Diff of the two buildlogs: -- --- b1/build.log 2020-09-24 13:20:41.700806617 +0000 +++ b2/build.log 2020-09-24 13:23:28.489665247 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Sep 24 01:14:56 -12 2020 -I: pbuilder-time-stamp: 1600953296 +I: Current time: Thu Oct 28 09:43:40 +14 2021 +I: pbuilder-time-stamp: 1635363820 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -18,7 +18,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Sat May 5 21:00:32 2018 -12 +gpgv: Signature made Sun May 6 23:00:32 2018 +14 gpgv: using RSA key D9B453B799B8830D945E6A0A5BF54E5E12B900BB gpgv: issuer "picca@debian.org" gpgv: Can't check signature: No public key @@ -30,138 +30,172 @@ dpkg-source: info: applying 0001-use-mmdb2-instead-of-mmdb-in-libccp4f.pc.in.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/5036/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/37348/tmp/hooks/D01_modify_environment starting +debug: Running on profitbricks-build6-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/37348/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/37348/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.0.3(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=18' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='c7c479b872e34e7ca450631be295e747' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='5036' - PS1='# ' - PS2='> ' + INVOCATION_ID=eaca5dff638841c597d4bb4669b8e549 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=37348 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.TDvTSEORf4/pbuilderrc_LQKy --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.TDvTSEORf4/b1 --logfile b1/build.log libccp4_6.5.1-1.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.TDvTSEORf4/pbuilderrc_TjaJ --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.TDvTSEORf4/b2 --logfile b2/build.log libccp4_6.5.1-1.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux profitbricks-build12-i386 4.19.0-10-686-pae #1 SMP Debian 4.19.132-1 (2020-07-24) i686 GNU/Linux + Linux i-capture-the-hostname 4.19.0-10-amd64 #1 SMP Debian 4.19.132-1 (2020-07-24) x86_64 GNU/Linux I: ls -l /bin total 5476 - -rwxr-xr-x 1 root root 1302248 Apr 17 2019 bash - -rwxr-xr-x 3 root root 38280 Jul 10 2019 bunzip2 - -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzcat - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep - -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzip2 - -rwxr-xr-x 1 root root 17768 Jul 10 2019 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore - -rwxr-xr-x 1 root root 38692 Feb 28 2019 cat - -rwxr-xr-x 1 root root 75588 Feb 28 2019 chgrp - -rwxr-xr-x 1 root root 63268 Feb 28 2019 chmod - -rwxr-xr-x 1 root root 75588 Feb 28 2019 chown - -rwxr-xr-x 1 root root 153732 Feb 28 2019 cp - -rwxr-xr-x 1 root root 132820 Jan 17 2019 dash - -rwxr-xr-x 1 root root 120676 Feb 28 2019 date - -rwxr-xr-x 1 root root 92040 Feb 28 2019 dd - -rwxr-xr-x 1 root root 100620 Feb 28 2019 df - -rwxr-xr-x 1 root root 149736 Feb 28 2019 dir - -rwxr-xr-x 1 root root 79412 Jan 9 2019 dmesg - lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname - -rwxr-xr-x 1 root root 34532 Feb 28 2019 echo - -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep - -rwxr-xr-x 1 root root 34532 Feb 28 2019 false - -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep - -rwxr-xr-x 1 root root 67700 Jan 9 2019 findmnt - -rwsr-xr-x 1 root root 30112 Apr 22 07:38 fusermount - -rwxr-xr-x 1 root root 206392 Jan 7 2019 grep - -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip - -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe - -rwxr-xr-x 1 root root 100952 Jan 5 2019 gzip - -rwxr-xr-x 1 root root 21916 Sep 26 2018 hostname - -rwxr-xr-x 1 root root 79752 Feb 28 2019 ln - -rwxr-xr-x 1 root root 55400 Jul 26 2018 login - -rwxr-xr-x 1 root root 149736 Feb 28 2019 ls - -rwxr-xr-x 1 root root 112032 Jan 9 2019 lsblk - -rwxr-xr-x 1 root root 87972 Feb 28 2019 mkdir - -rwxr-xr-x 1 root root 79748 Feb 28 2019 mknod - -rwxr-xr-x 1 root root 46916 Feb 28 2019 mktemp - -rwxr-xr-x 1 root root 42348 Jan 9 2019 more - -rwsr-xr-x 1 root root 50592 Jan 9 2019 mount - -rwxr-xr-x 1 root root 13724 Jan 9 2019 mountpoint - -rwxr-xr-x 1 root root 157832 Feb 28 2019 mv - lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 38660 Feb 28 2019 pwd - lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash - -rwxr-xr-x 1 root root 46852 Feb 28 2019 readlink - -rwxr-xr-x 1 root root 75588 Feb 28 2019 rm - -rwxr-xr-x 1 root root 42756 Feb 28 2019 rmdir - -rwxr-xr-x 1 root root 22276 Jan 21 2019 run-parts - -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Sep 20 20:25 sh -> dash - -rwxr-xr-x 1 root root 34532 Feb 28 2019 sleep - -rwxr-xr-x 1 root root 79652 Feb 28 2019 stty - -rwsr-xr-x 1 root root 71072 Jan 9 2019 su - -rwxr-xr-x 1 root root 34564 Feb 28 2019 sync - -rwxr-xr-x 1 root root 504024 Apr 23 2019 tar - -rwxr-xr-x 1 root root 13860 Jan 21 2019 tempfile - -rwxr-xr-x 1 root root 104292 Feb 28 2019 touch - -rwxr-xr-x 1 root root 34532 Feb 28 2019 true - -rwxr-xr-x 1 root root 17768 Apr 22 07:38 ulockmgr_server - -rwsr-xr-x 1 root root 30108 Jan 9 2019 umount - -rwxr-xr-x 1 root root 34532 Feb 28 2019 uname - -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress - -rwxr-xr-x 1 root root 149736 Feb 28 2019 vdir - -rwxr-xr-x 1 root root 34208 Jan 9 2019 wdctl - -rwxr-xr-x 1 root root 946 Jan 21 2019 which - lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat - -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp - -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff - -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep - -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep - -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce - -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep - -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless - -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore - -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew -I: user script /srv/workspace/pbuilder/5036/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1302248 Apr 18 2019 bash + -rwxr-xr-x 3 root root 38280 Jul 11 2019 bunzip2 + -rwxr-xr-x 3 root root 38280 Jul 11 2019 bzcat + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep + -rwxr-xr-x 3 root root 38280 Jul 11 2019 bzip2 + -rwxr-xr-x 1 root root 17768 Jul 11 2019 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore + -rwxr-xr-x 1 root root 38692 Mar 1 2019 cat + -rwxr-xr-x 1 root root 75588 Mar 1 2019 chgrp + -rwxr-xr-x 1 root root 63268 Mar 1 2019 chmod + -rwxr-xr-x 1 root root 75588 Mar 1 2019 chown + -rwxr-xr-x 1 root root 153732 Mar 1 2019 cp + -rwxr-xr-x 1 root root 132820 Jan 18 2019 dash + -rwxr-xr-x 1 root root 120676 Mar 1 2019 date + -rwxr-xr-x 1 root root 92040 Mar 1 2019 dd + -rwxr-xr-x 1 root root 100620 Mar 1 2019 df + -rwxr-xr-x 1 root root 149736 Mar 1 2019 dir + -rwxr-xr-x 1 root root 79412 Jan 10 2019 dmesg + lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname + -rwxr-xr-x 1 root root 34532 Mar 1 2019 echo + -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep + -rwxr-xr-x 1 root root 34532 Mar 1 2019 false + -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep + -rwxr-xr-x 1 root root 67700 Jan 10 2019 findmnt + -rwsr-xr-x 1 root root 30112 Apr 23 2020 fusermount + -rwxr-xr-x 1 root root 206392 Jan 8 2019 grep + -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip + -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe + -rwxr-xr-x 1 root root 100952 Jan 6 2019 gzip + -rwxr-xr-x 1 root root 21916 Sep 27 2018 hostname + -rwxr-xr-x 1 root root 79752 Mar 1 2019 ln + -rwxr-xr-x 1 root root 55400 Jul 27 2018 login + -rwxr-xr-x 1 root root 149736 Mar 1 2019 ls + -rwxr-xr-x 1 root root 112032 Jan 10 2019 lsblk + -rwxr-xr-x 1 root root 87972 Mar 1 2019 mkdir + -rwxr-xr-x 1 root root 79748 Mar 1 2019 mknod + -rwxr-xr-x 1 root root 46916 Mar 1 2019 mktemp + -rwxr-xr-x 1 root root 42348 Jan 10 2019 more + -rwsr-xr-x 1 root root 50592 Jan 10 2019 mount + -rwxr-xr-x 1 root root 13724 Jan 10 2019 mountpoint + -rwxr-xr-x 1 root root 157832 Mar 1 2019 mv + lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 38660 Mar 1 2019 pwd + lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash + -rwxr-xr-x 1 root root 46852 Mar 1 2019 readlink + -rwxr-xr-x 1 root root 75588 Mar 1 2019 rm + -rwxr-xr-x 1 root root 42756 Mar 1 2019 rmdir + -rwxr-xr-x 1 root root 22276 Jan 22 2019 run-parts + -rwxr-xr-x 1 root root 125036 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Oct 28 09:43 sh -> bash + lrwxrwxrwx 1 root root 4 Oct 25 04:47 sh.distrib -> dash + -rwxr-xr-x 1 root root 34532 Mar 1 2019 sleep + -rwxr-xr-x 1 root root 79652 Mar 1 2019 stty + -rwsr-xr-x 1 root root 71072 Jan 10 2019 su + -rwxr-xr-x 1 root root 34564 Mar 1 2019 sync + -rwxr-xr-x 1 root root 504024 Apr 24 2019 tar + -rwxr-xr-x 1 root root 13860 Jan 22 2019 tempfile + -rwxr-xr-x 1 root root 104292 Mar 1 2019 touch + -rwxr-xr-x 1 root root 34532 Mar 1 2019 true + -rwxr-xr-x 1 root root 17768 Apr 23 2020 ulockmgr_server + -rwsr-xr-x 1 root root 30108 Jan 10 2019 umount + -rwxr-xr-x 1 root root 34532 Mar 1 2019 uname + -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress + -rwxr-xr-x 1 root root 149736 Mar 1 2019 vdir + -rwxr-xr-x 1 root root 34208 Jan 10 2019 wdctl + -rwxr-xr-x 1 root root 946 Jan 22 2019 which + lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat + -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp + -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff + -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep + -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep + -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce + -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep + -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless + -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore + -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew +I: user script /srv/workspace/pbuilder/37348/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -242,7 +276,7 @@ Get: 37 http://deb.debian.org/debian buster/main i386 gfortran i386 4:8.3.0-1 [1432 B] Get: 38 http://deb.debian.org/debian buster/main i386 libmmdb2-0 i386 2.0.5-1 [359 kB] Get: 39 http://deb.debian.org/debian buster/main i386 libmmdb2-dev i386 2.0.5-1 [91.9 kB] -Fetched 30.4 MB in 10s (2992 kB/s) +Fetched 30.4 MB in 1s (37.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19234 files and directories currently installed.) @@ -423,7 +457,7 @@ fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/libccp4-6.5.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b +I: Running cd /build/libccp4-6.5.