Diff of the two buildlogs: -- --- b1/build.log 2021-07-08 01:05:51.344913493 +0000 +++ b2/build.log 2021-07-08 01:14:24.993710274 +0000 @@ -1,6 +1,8 @@ -I: pbuilder: network access will be disabled during build -I: Current time: Tue Aug 9 19:27:52 -12 2022 -I: pbuilder-time-stamp: 1660116472 +unshare: unshare failed: Cannot allocate memory +W: pbuilder: unshare CLONE_NEWNET not available +I: pbuilder: network access is available during build! +I: Current time: Thu Jul 8 15:05:57 +14 2021 +I: pbuilder-time-stamp: 1625706357 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,8 +19,8 @@ I: copying [./ltrsift_1.0.2-9.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.d3153m6R/trustedkeys.kbx': General error -gpgv: Signature made Sat Apr 18 00:11:46 2020 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.JzSyGkxU/trustedkeys.kbx': General error +gpgv: Signature made Sun Apr 19 02:11:46 2020 +14 gpgv: using RSA key 5B34BA5AAB5507E903426E85E8D37AE2F09F4872 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./ltrsift_1.0.2-9.dsc @@ -31,137 +33,171 @@ dpkg-source: info: applying spelling.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/12355/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/19824/tmp/hooks/D01_modify_environment starting +debug: Running on ionos2-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/19824/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/19824/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=18' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=10' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='ab7bb716086d4f3c93a63a90633c270b' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='12355' - PS1='# ' - PS2='> ' + INVOCATION_ID=f22587557ac9497e9cb4d9e278218ecc + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=19824 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.j1aw4DvneL/pbuilderrc_vFXR --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.j1aw4DvneL/b1 --logfile b1/build.log ltrsift_1.0.2-9.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.j1aw4DvneL/pbuilderrc_ibpf --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.j1aw4DvneL/b2 --logfile b2/build.log --extrapackages usrmerge ltrsift_1.0.2-9.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos6-i386 4.19.0-17-amd64 #1 SMP Debian 4.19.194-2 (2021-06-21) x86_64 GNU/Linux + Linux i-capture-the-hostname 4.19.0-17-686-pae #1 SMP Debian 4.19.194-2 (2021-06-21) i686 GNU/Linux I: ls -l /bin - total 5776 - -rwxr-xr-x 1 root root 1367848 Jun 21 2021 bash - -rwxr-xr-x 3 root root 38280 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 17768 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 38824 Sep 22 2020 cat - -rwxr-xr-x 1 root root 71624 Sep 22 2020 chgrp - -rwxr-xr-x 1 root root 67528 Sep 22 2020 chmod - -rwxr-xr-x 1 root root 75752 Sep 22 2020 chown - -rwxr-xr-x 1 root root 157960 Sep 22 2020 cp - -rwxr-xr-x 1 root root 128724 Dec 10 2020 dash - -rwxr-xr-x 1 root root 124904 Sep 22 2020 date - -rwxr-xr-x 1 root root 92172 Sep 22 2020 dd - -rwxr-xr-x 1 root root 100752 Sep 22 2020 df - -rwxr-xr-x 1 root root 153964 Sep 22 2020 dir - -rwxr-xr-x 1 root root 83644 Feb 7 2021 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 34664 Sep 22 2020 echo - -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep - -rwxr-xr-x 1 root root 34664 Sep 22 2020 false - -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep - -rwxr-xr-x 1 root root 71928 Feb 7 2021 findmnt - -rwsr-xr-x 1 root root 30112 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 210488 Nov 9 2020 grep - -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip - -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe - -rwxr-xr-x 1 root root 100952 Mar 2 2021 gzip - -rwxr-xr-x 1 root root 21916 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 83980 Sep 22 2020 ln - -rwxr-xr-x 1 root root 55572 Feb 7 2020 login - -rwxr-xr-x 1 root root 153964 Sep 22 2020 ls - -rwxr-xr-x 1 root root 153124 Feb 7 2021 lsblk - -rwxr-xr-x 1 root root 96328 Sep 22 2020 mkdir - -rwxr-xr-x 1 root root 79912 Sep 22 2020 mknod - -rwxr-xr-x 1 root root 47048 Sep 22 2020 mktemp - -rwxr-xr-x 1 root root 58920 Feb 7 2021 more - -rwsr-xr-x 1 root root 50720 Feb 7 2021 mount - -rwxr-xr-x 1 root root 13856 Feb 7 2021 mountpoint - -rwxr-xr-x 1 root root 157996 Sep 22 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 38824 Sep 22 2020 pwd - lrwxrwxrwx 1 root root 4 Jun 21 2021 rbash -> bash - -rwxr-xr-x 1 root root 46984 Sep 22 2020 readlink - -rwxr-xr-x 1 root root 75720 Sep 22 2020 rm - -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir - -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Aug 9 03:47 sh -> dash - -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep - -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty - -rwsr-xr-x 1 root root 79396 Feb 7 2021 su - -rwxr-xr-x 1 root root 34696 Sep 22 2020 sync - -rwxr-xr-x 1 root root 602584 Feb 16 2021 tar - -rwxr-xr-x 1 root root 13860 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 108520 Sep 22 2020 touch - -rwxr-xr-x 1 root root 34664 Sep 22 2020 true - -rwxr-xr-x 1 root root 17768 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 30236 Feb 7 2021 umount - -rwxr-xr-x 1 root root 34664 Sep 22 2020 uname - -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress - -rwxr-xr-x 1 root root 153964 Sep 22 2020 vdir - -rwxr-xr-x 1 root root 63024 Feb 7 2021 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat - -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp - -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff - -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep - -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep - -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce - -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep - -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless - -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore - -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew -I: user script /srv/workspace/pbuilder/12355/tmp/hooks/D02_print_environment finished + total 5784 + -rwxr-xr-x 1 root root 1367848 Jun 22 16:25 bash + -rwxr-xr-x 3 root root 38280 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 38280 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 38280 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 17768 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 38824 Sep 23 2020 cat + -rwxr-xr-x 1 root root 71624 Sep 23 2020 chgrp + -rwxr-xr-x 1 root root 67528 Sep 23 2020 chmod + -rwxr-xr-x 1 root root 75752 Sep 23 2020 chown + -rwxr-xr-x 1 root root 157960 Sep 23 2020 cp + -rwxr-xr-x 1 root root 128724 Dec 11 2020 dash + -rwxr-xr-x 1 root root 124904 Sep 23 2020 date + -rwxr-xr-x 1 root root 92172 Sep 23 2020 dd + -rwxr-xr-x 1 root root 100752 Sep 23 2020 df + -rwxr-xr-x 1 root root 153964 Sep 23 2020 dir + -rwxr-xr-x 1 root root 83644 Feb 8 04:38 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 34664 Sep 23 2020 echo + -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep + -rwxr-xr-x 1 root root 34664 Sep 23 2020 false + -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep + -rwxr-xr-x 1 root root 71928 Feb 8 04:38 findmnt + -rwsr-xr-x 1 root root 30112 Feb 27 06:12 fusermount + -rwxr-xr-x 1 root root 210488 Nov 10 2020 grep + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 gunzip + -rwxr-xr-x 1 root root 6376 Mar 3 13:30 gzexe + -rwxr-xr-x 1 root root 100952 Mar 3 13:30 gzip + -rwxr-xr-x 1 root root 21916 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 83980 Sep 23 2020 ln + -rwxr-xr-x 1 root root 55572 Feb 8 2020 login + -rwxr-xr-x 1 root root 153964 Sep 23 2020 ls + -rwxr-xr-x 1 root root 153124 Feb 8 04:38 lsblk + -rwxr-xr-x 1 root root 96328 Sep 23 2020 mkdir + -rwxr-xr-x 1 root root 79912 Sep 23 2020 mknod + -rwxr-xr-x 1 root root 47048 Sep 23 2020 mktemp + -rwxr-xr-x 1 root root 58920 Feb 8 04:38 more + -rwsr-xr-x 1 root root 50720 Feb 8 04:38 mount + -rwxr-xr-x 1 root root 13856 Feb 8 04:38 mountpoint + -rwxr-xr-x 1 root root 157996 Sep 23 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 38824 Sep 23 2020 pwd + lrwxrwxrwx 1 root root 4 Jun 22 16:25 rbash -> bash + -rwxr-xr-x 1 root root 46984 Sep 23 2020 readlink + -rwxr-xr-x 1 root root 75720 Sep 23 2020 rm + -rwxr-xr-x 1 root root 46984 Sep 23 2020 rmdir + -rwxr-xr-x 1 root root 22292 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 125036 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jul 8 15:10 sh -> bash + lrwxrwxrwx 1 root root 4 Jul 5 04:20 sh.distrib -> dash + -rwxr-xr-x 1 root root 34696 Sep 23 2020 sleep + -rwxr-xr-x 1 root root 83880 Sep 23 2020 stty + -rwsr-xr-x 1 root root 79396 Feb 8 04:38 su + -rwxr-xr-x 1 root root 34696 Sep 23 2020 sync + -rwxr-xr-x 1 root root 602584 Feb 17 23:55 tar + -rwxr-xr-x 1 root root 13860 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 108520 Sep 23 2020 touch + -rwxr-xr-x 1 root root 34664 Sep 23 2020 true + -rwxr-xr-x 1 root root 17768 Feb 27 06:12 ulockmgr_server + -rwsr-xr-x 1 root root 30236 Feb 8 04:38 umount + -rwxr-xr-x 1 root root 34664 Sep 23 2020 uname + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 uncompress + -rwxr-xr-x 1 root root 153964 Sep 23 2020 vdir + -rwxr-xr-x 1 root root 63024 Feb 8 04:38 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Mar 3 13:30 zcat + -rwxr-xr-x 1 root root 1678 Mar 3 13:30 zcmp + -rwxr-xr-x 1 root root 5880 Mar 3 13:30 zdiff + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zegrep + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zfgrep + -rwxr-xr-x 1 root root 2081 Mar 3 13:30 zforce + -rwxr-xr-x 1 root root 7585 Mar 3 13:30 zgrep + -rwxr-xr-x 1 root root 2206 Mar 3 13:30 zless + -rwxr-xr-x 1 root root 1842 Mar 3 13:30 zmore + -rwxr-xr-x 1 root root 4553 Mar 3 13:30 znew +I: user script /srv/workspace/pbuilder/19824/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -400,7 +436,7 @@ Get: 195 http://deb.debian.org/debian bullseye/main i386 libxdamage-dev i386 1:1.1.5-2 [15.8 kB] Get: 196 http://deb.debian.org/debian bullseye/main i386 libxml2-utils i386 2.9.10+dfsg-6.7 [110 kB] Get: 197 http://deb.debian.org/debian bullseye/main i386 libgtk2.0-dev i386 2.24.33-2 [827 kB] -Fetched 86.3 MB in 1s (88.1 MB/s) +Fetched 86.3 MB in 27s (3172 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19675 files and directories currently installed.) @@ -1215,9 +1251,41 @@ Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). -0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +The following additional packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl +The following NEW packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge +0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. +Need to get 59.5 kB of archives. +After this operation, 157 kB of additional disk space will be used. +Get:1 http://deb.debian.org/debian bullseye/main i386 libnumber-compare-perl all 0.03-1.1 [6956 B] +Get:2 http://deb.debian.org/debian bullseye/main i386 libtext-glob-perl all 0.11-1 [8888 B] +Get:3 http://deb.debian.org/debian bullseye/main i386 libfile-find-rule-perl all 0.34-1 [30.6 kB] +Get:4 