Diff of the two buildlogs: -- --- b1/build.log 2024-01-12 07:33:48.085471916 +0000 +++ b2/build.log 2024-01-12 07:43:34.762892214 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Feb 13 01:51:15 -12 2025 -I: pbuilder-time-stamp: 1739454675 +I: Current time: Fri Jan 12 21:33:51 +14 2024 +I: pbuilder-time-stamp: 1705044831 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -18,7 +18,7 @@ I: copying [./liggghts_3.8.0+repack1-7.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.gQZ5tJdd/trustedkeys.kbx': General error +gpgv: keyblock resource '/tmp/dpkg-verify-sig.C2UhpbBJ/trustedkeys.kbx': General error gpgv: Signature made Fri Jun 26 21:26:37 2020 gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06 gpgv: Can't check signature: No public key @@ -30,51 +30,82 @@ dpkg-source: info: applying 01_add_cmake_files.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/46812/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/6399/tmp/hooks/D01_modify_environment starting +debug: Running on ionos12-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 12 07:34 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/6399/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/6399/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=16 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=7 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='772272f9a5834e8b9f5b7bacc570c0c1' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='46812' - PS1='# ' - PS2='> ' + INVOCATION_ID=c34bb8cbe557413b8d25697f56a8c262 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=6399 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CkAvcrMp/pbuilderrc_89xp --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CkAvcrMp/b1 --logfile b1/build.log liggghts_3.8.0+repack1-7.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CkAvcrMp/pbuilderrc_GSiV --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CkAvcrMp/b2 --logfile b2/build.log liggghts_3.8.0+repack1-7.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos16-i386 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-686-pae #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) i686 GNU/Linux I: ls -l /bin total 5776 -rwxr-xr-x 1 root root 1367848 Mar 27 2022 bash @@ -134,7 +165,7 @@ -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Feb 8 15:47 sh -> dash + lrwxrwxrwx 1 root root 9 Jan 12 07:34 sh -> /bin/bash -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty -rwsr-xr-x 1 root root 79396 Jan 20 2022 su @@ -160,7 +191,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/46812/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/6399/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -622,7 +653,7 @@ Get: 410 http://deb.debian.org/debian bullseye/main i386 libxt-dev i386 1:1.2.0-1 [421 kB] Get: 411 http://deb.debian.org/debian bullseye/main i386 libvtk6-dev i386 6.3.0+dfsg2-8.1 [1873 kB] Get: 412 http://deb.debian.org/debian bullseye/main i386 mpi-default-bin i386 1.13 [4672 B] -Fetched 255 MB in 5s (50.5 MB/s) +Fetched 255 MB in 33s (7696 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17763 files and directories currently installed.) @@ -2306,7 +2337,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../liggghts_3.8.0+repack1-7_source.changes +I: user script /srv/workspace/pbuilder/6399/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/6399/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../liggghts_3.8.0+repack1-7_source.changes dpkg-buildpackage: info: source package liggghts dpkg-buildpackage: info: source version 3.8.0+repack1-7 dpkg-buildpackage: info: source distribution unstable @@ -2447,7 +2482,7 @@ -- Build files have been written to: /build/reproducible-path/liggghts-3.8.0+repack1/debian/build dh_auto_build -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build - cd debian/build && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 + cd debian/build && make -j7 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -S/build/reproducible-path/liggghts-3.8.0+repack1 -B/build/reproducible-path/liggghts-3.8.0+repack1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/CMakeFiles /build/reproducible-path/liggghts-3.8.0+repack1/debian/build//CMakeFiles/progress.marks @@ -2480,37 +2515,19 @@ make -f src/CMakeFiles/libliggghts.dir/build.make src/CMakeFiles/libliggghts.dir/build make[3]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle.cpp.o -[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom.cpp.o [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_map.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/angle.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle.cpp [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom.cpp.o [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o [ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/angle.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom.cpp -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_map.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_map.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec.cpp -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o -[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_atomic.cpp -[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_charge.cpp -[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_ellipsoid.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_line.cpp -[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_full.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_hybrid.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_molecular.cpp -[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph_var.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sphere.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sphere_w.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:363:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 363 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -2521,6 +2538,24 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:375:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 375 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_ellipsoid.cpp +[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_full.cpp +[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_hybrid.cpp +[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_line.cpp +[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_molecular.cpp +[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph.cpp +[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph_var.cpp +[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sphere.cpp +[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sphere_w.