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package libccp4 dpkg-buildpackage: info: source version 6.5.1-1 dpkg-buildpackage: info: source distribution unstable @@ -585,40 +619,51 @@ config.status: executing libtool commands make[1]: Leaving directory '/build/libccp4-6.5.1' dh_auto_build - make -j10 + make -j18 make[1]: Entering directory '/build/libccp4-6.5.1' m4 -D_gfort=1 fortran/unix.m4 > fortran/unix.f make all-am make[2]: Entering directory '/build/libccp4-6.5.1' -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/ccp4_array.lo ccp4/ccp4_array.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_data.lo ccp4/cmap_data.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmtzlib.lo ccp4/cmtzlib.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/ccp4_general.lo ccp4/ccp4_general.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_header.lo ccp4/cmap_header.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/csymlib.lo ccp4/csymlib.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/ccp4_parser.lo ccp4/ccp4_parser.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_labels.lo ccp4/cmap_labels.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cvecmat.lo ccp4/cvecmat.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/ccp4_program.lo ccp4/ccp4_program.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/csymlib.c -fPIC -DPIC -o ccp4/.libs/csymlib.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/ccp4_array.lo ccp4/ccp4_array.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat 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-Werror=format-security -c -o ccp4/ccp4_program.lo ccp4/ccp4_program.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_open.lo ccp4/cmap_open.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/library_err.lo ccp4/library_err.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/ccp4_unitcell.lo ccp4/ccp4_unitcell.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_skew.lo ccp4/cmap_skew.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/library_file.lo ccp4/library_file.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_accessor.lo ccp4/cmap_accessor.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_stats.lo ccp4/cmap_stats.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/library_utils.lo ccp4/library_utils.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/ccp4_array.c -fPIC -DPIC -o ccp4/.libs/ccp4_array.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmtzlib.c -fPIC -DPIC -o ccp4/.libs/cmtzlib.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_labels.c -fPIC -DPIC -o ccp4/.libs/cmap_labels.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/csymlib.c -fPIC -DPIC -o ccp4/.libs/csymlib.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_data.c -fPIC -DPIC -o ccp4/.libs/cmap_data.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/ccp4_array.c -fPIC -DPIC -o ccp4/.libs/ccp4_array.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/ccp4_general.c -fPIC -DPIC -o ccp4/.libs/ccp4_general.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/ccp4_parser.c -fPIC -DPIC -o ccp4/.libs/ccp4_parser.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_header.c -fPIC -DPIC -o ccp4/.libs/cmap_header.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/ccp4_program.c -fPIC -DPIC -o ccp4/.libs/ccp4_program.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cvecmat.c -fPIC -DPIC -o ccp4/.libs/cvecmat.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/ccp4_parser.c -fPIC -DPIC -o ccp4/.libs/ccp4_parser.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_labels.c -fPIC -DPIC -o ccp4/.libs/cmap_labels.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/ccp4_program.c -fPIC -DPIC -o ccp4/.libs/ccp4_program.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/ccp4_unitcell.c -fPIC -DPIC -o ccp4/.libs/ccp4_unitcell.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_open.c -fPIC -DPIC -o ccp4/.libs/cmap_open.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/library_err.c -fPIC -DPIC -o ccp4/.libs/library_err.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_accessor.c -fPIC -DPIC -o ccp4/.libs/cmap_accessor.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/library_file.c -fPIC -DPIC -o ccp4/.libs/library_file.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_skew.c -fPIC -DPIC -o ccp4/.libs/cmap_skew.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_stats.c -fPIC -DPIC -o ccp4/.libs/cmap_stats.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/library_utils.c -fPIC -DPIC -o ccp4/.libs/library_utils.o ccp4/ccp4_program.c: In function 'ccp4_vers_no': ccp4/ccp4_program.c:68:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(ccp4version,MAXLEN_PROGVERSION,cfile); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_open.lo ccp4/cmap_open.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/library_err.lo ccp4/library_err.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/ccp4_unitcell.lo ccp4/ccp4_unitcell.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_open.c -fPIC -DPIC -o ccp4/.libs/cmap_open.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/library_err.c -fPIC -DPIC -o ccp4/.libs/library_err.o ccp4/library_err.c: In function 'CFile_Perror': ccp4/library_err.c:247:26: warning: comparison between pointer and zero character constant [-Wpointer-compare] if (msg == NULL || msg == '\0') colon = ""; @@ -626,35 +671,30 @@ ccp4/library_err.c:247:22: note: did you mean to dereference the pointer? if (msg == NULL || msg == '\0') colon = ""; ^ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_skew.lo ccp4/cmap_skew.