Passed 0.07 sec +29/52 Test #29: verify_xfm_float ................. Passed 0.01 sec Start 30: verify_xfm_short -30/52 Test #30: verify_xfm_short ................. Passed 0.09 sec +30/52 Test #30: verify_xfm_short ................. Passed 0.01 sec Start 31: verify_xfm_byte -31/52 Test #31: verify_xfm_byte .................. Passed 0.06 sec +31/52 Test #31: verify_xfm_byte .................. Passed 0.01 sec Start 32: verify_xfm_2 -32/52 Test #32: verify_xfm_2 ..................... Passed 0.05 sec +32/52 Test #32: verify_xfm_2 ..................... Passed 0.01 sec Start 33: test_arg_parse -33/52 Test #33: test_arg_parse ................... Passed 0.02 sec +33/52 Test #33: test_arg_parse ................... Passed 0.01 sec Start 34: minc2-convert-test -34/52 Test #34: minc2-convert-test ............... Passed 10.94 sec +34/52 Test #34: minc2-convert-test ............... Passed 3.17 sec Start 35: minc2-create-test-images -35/52 Test #35: minc2-create-test-images ......... Passed 3.54 sec +35/52 Test #35: minc2-create-test-images ......... Passed 0.06 sec Start 36: minc2-create-test-images-2 -36/52 Test #36: minc2-create-test-images-2 ....... Passed 2.31 sec +36/52 Test #36: minc2-create-test-images-2 ....... Passed 0.07 sec Start 37: minc2-large-attribute-10k -37/52 Test #37: minc2-large-attribute-10k ........ Passed 0.12 sec +37/52 Test #37: minc2-large-attribute-10k ........ Passed 0.01 sec Start 38: minc2-large-attribute-100k -38/52 Test #38: minc2-large-attribute-100k ....... Passed 0.07 sec +38/52 Test #38: minc2-large-attribute-100k ....... Passed 0.01 sec Start 39: minc2-large-attribute-1m -39/52 Test #39: minc2-large-attribute-1m ......... Passed 0.16 sec +39/52 Test #39: minc2-large-attribute-1m ......... Passed 0.02 sec Start 40: minc2-datatype-test -40/52 Test #40: minc2-datatype-test .............. Passed 5.53 sec +40/52 Test #40: minc2-datatype-test .............. Passed 1.52 sec Start 41: minc2-full-test -41/52 Test #41: minc2-full-test .................. Passed 1.86 sec +41/52 Test #41: minc2-full-test .................. Passed 0.42 sec Start 42: minc2-grpattr-test -42/52 Test #42: minc2-grpattr-test ............... Passed 0.06 sec +42/52 Test #42: minc2-grpattr-test ............... Passed 0.01 sec Start 43: minc2-hyper-test-2 -43/52 Test #43: minc2-hyper-test-2 ............... Passed 1.39 sec +43/52 Test #43: minc2-hyper-test-2 ............... Passed 0.07 sec Start 44: minc2-hyper-test -44/52 Test #44: minc2-hyper-test ................. Passed 0.08 sec +44/52 Test #44: minc2-hyper-test ................. Passed 0.02 sec Start 45: minc2-label-test -45/52 Test #45: minc2-label-test ................. Passed 0.07 sec +45/52 Test #45: minc2-label-test ................. Passed 0.01 sec Start 46: minc2-multires-test -46/52 Test #46: minc2-multires-test .............. Passed 7.54 sec +46/52 Test #46: minc2-multires-test .............. Passed 2.18 sec Start 47: minc2-record-test -47/52 Test #47: minc2-record-test ................ Passed 0.20 sec +47/52 Test #47: minc2-record-test ................ Passed 0.02 sec Start 48: minc2-slice-test -48/52 Test #48: minc2-slice-test ................. Passed 0.10 sec +48/52 Test #48: minc2-slice-test ................. Passed 0.01 sec Start 49: minc2-valid-test -49/52 Test #49: minc2-valid-test ................. Passed 0.23 sec +49/52 Test #49: minc2-valid-test ................. Passed 0.01 sec Start 50: minc2-vector_dimension-test -50/52 Test #50: minc2-vector_dimension-test ...... Passed 3.77 sec +50/52 Test #50: minc2-vector_dimension-test ...... Passed 0.64 sec Start 51: minc2-volprops-test -51/52 Test #51: minc2-volprops-test .............. Passed 0.04 sec +51/52 Test #51: minc2-volprops-test .............. Passed 0.01 sec Start 52: minc2-leak-test -52/52 Test #52: minc2-leak-test .................. Passed 21.40 sec +52/52 Test #52: minc2-leak-test .................. Passed 8.92 sec 100% tests passed, 0 tests failed out of 52 -Total Test time (real) = 73.41 sec +Total Test time (real) = 19.61 sec make[2]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[1]: Leaving directory '/build/libminc-2.4.03' create-stamp debian/debhelper-build-stamp @@ -5049,7 +5083,7 @@ dh_testroot dh_prep dh_auto_install - cd obj-i686-linux-gnu && make -j10 install DESTDIR=/build/libminc-2.4.03/debian/tmp AM_UPDATE_INFO_DIR=no + cd obj-i686-linux-gnu && make -j18 install DESTDIR=/build/libminc-2.4.03/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' /usr/bin/cmake -S/build/libminc-2.4.03 -B/build/libminc-2.4.03/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/libminc-2.4.03/obj-i686-linux-gnu/CMakeFiles /build/libminc-2.4.03/obj-i686-linux-gnu/CMakeFiles/progress.marks @@ -5071,58 +5105,98 @@ make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/minc2_static.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 30%] Built target minc2 +[ 44%] Built target minc2 +[ 60%] Built target minc2_static make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/depend make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/depend -[ 60%] Built target minc2_static make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend +make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend +make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend +make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend +make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend +make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build +make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build +make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build +make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build +make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build +make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build +make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build +make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/icv.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' @@ -5130,103 +5204,40 @@ make[3]: Nothing to be done for 'testdir/CMakeFiles/mincapi.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_range.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-volprops-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_long_attr.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_range.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-volprops-test.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_conversion.