Diff of the two buildlogs: -- --- b1/build.log 2024-03-15 09:02:04.632222756 +0000 +++ b2/build.log 2024-03-15 09:07:46.355158429 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Mar 14 20:52:31 -12 2024 -I: pbuilder-time-stamp: 1710492751 +I: Current time: Fri Apr 18 05:25:06 +14 2025 +I: pbuilder-time-stamp: 1744903506 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -18,8 +18,8 @@ I: copying [./python-cogent_2020.12.21a+dfsg-4+deb11u1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.3UeayRsI/trustedkeys.kbx': General error -gpgv: Signature made Tue Dec 12 23:42:39 2023 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.b6M8PTIU/trustedkeys.kbx': General error +gpgv: Signature made Thu Dec 14 01:42:39 2023 +14 gpgv: using RSA key D54C3BFAFFB042DE382DA5D741CE7F0B9F1B8B32 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./python-cogent_2020.12.21a+dfsg-4+deb11u1.dsc @@ -33,137 +33,168 @@ dpkg-source: info: applying skip-parallel-tests-on-single-cpu-systems.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2222/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3055/tmp/hooks/D01_modify_environment starting +debug: Running on ionos16-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 18 05:25 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3055/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3055/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='160e2b9a566745dfb7849a90e57c0792' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2222' - PS1='# ' - PS2='> ' + INVOCATION_ID=e04445db18e747ecb630bf6783858793 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3055 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XGC1kYob/pbuilderrc_WSgN --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XGC1kYob/b1 --logfile b1/build.log python-cogent_2020.12.21a+dfsg-4+deb11u1.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XGC1kYob/pbuilderrc_2ouM --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XGC1kYob/b2 --logfile b2/build.log python-cogent_2020.12.21a+dfsg-4+deb11u1.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos2-i386 6.1.0-18-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.76-1 (2024-02-01) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-18-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.76-1 (2024-02-01) x86_64 GNU/Linux I: ls -l /bin total 5772 - -rwxr-xr-x 1 root root 1367848 Mar 27 2022 bash - -rwxr-xr-x 3 root root 38280 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 17768 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 38824 Sep 22 2020 cat - -rwxr-xr-x 1 root root 71624 Sep 22 2020 chgrp - -rwxr-xr-x 1 root root 67528 Sep 22 2020 chmod - -rwxr-xr-x 1 root root 75752 Sep 22 2020 chown - -rwxr-xr-x 1 root root 157960 Sep 22 2020 cp - -rwxr-xr-x 1 root root 128724 Dec 10 2020 dash - -rwxr-xr-x 1 root root 124904 Sep 22 2020 date - -rwxr-xr-x 1 root root 92172 Sep 22 2020 dd - -rwxr-xr-x 1 root root 100752 Sep 22 2020 df - -rwxr-xr-x 1 root root 153964 Sep 22 2020 dir - -rwxr-xr-x 1 root root 83644 Jan 20 2022 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 34664 Sep 22 2020 echo - -rwxr-xr-x 1 root root 28 Jan 24 2023 egrep - -rwxr-xr-x 1 root root 34664 Sep 22 2020 false - -rwxr-xr-x 1 root root 28 Jan 24 2023 fgrep - -rwxr-xr-x 1 root root 71928 Jan 20 2022 findmnt - -rwsr-xr-x 1 root root 30112 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 210488 Jan 24 2023 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 100952 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 21916 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 83980 Sep 22 2020 ln - -rwxr-xr-x 1 root root 55572 Feb 7 2020 login - -rwxr-xr-x 1 root root 153964 Sep 22 2020 ls - -rwxr-xr-x 1 root root 153124 Jan 20 2022 lsblk - -rwxr-xr-x 1 root root 96328 Sep 22 2020 mkdir - -rwxr-xr-x 1 root root 79912 Sep 22 2020 mknod - -rwxr-xr-x 1 root root 47048 Sep 22 2020 mktemp - -rwxr-xr-x 1 root root 58920 Jan 20 2022 more - -rwsr-xr-x 1 root root 50720 Jan 20 2022 mount - -rwxr-xr-x 1 root root 13856 Jan 20 2022 mountpoint - -rwxr-xr-x 1 root root 157996 Sep 22 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 38824 Sep 22 2020 pwd - lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash - -rwxr-xr-x 1 root root 46984 Sep 22 2020 readlink - -rwxr-xr-x 1 root root 75720 Sep 22 2020 rm - -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir - -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Mar 6 21:24 sh -> dash - -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep - -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty - -rwsr-xr-x 1 root root 79396 Jan 20 2022 su - -rwxr-xr-x 1 root root 34696 Sep 22 2020 sync - -rwxr-xr-x 1 root root 598488 Jan 19 21:59 tar - -rwxr-xr-x 1 root root 13860 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 108520 Sep 22 2020 touch - -rwxr-xr-x 1 root root 34664 Sep 22 2020 true - -rwxr-xr-x 1 root root 17768 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 30236 Jan 20 2022 umount - -rwxr-xr-x 1 root root 34664 Sep 22 2020 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 153964 Sep 22 2020 vdir - -rwxr-xr-x 1 root root 63024 Jan 20 2022 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 5898 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8049 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/2222/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1367848 Mar 28 2022 bash + -rwxr-xr-x 3 root root 38280 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 38280 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 38280 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 17768 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 38824 Sep 23 2020 cat + -rwxr-xr-x 1 root root 71624 Sep 23 2020 chgrp + -rwxr-xr-x 1 root root 67528 Sep 23 2020 chmod + -rwxr-xr-x 1 root root 75752 Sep 23 2020 chown + -rwxr-xr-x 1 root root 157960 Sep 23 2020 cp + -rwxr-xr-x 1 root root 128724 Dec 11 2020 dash + -rwxr-xr-x 1 root root 124904 Sep 23 2020 date + -rwxr-xr-x 1 root root 92172 Sep 23 2020 dd + -rwxr-xr-x 1 root root 100752 Sep 23 2020 df + -rwxr-xr-x 1 root root 153964 Sep 23 2020 dir + -rwxr-xr-x 1 root root 83644 Jan 21 2022 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 34664 Sep 23 2020 echo + -rwxr-xr-x 1 root root 28 Jan 25 2023 egrep + -rwxr-xr-x 1 root root 34664 Sep 23 2020 false + -rwxr-xr-x 1 root root 28 Jan 25 2023 fgrep + -rwxr-xr-x 1 root root 71928 Jan 21 2022 findmnt + -rwsr-xr-x 1 root root 30112 Feb 27 2021 fusermount + -rwxr-xr-x 1 root root 210488 Jan 25 2023 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 100952 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 21916 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 83980 Sep 23 2020 ln + -rwxr-xr-x 1 root root 55572 Feb 8 2020 login + -rwxr-xr-x 1 root root 153964 Sep 23 2020 ls + -rwxr-xr-x 1 root root 153124 Jan 21 2022 lsblk + -rwxr-xr-x 1 root root 96328 Sep 23 2020 mkdir + -rwxr-xr-x 1 root root 79912 Sep 23 2020 mknod + -rwxr-xr-x 1 root root 47048 Sep 23 2020 mktemp + -rwxr-xr-x 1 root root 58920 Jan 21 2022 more + -rwsr-xr-x 1 root root 50720 Jan 21 2022 mount + -rwxr-xr-x 1 root root 13856 Jan 21 2022 mountpoint + -rwxr-xr-x 1 root root 157996 Sep 23 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Dec 17 2021 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 38824 Sep 23 2020 pwd + lrwxrwxrwx 1 root root 4 Mar 28 2022 rbash -> bash + -rwxr-xr-x 1 root root 46984 Sep 23 2020 readlink + -rwxr-xr-x 1 root root 75720 Sep 23 2020 rm + -rwxr-xr-x 1 root root 46984 Sep 23 2020 rmdir + -rwxr-xr-x 1 root root 22292 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 125036 Dec 23 2018 sed + lrwxrwxrwx 1 root root 9 Apr 18 05:25 sh -> /bin/bash + -rwxr-xr-x 1 root root 34696 Sep 23 2020 sleep + -rwxr-xr-x 1 root root 83880 Sep 23 2020 stty + -rwsr-xr-x 1 root root 79396 Jan 21 2022 su + -rwxr-xr-x 1 root root 34696 Sep 23 2020 sync + -rwxr-xr-x 1 root root 598488 Jan 20 2024 tar + -rwxr-xr-x 1 root root 13860 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 108520 Sep 23 2020 touch + -rwxr-xr-x 1 root root 34664 Sep 23 2020 true + -rwxr-xr-x 1 root root 17768 Feb 27 2021 ulockmgr_server + -rwsr-xr-x 1 root root 30236 Jan 21 2022 umount + -rwxr-xr-x 1 root root 34664 Sep 23 2020 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 153964 Sep 23 2020 vdir + -rwxr-xr-x 1 root root 63024 Jan 21 2022 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/3055/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -415,7 +446,7 @@ Get: 176 http://deb.debian.org/debian bullseye/main i386 python3-sphinxcontrib.bibtex all 1.0.0-1 [15.5 kB] Get: 177 http://deb.debian.org/debian bullseye/main i386 python3-tinydb all 3.15.2-2 [20.6 kB] Get: 178 http://deb.debian.org/debian bullseye/main i386 python3-tqdm all 4.57.0-2 [93.2 kB] -Fetched 130 MB in 3s (45.9 MB/s) +Fetched 130 MB in 4s (37.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19731 files and directories currently installed.) @@ -1173,7 +1204,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/python-cogent-2020.12.21a+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-cogent_2020.12.21a+dfsg-4+deb11u1_source.changes +I: user script /srv/workspace/pbuilder/3055/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/3055/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-cogent-2020.12.21a+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-cogent_2020.12.21a+dfsg-4+deb11u1_source.changes dpkg-buildpackage: info: source package python-cogent dpkg-buildpackage: info: source version 2020.12.21a+dfsg-4+deb11u1 dpkg-buildpackage: info: source distribution bullseye @@ -1192,7 +1227,7 @@ 'build/scripts-3.9' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean -make[1]: Entering directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg' +make[1]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg“ wird betreten #These files are rebuilt on-the-fly for f in `find -name '*.c'` ; do \ head -n 1 "$f" | grep -q '^/\* Generated by Cython' && rm "$f" ; \ @@ -1200,7 +1235,7 @@ rm -rf build build-stamp rm -rf doc/_build dh_clean -make[1]: Leaving directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg' +make[1]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg“ wird verlassen debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild @@ -1211,7 +1246,7 @@ warnings.warn(tmpl.format(**locals())) running config debian/rules override_dh_auto_build -make[1]: Entering directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg' +make[1]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg“ wird betreten dh_auto_build I: pybuild base:232: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:461: UserWarning: Normalizing '2020.12.21a' to '2020.12.21a0' @@ -1220,187 +1255,189 @@ running build_py creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3 copying src/cogent3/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3 -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -copying src/cogent3/align/indel_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -copying src/cogent3/align/indel_positions.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -copying src/cogent3/align/align.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -copying src/cogent3/align/traceback.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -copying src/cogent3/align/dp_calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -copying src/cogent3/align/progressive.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -copying src/cogent3/align/pairwise.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -copying src/cogent3/align/pairwise_pogs_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -copying src/cogent3/align/pycompare.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -copying src/cogent3/align/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -copying src/cogent3/align/pairwise_seqs_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -copying src/cogent3/align/compare_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster -copying src/cogent3/cluster/UPGMA.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster -copying src/cogent3/cluster/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/sequence.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/table.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/blast_xml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/gff.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/phylip.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/gcg.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/clustal.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/dialign.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/tree_xml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/record.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/ebi.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/jaspar.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/record_finder.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/cogent3_json.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/ncbi_taxonomy.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/paml_matrix.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/unigene.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/blast.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/psl.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/cigar.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/nexus.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/rdb.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/gbseq.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/locuslink.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/tinyseq.