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/ccp4_unitcell.c -fPIC -DPIC -o ccp4/.libs/ccp4_unitcell.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/library_file.lo ccp4/library_file.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_accessor.lo ccp4/cmap_accessor.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_stats.lo ccp4/cmap_stats.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/library_utils.lo ccp4/library_utils.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_skew.c -fPIC -DPIC -o ccp4/.libs/cmap_skew.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_close.lo ccp4/cmap_close.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/library_file.c -fPIC -DPIC -o ccp4/.libs/library_file.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_accessor.c -fPIC -DPIC -o ccp4/.libs/cmap_accessor.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_stats.c -fPIC -DPIC -o ccp4/.libs/cmap_stats.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/library_utils.c -fPIC -DPIC -o ccp4/.libs/library_utils.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_symop.lo ccp4/cmap_symop.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_close.lo ccp4/cmap_close.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/cmap_symop.lo ccp4/cmap_symop.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/pack_c.lo ccp4/pack_c.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-ccp4_diskio_f.lo `test -f 'fortran/ccp4_diskio_f.c' || echo './'`fortran/ccp4_diskio_f.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-ccp4_parser_f.lo `test -f 'fortran/ccp4_parser_f.c' || echo './'`fortran/ccp4_parser_f.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-cmaplib_f.lo `test -f 'fortran/cmaplib_f.c' || echo './'`fortran/cmaplib_f.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-csymlib_f.lo `test -f 'fortran/csymlib_f.c' || echo './'`fortran/csymlib_f.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-ccp4_general_f.lo `test -f 'fortran/ccp4_general_f.c' || echo './'`fortran/ccp4_general_f.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-ccp4_unitcell_f.lo `test -f 'fortran/ccp4_unitcell_f.c' || echo './'`fortran/ccp4_unitcell_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_close.c -fPIC -DPIC -o ccp4/.libs/cmap_close.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ccp4/pack_c.lo ccp4/pack_c.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-cmtzlib_f.lo `test -f 'fortran/cmtzlib_f.c' || echo './'`fortran/cmtzlib_f.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-library_f.lo `test -f 'fortran/library_f.c' || echo './'`fortran/library_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/cmap_symop.c -fPIC -DPIC -o ccp4/.libs/cmap_symop.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-ccp4_diskio_f.lo `test -f 'fortran/ccp4_diskio_f.c' || echo './'`fortran/ccp4_diskio_f.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-ccp4_parser_f.lo `test -f 'fortran/ccp4_parser_f.c' || echo './'`fortran/ccp4_parser_f.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-cmaplib_f.lo `test -f 'fortran/cmaplib_f.c' || echo './'`fortran/cmaplib_f.c +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/ccplib.lo fortran/ccplib.f libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ccp4/pack_c.c -fPIC -DPIC -o ccp4/.libs/pack_c.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-csymlib_f.lo `test -f 'fortran/csymlib_f.c' || echo './'`fortran/csymlib_f.c +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/fftlib.lo fortran/fftlib.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/modlib.lo fortran/modlib.f libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/ccp4_diskio_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_diskio_f.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/ccp4_parser_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_parser_f.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/csymlib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-csymlib_f.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-ccp4_general_f.lo `test -f 'fortran/ccp4_general_f.c' || echo './'`fortran/ccp4_general_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/cmaplib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-cmaplib_f.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-ccp4_unitcell_f.lo `test -f 'fortran/ccp4_unitcell_f.c' || echo './'`fortran/ccp4_unitcell_f.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/csymlib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-csymlib_f.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/ccp4_parser_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_parser_f.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/ccp4_unitcell_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_unitcell_f.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/cmtzlib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-cmtzlib_f.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/ccp4_general_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_general_f.