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_superquadric.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_tri.cpp.o @@ -2533,16 +2568,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp [ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/bounding_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bounding_box.cpp -[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling.cpp -[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_file.cpp -[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_mpi.cpp -[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_regionmodel_none.cpp -[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/change_box.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/change_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/change_box.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:200:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 200 | fread(&k[1],sizeof(double),atom->nbondtypes,fp); @@ -2550,10 +2575,8 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:201:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 201 | fread(&r0[1],sizeof(double),atom->nbondtypes,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/citeme.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/citeme.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/citeme.cpp -[ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/comm.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/comm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/comm.cpp +[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:351:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 351 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -2564,6 +2587,18 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:363:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 363 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_file.cpp +[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_mpi.cpp +[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_regionmodel_none.cpp +[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/change_box.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/change_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/change_box.cpp +[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/citeme.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/citeme.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/citeme.cpp +[ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/comm.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/comm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/comm.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o @@ -2579,9 +2614,9 @@ [ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_com.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_com.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_com.cpp [ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_com_molecule.cpp [ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_contact_atom.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_com_molecule.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_contact_atom_gran.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_coord_atom.cpp.o @@ -2631,8 +2666,8 @@ [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_atom.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_local.cpp.o -[ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_property_local.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_local.cpp +[ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_molecule.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rdf.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_rdf.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_rdf.cpp @@ -2672,16 +2707,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/domain.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/domain.cpp [ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/dump.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump.cpp -[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp -[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom.cpp.o -[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtk.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp -[ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtm.cpp -[ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_decomposition_vtk.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:352:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 352 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -2692,6 +2717,16 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:364:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 364 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp +[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp +[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtk.cpp +[ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtm.cpp +[ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_decomposition_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_euler_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_image.cpp.o @@ -2736,38 +2771,38 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_euler.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp -[ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp:520:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 520 | ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ +[ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp -[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_aveforce.cpp -[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_base_liggghts.cpp -[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_box_relax.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp:848:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 848 | ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ -[ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_buoyancy.