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/paml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/cisbp.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/newick.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/fasta.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/greengenes.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/parse/genbank.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/solved_models_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/substitution_calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/substitution_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/best_likelihood.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/motif_prob_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/bootstrap.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/simulate.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/likelihood_tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/pairwise_distance_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/ns_substitution_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/likelihood_calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/predicate.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/fast_distance.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/parameter_controller.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/likelihood_function.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/likelihood_tree_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/discrete_markov.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/distance.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/models.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/coevolution.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/evolve/solved_models.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format -copying src/cogent3/format/alignment.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format -copying src/cogent3/format/fasta.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format -copying src/cogent3/format/bedgraph.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format -copying src/cogent3/format/gde.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format -copying src/cogent3/format/clustal.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format -copying src/cogent3/format/phylip.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/table.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format -copying src/cogent3/format/paml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format -copying src/cogent3/format/nexus.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/util.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format +copying src/cogent3/format/phylip.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format +copying src/cogent3/format/clustal.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format +copying src/cogent3/format/alignment.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format +copying src/cogent3/format/gde.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format +copying src/cogent3/format/nexus.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format +copying src/cogent3/format/paml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format +copying src/cogent3/format/bedgraph.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format +copying src/cogent3/format/fasta.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation +copying src/cogent3/recalculation/scope.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation +copying src/cogent3/recalculation/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation +copying src/cogent3/recalculation/setting.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation +copying src/cogent3/recalculation/definition.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation +copying src/cogent3/recalculation/calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +copying src/cogent3/util/warning.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +copying src/cogent3/util/table.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +copying src/cogent3/util/union_dict.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +copying src/cogent3/util/transform.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +copying src/cogent3/util/parallel.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +copying src/cogent3/util/dict_array.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +copying src/cogent3/util/progress_display.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +copying src/cogent3/util/misc.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +copying src/cogent3/util/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +copying src/cogent3/util/checkpointing.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +copying src/cogent3/util/deserialise.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +copying src/cogent3/util/recode_alignment.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core +copying src/cogent3/core/sequence.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core +copying src/cogent3/core/moltype.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core +copying src/cogent3/core/alignment.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core +copying src/cogent3/core/annotation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core +copying src/cogent3/core/tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core +copying src/cogent3/core/location.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core +copying src/cogent3/core/alphabet.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core +copying src/cogent3/core/profile.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core +copying src/cogent3/core/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core +copying src/cogent3/core/info.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core +copying src/cogent3/core/genetic_code.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app +copying src/cogent3/app/io.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app +copying src/cogent3/app/result.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app +copying src/cogent3/app/composable.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app +copying src/cogent3/app/align.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app +copying src/cogent3/app/data_store.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app +copying src/cogent3/app/dist.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app +copying src/cogent3/app/translate.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app +copying src/cogent3/app/sample.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app +copying src/cogent3/app/tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app +copying src/cogent3/app/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app +copying src/cogent3/app/evo.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo +copying src/cogent3/phylo/util.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/tree_space.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/nj.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo -copying src/cogent3/phylo/maximum_likelihood.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo -copying src/cogent3/phylo/least_squares.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo -copying src/cogent3/phylo/util.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/consensus.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo +copying src/cogent3/phylo/maximum_likelihood.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo +copying src/cogent3/phylo/least_squares.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/tree_collection.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align +copying src/cogent3/align/progressive.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align +copying src/cogent3/align/pairwise.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align +copying src/cogent3/align/align.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align +copying src/cogent3/align/pairwise_pogs_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align +copying src/cogent3/align/traceback.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align +copying src/cogent3/align/dp_calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align +copying src/cogent3/align/pycompare.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align +copying src/cogent3/align/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align +copying src/cogent3/align/indel_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align +copying src/cogent3/align/compare_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align +copying src/cogent3/align/pairwise_seqs_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align +copying src/cogent3/align/indel_positions.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data +copying src/cogent3/data/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data copying src/cogent3/data/energy_params.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data copying src/cogent3/data/molecular_weight.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data -copying src/cogent3/data/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster +copying src/cogent3/cluster/UPGMA.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster +copying src/cogent3/cluster/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw -copying src/cogent3/draw/logo.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw -copying src/cogent3/draw/dendrogram.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw -copying src/cogent3/draw/drawable.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw copying src/cogent3/draw/dotplot.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw -copying src/cogent3/draw/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw +copying src/cogent3/draw/dendrogram.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw copying src/cogent3/draw/letter.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation -copying src/cogent3/recalculation/definition.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation -copying src/cogent3/recalculation/setting.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation -copying src/cogent3/recalculation/calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation -copying src/cogent3/recalculation/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation -copying src/cogent3/recalculation/scope.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/bootstrap.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/pairwise_distance_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/motif_prob_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/predicate.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/solved_models_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/coevolution.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/likelihood_calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/best_likelihood.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/substitution_calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/ns_substitution_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/discrete_markov.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/fast_distance.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/simulate.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/substitution_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/parameter_controller.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/distance.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/likelihood_tree_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/likelihood_tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/solved_models.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/likelihood_function.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve -copying src/cogent3/evolve/models.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve +copying src/cogent3/draw/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw +copying src/cogent3/draw/drawable.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw +copying src/cogent3/draw/logo.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths -copying src/cogent3/maths/scipy_optimisers.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths -copying src/cogent3/maths/markov.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths -copying src/cogent3/maths/optimisers.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths +copying src/cogent3/maths/matrix_logarithm.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths +copying src/cogent3/maths/util.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/solve.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths -copying src/cogent3/maths/measure.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths -copying src/cogent3/maths/matrix_exponentiation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths +copying src/cogent3/maths/markov.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths +copying src/cogent3/maths/matrix_exponential_integration.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths +copying src/cogent3/maths/scipy_optimisers.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/simannealingoptimiser.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths -copying src/cogent3/maths/period.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths -copying src/cogent3/maths/distance_transform.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/scipy_optimize.