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-cmtzlib_f.lo `test -f 'fortran/cmtzlib_f.c' || echo './'`fortran/cmtzlib_f.c In file included from fortran/ccp4_general_f.c:34: fortran/ccp4_general_f.c: In function 'ccpfyp_': fortran/ccp4_general_f.c:88:23: warning: implicit declaration of function 'outbuf_'; did you mean 'setbuf'? [-Wimplicit-function-declaration] @@ -700,9 +740,9 @@ ./ccp4/ccp4_fortran.h:187:5: note: in definition of macro 'FORTRAN_CALL' name##_ p_sun ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/ccp4_unitcell_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-ccp4_unitcell_f.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/cmtzlib_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-cmtzlib_f.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fortran/libccp4f_la-library_f.lo `test -f 'fortran/library_f.c' || echo './'`fortran/library_f.c +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/parser.lo fortran/parser.f +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/library_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-library_f.o +libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/ccplib.f -fPIC -o fortran/.libs/ccplib.o In file included from fortran/cmtzlib_f.c:70: fortran/cmtzlib_f.c: In function 'mtzini_': fortran/cmtzlib_f.c:152:33: warning: implicit declaration of function 'ccp4h_init_lib_' [-Wimplicit-function-declaration] @@ -789,6 +829,7 @@ ./ccp4/cmtzlib.h:875:40: note: expected 'const char (*)[80]' but argument is of type 'char *' int MtzAddHistory(MTZ *mtz, const char history[][MTZRECORDLENGTH], const int nlines); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/fftlib.f -fPIC -o fortran/.libs/fftlib.o fortran/cmtzlib_f.c: In function 'lwassn_': fortran/cmtzlib_f.c:2432:46: warning: passing argument 2 of 'ccp4_lwassn' from incompatible pointer type [-Wincompatible-pointer-types] colarray = ccp4_lwassn(mtzdata[*mindx-1],label,*nlprgo,type,*iappnd); @@ -819,18 +860,9 @@ ./ccp4/cmtzlib.h:935:10: note: expected 'const char (*)[3]' but argument is of type 'char *' MTZCOL **ccp4_lwassn(MTZ *mtz, const char labels[][31], const int nlabels, ^~~~~~~~~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -c fortran/library_f.c -fPIC -DPIC -o fortran/.libs/libccp4f_la-library_f.o -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/ccplib.lo fortran/ccplib.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/fftlib.lo fortran/fftlib.f -libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/ccplib.f -fPIC -o fortran/.libs/ccplib.o -libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/fftlib.f -fPIC -o fortran/.libs/fftlib.o -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/modlib.lo fortran/modlib.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/parser.lo fortran/parser.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/rwbrook.lo fortran/rwbrook.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/libhtml.lo fortran/libhtml.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/keyparse.lo fortran/keyparse.f libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/modlib.f -fPIC -o fortran/.libs/modlib.o -libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/parser.f -fPIC -o fortran/.libs/parser.o +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/rwbrook.lo fortran/rwbrook.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/libhtml.lo fortran/libhtml.f fortran/modlib.f:1386:18: fortran/modlib.f:1383:72: @@ -904,60 +936,23 @@ A(I,I) = H 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/keyparse.lo fortran/keyparse.f +libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/parser.f -fPIC -o fortran/.libs/parser.o +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/dna_output.lo fortran/dna_output.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/pack_f.lo fortran/pack_f.f libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/rwbrook.f -fPIC -o fortran/.libs/rwbrook.o -libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/libhtml.f -fPIC -o fortran/.libs/libhtml.o -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/dna_output.lo fortran/dna_output.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/pxxml.lo fortran/pxxml.f libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/keyparse.f -fPIC -o fortran/.libs/keyparse.o +libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/libhtml.f -fPIC -o fortran/.libs/libhtml.o +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/lgglib.lo fortran/lgglib.f libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/dna_output.f -fPIC -o fortran/.libs/dna_output.o -ccp4/cmtzlib.c: In function 'MtzPut': -ccp4/cmtzlib.c:2721:27: warning: '%74s' directive writing between 74 and 80 bytes into a region of size 76 [-Wformat-overflow=] - sprintf(hdrrec,"SYMM %74s",symline); - ^~~~ ~~~~~~~ -In file included from /usr/include/stdio.h:873, - from ccp4/cmtzlib.c:23: -/usr/include/i386-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 80 and 86 bytes into a destination of size 81 - return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - __bos (__s), __fmt, __va_arg_pack ()); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -ccp4/cmtzlib.c:2815:45: warning: '%1X' directive writing between 1 and 8 bytes into a region of size 7 [-Wformat-overflow=] - sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d","M/ISYM",mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); - ^~~ -ccp4/cmtzlib.c:2815:20: note: directive argument in the range [0, 