Diff of the two buildlogs: -- --- b1/build.log 2020-07-31 02:47:56.716982535 +0000 +++ b2/build.log 2020-07-31 03:02:42.525501102 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Sep 1 21:07:39 -12 2021 -I: pbuilder-time-stamp: 1630573659 +I: Current time: Fri Jul 31 16:48:09 +14 2020 +I: pbuilder-time-stamp: 1596163689 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/var/lib/jenkins/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Sat Mar 16 06:11:34 2019 -12 +gpgv: Signature made Sun Mar 17 08:11:34 2019 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -29,136 +29,170 @@ dpkg-source: info: applying unforce-cxxflags.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/14683/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/14625/tmp/hooks/D01_modify_environment starting +debug: Running on codethink-sled14-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/14625/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/14625/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.0.3(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' - DISTRIBUTION='' - HOME='/var/lib/jenkins' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/var/lib/jenkins + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='14683' - PS1='# ' - PS2='> ' + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=14625 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.kL01d6rLBc/pbuilderrc_TVwi --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.kL01d6rLBc/b1 --logfile b1/build.log libbpp-seq-omics_2.4.1-3.dsc' - SUDO_GID='117' - SUDO_UID='110' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - USERNAME='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.16:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.kL01d6rLBc/pbuilderrc_4XET --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.kL01d6rLBc/b2 --logfile b2/build.log libbpp-seq-omics_2.4.1-3.dsc' + SUDO_GID=117 + SUDO_UID=110 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + USERNAME=root + _='I: set' + http_proxy=http://192.168.101.16:3128 I: uname -a - Linux codethink-sled13-arm64 4.4.0-186-generic #216-Ubuntu SMP Wed Jul 1 05:35:21 UTC 2020 aarch64 GNU/Linux + Linux i-capture-the-hostname 4.4.0-186-generic #216-Ubuntu SMP Wed Jul 1 05:35:21 UTC 2020 aarch64 GNU/Linux I: ls -l /bin total 4928 - -rwxr-xr-x 1 root root 1216928 Apr 17 2019 bash - -rwxr-xr-x 3 root root 34808 Jul 10 2019 bunzip2 - -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzcat - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep - -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzip2 - -rwxr-xr-x 1 root root 14264 Jul 10 2019 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore - -rwxr-xr-x 1 root root 35576 Feb 28 2019 cat - -rwxr-xr-x 1 root root 60256 Feb 28 2019 chgrp - -rwxr-xr-x 1 root root 56096 Feb 28 2019 chmod - -rwxr-xr-x 1 root root 64368 Feb 28 2019 chown - -rwxr-xr-x 1 root root 134632 Feb 28 2019 cp - -rwxr-xr-x 1 root root 129536 Jan 17 2019 dash - -rwxr-xr-x 1 root root 97136 Feb 28 2019 date - -rwxr-xr-x 1 root root 76736 Feb 28 2019 dd - -rwxr-xr-x 1 root root 93752 Feb 28 2019 df - -rwxr-xr-x 1 root root 138848 Feb 28 2019 dir - -rwxr-xr-x 1 root root 75984 Jan 9 2019 dmesg - lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname - -rwxr-xr-x 1 root root 31368 Feb 28 2019 echo - -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep - -rwxr-xr-x 1 root root 27256 Feb 28 2019 false - -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep - -rwxr-xr-x 1 root root 68792 Jan 9 2019 findmnt - -rwsr-xr-x 1 root root 34824 Apr 22 2020 fusermount - -rwxr-xr-x 1 root root 174304 Jan 7 2019 grep - -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip - -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe - -rwxr-xr-x 1 root root 89656 Jan 5 2019 gzip - -rwxr-xr-x 1 root root 18440 Sep 26 2018 hostname - -rwxr-xr-x 1 root root 64472 Feb 28 2019 ln - -rwxr-xr-x 1 root root 52544 Jul 26 2018 login - -rwxr-xr-x 1 root root 138848 Feb 28 2019 ls - -rwxr-xr-x 1 root root 108552 Jan 9 2019 lsblk - -rwxr-xr-x 1 root root 76840 Feb 28 2019 mkdir - -rwxr-xr-x 1 root root 64480 Feb 28 2019 mknod - -rwxr-xr-x 1 root root 39736 Feb 28 2019 mktemp - -rwxr-xr-x 1 root root 38840 Jan 9 2019 more - -rwsr-xr-x 1 root root 47112 Jan 9 2019 mount - -rwxr-xr-x 1 root root 14344 Jan 9 2019 mountpoint - -rwxr-xr-x 1 root root 138736 Feb 28 2019 mv - lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 35560 Feb 28 2019 pwd - lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash - -rwxr-xr-x 1 root root 43712 Feb 28 2019 readlink - -rwxr-xr-x 1 root root 68440 Feb 28 2019 rm - -rwxr-xr-x 1 root root 39624 Feb 28 2019 rmdir - -rwxr-xr-x 1 root root 19144 Jan 21 2019 run-parts - -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Sep 1 02:48 sh -> dash - -rwxr-xr-x 1 root root 31384 Feb 28 2019 sleep - -rwxr-xr-x 1 root root 72480 Feb 28 2019 stty - -rwsr-xr-x 1 root root 59424 