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths -copying src/cogent3/maths/matrix_logarithm.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths -copying src/cogent3/maths/matrix_exponential_integration.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths -copying src/cogent3/maths/util.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths -copying src/cogent3/maths/geometry.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/period_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core -copying src/cogent3/core/alignment.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core -copying src/cogent3/core/location.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core -copying src/cogent3/core/profile.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core -copying src/cogent3/core/alphabet.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core -copying src/cogent3/core/annotation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core -copying src/cogent3/core/sequence.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core -copying src/cogent3/core/genetic_code.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core -copying src/cogent3/core/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core -copying src/cogent3/core/info.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core -copying src/cogent3/core/tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core -copying src/cogent3/core/moltype.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app -copying src/cogent3/app/data_store.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app -copying src/cogent3/app/evo.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app -copying src/cogent3/app/align.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app -copying src/cogent3/app/io.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app -copying src/cogent3/app/composable.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app -copying src/cogent3/app/result.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app -copying src/cogent3/app/sample.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app -copying src/cogent3/app/translate.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app -copying src/cogent3/app/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app -copying src/cogent3/app/dist.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app -copying src/cogent3/app/tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -copying src/cogent3/util/deserialise.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -copying src/cogent3/util/parallel.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -copying src/cogent3/util/progress_display.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -copying src/cogent3/util/table.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -copying src/cogent3/util/warning.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -copying src/cogent3/util/recode_alignment.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -copying src/cogent3/util/dict_array.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -copying src/cogent3/util/misc.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -copying src/cogent3/util/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -copying src/cogent3/util/union_dict.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -copying src/cogent3/util/checkpointing.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -copying src/cogent3/util/transform.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/record_finder.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/blast.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/cisbp.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/unigene.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/genbank.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/newick.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/ebi.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/fasta.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/paml_matrix.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/locuslink.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/cigar.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/tree_xml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/ncbi_taxonomy.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/record.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/gcg.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/cogent3_json.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/gff.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/jaspar.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/clustal.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/phylip.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/dialign.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/table.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/paml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/tinyseq.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/gbseq.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/psl.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/sequence.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/nexus.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/greengenes.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/blast_xml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse -copying src/cogent3/parse/rdb.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse +copying src/cogent3/maths/geometry.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths +copying src/cogent3/maths/period.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths +copying src/cogent3/maths/measure.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths +copying src/cogent3/maths/matrix_exponentiation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths +copying src/cogent3/maths/optimisers.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths +copying src/cogent3/maths/distance_transform.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats -copying src/cogent3/maths/stats/kendall.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats -copying src/cogent3/maths/stats/ks.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/information_criteria.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats +copying src/cogent3/maths/stats/ks.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats +copying src/cogent3/maths/stats/number.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats +copying src/cogent3/maths/stats/test.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/special.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats +copying src/cogent3/maths/stats/contingency.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats +copying src/cogent3/maths/stats/kendall.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats +copying src/cogent3/maths/stats/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats +copying src/cogent3/maths/stats/jackknife.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/period.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/distribution.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats -copying src/cogent3/maths/stats/test.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats -copying src/cogent3/maths/stats/jackknife.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats -copying src/cogent3/maths/stats/number.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats -copying src/cogent3/maths/stats/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats -copying src/cogent3/maths/stats/contingency.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats set -x; cd doc; PYTHONPATH=/build/reproducible-path/python-cogent-2020.12.21a+dfsg http_proxy='127.0.0.1:9' /usr/bin/make html + cd doc -+ PYTHONPATH=/build/reproducible-path/python-cogent-2020.12.21a+dfsg http_proxy=127.0.0.1:9 /usr/bin/make html -make[2]: Entering directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg/doc' ++ PYTHONPATH=/build/reproducible-path/python-cogent-2020.12.21a+dfsg ++ http_proxy=127.0.0.1:9 ++ /usr/bin/make html +make[2]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg/doc“ wird betreten sphinx-build -b html -d _build/doctrees . _build/html Running Sphinx v3.4.3 making output directory... done @@ -8626,14 +8663,14 @@ Build finished. The HTML pages are in _build/html. rm -rf draw/ -make[2]: Leaving directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg/doc' +make[2]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg/doc“ wird verlassen # remove superfluous files and dirs find doc/_build -name "*.doctree*" -delete rm -f doc/_build/html/_sources/COGENT_LICENSE.txt rm -f doc/_build/html/_static/jquery.js rm -f doc/_build/html/_static/underscore.js rm -rf doc/_build/html/_images/math/ -make[1]: Leaving directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg' +make[1]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg“ wird verlassen dh_auto_test -O--buildsystem=pybuild I: pybuild pybuild:284: cp -r /build/reproducible-path/python-cogent-2020.12.21a+dfsg/tests/data /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build I: pybuild base:232: cd /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build; python3.9 -m pytest -k 'not test_pickleable_member_roundtrip and not test_pickleable_roundtrip' @@ -8773,7 +8810,7 @@ .pybuild/cpython3_3.9_cogent3/build/tests/test_phylo.py: 67 warnings .pybuild/cpython3_3.9_cogent3/build/tests/test_align/test_align.py: 184 warnings .pybuild/cpython3_3.9_cogent3/build/tests/test_app/test_align.py: 251 warnings -.pybuild/cpython3_3.9_cogent3/build/tests/test_app/test_composable.py: 305 warnings +.pybuild/cpython3_3.9_cogent3/build/tests/test_app/test_composable.py: 320 warnings .pybuild/cpython3_3.9_cogent3/build/tests/test_app/test_dist.py: 83 warnings .pybuild/cpython3_3.9_cogent3/build/tests/test_app/test_evo.py: 271 warnings .pybuild/cpython3_3.9_cogent3/build/tests/test_app/test_io.py: 43 warnings @@ -8886,7 +8923,7 @@ d = d.astype(d_type) -- Docs: https://docs.pytest.org/en/stable/warnings.html -=== 2537 passed, 6 skipped, 5 deselected, 6217 warnings in 419.54s (0:06:59) === +=== 2537 passed, 6 skipped, 5 deselected, 6232 warnings in 242.83s (0:04:02) === create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild @@ -8904,591 +8941,591 @@ creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9 creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/fastq.txt -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/c_elegans_WS199_shortened_gff.gff3 -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/Homo_sapiens_codon_usage.pri -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.aln -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/sample.tsv -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/primates_brca1.fasta -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/annotated_seq.gb -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/primates_brca1.tree -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/bowtie_output.map -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/brca1_5.paml -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/Homo_sapiens_codon_usage.pri -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/c_elegans_WS199_dna_shortened.fasta -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/annotated_seq.gb -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/test.sff -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/ENSG00000198712.fa -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/nexus_dna.nex -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/gff2_test.gff -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.fasta -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/brca1_5.paml -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/interleaved.phylip -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/site-het-param-rules.json -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/F6AVWTA01.sff -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.msf -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/primate_brca1.fasta -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.paml -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/scitrack.log -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/1LJO.pdb -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/murphy.tree -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/nexus_comments.nex -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/sample.jaspar -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.fasta.gz -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/2E12.pdb -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.phylip -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/brca1.fasta -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/1A1X.pdb -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/brca1_5.250.paml -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/brca1_5.tree -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/test.sff -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/long_testseqs.tree -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/brca1_5.250.paml -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/1LJO.pdb -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/nexus_mixed.nex -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/test.psl -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/2E12.pdb -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/primate_brca1.tree -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.paml -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/primates_brca1.fasta -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/M0926_1.02.txt -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/sample.tsv -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/gff2_test.gff -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/nexus_dna.nex -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.fasta.bz2 -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/primates_brca1.tree -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/scitrack.log -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/F6AVWTA01.sff -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/nexus_comments.nex -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/long_testseqs.fasta -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.fasta -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/primate_brca1.tree -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/ENSG00000198712.fa -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/fastq.txt -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/test.psl -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.gde -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/c_elegans_WS199_shortened_gff.gff3 -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/nexus_mixed.nex -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/nexus_aa.nxs -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/1A1X.pdb -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.msf -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/primate_brca1.fasta -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/murphy.tree -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/brca1.fasta -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/sample.jaspar -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.fasta.gz -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/formattest.aln -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/data/M0926_1.02.txt -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/data creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3 -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/indel_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/indel_positions.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/align.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/traceback.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/dp_calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/traceback.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise_seqs_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise_pogs_numba.calc_rows-18.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise_seqs_numba.calc_rows-17.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/indel_positions.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise_seqs_numba.calc_rows-17.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise_pogs_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/indel_model.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/compare_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise_pogs_numba.calc_rows-18.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/align.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/dp_calculation.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pycompare.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/progressive.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/progressive.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/pairwise.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/pairwise_pogs_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/pycompare.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/pairwise_seqs_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/compare_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster/UPGMA.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster/__pycache__/UPGMA.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/sequence.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/table.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/blast_xml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/gff.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/phylip.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/gcg.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/clustal.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/dialign.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/tree_xml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/record.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/ebi.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/jaspar.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/record_finder.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/cogent3_json.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/ncbi_taxonomy.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/paml_matrix.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/unigene.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/blast.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/psl.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/cigar.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/nexus.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/rdb.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/gbseq.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/locuslink.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/tinyseq.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/paml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/cisbp.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/paml.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/sequence.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/cisbp.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/phylip.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/nexus.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/greengenes.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/psl.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/paml_matrix.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/blast.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/unigene.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/gff.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/gbseq.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/jaspar.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/cigar.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/tree.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/record.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/fasta.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/newick.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/locuslink.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/table.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/cogent3_json.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/genbank.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/record_finder.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/dialign.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/rdb.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/gcg.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/ebi.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/ncbi_taxonomy.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/tinyseq.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/blast_xml.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/clustal.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/tree_xml.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/newick.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/fasta.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/greengenes.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/genbank.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/solved_models_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/substitution_calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/substitution_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/best_likelihood.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/motif_prob_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/bootstrap.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/simulate.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/likelihood_tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/pairwise_distance_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/ns_substitution_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/likelihood_calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/predicate.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/fast_distance.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/parameter_controller.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/likelihood_function.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/likelihood_tree_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/discrete_markov.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/best_likelihood.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.get_log_sum_across_sites-45.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/fast_distance.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/solved_models_numba.calc_TN93_P-18.py39.2.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/solved_models_numba.calc_TN93_P-18.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/motif_prob_model.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/coevolution.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.sum_input_likelihoods-16.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.sum_input_likelihoods-16.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/discrete_markov.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/simulate.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/solved_models_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_function.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/distance.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/solved_models_numba.calc_TN93_P-18.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/pairwise_distance_numba.fill_diversity_matrix-15.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/parameter_controller.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.get_log_sum_across_sites-45.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.sum_input_likelihoods-16.py39.3.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/substitution_model.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/pairwise_distance_numba.fill_diversity_matrix-15.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/predicate.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_calculation.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/pairwise_distance_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/models.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/bootstrap.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/solved_models.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.sum_input_likelihoods-16.py39.2.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/substitution_calculation.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/ns_substitution_model.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/distance.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/models.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/coevolution.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/solved_models.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/table.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/util.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/phylip.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/clustal.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/alignment.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/fasta.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/bedgraph.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/gde.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/nexus.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/paml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/util.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/gde.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/paml.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/fasta.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/clustal.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/util.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/alignment.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/phylip.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/gde.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/nexus.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/bedgraph.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/alignment.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/nexus.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/fasta.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/table.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/gde.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/clustal.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/phylip.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/table.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/paml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/nexus.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/util.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/__pycache__/clustal.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/bedgraph.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format/fasta.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/scope.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/setting.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/__pycache__/setting.