http://deb.debian.org/debian bullseye/main i386 usrmerge all 25 [13.0 kB] +debconf: delaying package configuration, since apt-utils is not installed +Fetched 59.5 kB in 0s (855 kB/s) +Selecting previously unselected package libnumber-compare-perl. +(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 33793 files and directories currently installed.) +Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ... +Unpacking libnumber-compare-perl (0.03-1.1) ... +Selecting previously unselected package libtext-glob-perl. +Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ... +Unpacking libtext-glob-perl (0.11-1) ... +Selecting previously unselected package libfile-find-rule-perl. +Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... +Unpacking libfile-find-rule-perl (0.34-1) ... +Selecting previously unselected package usrmerge. +Preparing to unpack .../archives/usrmerge_25_all.deb ... +Unpacking usrmerge (25) ... +Setting up libtext-glob-perl (0.11-1) ... +Setting up libnumber-compare-perl (0.03-1.1) ... +Setting up libfile-find-rule-perl (0.34-1) ... +Setting up usrmerge (25) ... +The system has been successfully converted. +Processing triggers for man-db (2.9.4-2) ... +Not building database; man-db/auto-update is not 'true'. I: Building the package -I: Running cd /build/ltrsift-1.0.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b +I: Running cd /build/ltrsift-1.0.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package ltrsift dpkg-buildpackage: info: source version 1.0.2-9 dpkg-buildpackage: info: source distribution unstable @@ -1243,19 +1311,19 @@ debian/rules override_dh_auto_build make[1]: Entering directory '/build/ltrsift-1.0.2' dh_auto_build -- x32=no 64bit=no errorcheck=no - make -j18 "INSTALL=install --strip-program=true" x32=no 64bit=no errorcheck=no + make -j10 "INSTALL=install --strip-program=true" x32=no 64bit=no errorcheck=no make[2]: Entering directory '/build/ltrsift-1.0.2' [create bin] -[create obj] test -d bin || mkdir -p bin -test -d obj || mkdir -p obj +[create obj] [create obj/src] +test -d obj || mkdir -p obj test -d obj/src || mkdir -p obj/src [compile obj/src/default_style.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/default_style.c -o obj/src/default_style.o [compile obj/src/error.o] -cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/error.c -o obj/src/error.o [compile obj/src/gtk_blastn_params.o] +cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/error.c -o obj/src/error.o cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_blastn_params.c -o obj/src/gtk_blastn_params.o [compile obj/src/gtk_blastn_params_refseq.o] [compile obj/src/gtk_label_close.o] @@ -1264,8 +1332,8 @@ [compile obj/src/gtk_ltr_assistant.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_ltr_assistant.c -o obj/src/gtk_ltr_assistant.o [compile obj/src/gtk_ltr_families.o] -cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_ltr_families.c -o obj/src/gtk_ltr_families.o [compile obj/src/gtk_ltr_filter.o] +cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_ltr_families.c -o obj/src/gtk_ltr_families.o [compile obj/src/gtk_project_settings.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_ltr_filter.c -o obj/src/gtk_ltr_filter.o cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_project_settings.c -o obj/src/gtk_project_settings.o @@ -1277,18 +1345,6 @@ cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/preprocess_visitor.c -o obj/src/preprocess_visitor.o [compile obj/src/project_wizard.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/project_wizard.c -o obj/src/project_wizard.o -[compile obj/src/script_filter_stream.o] -cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/script_filter_stream.c -o obj/src/script_filter_stream.o -[compile obj/src/statusbar.o] -cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/statusbar.c -o obj/src/statusbar.o -[compile obj/src/support.o] -cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/support.c -o obj/src/support.o -[compile obj/src/ltrsift.o] -cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/ltrsift.c -o obj/src/ltrsift.o -[compile obj/src/ltrsift_encode.o] -cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/ltrsift_encode.c -o obj/src/ltrsift_encode.o -[linking bin/ltrsift_encode] -cc obj/src/ltrsift_encode.o -o bin/ltrsift_encode -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wl,-z,relro -Wl,-z,now -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, @@ -1299,7 +1355,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, - from src/menubar.c:20: + from src/gtk_ltr_families.c:20: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ @@ -1314,7 +1370,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/menubar.c:20: + from src/gtk_ltr_families.c:20: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ @@ -1326,19 +1382,11 @@ from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, - from src/gtk_ltr_assistant.h:24, - from src/gtk_ltr_assistant.c:20: + from src/gtk_blastn_params.h:24, + from src/gtk_blastn_params.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, - from /usr/include/glib-2.0/glib-object.h:22, - from src/gtk_ltr_assistant.h:23, - from src/gtk_ltr_assistant.c:20: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, @@ -1347,16 +1395,32 @@ from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, - from src/gtk_blastn_params_refseq.h:24, - from src/gtk_blastn_params_refseq.c:19: + from src/ltrsift.h:22, + from src/error.h:22, + from src/gtk_project_settings.c:20: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, - from src/gtk_blastn_params_refseq.h:23, - from src/gtk_blastn_params_refseq.c:19: + from src/gtk_blastn_params.h:23, + from src/gtk_blastn_params.c:19: +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, + from /usr/include/glib-2.0/glib-object.h:22, + from /usr/include/glib-2.0/gio/gioenums.h:28, + from /usr/include/glib-2.0/gio/giotypes.h:28, + from /usr/include/glib-2.0/gio/gio.h:26, + from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, + from /usr/include/gtk-2.0/gdk/gdk.