Diff of the two buildlogs: -- --- b1/build.log 2020-06-30 21:30:38.986604020 +0000 +++ b2/build.log 2020-06-30 21:38:58.723048547 +0000 @@ -1,7 +1,6 @@ -W: cgroups are not available on the host, not using them. I: pbuilder: network access will be disabled during build -I: Current time: Tue Jun 30 08:59:10 -12 2020 -I: pbuilder-time-stamp: 1593550750 +I: Current time: Wed Jul 1 11:31:05 +14 2020 +I: pbuilder-time-stamp: 1593552665 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -18,7 +17,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Tue Oct 9 00:45:51 2018 -12 +gpgv: Signature made Wed Oct 10 02:45:51 2018 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -30,135 +29,170 @@ dpkg-source: info: applying rpath.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/14590/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/15365/tmp/hooks/D01_modify_environment starting +debug: Running on ff2b. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/15365/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/15365/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.0.3(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='14590' - PS1='# ' - PS2='> ' + INVOCATION_ID=ed1f17b9b16f4c4694a0ed78f0879580 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=15365 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.hZLpy9IbGX/pbuilderrc_psgm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.hZLpy9IbGX/b1 --logfile b1/build.log fast5_0.6.5-2.dsc' - SUDO_GID='115' - SUDO_UID='110' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/sbin/chroot' - http_proxy='http://10.0.0.15:8000/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.hZLpy9IbGX/pbuilderrc_mRan --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.hZLpy9IbGX/b2 --logfile b2/build.log fast5_0.6.5-2.dsc' + SUDO_GID=114 + SUDO_UID=109 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:8000/ I: uname -a - Linux p64c 4.19.0-9-arm64 #1 SMP Debian 4.19.118-2+deb10u1 (2020-06-07) aarch64 GNU/Linux + Linux i-capture-the-hostname 4.19.0-9-armmp-lpae #1 SMP Debian 4.19.118-2+deb10u1 (2020-06-07) armv7l GNU/Linux I: ls -l /bin total 3328 - -rwxr-xr-x 1 root root 767656 Apr 17 2019 bash - -rwxr-xr-x 3 root root 26052 Jul 10 2019 bunzip2 - -rwxr-xr-x 3 root root 26052 Jul 10 2019 bzcat - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep - -rwxr-xr-x 3 root root 26052 Jul 10 2019 bzip2 - -rwxr-xr-x 1 root root 9636 Jul 10 2019 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore - -rwxr-xr-x 1 root root 22432 Feb 28 2019 cat - -rwxr-xr-x 1 root root 38868 Feb 28 2019 chgrp - -rwxr-xr-x 1 root root 38836 Feb 28 2019 chmod - -rwxr-xr-x 1 root root 42972 Feb 28 2019 chown - -rwxr-xr-x 1 root root 88376 Feb 28 2019 cp - -rwxr-xr-x 1 root root 75516 Jan 17 2019 dash - -rwxr-xr-x 1 root root 71648 Feb 28 2019 date - -rwxr-xr-x 1 root root 51212 Feb 28 2019 dd - -rwxr-xr-x 1 root root 55672 Feb 28 2019 df - -rwxr-xr-x 1 root root 88444 Feb 28 2019 dir - -rwxr-xr-x 1 root root 54872 Jan 9 2019 dmesg - lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname - -rwxr-xr-x 1 root root 22364 Feb 28 2019 echo - -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep - -rwxr-xr-x 1 root root 18260 Feb 28 2019 false - -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep - -rwxr-xr-x 1 root root 47356 Jan 9 2019 findmnt - -rwsr-xr-x 1 root root 21980 Apr 22 07:38 fusermount - -rwxr-xr-x 1 root root 124508 Jan 7 2019 grep - -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip - -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe - -rwxr-xr-x 1 root root 64232 Jan 5 2019 gzip - -rwxr-xr-x 1 root root 13784 Sep 26 2018 hostname - -rwxr-xr-x 1 root root 43044 Feb 28 2019 ln - -rwxr-xr-x 1 root root 34932 Jul 26 2018 login - -rwxr-xr-x 1 root root 88444 Feb 28 2019 ls - -rwxr-xr-x 1 root root 67036 Jan 9 2019 lsblk - -rwxr-xr-x 1 root root 47168 Feb 28 2019 mkdir - -rwxr-xr-x 1 root root 43040 Feb 28 2019 mknod - -rwxr-xr-x 