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp:670:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 670 | ftruncate(fileno(fp),fileend); + | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp: In member function 'virtual void LAMMPS_NS::FixAveSpatial::end_of_step()': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp:917:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 917 | ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ +[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_aveforce.cpp +[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_base_liggghts.cpp +[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_box_relax.cpp +[ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_buoyancy.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp:670:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 670 | ftruncate(fileno(fp),fileend); - | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_impl.cpp [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_species.cpp.o @@ -2797,15 +2832,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history.cpp [ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history_mesh.cpp -[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom.cpp -[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom_wall.cpp -[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_continuum_weighted.cpp -[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_deform.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_deform.cpp -[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp: In constructor 'LAMMPS_NS::FixCfdCouplingConvectionSpecies::FixCfdCouplingConvectionSpecies(LAMMPS_NS::LAMMPS*, int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:75:40: warning: 'Source' directive writing 6 bytes into a region of size between 1 and 128 [-Wformat-overflow=] 75 | sprintf(sourceName_, "%sSource",speciesName_); @@ -2821,7 +2847,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_deform_check.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:76:40: warning: 'Flux' directive writing 4 bytes into a region of size between 1 and 128 [-Wformat-overflow=] 76 | sprintf(convectiveFluxName_,"%sFlux",speciesName_); | ^~~~ @@ -2892,6 +2917,16 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom.cpp +[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom_wall.cpp +[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_continuum_weighted.cpp +[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_deform.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_deform.cpp +[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_deform_check.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_diam_max.cpp [ 41%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_drag.cpp.o @@ -2911,8 +2946,8 @@ [ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_gravity.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_gravity.cpp [ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o -[ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_heat_gran_conduction.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_heat_gran.cpp +[ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_heat_gran_conduction.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_heat_gran_conduction.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_heat_gran_conduction.cpp [ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_insert.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_insert.cpp @@ -3082,10 +3117,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_multisphere.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/integrate.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/integrate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/integrate.cpp -[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/irregular.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/irregular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/irregular.cpp -[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/kspace.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/kspace.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/kspace.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:340:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 340 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3103,6 +3134,10 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1170:24: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1170 | if (me == 0) system(work); | ~~~~~~^~~~~~ +[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/irregular.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/irregular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/irregular.cpp +[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/kspace.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/kspace.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/kspace.cpp [ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lammps.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/lammps.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp [ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lattice.cpp.o @@ -3145,11 +3180,20 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/domain_definitions.h:60: note: this is the location of the previous definition 60 | #define BIG 1.0e20 | -[ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/min_cg.cpp.o -[ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/min.cpp.o -[ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/min_linesearch.cpp.o +[ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/min.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/min.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/min.cpp +In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_base.h:63, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/granular_styles.h:81, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp:87: +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::SurfacesIntersectData]': +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 80 | posix_memalign(&ptr, alignment, sizeof(T)); + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::ForceData]': +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] +[ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/min_cg.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/min_cg.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/min_cg.cpp +[ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/min_linesearch.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/min_linesearch.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/min_linesearch.cpp [ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/minimize.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/minimize.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/minimize.cpp @@ -3167,21 +3211,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_bond.