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/__pycache__/calculation.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/__pycache__/scope.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/__pycache__/definition.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/definition.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/warning.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/table.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/union_dict.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/transform.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/parallel.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/dict_array.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/progress_display.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/misc.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/checkpointing.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/deserialise.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/dict_array.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/warning.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/union_dict.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/recode_alignment.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/misc.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/table.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/deserialise.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/checkpointing.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/transform.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/progress_display.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/parallel.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/recode_alignment.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/sequence.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/moltype.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/alignment.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/annotation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/location.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/alphabet.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/profile.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/sequence.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/alignment.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/annotation.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/alphabet.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/location.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/profile.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/moltype.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/tree.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/info.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/genetic_code.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/info.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/genetic_code.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/io.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/result.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/composable.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/align.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/data_store.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/dist.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/translate.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/sample.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/translate.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/evo.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/align.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/dist.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/sample.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/io.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/composable.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/tree.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/data_store.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/result.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/evo.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/util.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/tree_space.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/nj.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/maximum_likelihood.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/consensus.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/util.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/tree_space.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/least_squares.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/maximum_likelihood.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/tree_collection.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/consensus.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/nj.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/tree_collection.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/maximum_likelihood.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/least_squares.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/nj.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__pycache__/tree_space.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/maximum_likelihood.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/least_squares.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/util.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/consensus.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo/tree_collection.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3 +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/progressive.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/pairwise.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/align.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/pairwise_pogs_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/traceback.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/dp_calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/pycompare.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/indel_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/compare_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/pairwise_seqs_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/indel_model.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/traceback.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise_pogs_numba.calc_rows-18.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/align.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/compare_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise_pogs_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise_seqs_numba.calc_rows-17.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/indel_positions.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise_seqs_numba.calc_rows-17.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise_seqs_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pairwise_pogs_numba.calc_rows-18.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/pycompare.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/dp_calculation.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/__pycache__/progressive.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align/indel_positions.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data/energy_params.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data/__pycache__/molecular_weight.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data/energy_params.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data/molecular_weight.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster/UPGMA.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster/__pycache__/UPGMA.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster/__pycache__ +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/__pycache__ creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/logo.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/dotplot.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/dendrogram.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/letter.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/__pycache__/letter.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/__pycache__/drawable.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/__pycache__/dotplot.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/__pycache__/drawable.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/__pycache__/letter.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/__pycache__/dendrogram.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/__pycache__/logo.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/dendrogram.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/__pycache__/dendrogram.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/drawable.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/dotplot.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/letter.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/__pycache__ -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/definition.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/setting.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/__pycache__/scope.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/__pycache__/setting.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/__pycache__/definition.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/__pycache__/calculation.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation/scope.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/bootstrap.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/pairwise_distance_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/motif_prob_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/predicate.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/solved_models_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/coevolution.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/likelihood_calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/best_likelihood.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/substitution_calculation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/distance.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/discrete_markov.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.get_log_sum_across_sites-45.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/solved_models_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/solved_models_numba.calc_TN93_P-18.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/parameter_controller.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/solved_models_numba.calc_TN93_P-18.py39.2.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_calculation.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/substitution_model.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.sum_input_likelihoods-16.py39.2.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.sum_input_likelihoods-16.py39.3.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/pairwise_distance_numba.fill_diversity_matrix-15.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/predicate.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/coevolution.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/fast_distance.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.sum_input_likelihoods-16.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/solved_models.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/pairwise_distance_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/best_likelihood.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/motif_prob_model.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_function.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/solved_models_numba.calc_TN93_P-18.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.sum_input_likelihoods-16.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/models.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/substitution_calculation.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/pairwise_distance_numba.fill_diversity_matrix-15.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree_numba.get_log_sum_across_sites-45.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/likelihood_tree.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/ns_substitution_model.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/bootstrap.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__pycache__/simulate.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/ns_substitution_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/discrete_markov.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/fast_distance.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/simulate.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/substitution_model.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/parameter_controller.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/distance.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/likelihood_tree_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/likelihood_tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/solved_models.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/likelihood_function.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve/models.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw/logo.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/scipy_optimisers.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/markov.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/optimisers.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/matrix_logarithm.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/util.