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-leak-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 61%] Built target icv -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend -[ 62%] Built target mincapi -make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend -[ 63%] Built target icv_range -make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend -[ 64%] Built target minc_long_attr -make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-vector_dimension-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'ezminc/CMakeFiles/minc_io.dir/build'. -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 65%] Built target minc2-volprops-test -make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend -[ 66%] Built target minc2-leak-test -make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_conversion.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_long_attr.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 67%] Built target minc2-vector_dimension-test -make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend -[ 68%] Built target minc_io -make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color= -[ 69%] Built target minc_conversion -make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/copy_xfm.dir/build'. +make[3]: Nothing to be done for 'ezminc/CMakeFiles/minc_io.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 69%] Built target copy_xfm -make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-hyper-test-2.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/test_mconv.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_dim1.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_types.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_vec.dir/build'. -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-hyper-test-2.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/test_mconv.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_dim1.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_vec.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-multires-test.dir/build'. @@ -5235,248 +5246,271 @@ make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-create-test-images-2.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_dim.dir/build'. -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-read-metadata.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/copy_xfm.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 61%] Built target mincapi +[ 62%] Built target icv make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/volume_test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 70%] Built target test_mconv +[ 64%] Built target minc2-volprops-test +[ 64%] Built target icv_range +[ 65%] Built target minc2-leak-test +[ 66%] Built target minc2-vector_dimension-test +[ 67%] Built target minc_conversion +[ 68%] Built target minc_io +[ 69%] Built target minc_long_attr +make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color= +[ 70%] Built target minc2-hyper-test-2 +[ 71%] Built target test_mconv +[ 72%] Built target minc_types +[ 73%] Built target icv_dim1 +[ 74%] Built target minc2-create-test-images-2 +make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend +[ 75%] Built target icv_vec +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend -[ 71%] Built target icv_dim1 make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend -[ 72%] Built target minc_types make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend -[ 73%] Built target minc2-hyper-test-2 +[ 76%] Built target minc2-multires-test +[ 76%] Built target copy_xfm make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend -[ 74%] Built target minc2-create-test-images-2 +[ 77%] Built target volume_test make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend -[ 75%] Built target icv_vec make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend -[ 76%] Built target minc2-read-metadata make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend -[ 77%] Built target volume_test -[ 78%] Built target minc2-multires-test -[ 79%] Built target icv_dim -make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color= cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend +make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend +make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend +make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend +make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build +make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build +make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build +make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build +make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build +make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_dim.dir/build'. +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_tst.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_fillvalue.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 80%] Built target minc_tst -make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend -[ 80%] Built target icv_fillvalue -make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/test_arg_parse.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 81%] Built target test_arg_parse -make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-create-test-images.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-read-metadata.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-convert-test.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-create-test-images.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-datatype-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-hyper-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 82%] Built target minc2-create-test-images -make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend -[ 83%] Built target minc2-convert-test -make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= -[ 84%] Built target minc2-datatype-test -make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend -[ 85%] Built target minc2-hyper-test -make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-convert-test.dir/build'. +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-large-attribute.dir/build'. +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 78%] Built target icv_dim make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-record-test.dir/build'. +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/verify_xfm.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-label-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/multidim_test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 79%] Built target minc_tst make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/test_xfm.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/verify_xfm.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 86%] Built target verify_xfm make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend -[ 86%] Built target multidim_test +[ 80%] Built target test_arg_parse make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend -[ 87%] Built target test_xfm -make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-large-attribute.