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_bond.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_derive.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_derive.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_derive.cpp -[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_dummy.cpp -In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_base.h:63, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/granular_styles.h:81, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp:87: -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::SurfacesIntersectData]': -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 80 | posix_memalign(&ptr, alignment, sizeof(T)); - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::ForceData]': -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] -[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_full.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_full.cpp -[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_gran.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp:1197:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1197 | if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp); @@ -3222,6 +3251,12 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp:1264:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1264 | if (me == 0) fread(&n,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ +[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_dummy.cpp +[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_full.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_full.cpp +[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_gran.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_gran.cpp [ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_bin.cpp [ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o @@ -3248,14 +3283,17 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp -[ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid_overlay.cpp -[ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_line_lj.cpp -[ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_soft.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_soft.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp -[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp: In member function 'virtual void LAMMPS_NS::PairGran::read_restart(FILE*, int, int)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp:763:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 763 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp: In member function 'virtual void LAMMPS_NS::PairGranProxy::read_restart_settings(FILE*, int, int)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:116:58: warning: format '%zd' expects argument of type 'signed size_t', but argument 3 has type 'int64_t' {aka 'long long int'} [-Wformat=] + 116 | fprintf(screen," original hashcode = %zd \n",selected); + | ~~^ ~~~~~~~~ + | | | + | int int64_t {aka long long int} + | %lld /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:660:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 660 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3266,12 +3304,19 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:677:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 677 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid_overlay.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:99:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 99 | fread(&selected, sizeof(int64_t), 1, fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_line_lj.cpp +[ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_soft.cpp.o +[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_soft.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph.cpp [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp: In member function 'virtual void LAMMPS_NS::PairGran::read_restart(FILE*, int, int)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp:763:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 763 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp:282:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 282 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); @@ -3291,13 +3336,6 @@ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp: In member function 'virtual void LAMMPS_NS::PairGranProxy::read_restart_settings(FILE*, int, int)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:116:58: warning: format '%zd' expects argument of type 'signed size_t', but argument 3 has type 'int64_t' {aka 'long long int'} [-Wformat=] - 116 | fprintf(screen," original hashcode = %zd \n",selected); - | ~~^ ~~~~~~~~ - | | | - | int int64_t {aka long long int} - | %lld [ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsertSuperquadric.cpp [ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o @@ -3313,9 +3351,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 323 | fread(&tensCorr_flag,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:99:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 99 | fread(&selected, sizeof(int64_t), 1, fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/procmap.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/procmap.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/procmap.cpp [ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/properties.cpp.o @@ -3405,16 +3440,12 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/run.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/run.cpp [ 93%] Building CXX object src/CMakeFiles/libliggghts.dir/run_time.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/run_time.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/run_time.cpp +[ 93%] Building CXX object src/CMakeFiles/libliggghts.dir/set.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/set.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/set.cpp [ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/signal_handling.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/signal_handling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp -[ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/set.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/set.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/set.cpp [ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/sort_buffer.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/sort_buffer.