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/information_criteria.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/ks.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/number.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/test.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/special.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/contingency.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/kendall.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/jackknife.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/period.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats +creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/period.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/number.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/special.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/information_criteria.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/kendall.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/contingency.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/ks.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/jackknife.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/distribution.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/test.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/distribution.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/solve.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/markov.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/matrix_exponential_integration.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/scipy_optimisers.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/simannealingoptimiser.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/scipy_optimize.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/period_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/geometry.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/period.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/measure.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/matrix_exponentiation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/optimisers.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period_numba.autocorr_inner-52.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/matrix_exponentiation.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/util.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/distance_transform.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period_numba.ipdft_inner-32.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/matrix_exponential_integration.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period_numba.autocorr_inner-52.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/optimisers.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/distance_transform.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/markov.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period_numba.ipdft_inner-32.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/matrix_logarithm.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/geometry.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/solve.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/simannealingoptimiser.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/measure.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/scipy_optimize.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/matrix_exponentiation.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period_numba.autocorr_inner-52.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period_numba.ipdft_inner-32.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/scipy_optimisers.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period_numba.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/geometry.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period_numba.goertzel_inner-17.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period_numba.autocorr_inner-52.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period_numba.goertzel_inner-17.py39.1.nbc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/simannealingoptimiser.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/kendall.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/ks.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/distribution.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/kendall.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/contingency.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/test.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/special.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/information_criteria.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/jackknife.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/ks.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/number.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__pycache__/period.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/information_criteria.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/special.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/period.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/distribution.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/test.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/jackknife.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/number.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats/contingency.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/period.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/simannealingoptimiser.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/solve.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/period_numba.ipdft_inner-32.py39.nbi -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/matrix_logarithm.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ +copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__pycache__/measure.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__pycache__ copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/distance_transform.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/scipy_optimize.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/matrix_logarithm.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/matrix_exponential_integration.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/util.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/geometry.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/period_numba.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/alignment.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/location.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/profile.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/alphabet.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/location.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/genetic_code.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/info.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/tree.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/profile.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/alphabet.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/sequence.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/moltype.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/alignment.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__pycache__/annotation.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/annotation.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/sequence.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/genetic_code.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/info.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core/moltype.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/data_store.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/evo.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/align.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/io.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/evo.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/tree.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/composable.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/sample.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/io.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/result.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/data_store.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/translate.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/align.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__pycache__/dist.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/composable.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/result.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/sample.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/translate.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/dist.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app/tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3 -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/checkpointing.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/parallel.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/union_dict.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/deserialise.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/recode_alignment.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/warning.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/dict_array.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/transform.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/misc.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/progress_display.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__pycache__/table.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/deserialise.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/parallel.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/progress_display.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/table.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/warning.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/recode_alignment.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/dict_array.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/misc.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/union_dict.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/checkpointing.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util/transform.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/record_finder.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/blast.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/cisbp.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/unigene.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/genbank.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/newick.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/ebi.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/fasta.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/paml_matrix.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/locuslink.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/cigar.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/tree_xml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/ncbi_taxonomy.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/record.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/gcg.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -creating /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/paml.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/cisbp.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/tree.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/fasta.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/tinyseq.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/blast.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/clustal.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/jaspar.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/dialign.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/locuslink.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/record_finder.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/ebi.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/cogent3_json.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/paml_matrix.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/record.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/rdb.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/cigar.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/unigene.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/gcg.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/phylip.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/gff.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/sequence.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/tree_xml.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/nexus.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/ncbi_taxonomy.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/gbseq.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/blast_xml.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/greengenes.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/newick.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/genbank.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/table.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__pycache__/psl.cpython-39.pyc -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__pycache__ -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/cogent3_json.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/gff.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/jaspar.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/clustal.