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-grpattr-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-record-test.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-full-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 88%] Built target minc2-large-attribute +[ 80%] Built target icv_fillvalue +[ 82%] Built target minc2-datatype-test +[ 82%] Built target minc2-read-metadata +make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend -[ 89%] Built target minc2-record-test make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend +[ 83%] Built target minc2-create-test-images +make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend +[ 84%] Built target minc2-convert-test +[ 85%] Built target minc2-hyper-test +[ 86%] Built target minc2-large-attribute make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-full-test.dir/build'. -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-grpattr-test.dir/build'. -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= +make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend +make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend +[ 87%] Built target minc2-record-test +[ 88%] Built target minc2-label-test make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/testdir /build/libminc-2.4.03/obj-i686-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-label-test.dir/build'. -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 90%] Built target minc2-full-test -make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-slice-test.dir/build'. -make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 90%] Built target minc2-grpattr-test -make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend -[ 91%] Built target minc2-label-test -make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend -[ 92%] Built target minc2-slice-test +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= +[ 88%] Built target multidim_test make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color= +[ 89%] Built target verify_xfm +[ 89%] Built target minc2-grpattr-test +[ 90%] Built target minc2-full-test make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -cd /build/libminc-2.4.03/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-i686-linux-gnu /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-i686-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'testdir/CMakeFiles/test_xfm.dir/build'. +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-valid-test.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/create_grid_xfm.dir/build'. +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-read-rgb.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 93%] Built target minc2-valid-test -[ 93%] Built target minc2-read-rgb -make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/create_grid_xfm.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build -[ 94%] Built target create_grid_xfm +make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build +[ 91%] Built target test_xfm +make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/trilinear_resample.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 92%] Built target create_grid_xfm make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build -[ 95%] Built target trilinear_resample +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-slice-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-valid-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build -make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/volume_msq_dist.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/create_grid_file.dir/build'. +make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/volume_avg.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' +[ 92%] Built target minc2-read-rgb make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build'. +make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/create_grid_file.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/volume_avg.dir/build'. +make[3]: Nothing to be done for 'ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-i686-linux-gnu' make[3]: Nothing to be done for 'ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' -[ 96%] Built target volume_msq_dist -[ 97%] Built target volume_avg -[ 98%] Built target create_grid_file -[ 99%] Built target ezminc_rw_test2 +[ 93%] Built target minc2-slice-test +[ 94%] Built target trilinear_resample +[ 95%] Built target minc2-valid-test +[ 96%] Built target create_grid_file +[ 97%] Built target volume_msq_dist +[ 98%] Built target ezminc_rw_test2 +[ 99%] Built target volume_avg [100%] Built target ezminc_rw_test make[2]: Leaving directory '/build/libminc-2.4.03/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/libminc-2.4.03/obj-i686-linux-gnu/CMakeFiles 0 @@ -5549,28 +5583,30 @@ dh_strip dh_makeshlibs dh_shlibdeps -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc2.so.5.2.0 debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc_io.so.5.2.0 were not linked against libdl.so.2 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc2.so.5.2.0 debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc_io.so.5.2.0 were not linked against libsz.so.2 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc2.so.5.2.0 debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc_io.so.5.2.0 were not linked against libz.so.1 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc_io.so.5.2.0 debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc2.so.5.2.0 were not linked against libdl.so.2 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc_io.so.5.2.0 debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc2.so.5.2.0 were not linked against libsz.so.2 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc_io.so.5.2.0 debian/libminc2-5.2.0/usr/lib/i386-linux-gnu/libminc2.so.5.2.0 were not linked against libz.so.1 (they use none of the library's symbols) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb +dpkg-deb: building package 'libminc2-5.2.0' in '../libminc2-5.2.0_2.4.03-2_i386.deb'. dpkg-deb: building package 'libminc2-5.2.0-dbgsym' in '../libminc2-5.2.0-dbgsym_2.4.03-2_i386.deb'. dpkg-deb: building package 'libminc-dev' in '../libminc-dev_2.4.03-2_i386.deb'. -dpkg-deb: building package 'libminc2-5.2.0' in '../libminc2-5.2.0_2.4.03-2_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libminc_2.4.03-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration +I: user script /srv/workspace/pbuilder/63810/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/63810/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/25646 and its subdirectories -I: Current time: Sun Jun 21 20:02:54 -12 2020 -I: pbuilder-time-stamp: 1592812974 +I: removing directory /srv/workspace/pbuilder/63810 and its subdirectories +I: Current time: Mon Jul 26 04:26:49 +14 2021 +I: pbuilder-time-stamp: 1627223209