Jan 9 2019 su - -rwxr-xr-x 1 root root 31416 Feb 28 2019 sync - -rwxr-xr-x 1 root root 449416 Apr 23 2019 tar - -rwxr-xr-x 1 root root 10560 Jan 21 2019 tempfile - -rwxr-xr-x 1 root root 88968 Feb 28 2019 touch - -rwxr-xr-x 1 root root 27256 Feb 28 2019 true - -rwxr-xr-x 1 root root 14264 Apr 22 2020 ulockmgr_server - -rwsr-xr-x 1 root root 30728 Jan 9 2019 umount - -rwxr-xr-x 1 root root 31384 Feb 28 2019 uname - -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress - -rwxr-xr-x 1 root root 138848 Feb 28 2019 vdir - -rwxr-xr-x 1 root root 34824 Jan 9 2019 wdctl - -rwxr-xr-x 1 root root 946 Jan 21 2019 which - lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat - -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp - -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff - -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep - -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep - -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce - -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep - -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless - -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore - -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew -I: user script /srv/workspace/pbuilder/14683/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1216928 Apr 18 2019 bash + -rwxr-xr-x 3 root root 34808 Jul 11 2019 bunzip2 + -rwxr-xr-x 3 root root 34808 Jul 11 2019 bzcat + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep + -rwxr-xr-x 3 root root 34808 Jul 11 2019 bzip2 + -rwxr-xr-x 1 root root 14264 Jul 11 2019 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore + -rwxr-xr-x 1 root root 35576 Mar 1 2019 cat + -rwxr-xr-x 1 root root 60256 Mar 1 2019 chgrp + -rwxr-xr-x 1 root root 56096 Mar 1 2019 chmod + -rwxr-xr-x 1 root root 64368 Mar 1 2019 chown + -rwxr-xr-x 1 root root 134632 Mar 1 2019 cp + -rwxr-xr-x 1 root root 129536 Jan 18 2019 dash + -rwxr-xr-x 1 root root 97136 Mar 1 2019 date + -rwxr-xr-x 1 root root 76736 Mar 1 2019 dd + -rwxr-xr-x 1 root root 93752 Mar 1 2019 df + -rwxr-xr-x 1 root root 138848 Mar 1 2019 dir + -rwxr-xr-x 1 root root 75984 Jan 10 2019 dmesg + lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname + -rwxr-xr-x 1 root root 31368 Mar 1 2019 echo + -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep + -rwxr-xr-x 1 root root 27256 Mar 1 2019 false + -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep + -rwxr-xr-x 1 root root 68792 Jan 10 2019 findmnt + -rwsr-xr-x 1 root root 34824 Apr 23 09:38 fusermount + -rwxr-xr-x 1 root root 174304 Jan 8 2019 grep + -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip + -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe + -rwxr-xr-x 1 root root 89656 Jan 6 2019 gzip + -rwxr-xr-x 1 root root 18440 Sep 27 2018 hostname + -rwxr-xr-x 1 root root 64472 Mar 1 2019 ln + -rwxr-xr-x 1 root root 52544 Jul 27 2018 login + -rwxr-xr-x 1 root root 138848 Mar 1 2019 ls + -rwxr-xr-x 1 root root 108552 Jan 10 2019 lsblk + -rwxr-xr-x 1 root root 76840 Mar 1 2019 mkdir + -rwxr-xr-x 1 root root 64480 Mar 1 2019 mknod + -rwxr-xr-x 1 root root 39736 Mar 1 2019 mktemp + -rwxr-xr-x 1 root root 38840 Jan 10 2019 more + -rwsr-xr-x 1 root root 47112 Jan 10 2019 mount + -rwxr-xr-x 1 root root 14344 Jan 10 2019 mountpoint + -rwxr-xr-x 1 root root 138736 Mar 1 2019 mv + lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 35560 Mar 1 2019 pwd + lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash + -rwxr-xr-x 1 root root 43712 Mar 1 2019 readlink + -rwxr-xr-x 1 root root 68440 Mar 1 2019 rm + -rwxr-xr-x 1 root root 39624 Mar 1 2019 rmdir + -rwxr-xr-x 1 root root 19144 Jan 22 2019 run-parts + -rwxr-xr-x 1 root root 114016 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jul 31 16:48 sh -> bash + lrwxrwxrwx 1 root root 4 Jul 30 22:25 sh.distrib -> dash + -rwxr-xr-x 1 root root 31384 Mar 1 2019 sleep + -rwxr-xr-x 1 root root 72480 Mar 1 2019 stty + -rwsr-xr-x 1 root root 59424 Jan 10 2019 su + -rwxr-xr-x 1 root root 31416 Mar 1 2019 sync + -rwxr-xr-x 1 root root 449416 Apr 24 2019 tar + -rwxr-xr-x 1 root root 10560 Jan 22 2019 tempfile + -rwxr-xr-x 1 root root 88968 Mar 1 2019 touch + -rwxr-xr-x 1 root root 27256 Mar 1 2019 true + -rwxr-xr-x 1 root root 14264 Apr 23 09:38 ulockmgr_server + -rwsr-xr-x 1 root root 30728 Jan 10 2019 umount + -rwxr-xr-x 1 root root 31384 Mar 1 2019 uname + -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress + -rwxr-xr-x 1 root root 138848 Mar 1 2019 vdir + -rwxr-xr-x 1 root root 34824 Jan 10 2019 wdctl + -rwxr-xr-x 1 root root 946 Jan 22 2019 which + lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat + -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp + -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff + -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep + -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep + -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce + -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep + -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless + -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore + -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew +I: user script /srv/workspace/pbuilder/14625/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -263,7 +297,7 @@ Get: 61 http://deb.debian.org/debian buster/main arm64 libbpp-core-dev arm64 2.4.1-3 [920 kB] Get: 62 http://deb.debian.org/debian buster/main arm64 libbpp-seq12 arm64 2.4.1-3 [470 kB] Get: 63 http://deb.debian.org/debian buster/main arm64 libbpp-seq-dev arm64 2.4.1-3 [750 kB] -Fetched 30.0 MB in 12s (2476 kB/s) +Fetched 30.0 MB in 7s (4389 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19168 files and directories currently installed.) @@ -539,7 +573,7 @@ fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/libbpp-seq-omics-2.4.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b +I: Running cd /build/libbpp-seq-omics-2.4.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package libbpp-seq-omics dpkg-buildpackage: info: source version 2.4.1-3 dpkg-buildpackage: info: source distribution unstable @@ -594,33 +628,33 @@ make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libbpp-seq-omics-2.4.1 /build/libbpp-seq-omics-2.4.1/src /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src/CMakeFiles/bpp-seq-omics-static.dir/DependInfo.cmake --color= Scanning dependencies of target bpp-seq-omics-shared -Scanning dependencies of target bpp-seq-omics-static -make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' make -f src/CMakeFiles/bpp-seq-omics-shared.dir/build.make src/CMakeFiles/bpp-seq-omics-shared.dir/build -make -f src/CMakeFiles/bpp-seq-omics-static.dir/build.make src/CMakeFiles/bpp-seq-omics-static.dir/build +Scanning dependencies of target bpp-seq-omics-static make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' +make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' +make -f src/CMakeFiles/bpp-seq-omics-static.dir/build.make src/CMakeFiles/bpp-seq-omics-static.dir/build make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' -[ 4%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp.o -[ 4%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o -[ 4%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o -[ 4%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp.o -[ 6%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o +[ 1%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o +[ 2%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp +[ 3%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o +[ 4%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp +[ 6%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp.o +[ 7%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp +[ 8%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/SequenceFeature.cpp -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp -[ 7%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp -[ 8%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o [ 9%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/SequenceFeature.cpp -[ 10%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/SequenceFeatureTools.cpp -[ 12%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o +[ 10%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/SequenceFeatureTools.cpp +[ 12%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Feature/SequenceFeatureTools.cpp [ 13%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Fastq.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Fastq.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Fastq.cpp [ 14%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Fastq.cpp.o @@ -637,10 +671,10 @@ cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp [ 21%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp -[ 23%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp -[ 24%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp.o +[ 23%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp +[ 24%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp [ 25%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.cpp [ 26%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.cpp.o @@ -649,108 +683,108 @@ cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.cpp [ 29%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.cpp -[ 30%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp -[ 31%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp -[ 32%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp.o +[ 30%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp -[ 34%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp.o +[ 31%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp +[ 32%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp +[ 34%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp [ 35%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. 