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/phylip.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/dialign.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/table.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/paml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/tinyseq.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/gbseq.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/psl.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/sequence.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/nexus.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/__init__.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/greengenes.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/blast_xml.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/tree.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -copying /build/reproducible-path/python-cogent-2020.12.21a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse/rdb.py -> /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/indel_model.py to indel_model.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/indel_positions.py to indel_positions.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/align.py to align.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/traceback.py to traceback.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/dp_calculation.py to dp_calculation.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/progressive.py to progressive.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/pairwise.py to pairwise.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/pairwise_pogs_numba.py to pairwise_pogs_numba.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/pycompare.py to pycompare.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/pairwise_seqs_numba.py to pairwise_seqs_numba.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/compare_numba.py to compare_numba.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster/UPGMA.py to UPGMA.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/alignment.py to alignment.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/fasta.py to fasta.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/bedgraph.py to bedgraph.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/gde.py to gde.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/clustal.py to clustal.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/phylip.py to phylip.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/sequence.py to sequence.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/table.py to table.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/blast_xml.py to blast_xml.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/gff.py to gff.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/phylip.py to phylip.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/gcg.py to gcg.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/clustal.py to clustal.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/dialign.py to dialign.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/tree_xml.py to tree_xml.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/record.py to record.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/ebi.py to ebi.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/jaspar.py to jaspar.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/record_finder.py to record_finder.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/cogent3_json.py to cogent3_json.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/ncbi_taxonomy.py to ncbi_taxonomy.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/paml_matrix.py to paml_matrix.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/unigene.py to unigene.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/blast.py to blast.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/psl.py to psl.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/tree.py to tree.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/cigar.py to cigar.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/nexus.py to nexus.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/rdb.py to rdb.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/gbseq.py to gbseq.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/locuslink.py to locuslink.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/tinyseq.py to tinyseq.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/paml.py to paml.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/cisbp.py to cisbp.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/newick.py to newick.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/fasta.py to fasta.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/greengenes.py to greengenes.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/genbank.py to genbank.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/solved_models_numba.py to solved_models_numba.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/substitution_calculation.py to substitution_calculation.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/substitution_model.py to substitution_model.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/best_likelihood.py to best_likelihood.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/motif_prob_model.py to motif_prob_model.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/bootstrap.py to bootstrap.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/simulate.py to simulate.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/likelihood_tree.py to likelihood_tree.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/pairwise_distance_numba.py to pairwise_distance_numba.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/ns_substitution_model.py to ns_substitution_model.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/likelihood_calculation.py to likelihood_calculation.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/predicate.py to predicate.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/fast_distance.py to fast_distance.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/parameter_controller.py to parameter_controller.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/likelihood_function.py to likelihood_function.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/likelihood_tree_numba.py to likelihood_tree_numba.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/discrete_markov.py to discrete_markov.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/distance.py to distance.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/models.py to models.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/coevolution.py to coevolution.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/solved_models.py to solved_models.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/table.py to table.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/paml.py to paml.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/nexus.py to nexus.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/util.py to util.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/phylip.py to phylip.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/clustal.py to clustal.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/alignment.py to alignment.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/gde.py to gde.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/nexus.py to nexus.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/paml.py to paml.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/bedgraph.py to bedgraph.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/format/fasta.py to fasta.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/scope.py to scope.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/setting.py to setting.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/definition.py to definition.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/calculation.py to calculation.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/warning.py to warning.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/table.py to table.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/union_dict.py to union_dict.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/transform.py to transform.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/parallel.py to parallel.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/dict_array.py to dict_array.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/progress_display.py to progress_display.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/misc.py to misc.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/checkpointing.py to checkpointing.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/deserialise.py to deserialise.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/recode_alignment.py to recode_alignment.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/sequence.py to sequence.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/moltype.py to moltype.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/alignment.py to alignment.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/annotation.py to annotation.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/tree.py to tree.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/location.py to location.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/alphabet.py to alphabet.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/profile.py to profile.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/info.py to info.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/genetic_code.py to genetic_code.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/io.py to io.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/result.py to result.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/composable.py to composable.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/align.py to align.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/data_store.py to data_store.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/dist.py to dist.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/translate.py to translate.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/sample.py to sample.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/tree.py to tree.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/evo.py to evo.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/util.py to util.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/tree_space.py to tree_space.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/nj.py to nj.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/maximum_likelihood.py to maximum_likelihood.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/least_squares.py to least_squares.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/util.py to util.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/consensus.py to consensus.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/maximum_likelihood.py to maximum_likelihood.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/least_squares.py to least_squares.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/phylo/tree_collection.py to tree_collection.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/progressive.py to progressive.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/pairwise.py to pairwise.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/align.py to align.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/pairwise_pogs_numba.py to pairwise_pogs_numba.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/traceback.py to traceback.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/dp_calculation.py to dp_calculation.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/pycompare.py to pycompare.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/indel_model.py to indel_model.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/compare_numba.py to compare_numba.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/pairwise_seqs_numba.py to pairwise_seqs_numba.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/align/indel_positions.py to indel_positions.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data/energy_params.py to energy_params.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data/molecular_weight.py to molecular_weight.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/data/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/logo.py to logo.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/dendrogram.py to dendrogram.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/drawable.py to drawable.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster/UPGMA.py to UPGMA.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/cluster/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/dotplot.py to dotplot.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/dendrogram.py to dendrogram.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/letter.py to letter.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/definition.py to definition.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/setting.py to setting.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/calculation.py to calculation.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/recalculation/scope.py to scope.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/bootstrap.py to bootstrap.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/pairwise_distance_numba.py to pairwise_distance_numba.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/motif_prob_model.py to motif_prob_model.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/predicate.py to predicate.