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:32, + from src/ltrsift.h:22, + from src/error.h:22, + from src/gtk_project_settings.c:20: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ @@ -1370,7 +1434,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_ltr_filter.c:19: + from src/error.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ @@ -1385,7 +1449,28 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_ltr_filter.c:19: + from src/error.c:19: +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ +In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, + from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, + from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, + from /usr/include/gtk-2.0/gtk/gtkbin.h:35, + from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, + from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, + from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:33, + from src/gtk_label_close.h:24, + from src/gtk_label_close.c:19: +/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] + 236 | void gtk_type_init (GTypeDebugFlags debug_flags); + | ^~~~ +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, + from /usr/include/glib-2.0/glib-object.h:22, + from src/gtk_label_close.h:23, + from src/gtk_label_close.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ @@ -1399,7 +1484,21 @@ from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_project_settings.c:20: + from src/menubar.c:20: +/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] + 236 | void gtk_type_init (GTypeDebugFlags debug_flags); + | ^~~~ +In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, + from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, + from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, + from /usr/include/gtk-2.0/gtk/gtkbin.h:35, + from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, + from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, + from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:33, + from src/ltrsift.h:22, + from src/error.h:22, + from src/gtk_ltr_filter.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ @@ -1414,23 +1513,12 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_project_settings.c:20: + from src/gtk_ltr_filter.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/ltrsift.h:22, - from src/error.h:22, - from src/menubar.c:20: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from /usr/include/glib-2.0/gobject/gbinding.h:28, +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, @@ -1441,25 +1529,9 @@ from src/ltrsift.h:22, from src/error.h:22, from src/menubar.c:20: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/gtk_ltr_assistant.h:24, - from src/gtk_ltr_assistant.c:20: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from src/gtk_ltr_assistant.h:22, - from src/gtk_ltr_assistant.c:20: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, @@ -1468,24 +1540,37 @@ from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, - from src/ltrsift.h:22, - from src/error.h:22, - from src/gtk_ltr_families.c:20: + from src/gtk_blastn_params_refseq.h:24, + from src/gtk_blastn_params_refseq.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, - from /usr/include/glib-2.0/gio/gioenums.h:28, - from /usr/include/glib-2.0/gio/giotypes.h:28, - from /usr/include/glib-2.0/gio/gio.h:26, - from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, - from /usr/include/gtk-2.0/gdk/gdk.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:32, - from src/ltrsift.h:22, - from src/error.h:22, - from src/gtk_ltr_families.c:20: + from src/gtk_blastn_params_refseq.h:23, + from src/gtk_blastn_params_refseq.c:19: +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ +In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, + from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, + from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, + from /usr/include/gtk-2.0/gtk/gtkbin.h:35, + from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, + from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, + from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:33, + from src/gtk_ltr_assistant.h:24, + from src/gtk_ltr_assistant.c:20: +/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] + 236 | void gtk_type_init (GTypeDebugFlags debug_flags); + | ^~~~ +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, + from /usr/include/glib-2.0/glib-object.h:22, + from src/gtk_ltr_assistant.h:23, + from src/gtk_ltr_assistant.c:20: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ @@ -1499,7 +1584,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, - from src/error.c:19: + from src/project_wizard.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ @@ -1514,7 +1599,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/error.c:19: + from src/project_wizard.