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src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.cpp -[ 39%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp.o +[ 37%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp +[ 39%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp [ 40%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/FullGapFilterMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ 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src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/IterationListener.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/IterationListener.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/IterationListener.cpp -[ 43%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/IterationListener.cpp.o +[ 42%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/IterationListener.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/IterationListener.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/IterationListener.cpp -[ 45%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MafIterator.cpp -[ 46%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafIterator.cpp.o +[ 43%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/IterationListener.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 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/usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafParser.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MafParser.cpp -[ 48%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafParser.cpp.o +[ 46%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MafIterator.cpp +[ 47%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafParser.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafParser.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MafParser.cpp -[ 50%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafSequence.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafSequence.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MafSequence.cpp -[ 51%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafSequence.cpp.o +[ 48%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafParser.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafParser.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MafParser.cpp +[ 50%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafSequence.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafSequence.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MafSequence.cpp -[ 52%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MafStatistics.cpp -[ 53%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o +[ 51%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafSequence.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafSequence.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MafSequence.cpp +[ 52%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MafStatistics.cpp +[ 53%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MafStatistics.cpp [ 54%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp [ 56%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp -[ 57%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat 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src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp -[ 60%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp.o +[ 58%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.cpp +[ 59%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp -[ 62%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OrderFilterMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 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src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OrderFilterMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OrderFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/OrderFilterMafIterator.cpp -[ 64%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o 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/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp -[ 67%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp -[ 68%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp.o +[ 65%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp +[ 67%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS 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CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp +[ 69%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OutputMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/OutputMafIterator.cpp -[ 71%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp -[ 73%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o +[ 70%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp -[ 74%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp -[ 75%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o +[ 71%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OutputMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/OutputMafIterator.cpp +[ 73%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp +[ 74%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp -[ 76%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp -[ 78%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o +[ 75%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp -[ 79%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp -[ 80%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp -[ 81%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o +[ 76%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp +[ 78%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp +[ 79%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp -[ 82%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o +[ 80%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp +[ 81%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp +[ 82%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp [ 84%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp [ 85%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp -[ 86%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o +[ 86%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp +[ 87%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o +[ 89%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp -[ 87%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o +[ 90%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp -[ 89%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp.o +[ 91%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp -[ 90%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp -[ 91%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp [ 92%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp.o -c /build/libbpp-seq-omics-2.4.1/src/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp [ 93%] Linking CXX static library libbpp-seq-omics.a @@ -767,20 +801,20 @@ make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' [ 95%] Built target bpp-seq-omics-shared make -f test/CMakeFiles/test_gff.dir/build.make test/CMakeFiles/test_gff.dir/depend -make -f test/CMakeFiles/test_fastq.dir/build.make test/CMakeFiles/test_fastq.dir/depend make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libbpp-seq-omics-2.4.1 /build/libbpp-seq-omics-2.4.1/test /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/test /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/test/CMakeFiles/test_gff.dir/DependInfo.cmake --color= +make -f test/CMakeFiles/test_fastq.dir/build.make test/CMakeFiles/test_fastq.dir/depend make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libbpp-seq-omics-2.4.1 /build/libbpp-seq-omics-2.4.1/test /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/test /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/test/CMakeFiles/test_fastq.dir/DependInfo.cmake --color= -Scanning dependencies of target test_fastq Scanning dependencies of target test_gff make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' -make -f test/CMakeFiles/test_fastq.dir/build.make test/CMakeFiles/test_fastq.dir/build -make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' make -f test/CMakeFiles/test_gff.dir/build.make test/CMakeFiles/test_gff.dir/build make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' +Scanning dependencies of target test_fastq +make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' +make -f test/CMakeFiles/test_fastq.dir/build.make test/CMakeFiles/test_fastq.dir/build make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' -[ 97%] Building CXX object test/CMakeFiles/test_fastq.dir/test_fastq.cpp.o +[ 96%] Building CXX object test/CMakeFiles/test_fastq.dir/test_fastq.cpp.o [ 97%] Building CXX object test/CMakeFiles/test_gff.dir/test_gff.cpp.o cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/test && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -o CMakeFiles/test_fastq.dir/test_fastq.cpp.o -c /build/libbpp-seq-omics-2.4.1/test/test_fastq.cpp cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/test && /usr/bin/c++ -I/build/libbpp-seq-omics-2.4.1/src -g -O2 -ffile-prefix-map=/build/libbpp-seq-omics-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -o CMakeFiles/test_gff.dir/test_gff.cpp.o -c /build/libbpp-seq-omics-2.4.1/test/test_gff.cpp @@ -805,12 +839,12 @@ Test project /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu Start 1: test_fastq Start 2: test_gff -1/2 Test #1: test_fastq ....................... Passed 0.01 sec -2/2 Test #2: test_gff ......................... Passed 0.01 sec +1/2 Test #1: test_fastq ....................... Passed 0.03 sec +2/2 Test #2: test_gff ......................... Passed 0.03 sec 100% tests passed, 0 tests failed out of 2 -Total Test time (real) = 0.01 sec +Total Test time (real) = 0.04 sec make[1]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary @@ -827,38 +861,38 @@ make -f src/CMakeFiles/bpp-seq-omics-shared.dir/build.make src/CMakeFiles/bpp-seq-omics-shared.dir/depend make -f src/CMakeFiles/bpp-seq-omics-static.dir/build.make src/CMakeFiles/bpp-seq-omics-static.dir/depend make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' +cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libbpp-seq-omics-2.4.1 /build/libbpp-seq-omics-2.4.1/src /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src/CMakeFiles/bpp-seq-omics-shared.