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/solved_models_numba.py to solved_models_numba.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/coevolution.py to coevolution.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/likelihood_calculation.py to likelihood_calculation.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/best_likelihood.py to best_likelihood.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/substitution_calculation.py to substitution_calculation.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/ns_substitution_model.py to ns_substitution_model.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/discrete_markov.py to discrete_markov.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/fast_distance.py to fast_distance.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/simulate.py to simulate.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/substitution_model.py to substitution_model.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/parameter_controller.py to parameter_controller.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/distance.py to distance.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/likelihood_tree_numba.py to likelihood_tree_numba.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/likelihood_tree.py to likelihood_tree.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/solved_models.py to solved_models.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/likelihood_function.py to likelihood_function.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/evolve/models.py to models.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/scipy_optimisers.py to scipy_optimisers.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/markov.py to markov.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/optimisers.py to optimisers.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/solve.py to solve.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/measure.py to measure.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/matrix_exponentiation.py to matrix_exponentiation.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/simannealingoptimiser.py to simannealingoptimiser.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/kendall.py to kendall.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/ks.py to ks.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/drawable.py to drawable.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/draw/logo.py to logo.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/matrix_logarithm.py to matrix_logarithm.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/util.py to util.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/information_criteria.py to information_criteria.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/ks.py to ks.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/number.py to number.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/test.py to test.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/special.py to special.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/contingency.py to contingency.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/kendall.py to kendall.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/jackknife.py to jackknife.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/period.py to period.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/distribution.py to distribution.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/test.py to test.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/jackknife.py to jackknife.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/number.py to number.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/stats/contingency.py to contingency.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/period.py to period.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/distance_transform.py to distance_transform.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/scipy_optimize.py to scipy_optimize.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/matrix_logarithm.py to matrix_logarithm.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/solve.py to solve.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/markov.py to markov.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/matrix_exponential_integration.py to matrix_exponential_integration.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/util.py to util.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/geometry.py to geometry.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/scipy_optimisers.py to scipy_optimisers.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/simannealingoptimiser.py to simannealingoptimiser.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/scipy_optimize.py to scipy_optimize.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/period_numba.py to period_numba.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/alignment.py to alignment.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/location.py to location.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/profile.py to profile.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/alphabet.py to alphabet.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/annotation.py to annotation.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/sequence.py to sequence.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/genetic_code.py to genetic_code.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/info.py to info.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/tree.py to tree.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/core/moltype.py to moltype.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/data_store.py to data_store.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/evo.py to evo.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/align.py to align.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/io.py to io.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/composable.py to composable.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/result.py to result.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/sample.py to sample.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/translate.py to translate.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/dist.py to dist.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/app/tree.py to tree.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/deserialise.py to deserialise.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/parallel.py to parallel.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/progress_display.py to progress_display.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/table.py to table.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/warning.py to warning.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/recode_alignment.py to recode_alignment.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/dict_array.py to dict_array.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/misc.py to misc.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/union_dict.py to union_dict.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/checkpointing.py to checkpointing.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/util/transform.py to transform.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/record_finder.py to record_finder.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/blast.py to blast.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/cisbp.py to cisbp.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/unigene.py to unigene.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/genbank.py to genbank.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/newick.py to newick.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/ebi.py to ebi.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/fasta.py to fasta.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/paml_matrix.py to paml_matrix.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/locuslink.py to locuslink.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/cigar.py to cigar.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/tree_xml.py to tree_xml.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/ncbi_taxonomy.py to ncbi_taxonomy.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/record.py to record.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/gcg.py to gcg.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/cogent3_json.py to cogent3_json.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/gff.py to gff.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/jaspar.py to jaspar.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/clustal.py to clustal.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/phylip.py to phylip.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/dialign.py to dialign.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/table.py to table.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/paml.py to paml.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/tinyseq.py to tinyseq.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/gbseq.py to gbseq.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/psl.py to psl.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/sequence.py to sequence.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/nexus.py to nexus.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/greengenes.py to greengenes.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/blast_xml.py to blast_xml.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/tree.py to tree.cpython-39.pyc -byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/parse/rdb.py to rdb.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/geometry.py to geometry.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/period.py to period.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/measure.py to measure.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/matrix_exponentiation.py to matrix_exponentiation.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/optimisers.py to optimisers.cpython-39.pyc +byte-compiling /build/reproducible-path/python-cogent-2020.12.21a+dfsg/debian/python3-cogent3/usr/lib/python3.9/dist-packages/cogent3/maths/distance_transform.py to distance_transform.cpython-39.pyc running install_egg_info running egg_info creating src/cogent3.egg-info @@ -9505,43 +9542,43 @@ running install_scripts dh_install -O--buildsystem=pybuild debian/rules override_dh_installdocs -make[1]: Entering directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg' +make[1]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg“ wird betreten dh_installdocs rm -rf debian/python-cogent/usr/share/doc/python-cogent/html/_sources find debian -name doctrees -type d | xargs rm -rf -make[1]: Leaving directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg' +make[1]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg“ wird verlassen dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_python3 -make[1]: Entering directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg' +make[1]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg“ wird betreten dh_python3 --shebang=/usr/bin/python3 -make[1]: Leaving directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg' +make[1]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg“ wird verlassen dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild debian/rules override_dh_compress -make[1]: Entering directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg' +make[1]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg“ wird betreten dh_compress --exclude=.js --exclude=.fasta --exclude=.txt --exclude=.pdb -make[1]: Leaving directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg' +make[1]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg“ wird verlassen dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild debian/rules override_dh_shlibdeps -make[1]: Entering directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg' +make[1]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg“ wird betreten dh_shlibdeps dh_numpy3 -make[1]: Leaving directory '/build/reproducible-path/python-cogent-2020.12.21a+dfsg' +make[1]: Verzeichnis „/build/reproducible-path/python-cogent-2020.12.21a+dfsg“ wird verlassen dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package python3-cogent3: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: package python-cogent-doc: substitution variable ${python3:Depends} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild -dpkg-deb: building package 'python3-cogent3' in '../python3-cogent3_2020.12.21a+dfsg-4+deb11u1_i386.deb'. -dpkg-deb: building package 'python-cogent-doc' in '../python-cogent-doc_2020.12.21a+dfsg-4+deb11u1_all.deb'. +dpkg-deb: Paket »python-cogent-doc« wird in »../python-cogent-doc_2020.12.21a+dfsg-4+deb11u1_all.deb« gebaut. +dpkg-deb: Paket »python3-cogent3« wird in »../python3-cogent3_2020.12.21a+dfsg-4+deb11u1_i386.deb« gebaut. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../python-cogent_2020.12.21a+dfsg-4+deb11u1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -9549,12 +9586,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3055/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3055/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2222 and its subdirectories -I: Current time: Thu Mar 14 21:02:03 -12 2024 -I: pbuilder-time-stamp: 1710493323 +I: removing directory /srv/workspace/pbuilder/3055 and its subdirectories +I: Current time: Fri Apr 18 05:30:44 +14 2025 +I: pbuilder-time-stamp: 1744903844