1 root root 26552 Feb 28 2019 mktemp - -rwxr-xr-x 1 root root 26024 Jan 9 2019 more - -rwsr-xr-x 1 root root 34268 Jan 9 2019 mount - -rwxr-xr-x 1 root root 9688 Jan 9 2019 mountpoint - -rwxr-xr-x 1 root root 84284 Feb 28 2019 mv - lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 22416 Feb 28 2019 pwd - lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash - -rwxr-xr-x 1 root root 26504 Feb 28 2019 readlink - -rwxr-xr-x 1 root root 42968 Feb 28 2019 rm - -rwxr-xr-x 1 root root 26496 Feb 28 2019 rmdir - -rwxr-xr-x 1 root root 14136 Jan 21 2019 run-parts - -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jun 29 20:32 sh -> dash - -rwxr-xr-x 1 root root 22384 Feb 28 2019 sleep - -rwxr-xr-x 1 root root 51124 Feb 28 2019 stty - -rwsr-xr-x 1 root root 42472 Jan 9 2019 su - -rwxr-xr-x 1 root root 22392 Feb 28 2019 sync - -rwxr-xr-x 1 root root 283324 Apr 23 2019 tar - -rwxr-xr-x 1 root root 9808 Jan 21 2019 tempfile - -rwxr-xr-x 1 root root 63464 Feb 28 2019 touch - -rwxr-xr-x 1 root root 18260 Feb 28 2019 true - -rwxr-xr-x 1 root root 9636 Apr 22 07:38 ulockmgr_server - -rwsr-xr-x 1 root root 21976 Jan 9 2019 umount - -rwxr-xr-x 1 root root 22380 Feb 28 2019 uname - -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress - -rwxr-xr-x 1 root root 88444 Feb 28 2019 vdir - -rwxr-xr-x 1 root root 21980 Jan 9 2019 wdctl - -rwxr-xr-x 1 root root 946 Jan 21 2019 which - lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat - -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp - -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff - -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep - -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep - -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce - -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep - -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless - -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore - -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew -I: user script /srv/workspace/pbuilder/14590/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 767656 Apr 18 2019 bash + -rwxr-xr-x 3 root root 26052 Jul 11 2019 bunzip2 + -rwxr-xr-x 3 root root 26052 Jul 11 2019 bzcat + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep + -rwxr-xr-x 3 root root 26052 Jul 11 2019 bzip2 + -rwxr-xr-x 1 root root 9636 Jul 11 2019 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore + -rwxr-xr-x 1 root root 22432 Mar 1 2019 cat + -rwxr-xr-x 1 root root 38868 Mar 1 2019 chgrp + -rwxr-xr-x 1 root root 38836 Mar 1 2019 chmod + -rwxr-xr-x 1 root root 42972 Mar 1 2019 chown + -rwxr-xr-x 1 root root 88376 Mar 1 2019 cp + -rwxr-xr-x 1 root root 75516 Jan 18 2019 dash + -rwxr-xr-x 1 root root 71648 Mar 1 2019 date + -rwxr-xr-x 1 root root 51212 Mar 1 2019 dd + -rwxr-xr-x 1 root root 55672 Mar 1 2019 df + -rwxr-xr-x 1 root root 88444 Mar 1 2019 dir + -rwxr-xr-x 1 root root 54872 Jan 10 2019 dmesg + lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname + -rwxr-xr-x 1 root root 22364 Mar 1 2019 echo + -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep + -rwxr-xr-x 1 root root 18260 Mar 1 2019 false + -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep + -rwxr-xr-x 1 root root 47356 Jan 10 2019 findmnt + -rwsr-xr-x 1 root root 21980 Apr 23 09:38 fusermount + -rwxr-xr-x 1 root root 124508 Jan 8 2019 grep + -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip + -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe + -rwxr-xr-x 1 root root 64232 Jan 6 2019 gzip + -rwxr-xr-x 1 root root 13784 Sep 27 2018 hostname + -rwxr-xr-x 1 root root 43044 Mar 1 2019 ln + -rwxr-xr-x 1 root root 34932 Jul 27 2018 login + -rwxr-xr-x 1 root root 88444 Mar 1 2019 ls + -rwxr-xr-x 1 root root 67036 Jan 10 2019 lsblk + -rwxr-xr-x 1 root root 47168 Mar 1 2019 mkdir + -rwxr-xr-x 1 root root 43040 Mar 1 2019 mknod + -rwxr-xr-x 1 root root 26552 Mar 1 2019 mktemp + -rwxr-xr-x 1 root root 26024 Jan 10 2019 