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ @@ -1527,13 +1612,25 @@ /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from src/gtk_blastn_params_refseq.h:22, - from src/gtk_blastn_params_refseq.c:19: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/gtk_ltr_assistant.h:24, + from src/gtk_ltr_assistant.c:20: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/ltrsift.h:22, + from src/error.h:22, + from src/menubar.c:20: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, @@ -1550,6 +1647,56 @@ from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/error.h:22, + from src/error.c:19: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/ltrsift.h:22, + from src/error.h:22, + from src/gtk_ltr_families.c:20: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, + from src/gtk_blastn_params_refseq.h:22, + from src/gtk_blastn_params_refseq.c:19: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, + from src/gtk_ltr_assistant.h:22, + from src/gtk_ltr_assistant.c:20: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, + from /usr/include/glib-2.0/gobject/gbinding.h:28, + from /usr/include/glib-2.0/glib-object.h:22, + from /usr/include/glib-2.0/gio/gioenums.h:28, + from /usr/include/glib-2.0/gio/giotypes.h:28, + from /usr/include/glib-2.0/gio/gio.h:26, + from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, + from /usr/include/gtk-2.0/gdk/gdk.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:32, + from src/ltrsift.h:22, + from src/error.h:22, + from src/menubar.c:20: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/ltrsift.h:22, + from src/error.h:22, from src/gtk_project_settings.c:20: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; @@ -1566,7 +1713,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_ltr_filter.c:19: + from src/error.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ @@ -1582,26 +1729,29 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_project_settings.c:20: + from src/gtk_ltr_filter.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, - from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, - from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, - from /usr/include/gtk-2.0/gtk/gtkbin.h:35, - from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, - from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, - from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:33, +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, + from /usr/include/glib-2.0/gobject/gbinding.h:28, + from /usr/include/glib-2.0/glib-object.h:22, + from /usr/include/glib-2.0/gio/gioenums.h:28, + from /usr/include/glib-2.0/gio/giotypes.h:28, + from /usr/include/glib-2.0/gio/gio.h:26, + from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, + from /usr/include/gtk-2.0/gdk/gdk.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/project_wizard.c:19: -/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] - 236 | void gtk_type_init (GTypeDebugFlags debug_flags); - | ^~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, + from src/gtk_ltr_families.c:20: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, + from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, @@ -1611,68 +1761,39 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/project_wizard.c:19: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ -In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, - from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, - from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, - from /usr/include/gtk-2.0/gtk/gtkbin.h:35, - from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, - from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, - from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:33, + from src/gtk_project_settings.c:20: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/gtk_blastn_params.h:24, from src/gtk_blastn_params.c:19: -/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] - 236 | void gtk_type_init (GTypeDebugFlags debug_flags); - | ^~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, - from /usr/include/glib-2.0/glib-object.h:22, - from src/gtk_blastn_params.h:23, - from src/gtk_blastn_params.c:19: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ -In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, - from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, - from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, - from /usr/include/gtk-2.0/gtk/gtkbin.h:35, - from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, - from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, - from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:33, - from src/gtk_label_close.h:24, - from src/gtk_label_close.c:19: -/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] - 236 | void gtk_type_init (GTypeDebugFlags debug_flags); - | ^~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, - from /usr/include/glib-2.0/glib-object.h:22, - from src/gtk_label_close.h:23, - from src/gtk_label_close.c:19: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ -In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, - from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, - from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, - from /usr/include/gtk-2.0/gtk/gtkbin.h:35, - from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, - from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, - from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:33, +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, - from src/statusbar.h:22, - from src/statusbar.c:20: -/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] - 236 | void gtk_type_init (GTypeDebugFlags debug_flags); - | ^~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, + from src/error.h:22, + from src/project_wizard.c:19: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, + from