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/sort_buffer.cpp -[ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/special.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/special.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/special.cpp -[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/superquadric.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/superquadric.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp: In function 'void LAMMPS_NS::SignalHandler::int_handler(int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp:65:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 65 | write(STDOUT_FILENO, warning.c_str(), len); @@ -3429,6 +3460,10 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp:108:10: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 108 | write(STDOUT_FILENO, warning.c_str(), len); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/special.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/special.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/special.cpp +[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/superquadric.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/superquadric.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/tet_mesh.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/thermo.cpp.o @@ -3449,16 +3484,16 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/velocity.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/velocity.cpp [ 98%] Building CXX object src/CMakeFiles/libliggghts.dir/verlet.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/verlet.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/verlet.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/variable.cpp:534:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] + 534 | fscanf(fp,"%d",&nextindex); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 98%] Building CXX object src/CMakeFiles/libliggghts.dir/write_data.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/write_data.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/write_data.cpp [ 98%] Building CXX object src/CMakeFiles/libliggghts.dir/write_dump.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/i386-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/i386-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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--allow-run-as-root --oversubscribe /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src/liggghts < in.heatGran -LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2025-02-13-13:52:15 by pbuilder1, git commit unknown) +LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2024-01-12-07:35:36 by pbuilder2, git commit unknown) Created orthogonal box = (-0.05 -0.05 0) to (0.05 0.05 0.15) 1 by 1 by 2 MPI processor grid Fix particledistribution/discrete (id pdd1): distribution based on mass%: pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% -Setting up run at Thu Feb 13 13:55:09 2025 +Setting up run at Fri Jan 12 07:40:35 2024 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps @@ -3508,17 +3543,17 @@ insertion: proc 1 at 10 % insertion: proc 0 at 10 % insertion: proc 0 at 20 % -insertion: proc 0 at 30 % insertion: proc 1 at 20 % +insertion: proc 0 at 30 % insertion: proc 1 at 30 % -insertion: proc 1 at 40 % insertion: proc 0 at 40 % -insertion: proc 1 at 50 % +insertion: proc 1 at 40 % insertion: proc 0 at 50 % -insertion: proc 1 at 60 % +insertion: proc 1 at 50 % insertion: proc 0 at 60 % -insertion: proc 1 at 70 % +insertion: proc 1 at 60 % insertion: proc 0 at 70 % +insertion: proc 1 at 70 % insertion: proc 1 at 80 % insertion: proc 0 at 80 % insertion: proc 1 at 90 % @@ -3528,14 +3563,14 @@ INFO: Particle insertion ins: inserted 889 particle templates (mass 1.906603e+00) at step 1 - a total of 889 particle templates (mass 1.906603e+00) inserted so far. 1 889 0.0858673 0 5719.8098 0.0015 -Loop time of 0.0141763 on 2 procs for 1 steps with 889 atoms, finish time Thu Feb 13 13:55:09 2025 +Loop time of 0.0284209 on 2 procs for 1 steps with 889 atoms, finish time Fri Jan 12 07:40:35 2024 -Pair time (%) = 1.98825e-05 (0.140251) -Neigh time (%) = 0.000378515 (2.67005) -Comm time (%) = 0.000184979 (1.30485) -Outpt time (%) = 2.4772e-05 (0.174742) -Other time (%) = 0.0135682 (95.7101) +Pair time (%) = 3.51735e-05 (0.123759) +Neigh time (%) = 0.000618769 (2.17716) +Comm time (%) = 0.000271692 (0.95596) +Outpt time (%) = 4.78755e-05 (0.168452) +Other time (%) = 0.0274474 (96.5747) Nlocal: 444.5 ave 446 max 443 min Histogram: 1 0 0 0 0 0 0 0 0 1 @@ -3548,7 +3583,7 @@ Ave neighs/atom = 1.52418 Neighbor list builds = 1 Dangerous builds = 0 -Setting up run at Thu Feb 13 13:55:09 2025 +Setting up run at Fri Jan 12 07:40:35 2024 Memory usage per processor = 7.99957 Mbytes Step Atoms KinEng rke heattran Volume @@ -3573,14 +3608,14 @@ 18000 889 2.0608503e-05 8.4041706e-06 5719.8098 0.0015 19000 889 7.1847902e-06 5.7384807e-06 5719.8098 0.0015 20000 889 2.5428841e-06 2.021589e-06 5719.8098 0.0015 -Loop time of 10.4437 on 2 procs for 19999 steps with 889 atoms, finish time Thu Feb 13 13:55:19 2025 +Loop time of 23.6336 on 2 procs for 19999 steps with 889 atoms, finish time Fri Jan 12 07:40:59 2024 -Pair time (%) = 3.27954 (31.402) -Neigh time (%) = 0.0737756 (0.70641) -Comm time (%) = 0.937813 (8.97968) -Outpt time (%) = 0.116197 (1.1126) -Other time (%) = 6.03641 (57.7993) +Pair time (%) = 7.37383 (31.2006) +Neigh time (%) = 0.098844 (0.418234) +Comm time (%) = 2.05898 (8.71207) +Outpt time (%) = 0.253931 (1.07445) +Other time (%) = 13.8481 (58.5947) Nlocal: 444.5 ave 889 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 @@ -3595,7 +3630,7 @@ Dangerous builds = 0 Setting atom values ... 