more + -rwsr-xr-x 1 root root 34268 Jan 10 2019 mount + -rwxr-xr-x 1 root root 9688 Jan 10 2019 mountpoint + -rwxr-xr-x 1 root root 84284 Mar 1 2019 mv + lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 22416 Mar 1 2019 pwd + lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash + -rwxr-xr-x 1 root root 26504 Mar 1 2019 readlink + -rwxr-xr-x 1 root root 42968 Mar 1 2019 rm + -rwxr-xr-x 1 root root 26496 Mar 1 2019 rmdir + -rwxr-xr-x 1 root root 14136 Jan 22 2019 run-parts + -rwxr-xr-x 1 root root 76012 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jul 1 11:31 sh -> bash + lrwxrwxrwx 1 root root 4 Jun 29 22:25 sh.distrib -> dash + -rwxr-xr-x 1 root root 22384 Mar 1 2019 sleep + -rwxr-xr-x 1 root root 51124 Mar 1 2019 stty + -rwsr-xr-x 1 root root 42472 Jan 10 2019 su + -rwxr-xr-x 1 root root 22392 Mar 1 2019 sync + -rwxr-xr-x 1 root root 283324 Apr 24 2019 tar + -rwxr-xr-x 1 root root 9808 Jan 22 2019 tempfile + -rwxr-xr-x 1 root root 63464 Mar 1 2019 touch + -rwxr-xr-x 1 root root 18260 Mar 1 2019 true + -rwxr-xr-x 1 root root 9636 Apr 23 09:38 ulockmgr_server + -rwsr-xr-x 1 root root 21976 Jan 10 2019 umount + -rwxr-xr-x 1 root root 22380 Mar 1 2019 uname + -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress + -rwxr-xr-x 1 root root 88444 Mar 1 2019 vdir + -rwxr-xr-x 1 root root 21980 Jan 10 2019 wdctl + -rwxr-xr-x 1 root root 946 Jan 22 2019 which + lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat + -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp + -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff + -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep + -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep + -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce + -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep + -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless + -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore + -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew +I: user script /srv/workspace/pbuilder/15365/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -312,7 +346,7 @@ Get: 98 http://deb.debian.org/debian buster/main armhf python3-all-dev armhf 3.7.3-1 [1064 B] Get: 99 http://deb.debian.org/debian buster/main armhf python3-pkg-resources all 40.8.0-1 [153 kB] Get: 100 http://deb.debian.org/debian buster/main armhf python3-setuptools all 40.8.0-1 [306 kB] -Fetched 127 MB in 17s (7299 kB/s) +Fetched 127 MB in 38s (3322 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18932 files and directories currently installed.) @@ -740,7 +774,7 @@ fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/fast5-0.6.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b +I: Running cd /build/fast5-0.6.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package fast5 dpkg-buildpackage: info: source version 0.6.5-2 dpkg-buildpackage: info: source distribution unstable @@ -752,11 +786,11 @@ dh clean --with python2,python3 --buildsystem=pybuild \ --sourcedirectory=python debian/rules override_dh_auto_clean -make[1]: Entering directory '/build/fast5-0.6.5' +make[1]: ingresso nella directory "/build/fast5-0.6.5" cd src && /usr/bin/make clean -make[2]: Entering directory '/build/fast5-0.6.5/src' +make[2]: ingresso nella directory "/build/fast5-0.6.5/src" rm -rf f5ls f5ls-full hdf5-mod f5-mod f5dump f5pack -make[2]: Leaving directory '/build/fast5-0.6.5/src' +make[2]: uscita dalla directory "/build/fast5-0.6.5/src" dh_auto_clean I: pybuild base:217: python2.7 setup.py clean /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/fast5-0.6.5/python/fast5/fast5.pyx @@ -773,7 +807,7 @@ 'build/bdist.linux-armhf' does not exist -- can't clean it 'build/scripts-3.7' does not exist -- can't clean it rm -rf python/fast5/fast5.cpp -make[1]: Leaving directory '/build/fast5-0.6.5' +make[1]: uscita dalla directory "/build/fast5-0.6.5" dh_autoreconf_clean -O--buildsystem=pybuild -O--sourcedirectory=python dh_clean -O--buildsystem=pybuild -O--sourcedirectory=python debian/rules build @@ -850,8 +884,8 @@ creating build/scripts-2.7 copying and adjusting bin/f5ls -> build/scripts-2.7 copying and adjusting bin/f5pack -> build/scripts-2.7 -changing mode of build/scripts-2.7/f5ls from 644 to 755 -changing mode of build/scripts-2.7/f5pack from 644 to 755 +changing mode of build/scripts-2.7/f5ls from 664 to 775 +changing mode of build/scripts-2.7/f5pack from 664 to 775 I: pybuild base:217: /usr/bin/python3 setup.py build running build running build_ext @@ -909,12 +943,12 @@ creating build/scripts-3.7 copying and adjusting bin/f5ls -> build/scripts-3.7 copying and adjusting bin/f5pack -> build/scripts-3.7 -changing mode of build/scripts-3.7/f5ls from 644 to 755 -changing mode of build/scripts-3.7/f5pack from 644 to 755 +changing mode of build/scripts-3.7/f5ls from 664 to 775 +changing mode of build/scripts-3.7/f5pack from 664 to 775 debian/rules override_dh_auto_test -make[1]: Entering directory '/build/fast5-0.6.5' +make[1]: ingresso nella directory "/build/fast5-0.6.5" cd src && /usr/bin/make -make[2]: Entering directory '/build/fast5-0.6.5/src' +make[2]: ingresso nella directory "/build/fast5-0.6.5/src" g++ -std=c++11 -O0 -g3 -ggdb -fno-eliminate-unused-debug-types -Wall -Wextra -Wpedantic -isystem /usr/include/hdf5/serial -I /build/fast5-0.6.5/src/../include -o f5ls f5ls.cpp -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -Wl,--rpath=/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -lpthread -lz -ldl In file included from /usr/include/c++/8/vector:64, from /build/fast5-0.6.5/src/../include/fast5.hpp:19, @@ -1665,8 +1699,8 @@ __uninit_copy(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:76:9: note: parameter passing for argument of type ‘std::move_iterator’ changed in GCC 7.1 -make[2]: Leaving directory '/build/fast5-0.6.5/src' -make[1]: Leaving directory '/build/fast5-0.6.5' +make[2]: uscita dalla directory "/build/fast5-0.6.5/src" +make[1]: uscita dalla directory "/build/fast5-0.6.5" create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with python2,python3 --buildsystem=pybuild \ @@ -1701,8 +1735,8 @@ creating /build/fast5-0.6.5/debian/python-fast5/usr/bin copying build/scripts-2.7/f5ls -> /build/fast5-0.6.5/debian/python-fast5/usr/bin copying build/scripts-2.7/f5pack -> /build/fast5-0.6.5/debian/python-fast5/usr/bin -changing mode of /build/fast5-0.6.5/debian/python-fast5/usr/bin/f5ls to 755 -changing mode of /build/fast5-0.6.5/debian/python-fast5/usr/bin/f5pack to 755 +changing mode of /build/fast5-0.6.5/debian/python-fast5/usr/bin/f5ls to 775 +changing mode of /build/fast5-0.6.5/debian/python-fast5/usr/bin/f5pack to 775 I: pybuild base:217: /usr/bin/python3 setup.py install --root /build/fast5-0.6.5/debian/python3-fast5 running install running build @@ -1728,15 +1762,15 @@ creating /build/fast5-0.6.5/debian/python3-fast5/usr/bin copying build/scripts-3.7/f5ls -> /build/fast5-0.6.5/debian/python3-fast5/usr/bin copying build/scripts-3.7/f5pack -> /build/fast5-0.6.5/debian/python3-fast5/usr/bin -changing mode of /build/fast5-0.6.5/debian/python3-fast5/usr/bin/f5ls to 755 -changing mode of /build/fast5-0.6.5/debian/python3-fast5/usr/bin/f5pack to 755 +changing mode of /build/fast5-0.6.5/debian/python3-fast5/usr/bin/f5ls to 775 +changing mode of /build/fast5-0.6.5/debian/python3-fast5/usr/bin/f5pack to 775 debian/rules override_dh_install -make[1]: Entering directory '/build/fast5-0.6.5' +make[1]: ingresso nella directory "/build/fast5-0.6.5" dh_install mkdir -p debian/fast5/usr/bin/ mv debian/python3-fast5/usr/bin/* debian/fast5/usr/bin/ rm -rf debian/python-fast5/usr/bin/ debian/python3-fast5/usr/bin/ -make[1]: Leaving directory '/build/fast5-0.6.5' +make[1]: uscita dalla directory "/build/fast5-0.6.5" dh_installdocs -O--buildsystem=pybuild -O--sourcedirectory=python dh_installchangelogs -O--buildsystem=pybuild -O--sourcedirectory=python dh_installexamples -O--buildsystem=pybuild -O--sourcedirectory=python @@ -1748,13 +1782,13 @@ dh_link -O--buildsystem=pybuild -O--sourcedirectory=python dh_strip_nondeterminism -O--buildsystem=pybuild -O--sourcedirectory=python debian/rules override_dh_compress -make[1]: Entering directory '/build/fast5-0.6.5' +make[1]: ingresso nella directory "/build/fast5-0.6.5" cd src && /usr/bin/make clean -make[2]: Entering directory '/build/fast5-0.6.5/src' +make[2]: ingresso nella directory "/build/fast5-0.6.5/src" rm -rf f5ls f5ls-full hdf5-mod f5-mod f5dump f5pack -make[2]: Leaving directory '/build/fast5-0.6.5/src' +make[2]: uscita dalla directory "/build/fast5-0.6.5/src" dh_compress -X .cpp -X .hpp -make[1]: Leaving directory '/build/fast5-0.6.5' +make[1]: uscita dalla directory "/build/fast5-0.6.5" dh_fixperms -O--buildsystem=pybuild -O--sourcedirectory=python dh_missing -O--buildsystem=pybuild -O--sourcedirectory=python dh_strip -O--buildsystem=pybuild -O--sourcedirectory=python @@ -1764,20 +1798,20 @@ dh_gencontrol -O--buildsystem=pybuild -O--sourcedirectory=python dpkg-gencontrol: warning: package python-fast5: substitution variable ${python:Provides} unused, but is defined dpkg-gencontrol: warning: package python-fast5: substitution variable ${python:Versions} unused, but is defined -dpkg-gencontrol: warning: package python-fast5: substitution variable ${python:Provides} unused, but is defined -dpkg-gencontrol: warning: package python-fast5: substitution variable ${python:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-fast5: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-fast5: substitution variable ${python3:Versions} unused, but is defined +dpkg-gencontrol: warning: package python-fast5: substitution variable ${python:Provides} unused, but is defined +dpkg-gencontrol: warning: package python-fast5: substitution variable ${python:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-fast5: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-fast5: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -O--buildsystem=pybuild -O--sourcedirectory=python dh_builddeb -O--buildsystem=pybuild -O--sourcedirectory=python -dpkg-deb: building package 'fast5' in '../fast5_0.6.5-2_all.deb'. -dpkg-deb: building package 'python-fast5' in '../python-fast5_0.6.5-2_armhf.deb'. -dpkg-deb: building package 'python3-fast5' in '../python3-fast5_0.6.5-2_armhf.deb'. -dpkg-deb: building package 'libfast5-dev' in '../libfast5-dev_0.6.5-2_all.deb'. -dpkg-deb: building package 'python3-fast5-dbgsym' in '../python3-fast5-dbgsym_0.6.5-2_armhf.deb'. -dpkg-deb: building package 'python-fast5-dbgsym' in '../python-fast5-dbgsym_0.6.5-2_armhf.deb'. +dpkg-deb: generazione del pacchetto "fast5" in "../fast5_0.6.5-2_all.deb". +dpkg-deb: generazione del pacchetto "python-fast5" in "../python-fast5_0.6.5-2_armhf.deb". +dpkg-deb: generazione del pacchetto "python3-fast5" in "../python3-fast5_0.6.5-2_armhf.deb". +dpkg-deb: generazione del pacchetto "libfast5-dev" in "../libfast5-dev_0.6.5-2_all.deb". +dpkg-deb: generazione del pacchetto "python3-fast5-dbgsym" in "../python3-fast5-dbgsym_0.6.5-2_armhf.deb". +dpkg-deb: generazione del pacchetto "python-fast5-dbgsym" in "../python-fast5-dbgsym_0.6.5-2_armhf.deb". dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../fast5_0.6.5-2_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1785,12 +1819,14 @@ dpkg-source: info: using options from fast5-0.6.5/debian/source/options: --extend-diff-ignore=^[^/]+\.egg-info/|python/fast5/fast5.cpp dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration +I: user script /srv/workspace/pbuilder/15365/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/15365/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/14590 and its subdirectories -I: Current time: Tue Jun 30 09:30:29 -12 2020 -I: pbuilder-time-stamp: 1593552629 +I: removing directory /srv/workspace/pbuilder/15365 and its subdirectories +I: Current time: Wed Jul 1 11:38:48 +14 2020 +I: pbuilder-time-stamp: 1593553128