src/gtk_blastn_params.h:22, + from src/gtk_blastn_params.c:19: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, + from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, @@ -1681,29 +1802,31 @@ from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, - from src/statusbar.h:22, - from src/statusbar.c:20: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ -src/menubar.c: In function 'first_save_and_reload': -src/menubar.c:875:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 875 | if (!g_thread_create(save_and_reload_data_start, (gpointer) threaddata, - | ^~ -In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, - from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, - from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, - from /usr/include/gtk-2.0/gtk/gtkbin.h:35, - from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, - from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, - from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:33, - from src/ltrsift.h:22, from src/error.h:22, - from src/ltrsift.c:19: -/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] - 236 | void gtk_type_init (GTypeDebugFlags debug_flags); - | ^~~~ + from src/project_wizard.c:19: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/gtk_label_close.h:24, + from src/gtk_label_close.c:19: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, + from src/gtk_label_close.h:22, + from src/gtk_label_close.c:19: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +src/project_wizard.c: In function 'project_wizard_apply': +src/project_wizard.c:292:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 292 | if (!g_thread_create(project_wizard_start_job, (gpointer) threaddata, FALSE, + | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, @@ -1715,12 +1838,16 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/menubar.c:20: + from src/project_wizard.c:19: /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, +src/menubar.c: In function 'first_save_and_reload': +src/menubar.c:875:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 875 | if (!g_thread_create(save_and_reload_data_start, (gpointer) threaddata, + | ^~ +In file included from /usr/include/glib-2.0/glib.h:111, + from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, @@ -1730,10 +1857,10 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/ltrsift.c:19: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ + from src/menubar.c:20: +/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here + 100 | GThread *g_thread_create (GThreadFunc func, + | ^~~~~~~~~~~~~~~ src/menubar.c: In function 'save_as_activate': src/menubar.c:962:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] 962 | if (!g_thread_create(save_as_start, (gpointer) threaddata, @@ -1772,22 +1899,31 @@ /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, - from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, - from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, - from /usr/include/gtk-2.0/gtk/gtkbin.h:35, - from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, - from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, - from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:33, +src/gtk_ltr_families.c: In function 'gtk_ltr_families_refseq_match': +src/menubar.c: In function 'open_activate': +src/gtk_ltr_families.c:1551:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 1551 | if (!g_thread_create(refseq_match_cands_start, (gpointer) threaddata, FALSE, + | ^~ +src/menubar.c:1100:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 1100 | if (!g_thread_create(open_project_data_start, (gpointer) threaddata, + | ^~ +In file included from /usr/include/glib-2.0/glib.h:111, + from /usr/include/glib-2.0/gobject/gbinding.h:28, + from /usr/include/glib-2.0/glib-object.h:22, + from /usr/include/glib-2.0/gio/gioenums.h:28, + from /usr/include/glib-2.0/gio/giotypes.h:28, + from /usr/include/glib-2.0/gio/gio.h:26, + from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, + from /usr/include/gtk-2.0/gdk/gdk.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/support.c:20: -/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] - 236 | void gtk_type_init (GTypeDebugFlags debug_flags); - | ^~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, + from src/menubar.c:20: +/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here + 100 | GThread *g_thread_create (GThreadFunc func, + | ^~~~~~~~~~~~~~~ +In file included from /usr/include/glib-2.0/glib.h:111, + from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, @@ -1797,13 +1933,13 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/support.c:20: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ -src/menubar.c: In function 'open_activate': -src/menubar.c:1100:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 1100 | if (!g_thread_create(open_project_data_start, (gpointer) threaddata, + from src/gtk_ltr_families.c:20: +/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here + 100 | GThread *g_thread_create (GThreadFunc func, + | ^~~~~~~~~~~~~~~ +src/gtk_ltr_families.c: In function 'gtk_ltr_families_orffind': +src/gtk_ltr_families.c:1648:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 1648 | if (!g_thread_create(orffind_start, (gpointer) threaddata, FALSE, | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, @@ -1816,7 +1952,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/menubar.c:20: + from src/gtk_ltr_families.c:20: /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ @@ -1839,18 +1975,11 @@ /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/ltrsift.h:22, - from src/error.h:22, - from src/gtk_ltr_families.c:20: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, +src/gtk_ltr_families.c: In function 'notebook_toolbar_search_cand_group_clicked': +src/gtk_ltr_families.c:2873:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 2873 | if (!g_thread_create(classify_nodes_start, (gpointer) threaddata, FALSE, + | ^~ +In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, @@ -1862,22 +1991,35 @@ from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_families.c:20: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, +/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here + 100 | GThread *g_thread_create (GThreadFunc func, + | ^~~~~~~~~~~~~~~ +[compile obj/src/script_filter_stream.o] +cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/script_filter_stream.c -o obj/src/script_filter_stream.o +[compile obj/src/statusbar.o] +cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/statusbar.c -o obj/src/statusbar.o +[compile obj/src/support.o] +cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/support.c -o obj/src/support.o +[compile obj/src/ltrsift.o] +cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/ltrsift.c -o obj/src/ltrsift.o +[compile obj/src/ltrsift_encode.o] +cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/ltrsift_encode.c -o obj/src/ltrsift_encode.o +In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, + from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, + from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, + from /usr/include/gtk-2.0/gtk/gtkbin.h:35, + from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, + from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, + from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, - from src/error.h:22, - from src/error.c:19: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from /usr/include/glib-2.0/gobject/gbinding.h:28, + from src/statusbar.h:22, + from src/statusbar.c:20: +/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] + 236 | void gtk_type_init (GTypeDebugFlags debug_flags); + | ^~~~ +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, @@ -1886,27 +2028,18 @@ from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, - from src/error.h:22, - from src/error.c:19: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ + from src/statusbar.h:22, + from src/statusbar.c:20: +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, - from src/error.h:22, - from src/project_wizard.c:19: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/gtk_blastn_params.h:24, - from src/gtk_blastn_params.c:19: + from src/statusbar.h:22, + from src/statusbar.c:20: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ @@ -1921,47 +2054,27 @@ from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, - from src/error.h:22, - from src/project_wizard.c:19: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from src/gtk_blastn_params.h:22, - from src/gtk_blastn_params.c:19: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/gtk_label_close.h:24, - from src/gtk_label_close.c:19: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from src/gtk_label_close.h:22, - from src/gtk_label_close.c:19: + from src/statusbar.h:22, + from src/statusbar.c:20: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, +In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, + from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, + from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, + from /usr/include/gtk-2.0/gtk/gtkbin.h:35, + from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, + from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, + from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, - from src/statusbar.h:22, - from src/statusbar.c:20: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from /usr/include/glib-2.0/gobject/gbinding.h:28, + from src/error.h:22, + from src/ltrsift.c:19: +/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] + 236 | void gtk_type_init (GTypeDebugFlags debug_flags); + | ^~~~ +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, @@ -1970,11 +2083,13 @@ from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, - from src/statusbar.h:22, - from src/statusbar.c:20: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ + from src/error.h:22, + from src/ltrsift.c:19: +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ +[linking bin/ltrsift_encode] +cc obj/src/ltrsift_encode.o -o bin/ltrsift_encode -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wl,-z,relro -Wl,-z,now -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, @@ -2001,19 +2116,22 @@ /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, +In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, + from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, + from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, + from /usr/include/gtk-2.0/gtk/gtkbin.h:35, + from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, + from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, + from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, from src/support.c:20: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from /usr/include/glib-2.0/gobject/gbinding.h:28, +/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] + 236 | void gtk_type_init (GTypeDebugFlags debug_flags); + | ^~~~ +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, @@ -2024,9 +2142,9 @@ from src/ltrsift.h:22, from src/error.h:22, from src/support.c:20: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ src/ltrsift.c: In function 'main': src/ltrsift.c:309:13: warning: Deprecated pre-processor symbol 309 | if (!g_thread_supported()) @@ -2049,68 +2167,18 @@ /usr/include/glib-2.0/glib/deprecated/gthread.h:261:10: note: declared here 261 | void g_thread_init (gpointer vtable); | ^~~~~~~~~~~~~ -src/project_wizard.c: In function 'project_wizard_apply': -src/project_wizard.c:292:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 292 | if (!g_thread_create(project_wizard_start_job, (gpointer) threaddata, FALSE, - | ^~ -In file included from /usr/include/glib-2.0/glib.h:111, - from /usr/include/glib-2.0/gobject/gbinding.h:28, - from /usr/include/glib-2.0/glib-object.h:22, - from /usr/include/glib-2.0/gio/gioenums.h:28, - from /usr/include/glib-2.0/gio/giotypes.h:28, - from /usr/include/glib-2.0/gio/gio.h:26, - from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, - from /usr/include/gtk-2.0/gdk/gdk.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:32, - from src/ltrsift.h:22, - from src/error.h:22, - from src/project_wizard.c:19: -/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here - 100 | GThread *g_thread_create (GThreadFunc func, - | ^~~~~~~~~~~~~~~ -src/gtk_ltr_families.c: In function 'gtk_ltr_families_refseq_match': -src/gtk_ltr_families.c:1551:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 1551 | if (!g_thread_create(refseq_match_cands_start, (gpointer) threaddata, FALSE, - | ^~ -In file included from /usr/include/glib-2.0/glib.h:111, - from /usr/include/glib-2.0/gobject/gbinding.h:28, - from /usr/include/glib-2.0/glib-object.h:22, - from /usr/include/glib-2.0/gio/gioenums.h:28, - from /usr/include/glib-2.0/gio/giotypes.h:28, - from /usr/include/glib-2.0/gio/gio.h:26, - from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, - from /usr/include/gtk-2.0/gdk/gdk.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:32, - from src/ltrsift.h:22, - from src/error.h:22, - from src/gtk_ltr_families.c:20: -/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here - 100 | GThread *g_thread_create (GThreadFunc func, - | ^~~~~~~~~~~~~~~ -src/gtk_ltr_families.c: In function 'gtk_ltr_families_orffind': -src/gtk_ltr_families.c:1648:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 1648 | if (!g_thread_create(orffind_start, (gpointer) threaddata, FALSE, - | ^~ -In file included from /usr/include/glib-2.0/glib.h:111, - from /usr/include/glib-2.0/gobject/gbinding.h:28, - from /usr/include/glib-2.0/glib-object.h:22, - from /usr/include/glib-2.0/gio/gioenums.h:28, - from /usr/include/glib-2.0/gio/giotypes.h:28, - from /usr/include/glib-2.0/gio/gio.h:26, - from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, - from /usr/include/gtk-2.0/gdk/gdk.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:32, +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_ltr_families.c:20: -/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here - 100 | GThread *g_thread_create (GThreadFunc func, - | ^~~~~~~~~~~~~~~ -src/gtk_ltr_families.c: In function 'notebook_toolbar_search_cand_group_clicked': -src/gtk_ltr_families.c:2873:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 2873 | if (!g_thread_create(classify_nodes_start, (gpointer) threaddata, FALSE, - | ^~ -In file included from /usr/include/glib-2.0/glib.h:111, + from src/support.c:20: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, @@ -2121,10 +2189,10 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_ltr_families.c:20: -/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here - 100 | GThread *g_thread_create (GThreadFunc func, - | ^~~~~~~~~~~~~~~ + from src/support.c:20: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ src/gtk_ltr_assistant.c: In function 'gtk_ltr_assistant_get_match_params': src/gtk_ltr_assistant.c:853:27: warning: ' -x ' directive writing 4 bytes into a region of size between 1 and 8192 [-Wformat-overflow=] 853 | sprintf(last_call, "%s -x %d", last_call, xgapped); @@ -2373,7 +2441,7 @@ gunzip sample_data/dmel-2L-chromosome-r5.8.fasta.gz gzip -n -9 sample_data/dmel-2L-chromosome-r5.8.fasta dh_auto_install -- 64bit=no errorcheck=no prefix=/build/ltrsift-1.0.2/debian/tmp/usr - make -j18 install DESTDIR=/build/ltrsift-1.0.2/debian/ltrsift AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" 64bit=no errorcheck=no prefix=/build/ltrsift-1.0.2/debian/tmp/usr + make -j10 install DESTDIR=/build/ltrsift-1.0.2/debian/ltrsift AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" 64bit=no errorcheck=no prefix=/build/ltrsift-1.0.2/debian/tmp/usr make[2]: Entering directory '/build/ltrsift-1.0.2' test -d /build/ltrsift-1.0.2/debian/tmp/usr/bin || mkdir -p /build/ltrsift-1.0.2/debian/tmp/usr/bin cp bin/* /build/ltrsift-1.0.2/debian/tmp/usr/bin @@ -2443,20 +2511,21 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'ltrsift' in '../ltrsift_1.0.2-9_i386.deb'. dpkg-deb: building package 'ltrsift-dbgsym' in '../ltrsift-dbgsym_1.0.2-9_i386.deb'. +dpkg-deb: building package 'ltrsift' in '../ltrsift_1.0.2-9_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../ltrsift_1.0.2-9_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -I: copying local configuration +I: user script /srv/workspace/pbuilder/19824/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/19824/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/12355 and its subdirectories -I: Current time: Tue Aug 9 19:28:50 -12 2022 -I: pbuilder-time-stamp: 1660116530 +I: removing directory /srv/workspace/pbuilder/19824 and its subdirectories +I: Current time: Thu Jul 8 15:14:24 +14 2021 +I: pbuilder-time-stamp: 1625706864