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libbpp-seq-omics-2.4.1 /build/libbpp-seq-omics-2.4.1/src /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src/CMakeFiles/bpp-seq-omics-static.dir/DependInfo.cmake --color= -cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libbpp-seq-omics-2.4.1 /build/libbpp-seq-omics-2.4.1/src /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/src/CMakeFiles/bpp-seq-omics-shared.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' -make -f src/CMakeFiles/bpp-seq-omics-shared.dir/build.make src/CMakeFiles/bpp-seq-omics-shared.dir/build make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' make -f src/CMakeFiles/bpp-seq-omics-static.dir/build.make src/CMakeFiles/bpp-seq-omics-static.dir/build -make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' -make[3]: Nothing to be done for 'src/CMakeFiles/bpp-seq-omics-shared.dir/build'. make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' +make -f src/CMakeFiles/bpp-seq-omics-shared.dir/build.make src/CMakeFiles/bpp-seq-omics-shared.dir/build make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'src/CMakeFiles/bpp-seq-omics-static.dir/build'. make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' -[ 47%] Built target bpp-seq-omics-shared +make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' +make[3]: Nothing to be done for 'src/CMakeFiles/bpp-seq-omics-shared.dir/build'. +make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' +[ 47%] Built target bpp-seq-omics-static +[ 95%] Built target bpp-seq-omics-shared make -f test/CMakeFiles/test_gff.dir/build.make test/CMakeFiles/test_gff.dir/depend make -f test/CMakeFiles/test_fastq.dir/build.make test/CMakeFiles/test_fastq.dir/depend -[ 95%] Built target bpp-seq-omics-static -make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libbpp-seq-omics-2.4.1 /build/libbpp-seq-omics-2.4.1/test /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/test /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/test/CMakeFiles/test_gff.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' cd /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libbpp-seq-omics-2.4.1 /build/libbpp-seq-omics-2.4.1/test /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/test /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/test/CMakeFiles/test_fastq.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' make -f test/CMakeFiles/test_gff.dir/build.make test/CMakeFiles/test_gff.dir/build -make -f test/CMakeFiles/test_fastq.dir/build.make test/CMakeFiles/test_fastq.dir/build -make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' -make[3]: Nothing to be done for 'test/CMakeFiles/test_fastq.dir/build'. make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'test/CMakeFiles/test_gff.dir/build'. make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' -[100%] Built target test_gff +make -f test/CMakeFiles/test_fastq.dir/build.make test/CMakeFiles/test_fastq.dir/build +make[3]: Entering directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' +make[3]: Nothing to be done for 'test/CMakeFiles/test_fastq.dir/build'. +make[3]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' +[ 97%] Built target test_gff [100%] Built target test_fastq make[2]: Leaving directory '/build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/libbpp-seq-omics-2.4.1/obj-aarch64-linux-gnu/CMakeFiles 0 @@ -971,21 +1005,23 @@ dpkg-gencontrol: warning: package libbpp-seq-omics-dev: substitution variable ${devlibs:Depends} unused, but is defined dh_md5sums dh_builddeb -dpkg-deb: building package 'libbpp-seq-omics3-dbgsym' in '../libbpp-seq-omics3-dbgsym_2.4.1-3_arm64.deb'. dpkg-deb: building package 'libbpp-seq-omics-dev' in '../libbpp-seq-omics-dev_2.4.1-3_arm64.deb'. dpkg-deb: building package 'libbpp-seq-omics3' in '../libbpp-seq-omics3_2.4.1-3_arm64.deb'. +dpkg-deb: building package 'libbpp-seq-omics3-dbgsym' in '../libbpp-seq-omics3-dbgsym_2.4.1-3_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libbpp-seq-omics_2.4.1-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration +I: user script /srv/workspace/pbuilder/14625/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/14625/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/14683 and its subdirectories -I: Current time: Wed Sep 1 21:10:55 -12 2021 -I: pbuilder-time-stamp: 1630573855 +I: removing directory /srv/workspace/pbuilder/14625 and its subdirectories +I: Current time: Fri Jul 31 17:02:40 +14 2020 +I: pbuilder-time-stamp: 1596164560