2147483647] - sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d","M/ISYM",mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); - ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/stdio.h:873, - from ccp4/cmtzlib.c:23: -/usr/include/i386-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 81 and 95 bytes into a destination of size 81 - return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - __bos (__s), __fmt, __va_arg_pack ()); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -ccp4/cmtzlib.c:2817:45: warning: '%1X' directive writing between 1 and 8 bytes into a region of size 7 [-Wformat-overflow=] - sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d",mtz->xtal[i]->set[j]->col[k]->label,mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); - ^~~ -ccp4/cmtzlib.c:2817:20: note: directive argument in the range [0, 2147483647] - sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d",mtz->xtal[i]->set[j]->col[k]->label,mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); - ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/stdio.h:873, - from ccp4/cmtzlib.c:23: -/usr/include/i386-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 81 and 95 bytes into a destination of size 81 - return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - __bos (__s), __fmt, __va_arg_pack ()); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/pack_f.lo fortran/pack_f.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/pxxml.lo fortran/pxxml.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/lgglib.lo fortran/lgglib.f libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/pack_f.f -fPIC -o fortran/.libs/pack_f.o -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/plot84lib.lo fortran/plot84lib.f -libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/lgglib.f -fPIC -o fortran/.libs/lgglib.o -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/plotsubs.lo fortran/plotsubs.f libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/pxxml.f -fPIC -o fortran/.libs/pxxml.o -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/sorting_main.lo fortran/sorting_main.f -/bin/bash ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/unix.lo fortran/unix.f -libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/plot84lib.f -fPIC -o fortran/.libs/plot84lib.o -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -no-undefined -Wl,-z,relro -o ccp4/libccp4c.la -rpath /usr/lib/i386-linux-gnu ccp4/ccp4_array.lo ccp4/cmap_data.lo ccp4/cmtzlib.lo ccp4/ccp4_general.lo ccp4/cmap_header.lo ccp4/csymlib.lo ccp4/ccp4_parser.lo ccp4/cmap_labels.lo ccp4/cvecmat.lo ccp4/ccp4_program.lo ccp4/cmap_open.lo ccp4/library_err.lo ccp4/ccp4_unitcell.lo ccp4/cmap_skew.lo ccp4/library_file.lo ccp4/cmap_accessor.lo ccp4/cmap_stats.lo ccp4/library_utils.lo ccp4/cmap_close.lo ccp4/cmap_symop.lo ccp4/pack_c.lo -lm +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/plot84lib.lo fortran/plot84lib.f +libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/lgglib.f -fPIC -o fortran/.libs/lgglib.o +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/plotsubs.lo fortran/plotsubs.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/sorting_main.lo fortran/sorting_main.f +/bin/sh ./libtool --tag=F77 --mode=compile gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c -o fortran/unix.lo fortran/unix.f fortran/lgglib.f:1239:72: CALL matmult(3,3,3,1,ORTH,B3,XYZ,B1) @@ -1005,10 +1000,10 @@ rt(j,4) = gt(4,j) 1 Warning: Array reference at (1) out of bounds (4 > 3) in loop beginning at (2) +libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/plot84lib.f -fPIC -o fortran/.libs/plot84lib.o libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/plotsubs.f -fPIC -o fortran/.libs/plotsubs.o libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/sorting_main.f -fPIC -o fortran/.libs/sorting_main.o libtool: compile: gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -c fortran/unix.f -fPIC -o fortran/.libs/unix.o -libtool: link: gcc -shared -fPIC -DPIC ccp4/.libs/ccp4_array.o ccp4/.libs/cmap_data.o ccp4/.libs/cmtzlib.o ccp4/.libs/ccp4_general.o ccp4/.libs/cmap_header.o ccp4/.libs/csymlib.o ccp4/.libs/ccp4_parser.o ccp4/.libs/cmap_labels.o ccp4/.libs/cvecmat.o ccp4/.libs/ccp4_program.o ccp4/.libs/cmap_open.o ccp4/.libs/library_err.o ccp4/.libs/ccp4_unitcell.o ccp4/.libs/cmap_skew.o ccp4/.libs/library_file.o ccp4/.libs/cmap_accessor.o ccp4/.libs/cmap_stats.o ccp4/.libs/library_utils.o ccp4/.libs/cmap_close.o ccp4/.libs/cmap_symop.o ccp4/.libs/pack_c.o -lm -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-soname -Wl,libccp4c.so.0 -o ccp4/.libs/libccp4c.so.0.0.0 fortran/plot84lib.f:8301:22: CALL AXIS(X,Y,HTEXT,NCHAR,AXLEN,ANGLE,FVAL,DV) @@ -1019,10 +1014,49 @@ CALL TRIPLOT(ICLEAR,1) 1 Warning: Rank mismatch in argument 'line' at (1) (rank-1 and scalar) [-Wargument-mismatch] +ccp4/cmtzlib.c: In function 'MtzPut': +ccp4/cmtzlib.c:2721:27: warning: '%74s' directive writing between 74 and 80 bytes into a region of size 76 [-Wformat-overflow=] + sprintf(hdrrec,"SYMM %74s",symline); + ^~~~ ~~~~~~~ +In file included from /usr/include/stdio.h:873, + from ccp4/cmtzlib.c:23: +/usr/include/i386-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 80 and 86 bytes into a destination of size 81 + return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + __bos (__s), __fmt, __va_arg_pack ()); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +ccp4/cmtzlib.c:2815:45: warning: '%1X' directive writing between 1 and 8 bytes into a region of size 7 [-Wformat-overflow=] + sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d","M/ISYM",mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); + ^~~ +ccp4/cmtzlib.c:2815:20: note: directive argument in the range [0, 2147483647] + sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d","M/ISYM",mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); + ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/stdio.h:873, + from ccp4/cmtzlib.c:23: +/usr/include/i386-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 81 and 95 bytes into a destination of size 81 + return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + __bos (__s), __fmt, __va_arg_pack ()); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +ccp4/cmtzlib.c:2817:45: warning: '%1X' directive writing between 1 and 8 bytes into a region of size 7 [-Wformat-overflow=] + sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d",mtz->xtal[i]->set[j]->col[k]->label,mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); + ^~~ +ccp4/cmtzlib.c:2817:20: note: directive argument in the range [0, 2147483647] + sprintf(hdrrec,"COLGRP %-30s %-30s %-4s %1X %4d",mtz->xtal[i]->set[j]->col[k]->label,mtz->xtal[i]->set[j]->col[k]->grpname,mtz->xtal[i]->set[j]->col[k]->grptype,mtz->xtal[i]->set[j]->col[k]->grpposn,mtz->xtal[i]->set[j]->setid); + ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/stdio.h:873, + from ccp4/cmtzlib.c:23: +/usr/include/i386-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 81 and 95 bytes into a destination of size 81 + return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + __bos (__s), __fmt, __va_arg_pack ()); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -no-undefined -Wl,-z,relro -o ccp4/libccp4c.la -rpath /usr/lib/i386-linux-gnu ccp4/ccp4_array.lo ccp4/cmap_data.lo ccp4/cmtzlib.lo ccp4/ccp4_general.lo ccp4/cmap_header.lo ccp4/csymlib.lo ccp4/ccp4_parser.lo ccp4/cmap_labels.lo ccp4/cvecmat.lo ccp4/ccp4_program.lo ccp4/cmap_open.lo ccp4/library_err.lo ccp4/ccp4_unitcell.lo ccp4/cmap_skew.lo ccp4/library_file.lo ccp4/cmap_accessor.lo ccp4/cmap_stats.lo ccp4/library_utils.lo ccp4/cmap_close.lo ccp4/cmap_symop.lo ccp4/pack_c.lo -lm +libtool: link: gcc -shared -fPIC -DPIC ccp4/.libs/ccp4_array.o ccp4/.libs/cmap_data.o ccp4/.libs/cmtzlib.o ccp4/.libs/ccp4_general.o ccp4/.libs/cmap_header.o ccp4/.libs/csymlib.o ccp4/.libs/ccp4_parser.o ccp4/.libs/cmap_labels.o ccp4/.libs/cvecmat.o ccp4/.libs/ccp4_program.o ccp4/.libs/cmap_open.o ccp4/.libs/library_err.o ccp4/.libs/ccp4_unitcell.o ccp4/.libs/cmap_skew.o ccp4/.libs/library_file.o ccp4/.libs/cmap_accessor.o ccp4/.libs/cmap_stats.o ccp4/.libs/library_utils.o ccp4/.libs/cmap_close.o ccp4/.libs/cmap_symop.o ccp4/.libs/pack_c.o -lm -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-soname -Wl,libccp4c.so.0 -o ccp4/.libs/libccp4c.so.0.0.0 libtool: link: (cd "ccp4/.libs" && rm -f "libccp4c.so.0" && ln -s "libccp4c.so.0.0.0" "libccp4c.so.0") libtool: link: (cd "ccp4/.libs" && rm -f "libccp4c.so" && ln -s "libccp4c.so.0.0.0" "libccp4c.so") libtool: link: ( cd "ccp4/.libs" && rm -f "libccp4c.la" && ln -s "../libccp4c.la" "libccp4c.la" ) -/bin/bash ./libtool --tag=F77 --mode=link gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -no-undefined -Wl,-z,relro -o fortran/libccp4f.la -rpath /usr/lib/i386-linux-gnu fortran/libccp4f_la-ccp4_diskio_f.lo fortran/libccp4f_la-ccp4_parser_f.lo fortran/libccp4f_la-cmaplib_f.lo fortran/libccp4f_la-csymlib_f.lo fortran/libccp4f_la-ccp4_general_f.lo fortran/libccp4f_la-ccp4_unitcell_f.lo fortran/libccp4f_la-cmtzlib_f.lo fortran/libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb2 -lm +/bin/sh ./libtool --tag=F77 --mode=link gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -no-undefined -Wl,-z,relro -o fortran/libccp4f.la -rpath /usr/lib/i386-linux-gnu fortran/libccp4f_la-ccp4_diskio_f.lo fortran/libccp4f_la-ccp4_parser_f.lo fortran/libccp4f_la-cmaplib_f.lo fortran/libccp4f_la-csymlib_f.lo fortran/libccp4f_la-ccp4_general_f.lo fortran/libccp4f_la-ccp4_unitcell_f.lo fortran/libccp4f_la-cmtzlib_f.lo fortran/libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb2 -lm libtool: link: gfortran -shared -fPIC fortran/.libs/libccp4f_la-ccp4_diskio_f.o fortran/.libs/libccp4f_la-ccp4_parser_f.o fortran/.libs/libccp4f_la-cmaplib_f.o fortran/.libs/libccp4f_la-csymlib_f.o fortran/.libs/libccp4f_la-ccp4_general_f.o fortran/.libs/libccp4f_la-ccp4_unitcell_f.o fortran/.libs/libccp4f_la-cmtzlib_f.o fortran/.libs/libccp4f_la-library_f.o fortran/.libs/ccplib.o fortran/.libs/fftlib.o fortran/.libs/modlib.o fortran/.libs/parser.o fortran/.libs/rwbrook.o fortran/.libs/libhtml.o fortran/.libs/keyparse.o fortran/.libs/dna_output.o fortran/.libs/pack_f.o fortran/.libs/pxxml.o fortran/.libs/lgglib.o fortran/.libs/plot84lib.o fortran/.libs/plotsubs.o fortran/.libs/sorting_main.o fortran/.libs/unix.o -Wl,-rpath -Wl,/build/libccp4-6.5.1/ccp4/.libs ccp4/.libs/libccp4c.so -lmmdb2 -lm -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-soname -Wl,libccp4f.so.0 -o fortran/.libs/libccp4f.so.0.0.0 libtool: link: (cd "fortran/.libs" && rm -f "libccp4f.so.0" && ln -s "libccp4f.so.0.0.0" "libccp4f.so.0") libtool: link: (cd "fortran/.libs" && rm -f "libccp4f.so" && ln -s "libccp4f.so.0.0.0" "libccp4f.so") @@ -1030,7 +1064,7 @@ make[2]: Leaving directory '/build/libccp4-6.5.1' make[1]: Leaving directory '/build/libccp4-6.5.1' dh_auto_test - make -j10 check VERBOSE=1 + make -j18 check VERBOSE=1 make[1]: Entering directory '/build/libccp4-6.5.1' make check-am make[2]: Entering directory '/build/libccp4-6.5.1' @@ -1048,13 +1082,13 @@ make[2]: Entering directory '/build/libccp4-6.5.1' make[3]: Entering directory '/build/libccp4-6.5.1' /bin/mkdir -p '/build/libccp4-6.5.1/debian/tmp/usr/lib/i386-linux-gnu' - /bin/bash ./libtool --mode=install /usr/bin/install -c ccp4/libccp4c.la fortran/libccp4f.la '/build/libccp4-6.5.1/debian/tmp/usr/lib/i386-linux-gnu' + /bin/sh ./libtool --mode=install /usr/bin/install -c ccp4/libccp4c.la fortran/libccp4f.la '/build/libccp4-6.5.1/debian/tmp/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c ccp4/.libs/libccp4c.so.0.0.0 /build/libccp4-6.5.1/debian/tmp/usr/lib/i386-linux-gnu/libccp4c.so.0.0.0 libtool: install: (cd /build/libccp4-6.5.1/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libccp4c.so.0.0.0 libccp4c.so.0 || { rm -f libccp4c.so.0 && ln -s libccp4c.so.0.0.0 libccp4c.so.0; }; }) libtool: install: (cd /build/libccp4-6.5.1/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libccp4c.so.0.0.0 libccp4c.so || { rm -f libccp4c.so && ln -s libccp4c.so.0.0.0 libccp4c.so; }; }) libtool: install: /usr/bin/install -c ccp4/.libs/libccp4c.lai /build/libccp4-6.5.1/debian/tmp/usr/lib/i386-linux-gnu/libccp4c.la libtool: warning: relinking 'fortran/libccp4f.la' -libtool: install: (cd /build/libccp4-6.5.1; /bin/bash "/build/libccp4-6.5.1/libtool" --tag F77 --mode=relink gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -no-undefined -Wl,-z,relro -o fortran/libccp4f.la -rpath /usr/lib/i386-linux-gnu fortran/libccp4f_la-ccp4_diskio_f.lo fortran/libccp4f_la-ccp4_parser_f.lo fortran/libccp4f_la-cmaplib_f.lo fortran/libccp4f_la-csymlib_f.lo fortran/libccp4f_la-ccp4_general_f.lo fortran/libccp4f_la-ccp4_unitcell_f.lo fortran/libccp4f_la-cmtzlib_f.lo fortran/libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb2 -lm -inst-prefix-dir /build/libccp4-6.5.1/debian/tmp) +libtool: install: (cd /build/libccp4-6.5.1; /bin/sh "/build/libccp4-6.5.1/libtool" --tag F77 --mode=relink gfortran -fno-second-underscore -g -O2 -ffile-prefix-map=/build/libccp4-6.5.1=. -fstack-protector-strong -no-undefined -Wl,-z,relro -o fortran/libccp4f.la -rpath /usr/lib/i386-linux-gnu fortran/libccp4f_la-ccp4_diskio_f.lo fortran/libccp4f_la-ccp4_parser_f.lo fortran/libccp4f_la-cmaplib_f.lo fortran/libccp4f_la-csymlib_f.lo fortran/libccp4f_la-ccp4_general_f.lo fortran/libccp4f_la-ccp4_unitcell_f.lo fortran/libccp4f_la-cmtzlib_f.lo fortran/libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb2 -lm -inst-prefix-dir /build/libccp4-6.5.1/debian/tmp) libtool: relink: gfortran -shared -fPIC fortran/.libs/libccp4f_la-ccp4_diskio_f.o fortran/.libs/libccp4f_la-ccp4_parser_f.o fortran/.libs/libccp4f_la-cmaplib_f.o fortran/.libs/libccp4f_la-csymlib_f.o fortran/.libs/libccp4f_la-ccp4_general_f.o fortran/.libs/libccp4f_la-ccp4_unitcell_f.o fortran/.libs/libccp4f_la-cmtzlib_f.o fortran/.libs/libccp4f_la-library_f.o fortran/.libs/ccplib.o fortran/.libs/fftlib.o fortran/.libs/modlib.o fortran/.libs/parser.o fortran/.libs/rwbrook.o fortran/.libs/libhtml.o fortran/.libs/keyparse.o fortran/.libs/dna_output.o fortran/.libs/pack_f.o fortran/.libs/pxxml.o fortran/.libs/lgglib.o fortran/.libs/plot84lib.o fortran/.libs/plotsubs.o fortran/.libs/sorting_main.o fortran/.libs/unix.o -L/build/libccp4-6.5.1/debian/tmp/usr/lib/i386-linux-gnu -L/usr/lib/i386-linux-gnu -lccp4c -lmmdb2 -lm -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-soname -Wl,libccp4f.so.0 -o fortran/.libs/libccp4f.so.0.0.0 libtool: install: /usr/bin/install -c fortran/.libs/libccp4f.so.0.0.0T /build/libccp4-6.5.1/debian/tmp/usr/lib/i386-linux-gnu/libccp4f.so.0.0.0 libtool: install: (cd /build/libccp4-6.5.1/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libccp4f.so.0.0.0 libccp4f.so.0 || { rm -f libccp4f.so.0 && ln -s libccp4f.so.0.0.0 libccp4f.so.0; }; }) @@ -1106,24 +1140,26 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'libccp4f0-dbgsym' in '../libccp4f0-dbgsym_6.5.1-1_i386.deb'. -dpkg-deb: building package 'libccp4-data' in '../libccp4-data_6.5.1-1_all.deb'. dpkg-deb: building package 'libccp4c0' in '../libccp4c0_6.5.1-1_i386.deb'. +dpkg-deb: building package 'libccp4f0' in '../libccp4f0_6.5.1-1_i386.deb'. +dpkg-deb: building package 'libccp4-data' in '../libccp4-data_6.5.1-1_all.deb'. dpkg-deb: building package 'libccp4-dev' in '../libccp4-dev_6.5.1-1_i386.deb'. dpkg-deb: building package 'libccp4c0-dbgsym' in '../libccp4c0-dbgsym_6.5.1-1_i386.deb'. -dpkg-deb: building package 'libccp4f0' in '../libccp4f0_6.5.1-1_i386.deb'. +dpkg-deb: building package 'libccp4f0-dbgsym' in '../libccp4f0-dbgsym_6.5.1-1_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libccp4_6.5.1-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration +I: user script /srv/workspace/pbuilder/37348/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/37348/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/5036 and its subdirectories -I: Current time: Thu Sep 24 01:20:41 -12 2020 -I: pbuilder-time-stamp: 1600953641 +I: removing directory /srv/workspace/pbuilder/37348 and its subdirectories +I: Current time: Thu Oct 28 09:46:24 +14 2021 +I: pbuilder-time-stamp: 1635363984