442 settings made for property/atom -Setting up run at Thu Feb 13 13:55:19 2025 +Setting up run at Fri Jan 12 07:40:59 2024 Memory usage per processor = 8.29655 Mbytes Step Atoms KinEng rke heattran Volume @@ -3630,14 +3665,14 @@ 48000 889 3.9966529e-09 1.8327843e-08 10459.51 0.0015 49000 889 3.9981496e-09 1.8327955e-08 10459.51 0.0015 50000 889 2.0362479e-09 1.7303876e-08 10459.51 0.0015 -Loop time of 18.593 on 2 procs for 30000 steps with 889 atoms, finish time Thu Feb 13 13:55:38 2025 +Loop time of 42.5452 on 2 procs for 30000 steps with 889 atoms, finish time Fri Jan 12 07:41:41 2024 -Pair time (%) = 5.96117 (32.0614) -Neigh time (%) = 0.000461323 (0.00248116) -Comm time (%) = 0.018634 (0.100221) -Outpt time (%) = 0.185507 (0.997724) -Other time (%) = 12.4272 (66.8382) +Pair time (%) = 13.4639 (31.6461) +Neigh time (%) = 0.000592287 (0.00139214) +Comm time (%) = 0.122225 (0.287283) +Outpt time (%) = 0.407524 (0.957861) +Other time (%) = 28.551 (67.1074) Nlocal: 444.5 ave 889 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 @@ -3654,14 +3689,14 @@ mkdir test cp -r examples/LIGGGHTS/Tutorials_public/heatTransfer_1/* test/ cd test; /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src/liggghts < in.heatGran -LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2025-02-13-13:52:15 by pbuilder1, git commit unknown) +LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2024-01-12-07:35:36 by pbuilder2, git commit unknown) Created orthogonal box = (-0.05 -0.05 0) to (0.05 0.05 0.15) 1 by 1 by 1 MPI processor grid Fix particledistribution/discrete (id pdd1): distribution based on mass%: pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% -Setting up run at Thu Feb 13 13:55:38 2025 +Setting up run at Fri Jan 12 07:41:42 2024 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps @@ -3681,14 +3716,14 @@ INFO: Particle insertion ins: inserted 890 particle templates (mass 1.908748e+00) at step 1 - a total of 890 particle templates (mass 1.908748e+00) inserted so far. 1 890 0.085963889 0 5726.2438 0.0015 -Loop time of 0.0171601 on 1 procs for 1 steps with 890 atoms, finish time Thu Feb 13 13:55:38 2025 +Loop time of 0.0316654 on 1 procs for 1 steps with 890 atoms, finish time Fri Jan 12 07:41:42 2024 -Pair time (%) = 3.6806e-05 (0.214485) -Neigh time (%) = 0.000704891 (4.10772) -Comm time (%) = 9.345e-06 (0.0544576) -Outpt time (%) = 2.2607e-05 (0.131741) -Other time (%) = 0.0163865 (95.4916) +Pair time (%) = 6.2546e-05 (0.197522) +Neigh time (%) = 0.000884489 (2.79324) +Comm time (%) = 1.4193e-05 (0.0448218) +Outpt time (%) = 3.445e-05 (0.108794) +Other time (%) = 0.0306697 (96.8556) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -3701,7 +3736,7 @@ Ave neighs/atom = 1.54719 Neighbor list builds = 1 Dangerous builds = 0 -Setting up run at Thu Feb 13 13:55:38 2025 +Setting up run at Fri Jan 12 07:41:42 2024 Memory usage per processor = 8.0355 Mbytes Step Atoms KinEng rke heattran Volume @@ -3726,14 +3761,14 @@ 18000 890 1.115964e-05 5.0891708e-06 5726.2438 0.0015 19000 890 8.6317273e-06 5.1602134e-06 5726.2438 0.0015 20000 890 3.5313037e-06 2.2976158e-06 5726.2438 0.0015 -Loop time of 10.346 on 1 procs for 19999 steps with 890 atoms, finish time Thu Feb 13 13:55:49 2025 +Loop time of 21.1678 on 1 procs for 19999 steps with 890 atoms, finish time Fri Jan 12 07:42:03 2024 -Pair time (%) = 6.4476 (62.3196) -Neigh time (%) = 0.135251 (1.30728) -Comm time (%) = 0.0134026 (0.129544) -Outpt time (%) = 0.169328 (1.63665) -Other time (%) = 3.58044 (34.6069) +Pair time (%) = 13.3183 (62.9176) +Neigh time (%) = 0.155412 (0.73419) +Comm time (%) = 0.062151 (0.293611) +Outpt time (%) = 0.254517 (1.20238) +Other time (%) = 7.37746 (34.8522) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -3748,7 +3783,7 @@ Dangerous builds = 0 Setting atom values ... 445 settings made for property/atom -Setting up run at Thu Feb 13 13:55:49 2025 +Setting up run at Fri Jan 12 07:42:03 2024 Memory usage per processor = 8.32421 Mbytes Step Atoms KinEng rke heattran Volume @@ -3783,14 +3818,14 @@ 48000 890 9.2079131e-09 2.6866978e-08 10498.114 0.0015 49000 890 5.774488e-09 2.5126969e-08 10498.114 0.0015 50000 890 5.8549287e-09 2.0714114e-08 10498.114 0.0015 -Loop time of 18.5445 on 1 procs for 30000 steps with 890 atoms, finish time Thu Feb 13 13:56:07 2025 +Loop time of 37.6562 on 1 procs for 30000 steps with 890 atoms, finish time Fri Jan 12 07:42:41 2024 -Pair time (%) = 11.811 (63.6897) -Neigh time (%) = 0.00267721 (0.0144366) -Comm time (%) = 0.0143474 (0.0773671) -Outpt time (%) = 0.270229 (1.45719) -Other time (%) = 6.44632 (34.7613) +Pair time (%) = 24.0199 (63.7874) +Neigh time (%) = 0.00307136 (0.00815632) +Comm time (%) = 0.0844098 (0.224159) +Outpt time (%) = 0.389381 (1.03404) +Other time (%) = 13.1594 (34.9463) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -3809,7 +3844,7 @@ dh_testroot -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_prep -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_auto_install -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build - cd debian/build && make -j16 install DESTDIR=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd debian/build && make -j7 install DESTDIR=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -S/build/reproducible-path/liggghts-3.8.0+repack1 -B/build/reproducible-path/liggghts-3.8.0+repack1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/CMakeFiles /build/reproducible-path/liggghts-3.8.0+repack1/debian/build//CMakeFiles/progress.marks @@ -4338,14 +4373,14 @@ dh_shlibdeps -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_installdeb -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_gencontrol -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build -dpkg-gencontrol: warning: Depends field of package liggghts-doc: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package libliggghts-dev: substitution variable ${shlibs:Depends} used, but is not defined +dpkg-gencontrol: warning: Depends field of package liggghts-doc: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_builddeb -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dpkg-deb: building package 'libliggghts-dev' in '../libliggghts-dev_3.8.0+repack1-7_i386.deb'. dpkg-deb: building package 'libliggghts3' in '../libliggghts3_3.8.0+repack1-7_i386.deb'. -dpkg-deb: building package 'liggghts' in '../liggghts_3.8.0+repack1-7_i386.deb'. dpkg-deb: building package 'libliggghts3-dbgsym' in '../libliggghts3-dbgsym_3.8.0+repack1-7_i386.deb'. +dpkg-deb: building package 'liggghts' in '../liggghts_3.8.0+repack1-7_i386.deb'. dpkg-deb: building package 'liggghts-dbgsym' in '../liggghts-dbgsym_3.8.0+repack1-7_i386.deb'. dpkg-deb: building package 'liggghts-doc' in '../liggghts-doc_3.8.0+repack1-7_all.deb'. dpkg-genbuildinfo --build=binary @@ -4355,12 +4390,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/6399/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/6399/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/46812 and its subdirectories -I: Current time: Thu Feb 13 01:56:46 -12 2025 -I: pbuilder-time-stamp: 1739455006 +I: removing directory /srv/workspace/pbuilder/6399 and its subdirectories +I: Current time: Fri Jan 12 21:43:34 +14 2024 +I: pbuilder-time-stamp: 1705045414